|
|
Homology
BLAST of mRNA_S-dermatodea_contig1180.1141.1 vs. uniprot
Match: A0A6H5JK26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK26_9PHAE) HSP 1 Score: 221 bits (564), Expect = 3.040e-65 Identity = 171/398 (42.96%), Postives = 223/398 (56.03%), Query Frame = 1
Query: 1 MMASLRAKSGGGGKRSGNGR--LIRKDSLQSQDDSKVGKSRMGHGEQAMAWNASLSFDKAPEAGN-VNASSSSTSPETDPGTSDLFPFF--------KGVFHPEAAANTF*AGGAGVDDGHSSEEEKQQLLRSGENSHGLAASRRKGKGEGS-----YRNPMFHSANSSVERAVASLFPGDD--QAVRAATNKSNPMFDRAVSAEAPPRPR--PKAKRDKPRRSNSAKEVTTTANEENGVLELVRSKSVGAKDAKKDSKGDQVKKKKDKEKAMYEHVGRMNVRPFRDDVAD--EEVEHIDGFRVDTFARNEGESGGKAHFKFVFTVDKGELPRLPPSCVEVEKKSRPVLDAVHERDTGNLRIRVNDGREIGAKNSAAVEIALANVGVVLFNPRTMVGG 1128
MMASLR + GKRSG+GR +R + S +G+ + G G QA AW +SF+K VN SSSTSPETDPG S +FP F + A ++ G G D + E L + S K K + +RNPMF +AN + E+A+ASL+P D ++ R+A N SNPMF R+VS PRPR P+ R S+ K V + + G + G++D K+ + ++ K K +K +YEHVGRMNVRPF D +D + V GFR+DTFARNEGE+GG AHFKFVFT+D +P E KK+RP+LDA+HER TG LR+RVNDGREI SAAV+IA+ N+GVV FNPRTM G
Sbjct: 1 MMASLRGGTTARGKRSGDGRERRLRHERAASMP---LGRPK-GEGMQASAWRT-MSFEKLQNTSKCVNNCSSSTSPETDPGASSVFPSFVEEDNVGEEEELSASAGSSKDMVEGRGGDQTRARGAEGGGLSKLSRRPAAEKKSAAKSKSQAQLVKMDFRNPMFRAANGNAEKAIASLYPAQDSEESTRSAMNGSNPMFKRSVSDAGRPRPRENPELSRGGGG-SDLGKSVAADSKGKGG-------EDNGSRDEKQQPRKEKGKSKDKTKKPLYEHVGRMNVRPFLSDPSDANDYVSGHRGFRLDTFARNEGETGGTAHFKFVFTLDGAAVPDEG----EDAKKARPMLDAIHERATGKLRVRVNDGREISTTESAAVDIAITNIGVVFFNPRTMSKG 381
BLAST of mRNA_S-dermatodea_contig1180.1141.1 vs. uniprot
Match: D7FMS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS3_ECTSI) HSP 1 Score: 158 bits (399), Expect = 5.680e-43 Identity = 106/216 (49.07%), Postives = 131/216 (60.65%), Query Frame = 1
Query: 520 NKSNPMFDRAVSAEAPPRPRPKAKRDKPRRSNSAKEVTTTANEENGVLELVRSKSVGAKDAKKDSKGDQVKKKKDK-----------EKAMYEHVGRMNVRPFRDDV--ADEEVEHIDGFRVDTFARNEGESGGKAHFKFVFTVDKGELPRLPPSCVEVEKKSRPVLDAVHERDTGNLRIRVNDGREIGAKNSAAVEIALANVGVVLFNPRTMVGG 1128
N SNPMF R+VS PRPR P S G +L +S + +K + KG +V++++ +K MYEHVGRM+VRPF D A++ V GFR+DTFARNEGE+GGKAHFKFVFT+D G +P E KK+RPVLDA+HER TG LR+RVNDGRE+ SAAV+IA+ NVGVVLFNPRTM G
Sbjct: 2 NGSNPMFKRSVSDAGRPRPR-----TNPELSRGG-----------GGSDLGKSLAADSKGKGGEDKGSRVEQQQPXXXXXXXXXXXTKKPMYEHVGRMDVRPFLSDPNDANDYVSGHRGFRLDTFARNEGETGGKAHFKFVFTLD-GVVPGEGEG--EESKKARPVLDAIHERATGKLRLRVNDGREMSTTESAAVDIAITNVGVVLFNPRTMSKG 198
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-21_000360.1 |
| Exons | 6 |
| Model size | 1128 |
| Cds size | 693 |
| Stop | 0 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1180.1141.1 >prot_S-dermatodea_contig1180.1141.1 ID=prot_S-dermatodea_contig1180.1141.1|Name=mRNA_S-dermatodea_contig1180.1141.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=231bp
MFHSANSSVERAVASLFPGDDQAVRAATNKSNPMFDRAVSAEAPPRPRPK AKRDKPRRSNSAKEVTTTANEENGVLELVRSKSVGAKDAKKDSKGDQVKK KKDKEKAMYEHVGRMNVRPFRDDVADEEVEHIDGFRVDTFARNEGESGGK AHFKFVFTVDKGELPRLPPSCVEVEKKSRPVLDAVHERDTGNLRIRVNDG REIGAKNSAAVEIALANVGVVLFNPRTMVGG back to topmRNA from alignment at S-dermatodea_contig1180:354..17138- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig1180.1141.1 ID=mRNA_S-dermatodea_contig1180.1141.1|Name=mRNA_S-dermatodea_contig1180.1141.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=16785bp|location=Sequence derived from alignment at S-dermatodea_contig1180:354..17138- (Saccorhiza dermatodea SderLu1190fm monoicous) ATGATGGCGTCGCTGAGGGCGAAGTCGGGAGGGGGAGGGAAACGCAGCGG
GAACGGTAGGCTTATCCGAAAAGATTCGCTGCAGAGCCAGGATGACTCAA
AAGTTGGTAAGTCGAGGATGGGGCATGGTGAGCAAGCTATGGCGTGGAAC
GCGAGCCTGAGCTTCGACAAGGCGCCGGAGGCGGGAAACGTCAACGCGTC
CTCGAGCTCAACGTCCCCCGAGACGGATCCTGGGACTTCGGATCTGTTTC
CATTTTTCAAAGGTGTGTTCCACCCAGAGGCCGCAGCCAACACGTTCTGT
CTGTTTCATAGATGCGCTACTGCTGTATTCAAAAAGTCAACACATTTTAT
TCATGAATATGGCTTATTCTCGGTTTGGAATTTGGATTGATTGGTGGATT
GATGATGGTCTCCGACCATGCGCTTTGCTCTACAAGTACCGTGTGGCGCT
TGCCATCAGCGCCTCAGAGGCCTCATAAGCGATTCCACAGTCCCACTGCC
CTGCGCAAATCCTGGACCTTCCGCAGAGCTCCGCGGGCACGTATGTTTCC
GCTGTGCACGGAGGAATGATGGGTATATATTTCGGTTTGAGATCCGTTTC
GCTGTTCGTGCTTCGTGCTCGACCTAAAAGGCTGTAGACGATATTCTTAG
CTTCTTCCGATATTTTTTGGTACAAGTAAAAACAATACAATAGACAAGAT
GCAACCAGTATGGCGGTCGTAACAGCTTTTGAGAGGTGAACAGCACAGAC
AGCAACCAGATTGAGGAATGCAGCAAGGCGGGGCCGCCTACTGGCTGGTG
ATCTGCTGTGTTGCGAGAGAATGCGCCGCTTTGATCTCGAGAGAGGGCCT
GGCTTCTTCGCTCCCGTTCAGCCGTCAAATGCGTGTATTTCGGCCCAGGC
GTTCTGTCCGTGAGCGTGTGGATGAGACGGCGGGAGATGTTTGTCCGCGG
AGCTTCCTTCCAATTTGCTGTGTGTGAGCCTTTGGAAAAAGACCTATACT
TAATATTAAGTATAGGTCTTTTTCCAAAGGTGTGAGCGTCCTCTCTTAAC
GCACTTATCTATACTGTATGATTTATGTTAAGGTGTGATATGGTGGTATT
ACACTGCTACAGTATTTATAAGGCCTACTGAATAAACCCTAGTGTTTGCG
TTATGAAGCAATCCAGCTTTCAACCTCGCACAATCCAGCTTCAAGCACGG
GCAATCTATTTTCAAAAGACGCTTGCTTGCCATATCTAACAAGCAGGCAC
TTTACGTATTAGTATTATCACAAGAGTGTATACTATGCACAGCATACATA
GCGATCCCACCTCTTTACAGACGTAAAAACACACCTTTATGTCTAATGTA
CCTGCACCAAGGAATCCTTCAACACCACGCGTGGACTCCCGTCAGGGTCT
ATTAATAGGTATAAGTGATCCATAGGTATATACTCTGTATATATTTTTTC
TATCAAACAGTCAGACCTTCGCCCGGCGGTCTGCTGTTCGGTGCCAGCTT
TTAGATGCAAAGGTCTAGAGATCGTATATTATTATAGGACAAGCCCAGCC
CCTTAGGTGTCATTTTTGTCACCTCTTTCTTTCTTAAATCCTGCCAGCAG
GGGGGCACGGCAGGGATCCAACATCCAACCCACCCGCCTTTCGCCTCCTC
CCCCCCCCCCAGCCGTGACTCCGCTTTGTTTTGATTCTATCATATTGTGA
TATCATCAAGCAATCAATCAGGCACGATATCAATGATGTTGTTCTCCGCA
TGCCGCAACCTTCGGCCGTACCATCCAGAGGCGGGGGGGGCAGGGGTTGA
TGACGGACACTCGTCTGAGGAGGAGAAGCAGCAGCTGCTGCGATCGGGGG
AGAACTCGCATGGATTGGCGGCGTCGAGGCGAAAGGGGAAGGGGGAGGGC
TCCTACCGCAACCCGATGTTCCATTCGGCCAACTCCAGTGTAGAGCGAGC
CGTTGCGAGGTCAGTTCCTGTTTTTTTTTTTTCCTGCCGACAAAATGTTT
GTTATAGATGGGAAATTGATCTTGTGATTGGTTTGGAGTGGCAGGGATTG
GGCGTGGCGCGTCGCCAAGACTTAATTTGAGAGAAGACGGCAGTACGGTG
CTGTAGTTGTATTCATACGAAGTGGACGGATATCACATCATGTGTGTTTG
CTCTTGTGTGTTCCGGAGCTGGTGAAAAACAGCCCCCCCTCTTCCCACCA
GTATTATAATAGTGCTCACACTATACTAAAACACTTGTATCTGCATATTA
TAGTTTATGTACACGTGGGTCTTTGGCTCTATAGACGATGATGGAGAGAC
CTCAGAACGTATTATAGTTTTCTGTCGCCTCTTTATATCACATGATAACA
ACTAATCACACGTTCGCACGCTGATGGAAAGCTTCTTCATTTCTGGCTAA
ATGTCTGGTCTCTGTTTGATCAAATCAGACTTTTATATATATTGGTCAAA
ACTGCTGGTATGCCCAAGTGGGTGTGTGTGGGTTCAGTCTCCCCTCCCCA
CACCCCCACTTCTGCGTTGCCTTGTGCAGCTAGTAGCGGCCGGTCGGCGA
AGAGCTTGATCGAAGAGCTCGGCGTGCGTTTTGCATGGCATGTTCGCGTG
ACAGACACGCTTCGCTCAAGTTTTCATTTTTGAGAGGAGATCCGTTTTGG
GGGCCTGGCCTAGCGATCGTCTATCATTGTTCCGATCTGCCACGCGCAAT
TTGCATACTCTATAGCTCTATAGAAGTCATTTTTCCTATTAATATTAGAG
ATTGAATGTTATTGTTCATGAAATGGTTCACTGCTGACTACGGCTGTACA
TATTAATCATACAATAGTGCTTGTGAGTTAGGGATGTACATGGGAACTAG
ATTTTACTTTTTATAAATAGAAAATATGTTGTGTGGGATGGTTGCTTCGT
AAATTCCATTCTAGGAGAGGAAAAGCCCGACACTCGCGTGCTATTGATAT
GCATGCGCCTATGCATGCATGCCGCCGCTGAGCCACAACGGCGCGCTACG
GTCGCAACGTCGCGACCGCTAGAGCTTTGGTAGCGGCAGCTAGCTGTCGT
CGCGGTTCGTTTTAACCCCGACTCAAATCGTGACGTCCGGAACGCTTTGA
CGTGCCGTCCTCTCGAGTAGTGAAGCGAATGGCTTGCTTCATATCCTCGC
TGTCGCCAGGTGAGGAAGCGAATGGCGGCAGTTGTAGGCAGGTGTCATAC
GGTCGGTGCAGGAACGGTCTTTTGGTGCTCTGTACGCTAGGTATCCCTGC
CCCCTAAGGCGATCCTTGTGTCACCCCCGCGCTGCAGCCTTTGGGGAGGG
CCGAAAACTCTCCAAGCCTCCAATATATTCTCCTTTTCCGTTACAATGAC
ACACGCAAGACACATTACACAGCTATACACGTGGCTAAATACAACTATTA
TAGCAGACGCTTTTACGTTTATTTTCATACGCAGACTACGACTGCTGCAA
TATAGACGAGCGCGACGCACGATCAATTAATTAACAAAACGTTCTCCCAG
TTGTCACACGAAGTCGGGGCTAAGGGTTGACGCAATACGTGTATATTGTC
ATATTATCTTCTATCGATATATATATCATATCCTGTGTATTTTGCGGAGC
TTGACAGCCCTTTTGTTCTCAAGGGTCGGAGGGCTGCTCTCTGAGGCACG
GCGCGGGCACCGCCGCTCGAGAAGATCGGTGGCTCTATTCATCGCTTCCT
GCGTCCTGAGGGGCCTATTATACTATGTATGATGTGCCACGCAGAAGTCG
TGCACGTTCAACAACACCCCGAGAAATATGGTAGGAAATAGACCTTGCTA
CAACAAACCCCTTAAACTTCTGGCGCGTCTGAACGGCTATCCAGAGACAC
AACAATCAGTAGTCTAGAAGTCGTGAAGAACTCCATTTGGGTTGAACTGG
AGTCACTTGATACGTGGGGAATAAATTCCACGATCCTCTTATTGTATCGA
AGTTAACGGAAGTTCTCGTGTACATAATCGTCTATACGCATTATCTATTC
AGTACTCGCGGACGATACAAACCAAACATTGAACATTGCCTATTAAATGT
CTTTACACTTTCCGTGCACCAGACCGCGGGTTCAGTGCCTTTAGTATTTT
ATGATACAGTACTCTGTAGCTTTTCCAAGTCCTTGGCGTTACTTTATTTA
TGCACGTGGCACTCTCATCGCTTAATACTGTATTAATAGCAGTTAATACT
TGTATGAAAGGCTCTAGAGGTCTACATACAGGCTTCACGTTTCACCCCCC
TCCAAGGTTTTCCCGCTGAGTTGCCCCTCCCCCCGCTCCCCCCGTCCTCC
GCGCTCCGGCGCCGCTATCATGCTAACGTCGTGTACGATATTTTCAACGG
CACAAGTGCAGTATATACAGCATGACATGTACGTTAAGAGCTGTATCATA
CAAGGTACGTATGATCATAGCCACGAATGTTTGGTGTACTGTATATGTCT
TGTTGCTGTTTTGTGAGGTTGGTTTTTGGGGGGCAACACGATGCTGTCGC
GGCCTGTCTCGTTCTTTTTGTTCCTCGAAAGGCAGCAATCAATCAGCCAA
GGACACCCGCCGCCACCGCCCTTTCTCTTCGTGACGTATGTACTACTCTG
TACCTGCATTCTGTCTATAAGCCGCTGCCCTGCCCTGCCCTGCCCTTCCG
TGCTCTCACGCACCATAAACATACCTGGTACGATTCATTATTTCTATTAA
TAGTGTTGGCATTGCGCTCGTGCCACGCATGCTTGATGTACTGACAGTTG
TAGTGACGACGATGTTTCTCTCTTCTCTCTTCCCCTTGGTTCGCTTGGCC
TGCGTCGTGCGTTCGCAATCGCAATCGTTTCGTTATGGCGCGACCCTTGT
GCTTTGGGCTTCATGCTTCGGGGTGTGGGTGGGCGGGGTGCGCGTGGGCG
TGGTTACGCTTTGTGGGTCAGCTTGTTTCCTGGGGACGATCAGGCTGTGC
GAGCAGCGACGAACAAAAGCAATCCGATGTTCGATAGGGCCGTGTCTGCT
GAAGCTCCGCCACGTCCCAGGTCAGCTGTAGTTAGTATGTTGCGTGTGGA
AATCTCTAATATATTCTGTGTGTACGTACAGTGTATGACGTATGTGAAAC
ATGTACCAGGTAACAATAGGTTGTAGGCACTATGCTATTATATTATATTA
AAATAGGAGCGCTCTTGGCAGGCGGTCCGGAGATCCAGGATGGTCATTCT
CCCGATTGCAGATTGTGTTGCAAGTTTTTCCGTCATGTTTTTGCTCCCCT
CCATCCCAGAAATTAAAAATCCCAGAAAAGGCAAACTCCGTATAATACGA
TCTGCTATCGTAGGAAATGTTTCGGTTATACAAGCGTGGGCAGATGGCCC
CGAACACTATCATATCGTAGCCCACCGCCGTATCATCAAATCATATCGTA
ACGATGCTGCCATACCATACTGGACTTGGTACTGTACGTGTGTTATTGTT
TCTGATACTTGTACAGTACATGACAAAGTTTCACACAGCAGCAGTACATG
AGTATCGTATGGGTGTATCGATTGTTTTTTCGTTGCGGCAAGTTGGTATT
CCAAATCCTTTTATGATGTACAGCAGTAGACCTATGATACTGCTGTACAA
GGACAATACTTCGTTTGGTGATGTTTTTTTCGTGAAATTGCGGGTGACGA
TACGGCTACAGTAGTATTACAGCACCTACTACTCCTTTCTCTGTCTTGAA
TGATATATACTATCATACAAGTATTAATAGTCAGTAATGCTGTACATGTA
CAGGGCATGGTGTTGCTGTCTGTTGCCGTCACGATGATCCTTTGCGGCCA
TGTAATACAGTATCATGGATACATGGAGATTACCAAAGATAGCTCGATAA
ATACCAGTAAATACCCTGATAAATACAACAAGTCCAGCAGTTGTGTCATT
TCTCATATCATATCATATAATATGTACGTGCAAGCATTGTGAGCCTCTTG
CGAACAAGACAACCCGGAAAAGCAACTATTTAATATAGTACTGTAGTAAT
ATTATACTGCAAGTCAGTTGTCTGTACATACGTATGTGATGTGCGTAACG
CGGGTACCGAAACAAGATATCATACTTACTGGCTTTCCTGGCGAAAAATC
TTTCAAAAACTGAAACAAGAATAAGAATTGCCTCAATGATGGAAGAATCA
AGTATTTAGTATTAGTATTCCCGTCAGATGCTACAAACGAAACCAATGCT
TGCGGATATAATTGGGGTAGACATGCACCGTGCGACAAGACCAAACACAG
AATTGCCGCGAGATGAAACGAGCTGCGAACGAACCACAAAAAGTACCGCT
CGATGCTCGGTCTCACCCTCACACTCAGATGCCACGTGTGCCCTCAGGCA
CGCATCAGGCCGGGGATTTAACTGATTTAACTGCATCACCGACGTCAATC
ATGTCCTATGAATATTATAGAAGTAAACCCTTAGGAGTGGAATCCGTTTT
TCGCCAGAATTTGTCGCTTAGTCCCTTAGAAGATGGAGGATAGAGCTATC
GCGGTGATGGGATGCATGTACGAGTGCATCGCCGTATGTGCACGCTACGC
GTGGTAGGGTAGCGTTGAGGTTTCATCATCAATTTATCGTCAAAACCATT
CTTCTGCCGCCGCTACGGCGAGGATTAGCCACCGTCGTTCGGTCGTCGCC
GTTCGATGTCGAAAACGGCGCGTGCAGGTGACCTCGAAAAGCGGAGCCGG
CCTTAGTCGAGTCGGCCCCGGTGCTGCGTTTTGTGCGCATCATGTGTGCG
TTGATGTGTTGGCGTACGAATGGCCTGGCTGCTCAGAGTCCGATTCCTGC
CTGTGGCCTGTGGTGACGAGGATCGACCAATCCGTATACAGCTACTGCTA
CAAGTGTATGAGCGGCACAGCACACATGCCTTACATTTTTCACTATATAT
TAGTATCGCGAATTGAGTGCATTGGGTTCGTTTTATGTTCGTGCAGCACT
CTGTCTCCGGCAGCCAGGCCCTCTCGCCCCCGCAGATTTGACGGATAAAT
ACTTATAATGAAATGAAGACCCGTATCATGTTGGTATTATTTTATGAACA
CAACGTTGAAATTTCAACCCGCTGTTCAGCAGTACTACTTTGTATGATAC
CTGGTACTATTAATAAACTACCAATCGATGAGAGCCCAGGGGGTTTTGAA
CGGCGGGGTCTACTGGACTCTGTCTTTGAGTATGGGGGGTGCCTGTAAAT
GAGATACAGCAGTATTATTATACAACAGTAATCGTAATGGTGTGTGAGAG
TGGTCGTGCCTAATATTTCGGAGAAAAAGGGGTGGGCGATCTGAAGCGTT
TCGCCCACCCCGATTGATTGATTGATTGATTGATTGATTGATTGATTTGC
ACCGATGCGCGACAATAATCGAACCCAAGTTATTGAGACGAAATATGTTA
ATTGTATACAATACTTCGAAGTACTACTGTAGTACAGAGGAAGCATATTA
ATTAAACCTTTTTGAACCGAGTCCGGTTATACGCCGAATGTGGTGACTAT
TATACTGACTACTGACTACTCTGTCTACGGGTTAGTGGTGATGCAATAAC
GGCTACACGCACGAGCGCACCGCACCGTGCATGCGATGCGATGCGATGCG
AGCTATGAATAAGCGTGGCACGAGGCCGCTCTTGTGCTATTAATACTGGG
CTACCGCCACTACATACAGTGTAGTACAAGTATAATGCCGTGGTTGAGTT
ACAGTTAGTATCAGGTAGCTGTTCGACGCGAAATAAGACGCGGACAGCAG
TGTCTTCTATAATAGCGTTTTTCTATATCTGGGGTACTATTTCTTATTTC
TTTTATTTCTTGTATATACCATATTTAAGTACCAGGGACGGCATGATGCT
TTGGAAAAATACTACCAGTATTATACTGTGTATATATAACCATTATAATA
TACCAGCAGTATTTTTCCAAAGGTACGACGGTGTATAGTAGAAGTCGAGT
TCTGATTATGTATTTTTCTCCTTGACTCTTTGCGTATCTGACCACAAGTC
GGGTCGAATTAAGCCGATCGACTATACGTGTGCAAATCAATCAATCAATC
AATCAATCAAATCAAGGTGGCCTAACCCCTTAAACCTAACACGGACTCAG
TCTCAACACTATTATTAATAGCAGAACACTGAAGGAAGAACAGCGGTATC
CATGACAGAAGACTTTGGGAAATTACCCCTAATAATTTTTCTGTGGGGGT
CTTGATCCAAAGTCTGGGAGAGACTGAGAGACGGGATGATACTGGTGTCC
ATGGCTAGGGTCCCTATTTACCACTGACGGGACCATTCATTGGGATAAGG
CCGGTCAGTCCTACGCGAGCCACTCGCCCTCGCAGACTACTGTATCATAT
CATACTAAACATATAATAATGTGTCGAACATAGGCAGTCGCGGGCGATGG
CCAAGGGATTCCCAGGACAGCAATAATGCCTTGCGGTGATGGAAGTGTGT
TCGGCTTGGGGTTGGGCGAATTGTTGCCTGGTCATGGTAAAAAAAATTGC
GAAAGCGTGCTTGGAAAAAAGAGAGAACACTAATGTGCGATTTTCCACCT
GCTTATGATGCACGTGCTTGGAAAGAAAAACAATGGGCGATTTTCAACCG
GCGTATGATAAAAAACGCAAGTTATGCTTGTTGTACAAGTGGGACCCTCA
AATTGCGAGAACCTATCAACAACGTATGATAGGCGACAACGATTGAGGGT
TTGCGGGTGTTGGGGTTGCATGCGTCGAACGAACGCTTCTCTTTTTCAGT
CGCTCTACGTAGTTTTCCTATCCGGTCGGCTCTTAGTAGCAAGGAAGCAT
TATGTCTTCCAAGCAGCGAATCGGCGATAATCCATTTCGATTAATGGTTT
TTATCGACAGCACCTTCGCGCATGCAGAATCATAACTACGTGCAATTTTA
TCGTAGTGGTCGGACTGGTCGCTGATAGACGAGGCTCGTGCGCTTGGGTA
TTGAGCGATCTCGCATCTCCCTGTCCCCGGCCGTCATCGCCGGACCGTGA
TTTTACTTTAAGCCGACGGAATCGGGTGCGAAGGCTGGTTATTGTTCATT
GCACCGGTGCTGCGGGGGCGCTGAATGAAAAGCCCAATGCGCCAATGCGC
GGTTACAGTGGAAAGGCAAAGGTTAGGAGCTGACATAAATTGGATCAAGG
GTTTGGATGGGGACATCGCATGAGATAACTCCGCTCGGACCGCCGGCGGG
ATTATGTGGCCCTGAGTAGGCCAATCGGCGGAATCGTGGCGGAAAAATTA
TGTTGTATCAATGATTGTATATTACTTATATTGTAATTAAGCGTCACACT
TGAGTCCAATAGCTCTACAATGAGAGCATACCTGGTCTTATATTAATAGT
ATATAATACTATATGTGCCGCCTTGACCACCGCACGCCCGGTATCGAGCA
GAACAGTCCGCAGCGCCGCGGCAGCTGTAGCCTGGACCCTAAGGACCTTC
AAGTCGCCCATGGTAGGGTCACTCACTGCCTTGCAGTATGATAATTTGTT
CCCTACAAGTATGCATGTCATGTAATCGTCACGACTGGTAGTGTACTATT
AATAGATCTATGTATCAATACTATTTTATTAATTTTACTATTATTGATAT
TTTTATATTGCGGTAGTAGTGTAAGTGCGTCACCGTGTCACCTTGTATGC
AAACTAGGCGTGGCTGGGAGGCGTTTTCCTACCGCCAGTTCGGCCAAGAC
CAGCCGCGGTTCGTTGGCGGTTTAGCCAAGTATTAATGTCATTTAATAAC
TATTTTAGTAGGTTTAAACTATTAATAGTATGATAGGCACGGCTACGCCC
GTGAGGTGTGCGTGGTCGCTCAACCATAGAATCAAATTGTTTGGCGCTCA
ACACAAACATGAAGTTTTTTTGCGTCAAAATCGTATAGGAATTTAGTTGA
CAAAATTGTATAGGAAATAGTATGGAAAAGGCGTTCTAAAGCGGTATTGA
TGACTAAAACATATTGACAAAACGACGCCCACAAAAAAAGACGGGGGTCC
CAAAACGGGTATCTGATTCGTATGATAGGGGAGAATGGCTGTTGTGCGAC
CATGGAAATCTATGTACCAGGTATCAATCACACCTACAATACTGGCTTGA
TGATTGATGAGGATTGATGATGATGACATCAGCCATAAAAGTTTAGAAGG
TGGGATCCCAACGCTCACTTTATGCCTGTCAAATCGCTCTATTTTTGAGG
GAATAAATTCTGGAAAACTTCAACCCGGGGGGGGGGGGGGGGGGGGGGTT
TTTGGGGATACCCCCCCCCCGTGAAGGAAAACCCGGGGGGGGGGGGGGGG
GGTTGGAGGGGGGGCAAAATTTTTCAAAAAAAAAGGGGGGCAGAATCGNN
NNNNNNNNTTCGTTCGCTGCTTCTGCGTCTTTTTGTACTGTATGTGTGTG
TGGGGGAGTGGGTGTGCTGGAGGGGGCCGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGTTTAATTGGGAATACCCGTCCCGTTTGAAAGAACACCGTC
AGGCTGCTAGGGGTAATTGAAGACGGCGCAATATTTTTCACACAGAACGG
GCTCCATAAATGTAGAGCTCTAACTTCCGTGTATGTACGCATGCATGGGA
TGCACTGCTGTGTGCATATCATATGCATATAATTTACAGCCAGTATCTAT
ACATCATAGGCTGGCTCGGGAAAACTTAGTTTTGAGACTGACCCAAGTAT
TAGTATTAGTATTACAGTAGTATTATTAATAGTATTTTTCGACGAAACAG
CGAGTTCGATCACGTATGATCTGGTACAGCAGATCAAAGGGTCTCACTTA
GTGTTACAGTCGTGTCTTCCCTGTTTTGCTGCACTTGTGGTGGAGAACGT
CTGCCTTGGGGATTCCATATGACAGTACTTGTAGAGTAAATGTGCATGAT
AGACATATAGATGATATGCCCGGTTTTGTGATGCTTCCGTTCGTGTTTTG
GGAAGTATGGTGCATTTTTTGTGGCGAAATTTTCCGTTTCTCGAACAGGT
GAATAAACAGTTTGATACCTTGCTCCTACTCTATTTCCGTTGATTGCATT
CACCTCGTGACCGCTGTTGGGTTTATATCGCAGGCAGGTGTGTTGAAATG
TGGAGGCCAATGTGCGGCATCGTCATGAGTTATAGTATAATACAGTAGTT
GTAATAGTGATGATTCTTTTCATTTTCCGTTGAGGCACTGATCTCGTCAC
GACGGCTGGACGTTGACGTTGAGATCAATCTCAATGGCTTTATGTCAAAT
TAACACGAGCAACATCAAATTTTAGAGTAGGCTAGCTCTAACACTATTGC
TTACTGCCGACCTATTAATAGAATAGTTACATATGACAAGGTCAGTTTTG
GCGTGTGCCGTAGTCGAGTTGTGTTGGCGTGAGATGATCATCATCGAGAA
CCAACACCGCCAAACCACTCTGCCTGTGGGTACCGCAAGGTACATGATAC
TGTAATATTAATACTATATTACGCAAAATGGGATGGTTTGGCCCTTTTTG
GGAGAACAAGGCCGAGCTTTGCTACAAGTGCAAATGGTCGGAACACGCCC
GGAGCGGGGGGCGAGGCAGCAGTGGCGATATATGCAACCTCGCGAAGCGG
CTTTTTTCGCCTATGGCAGCTCTTTGGCAGCACAGCGAGGTGTACTATTG
TTCTAAAGTAGTGTATGCGTTTGTGTATATCGCTTTGCACGGTTTTTAAT
ACAACATGGAGATACTTGTATAGAGTAGGCTCTTGAAGCTTTTTTATAGG
ACTATTAATAATAGCGTTTGGAGATTTTGAAGATTTTTTTTTTCCCGTAC
TGTTTTTTCATTTGCCGTACGCACCACGTCCTACCAAGGCACACCTCACG
GGCGTGGTCGTGGCTACCTAGCAGTGTTGACGTTAAAACGCTTATCCCCC
GCTTAAGCAGTGTTACTCACTTGTACTCGTACAAGTACCAGTTGTACAGC
AGTATTGTAGCTCTGCTCTCCCGTATTTTTTTTTCATCATATCATTCGTA
CGATTTTACATATTTTGTCGATTTTTTTGTTTTATGAAACAACTGGAGAC
AGAGAGGTCTCGGCCGCGCCCGCTCGCGAAGAATTACCAGATTAATAGCG
CCCCGTTGCGGTTCAGCCCCCCCGCCCGAGACCTCTGTCGTCAGCGGCCA
TTGGGTTATGTTGTTCTGCCATCTTCATTGCCGCGCCCCGACTCGCGGTC
TTGACGCGATATTTTATATTATATTTCAAAATATTGTGCCAATAGTAACT
AGTGGGTTGCCACGGCTATGCCCGTGTGAGGTGTGCGTTGGCAGGACGAT
ATGCCGACGGAACGCGACACGGAGGCCGAACGCGGTCGATGTACTGTGCG
TGTCGCTGCTGTGTTTTCGCTTTTATGTAAAAAATATCGCTCAACACAAA
AATCAAGTTGTTTGGCATCAGACAGCAGCCTTGTCTAAAATCAATGTACT
CAACCGTCATTGTTGCATTAATTACTGTAATAAGATGACACCCCCATCAT
CATCATCATCATCATCATCGCCGGTCACGAAAGGGCACAATCGCAACACC
AACACCATCACCAACCCGTGCCTTTCAAAATCTGCGTACCGGCAGATAAA
TACTGTTACAGCAGTAACATCAAATGACTGCTTTAGCGTTCTTTACCGGA
ACACCAGACGTGCAAGTCAAGAGTGGCTTGTGTGCGCGCGACGAAGACAC
ACCGACACCTGCCCCCTCTCATCCCCTCTCACACATACGGGGAATCTGCA
TCCACACATCCACGGAGNNNNNNNNNNAATCTGTTTCGCGCATAAAACAA
AAAGACTTCTTTTCGCTCTCTTCACGAAACCCCCCCGCGGCACCTAAAAG
GGGGGCTTTGGCGCCCGCGCCCCCCCCCCCCCCCCCCGGTGTCTGCCCCA
TGTGCCCCAGTGACACTCCATCGTCCACTCCACCCCCCGGTACCTGCCCT
ATGCGTTCTATGTGCCCCATTCACCGCCCCACGGTCCACCCCACCCTTGC
AATGCGTTCGTGGTGTTGTACACTCTGTGGATGGCCTCATGGGTAAGATG
TGGTTCGTATTTGTAGGGGACCTGTTCGCGCGTGCATCCCACGGACATGG
CGTGGTTGTTTACCGCCCGATCTGGGCGTGAGGGGTGATAAGCTTGTTGC
GCGTCTTGCTGATGCTGGTGTGTGGTACTGTATTAATATGAATAGAAGGA
TTAACGGCGGGTCCAATGGTGACATGACGCTGTGTGATTCTTACTATTAA
TATTAATAAACACACAATCAAATCTGTCTGTAAGTGCTCATGCCTTATTA
CTTGTCTTTCCTTTTTCTGGTGATTACCTCATACGACTACCTACTCTTTG
TTGCCCGCCTGAAAAAATAAACGAACGGAAGATGTCGGCCAATCGGCTAA
CAAGCCCCGGTGATCAATTGGTCAATCAACAATCAGCTCCATCCACCCCA
CCGATCACCAACGAGCAATGCATCCAATCACCCAATTCAGCTCATCCAGC
TCGCCGCTCTCTCCGACTCCAGGCCGAAAGCGAAGAGAGATAAGCCCAGG
AGATCGAACAGCGCTAAGGAAGTGACCACCACCGCCAACGAAGAGAACGG
GGTGTTGGAGCTGGTAAGGTCGAAGTCGGTGGGCGCTAAGGACGCGAAGA
AGGACAGCAAGGGGGACCAGGTTAAGAAAAAGAAGGACAAAGAGAAGGCC
ATGTACGAGCACGTCGGCCGGATGAACGTGCGCCCGTTCCGCGATGACGT
GGCCGATGAAGAGGTTGAGGTGCGACTGGGTGCCGTGTGTGTGTGTGTGT
GCGTGTGCGTCTTTTGGTTGTTTTTGCCTGTCGAGGGGACGTGGCGAGCC
CTCGCGGAGGAGGGAATGGGGCGGCTTATCCATCACTATTATTGAACACA
CTACTAATACTATCACTATAATACTGTAGCGTGTAGGGCTAGGAGTAAGT
ACGGGCAGATTAGGTTCGAAAACAAACGGATGCGCAAATAAGGGTGGGTA
CTGTATTAACAGTACAAGCTCGAATACAAGTTGACAAAAATATCACAAGT
AAAAACAAGCCATTCCTATTAATAGAGTTACCTCTTGATTTTGATGTGAC
ACGATATGATAGCATCGTATATCGTATATCATGTAGGCTTGCACTGAGTT
AGATTGGGCAATATTTTTTCTCTACCAAAAAGCTAAAATATTGGTTAGAC
CCCAATGCTACAGTAGTTCTGTGTTCATAAATCTTAACTGTCTTCAGGGG
AAAGGGGGGAGCAGCGCTTTGTGTGCGCACAGCACTACTTTGTGCCTCTT
TTCATTTGTCGGCTTCGAAAAAACTCAGAGAGCTACAACAGCGCAGTAAA
TATCAAAGCGCATATAGTATATATACCGATTCAGCAGTGCCGAGCCCGTC
CATAGCAGGAAGCAGATTACACATTTTTTTACGAAGCCAATTTCAGAATG
CCCACTTGGATTTGAGGTATGATACCCACGTACTGGTATTGAGTAATTCC
CTACATCTAGTGGTACTCAAGTTTTGCCTGCCTTCGCTGTTAAGGCGAAC
GGAGTATTGCTGACACAGGATCGGGGGTGAGGTACCGAGAAGGGCGTGTC
AAAGGCAGAATATACAAGTGCTCCTGTTATATTTGGGTAGTTTTCAGCGG
GTACCGCGGACGGGGTCTGAGGTCCTGGCGCACAAACACCAATCGGAAAA
AGTCCCCGCATTGTGTGTAGTGTTTCATATCAATACGACAGCAGGCTTTT
TTTACCTGTGTTTTTGTGTTCTTTCTTTTTCCAACGACTGTTGCATCGTA
TAATATGGTATGAAACACTGCTCTTCTTTCCGAACGCCGACGTGCTATCA
GATCGCACTTGTTACTATGGGACACCTTGTCCAAGGACATGTCTGTGTGC
GTACGTGTGTGATGTTTGTATGCTAGGCATGCAAATATCGTAGCACTCCT
GGAATATTTGTATGTGCTGATTCGGCCACCACAACCGACACACCCAATTC
CTAACGTCTCTGCCTTGCATCGATGCACACCGTTTCCATCGTGGTGCAGC
ACATCGACGGCTTCCGAGTGGACACATTCGCACGCAACGAGGGGGAGTCC
GGGGGCAAGGCTCACTTCAAGTTCGTCTTCACGGTGGACAAGGGTGAGTT
GCCGCGCCTTCGTCGCCGTGCGGCGTAGCTACGTCACGCGTTTCTGCTCT
TGAACATGAGTTGCACAGTCGCGCGCAAGGGCTGCCCTTGTGCGCGGCGG
TGGGGTTGCGAAGGGAGGGAGGGGGGGGACCTTGCCCAAACAACAAGGAT
GGACCCCGCAGCCCGCAGCTCATTTTTTCGTTCTCGACAAAGTATTATTT
AGGGAGGTGGCCATCAACTGTTGATAGTCTATTATAATACTAAGTATTAG
TAGTAGGTAGCCACGGCTACGGCCGTGAGATGTGCGTTGGTAGGAACCGG
TGCCTGTGCGGCTCATGAAGCAACAGCAGGGGGGTGTTGAATGTTCCGAA
ATATTTTTTTTAATACAGTATCACACAAATACTGTCCATGCAAGAAGCCC
CAGGATGCTATTATACTCTCTCCTTCTATTTAAAAACTAGCGAAGAAGTA
TTAAATTCATCTTAAGACAATGGTCATGACACGTATCAGAGCTCGGCGTA
TCGTAGCTATCACCGTGGACTGCATGTAAGTACGCGCGGGGGTGGATCAC
GTCATATTACCAAAGGAGAGTTTGGAACACGAGTGTCTCGTCTCAACCCA
TTGAAGAAAATGTAAAAAAACATTAAGACGGGGACTTTTAATAGGATGGA
GCAGGCATTTTCCGCTGCGTGTCTCTTCGAACTCGTGCTTTTTTTGGTGG
AAAAGTGGTGCTGACTATTCGCGAAAGGTGGTGACTGCCGACCAACATTC
GGATGAGTCGGACTCGCCCGCCGCAAGGAAGAATTGGCGAGGGCACAGGC
TGTTCCGCTTTTGTTCTGCAACACAGGGTTCGTCTTTTGTGTTTGCCCAT
CTGTGGCCTCGCCCAATTCGGAGAACTTGTTGTCATCGCGCGGTCGGTCG
TCCTCATACAGCGGCGATTTTATCGGTTCTTCTTGGCACGATTTCGGTTA
CCCTGCCGTGCGGTCGGTTTTTCGTCGTTCCCGGCGTTTTTTCGCCCGAC
CAGCCCCTTTGTTATTACTAGTGTTGTTATTGTGACTGTTGTTATTAATA
GTTATTTGTCGCTCTTGGTTGTTACTGTGTGGCTACTGGTGCTGTGGTCG
TTGCTGTCGCTGCTGTGTTACTACTGGCATTCTGTTGTTGATAGCACTTG
AGAACACCGTCACGAGACAGCCCTATCTAGGTCGATCAACAACGTAACAC
TGCGGTCTCAAGAGGGCGCCAGAGAAACAAGCCTGACGATCGAATTGTGA
CGAGGTTGACGATATCGCAAGACGTGATACGCCCCGAAACCCACAGCCGC
CGTCACAACCTCGAGCGCACGTTAACCGGAGCACTCGTTTAAAATACGCA
TCAAACCAAACACACCCTTGAAATGGTAGGTTTAGGACGTAATATTTTCC
TAATACCCCAGTCCGCTATCACCTGTATGATGCGCGCGTGGCAGCTCCGT
CCTGCGTCGAGGTGGAGAAGAAATCGCGGCCGGTACTAGACGCCGTGCAC
GAGCGAGACACGGGCAACTTGCGGATTCGAGTCAACGACGGGCGAGAGAT
AGGGGCGAAAAATAGCGCAGCCGTCGAGATTGCCCTCGCGAATGTGGGGG
TGGTCCTGTTCAACCCCAGGACGATGGTGGGTGGC back to topCoding sequence (CDS) from alignment at S-dermatodea_contig1180:354..17138- >mRNA_S-dermatodea_contig1180.1141.1 ID=mRNA_S-dermatodea_contig1180.1141.1|Name=mRNA_S-dermatodea_contig1180.1141.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1386bp|location=Sequence derived from alignment at S-dermatodea_contig1180:354..17138- (Saccorhiza dermatodea SderLu1190fm monoicous) ATGTTCCATTCGGCCAACTCCAGTGTAGAGCGAGCCGTTGCGAGATGTTC CATTCGGCCAACTCCAGTGTAGAGCGAGCCGTTGCGAGCTTGTTTCCTGG GGACGATCAGGCTGTGCGAGCAGCGACGAACAAAAGCAATCCGATGTTCG ATAGGGCCGTGTCTGCTGAAGCTCCGCCACGTCCCAGCTTGTTTCCTGGG GACGATCAGGCTGTGCGAGCAGCGACGAACAAAAGCAATCCGATGTTCGA TAGGGCCGTGTCTGCTGAAGCTCCGCCACGTCCCAGGCCGAAAGCGAAGA GAGATAAGCCCAGGAGATCGAACAGCGCTAAGGAAGTGACCACCACCGCC AACGAAGAGAACGGGGTGTTGGAGCTGGTAAGGTCGAAGTCGGTGGGCGC TAAGGACGCGAAGAAGGACAGCAAGGGGGACCAGGTTAAGAAAAAGAAGG ACAAAGAGAAGGCCATGTACGAGCACGTCGGCCGGATGAACGTGCGCCCG TTCCGCGATGACGTGGCCGATGAAGAGGTTGAGGCCGAAAGCGAAGAGAG ATAAGCCCAGGAGATCGAACAGCGCTAAGGAAGTGACCACCACCGCCAAC GAAGAGAACGGGGTGTTGGAGCTGGTAAGGTCGAAGTCGGTGGGCGCTAA GGACGCGAAGAAGGACAGCAAGGGGGACCAGGTTAAGAAAAAGAAGGACA AAGAGAAGGCCATGTACGAGCACGTCGGCCGGATGAACGTGCGCCCGTTC CGCGATGACGTGGCCGATGAAGAGGTTGAGCACATCGACGGCTTCCGAGT GGACACATTCGCACGCAACGAGGGGGAGTCCGGGGGCAAGGCTCACTTCA AGTTCGTCTTCACGGTGGACAAGGGTGAGTTGCCGCGCCTTCCACATCGA CGGCTTCCGAGTGGACACATTCGCACGCAACGAGGGGGAGTCCGGGGGCA AGGCTCACTTCAAGTTCGTCTTCACGGTGGACAAGGGTGAGTTGCCGCGC CTTCCTCCGTCCTGCGTCGAGGTGGAGAAGAAATCGCGGCCGGTACTAGA CGCCGTGCACGAGCGAGACACGGGCAACTTGCGGATTCGAGTCAACGACG GGCGAGAGATAGGGGCGAAAAATAGCGCAGCCGTCGAGATTGCCCTCGCG AATGTGGGGGTGGTCCTGTTCAACCCCAGGACGATGGTGGGTGGCCTCCG TCCTGCGTCGAGGTGGAGAAGAAATCGCGGCCGGTACTAGACGCCGTGCA CGAGCGAGACACGGGCAACTTGCGGATTCGAGTCAACGACGGGCGAGAGA TAGGGGCGAAAAATAGCGCAGCCGTCGAGATTGCCCTCGCGAATGTGGGG GTGGTCCTGTTCAACCCCAGGACGATGGTGGGTGGC back to top
|