mRNA_S-dermatodea_contig11783.1129.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11783.1129.1 vs. uniprot
Match: A0A6H5L4K1_9PHAE (GH16 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4K1_9PHAE) HSP 1 Score: 418 bits (1075), Expect = 1.670e-138 Identity = 202/331 (61.03%), Postives = 245/331 (74.02%), Query Frame = 1
Query: 1 IFCLQVRTAGTFSFRHGRIEVKAKLPMGDWLWPAIWLLPENNAYGSWPASGEIDIMESRGNAPPYGDGIEGIGGVESSSSAMHWGPHYSMDSWDMSYGTLQLDS--GTFNDDFHTFGLYWDETQMYTYVDSDDKRLLTVDFDTGTGAEGMWEKGRFDERYPGMQNPWKGRGASAPYDQRFYVVMNVAVGGVNGFFPDGVGGKVWTNSDPDAAMKFHEATDEWFGTWDGTKAAMQVESVKVWQTEPDYFLDA-AAASGTLAPTYSDSYTSSSELGGVPEQ--GKEVAGAGTNEF----LVYLGCALIGATLGGFGVGAVLQRQNSHRWSKMH 966
+ +VRTAGTFSFR+GR+EVKAKLP GDWLWPAIWLLPE N YG WPASGEID+MESRGN+ Y G++G+GGV S+SSA HWGPHYSMDSWD +YG LD GTFNDDFHTFGLYWDE +MYTY+D D RLLTVDF + +G WEKG F+ER+PG++NPWKG APYDQ+FYVVMNVAVGGV+GFFPDGVGGK+W N D DAAMKFHEAT +W TWDG +A+Q+ES+KVWQT DYF+DA AAA P+ D + SS P G++ AG+ ++Y+GC+L+G LGG VG L ++S S+++
Sbjct: 146 VMSARVRTAGTFSFRYGRMEVKAKLPKGDWLWPAIWLLPEQNVYGQWPASGEIDVMESRGNSASYASGVDGVGGVNSASSAFHWGPHYSMDSWDETYGVYTLDEAEGTFNDDFHTFGLYWDENEMYTYIDDDSNRLLTVDFGAESEEDGFWEKGHFEERFPGVENPWKGAKPIAPYDQKFYVVMNVAVGGVSGFFPDGVGGKMWHNKDSDAAMKFHEATHDWHSTWDGKDSALQIESLKVWQTNADYFMDARAAARAGAIPSSGDKWESS------PPSFVGEDDAGSSXXXXXXXVMLYVGCSLLGGVLGGAAVGWWLGNRDSRNRSRVY 470
BLAST of mRNA_S-dermatodea_contig11783.1129.1 vs. uniprot
Match: D7FU26_ECTSI (Endo-1,3-beta-glucanase C-terminal, family GH16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU26_ECTSI) HSP 1 Score: 270 bits (690), Expect = 5.180e-84 Identity = 131/235 (55.74%), Postives = 161/235 (68.51%), Query Frame = 1
Query: 268 MDSWDMSYGTLQLDS--GTFNDDFHTFGLYWDETQMYTYVDSDDKRLLTVDFDTGTGAEGMWEKGRFDERYPGMQNPWKGRGASAPYDQRFYVVMNVAVGGVNGFFPDGVGGKVWTNSDPDAAMKFHEATDEWFGTWDGTKAAMQVESVKVWQTEPDYFLDAAAASGTLAPTYSDSYTSSSELGGVPEQGKEVAGAGTNEFLVYLGCALIGATLGGFGVGAVLQRQNSHRWSKMH 966
MD+WD +YG LD GTFNDDFHTFGLYWDE +MYTY+D D R+LTVDF G+G +G WEKG F+ER+PG++NPWKG APYDQ+FYVVMNVAVGGV+GFFPDGVGGK+W N D DAAMKFHEAT +W TWDG +A+Q+ESVKVWQT DYF+DA AA+G A S ++Y+GC+L+G LGG VG L ++S S+++
Sbjct: 1 MDAWDETYGVYTLDEAEGTFNDDFHTFGLYWDENEMYTYIDDDSNRVLTVDFGEGSGEDGFWEKGGFEERFPGVENPWKGAKPIAPYDQKFYVVMNVAVGGVSGFFPDGVGGKMWDNKDSDAAMKFHEATHDWHSTWDGKGSALQIESVKVWQTNADYFMDARAAAGAGAIASSXXXXXXXXXXXXXXXXXXXXXXXXXXAMLYVGCSLLGGVLGGVAVGWWLGNRDSRNRSRVY 235
BLAST of mRNA_S-dermatodea_contig11783.1129.1 vs. uniprot
Match: A0A835ZB27_9STRA (Glucan binding protein-2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB27_9STRA) HSP 1 Score: 267 bits (682), Expect = 4.210e-80 Identity = 149/315 (47.30%), Postives = 203/315 (64.44%), Query Frame = 1
Query: 16 VRTAGTFSFRHGRIEVKAKLPMGDWLWPAIWLLPENNAYGSWPASGEIDIMESRGNAPPYGD-GIEGIGGVESSSSAMHWGPHYSMDSWDMSYGTLQLDSG-TFNDDFHTFGLYWDETQMYTYVDSDDKRLLTVDFDTGTGAEGMWEKGRFDERYPGMQNPWKGRGASAPYDQRFYVVMNVAVGGVNGFFPDGVGGKVWTNSDPDAAMKFHEATDEWFGTWDGTKAAMQVESVKVWQTEPDYFLDAAAASGTLAPTYSDSYTSSSELGGVPEQGKEVAG-AGTNEFLVYLGCALIGATLGGFGVGAVLQRQNSHR 951
+RTA +FSFR+GR+EV AKLP GDW+ P+I LLP N YG+WP+SGEI IM+SRGNAP Y G + GG SS HWGPHYS + W ++ G++ +G TF DDFHT+GL+WD+ +YTYVD D R++++ F+ MWEKG F+ GM NPW+G A+AP+DQRFY+ M+V+VGGVNG+F DG+ GK WT+S+ AAM+F AT +W+ TW + +A+QVESVKVWQ + + AA+G Y + S LGG P + + AG ++ + + IG +G V L RQ + R
Sbjct: 143 LRTAESFSFRYGRVEVVAKLPRGDWIKPSISLLPARNVYGAWPSSGEITIMQSRGNAPGYAAAGDDAGGGCNVVSSLAHWGPHYSQNKWPLTIGSVAAPAGDTFADDFHTYGLFWDQDILYTYVDDDSNRVMSIAFNESAS---MWEKGGFEGS--GMANPWEGGSAAAPFDQRFYISMSVSVGGVNGYFIDGMEGKPWTDSNGQAAMEFWNATSDWWPTW--SDSALQVESVKVWQGDSGSNGGSYAAAGM----YYRAAEGVSALGGAPAPSRSSSTPAGPSQASIAMVAGAIGLCVG--IVATALARQANTR 444
BLAST of mRNA_S-dermatodea_contig11783.1129.1 vs. uniprot
Match: A0A0H5QSM4_9EUKA (GH16 domain-containing protein n=2 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QSM4_9EUKA) HSP 1 Score: 260 bits (665), Expect = 1.550e-78 Identity = 119/240 (49.58%), Postives = 172/240 (71.67%), Query Frame = 1
Query: 1 IFCLQVRTAGTFSFRHGRIEVKAKLPMGDWLWPAIWLLPENNAYGSWPASGEIDIMESRGNAPPYGDGIEGIGGVESSSSAMHWGPHYSMDSWDMSYGTLQLDSGTFNDDFHTFGLYWDETQMYTYVDSDDKRLLTVDFDTGTGAEGMWEKGRFDERYPGMQNPWKGRGASAPYDQRFYVVMNVAVGGVNGFFPDGVGGKVWTNSDPDAAMKFHEATDEWFGTWDGTKAAMQVESVKVWQ 720
I ++R++ +FSF++GR+EV+AK+P GDW+WPAIW LP+ +AYG WPASGEID++ESRGN PY GGV++++S +HWGP + D W ++G+ L G F DDFHTF + W + ++ TYVD + +L V ++ GTG WE G +D P M+NPW+GRG++AP+DQ+F+++MNVAVGG N +FPDG GGK WTN++ A F +A D+WF TW G AAM+++ V+++Q
Sbjct: 133 IMSARLRSSRSFSFKYGRVEVRAKMPRGDWIWPAIWFLPQWSAYGQWPASGEIDMVESRGNKKPY------EGGVDTAASTLHWGPWAAEDQWPKTHGSYSLPDGDFGDDFHTFVMEWSKDELITYVDKPENVMLNVKWN-GTGH---WENGGWDNN-PRMKNPWEGRGSNAPFDQKFFMIMNVAVGGTNTYFPDGKGGKPWTNANQHAINAFWQAKDQWFPTWKGEDAAMKIDYVRIYQ 361
BLAST of mRNA_S-dermatodea_contig11783.1129.1 vs. uniprot
Match: A0A4D9CN72_9STRA (GH16 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CN72_9STRA) HSP 1 Score: 267 bits (682), Expect = 1.660e-78 Identity = 129/238 (54.20%), Postives = 169/238 (71.01%), Query Frame = 1
Query: 13 QVRTAGTFSFRHGRIEVKAKLPMGDWLWPAIWLLPENNAYGSWPASGEIDIMESRGNAPPYGDGIEGIGGVESSSSAMHWGPHYSMDSWDMSYG--TLQLDSGTFNDDFHTFGLYWDETQMYTYVDSDDKRLLTVDFDTGTGAEGMWEKGRFDERYPGMQNPWKGRGASAPYDQRFYVVMNVAVGGVNGFFPDGVGGKVWTNSDPDAAMKFHEATDEWFGTWDGTKAAMQVESVKVWQ 720
++RT GTF+F++GR+EV+AKLP GDWLWPAIWLLPE N YG WPASGEID+MESRGN P Y G G +S S MHWGP++++D +DM+ TL GTFNDDFH FG+ W+E +YTY+D +D+++L V FD +E+G F + PG NPW GR +AP+DQ FY+V+NVAVGG++ FF DG GK WTN+ A F +A DEW+ +W G +A+QV+SV+VWQ
Sbjct: 231 RLRTTGTFTFQYGRLEVEAKLPRGDWLWPAIWLLPEKNVYGQWPASGEIDVMESRGNKPGYVKG-----GYDSFGSCMHWGPYFALDKYDMTCESFTLPEGKGTFNDDFHVFGMVWNEQGLYTYLDREDQKVLEVKFDRP-----FFERGDFSD-VPGTGNPWIGRPNAAPFDQPFYLVLNVAVGGLSNFFEDGEDGKPWTNTGKGAPYLFAKAKDEWYPSWAGRDSALQVKSVRVWQ 457
BLAST of mRNA_S-dermatodea_contig11783.1129.1 vs. uniprot
Match: A0A3P3Y679_PLABS (GH16 domain-containing protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y679_PLABS) HSP 1 Score: 255 bits (651), Expect = 7.200e-76 Identity = 119/242 (49.17%), Postives = 173/242 (71.49%), Query Frame = 1
Query: 1 IFCLQVRTAGTFSFRHGRIEVKAKLPMGDWLWPAIWLLPENNAYGSWPASGEIDIMESRGNAPPYGDGIEGIGGVESSSSAMHWGPHYSMDSWDMSYGTLQLDSGTFNDDFHTFGLYWDETQMYTYVDSDDKRLLTVDFDTGTGAEGMWEKGRFDERYPGMQNPWKGRGASAPYDQRFYVVMNVAVGGVNGFFPDGVGGKVWTNSDPDAAMKFHEATDEWFGTWDGTKAAMQVESVKVWQTE 726
I ++R++ +F F++GR+EV+AKLP GDW+WPAIW LP+ +AYG WPASGEID++ESRGNA Y G+ GV+++++ +HWGP + D W ++G+ L GT+ DDFH F + W E+++ TYVD+ D +L V ++ G WE G +D+ P M+NPW+GRG++AP+DQ F+++MNVAVGG N +F DGVGGK W NSD + KF +A D+W TWDG AAM+V+ V+++Q +
Sbjct: 176 IMSARLRSSRSFHFKYGRVEVRAKLPRGDWIWPAIWFLPQWSAYGQWPASGEIDMIESRGNAD-YPPGL----GVDTAATTLHWGPWAAEDQWPKTHGSYTLPKGTYADDFHLFVMEWSESRLTTYVDTPDNIMLDVHWN----KTGHWEFGGWDDD-PRMKNPWEGRGSNAPFDQEFFMIMNVAVGGTNTYFEDGVGGKPWVNSDQHSVNKFWDAKDQWLPTWDGEDAAMKVDYVRIYQAK 407
BLAST of mRNA_S-dermatodea_contig11783.1129.1 vs. uniprot
Match: A0A7S3GC02_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GC02_9EUKA) HSP 1 Score: 252 bits (644), Expect = 6.050e-75 Identity = 117/238 (49.16%), Postives = 160/238 (67.23%), Query Frame = 1
Query: 13 QVRTAGTFSFRHGRIEVKAKLPMGDWLWPAIWLLPENNAYGSWPASGEIDIMESRGNAPPYGDGIEGIGGVESSSSAMHWGPHYSMDSWDMSYGTLQLDSGT--FNDDFHTFGLYWDETQMYTYVDSDDKRLLTVDFDTGTGAEGMWEKGRFDERYPGMQNPWKGRGASAPYDQRFYVVMNVAVGGVNGFFPDGVGGKVWTNSDPDAAMKFHEATDEWFGTWDGTKAAMQVESVKVWQ 720
++RT +FSF++GR+EV+AKLP GDWLWPAIWL+PE+N YG WPASGEIDIMESRGNA YG + S S +HWGP++ D + +++ + SG+ DDFH +GLYWDE +MYTY+D D +R+L + D E W +G FD NPW+G G +AP+D+ F+ V+NVA GG G+FPDGV GK W++SDP A F +A + W+ TW T ++ ++ V+VWQ
Sbjct: 193 RLRTVNSFSFKYGRVEVRAKLPKGDWLWPAIWLIPEHNEYGQWPASGEIDIMESRGNAGEYG--------INSFGSTLHWGPYFGQDPYSLTHEQYTVGSGSPSLADDFHVYGLYWDENEMYTYIDDDSQRVLNLKMD-----ESFWARGGFDSL--NADNPWQGGGVNAPFDKNFFFVLNVACGGTAGYFPDGVAGKPWSDSDPHAVNAFIQAQNSWYPTW--TSPSLAIDYVRVWQ 413
BLAST of mRNA_S-dermatodea_contig11783.1129.1 vs. uniprot
Match: A0A8J8NPG5_HALGN (GH16 domain-containing protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NPG5_HALGN) HSP 1 Score: 249 bits (636), Expect = 2.300e-74 Identity = 116/236 (49.15%), Postives = 157/236 (66.53%), Query Frame = 1
Query: 13 QVRTAGTFSFRHGRIEVKAKLPMGDWLWPAIWLLPENNAYGSWPASGEIDIMESRGNAPPYGDGIEGIGGVESSSSAMHWGPHYSMDSWDMSYGT-LQLDSGTFNDDFHTFGLYWDETQMYTYVDSDDKRLLTVDFDTGTGAEGMWEKGRFDERYPGMQNPWKGRGASAPYDQRFYVVMNVAVGGVNGFFPDGVGGKVWTNSDPDAAMKFHEATDEWFGTWDGTKAAMQVESVKVW 717
++RTA +FSF++GR+EV AKLP GDWLWPAIW+LP+ N YG+WPASGEIDIMESRGN P Y GG + S +HWGP + + + +++ D + D FHT+GLYWD+ +YTY+D + K++L VDF +G WEKG F NPW G +AP+++ FY+VMN+AVGG +FPDG GGK W N DP A F+ A +W+ TW G AA++++SV+VW
Sbjct: 127 RLRTAKSFSFQYGRVEVVAKLPKGDWLWPAIWMLPKYNEYGNWPASGEIDIMESRGNGPSY----PAEGGHNAFGSTLHWGPAWDQNRFPLTHKVWFTPDGSSLGDAFHTYGLYWDQNGLYTYIDDESKKVLQVDFK----EKGFWEKGGFPST---DDNPWVGENNAAPFNREFYIVMNLAVGGTGNYFPDGQGGKPWANGDPHAPNAFYNAKGQWYPTWKGEDAALKIDSVRVW 351
BLAST of mRNA_S-dermatodea_contig11783.1129.1 vs. uniprot
Match: A0A7S3H4A6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4A6_9STRA) HSP 1 Score: 247 bits (630), Expect = 1.320e-73 Identity = 117/238 (49.16%), Postives = 165/238 (69.33%), Query Frame = 1
Query: 13 QVRTAGTFSFRHGRIEVKAKLPMGDWLWPAIWLLPENNAYGSWPASGEIDIMESRGNAPPYGDGIEGIGGVESSSSAMHWGPHYSMDSWDMSYGTLQLDSGTFNDDFHTFGLYWDETQMYTYVDSDDKRLLTVDFDTGTGAEGMWEKGRFDERYPGMQNPWKGRGASAPYDQRFYVVMNVAVGGVNGFFPDGVGGKVWTNSDPDAAMKFHEATDEWFGTWD--GTKAAMQVESVKVWQ 720
++RT +FSF++GR+E++AKLP GDWLWPA+WLLPE+ AYG WPASGEID++ESRGN Y GG S +H+GP + D + +++G LD+GT NDDFHTFGLYW E +YTY+D+DD R+L + + + W++G +D+ P + NPW G+ AP+DQ+FY++ N+AVGGVNG+FPDG GGK W+++ A F+ A D TWD G +A+Q+ SVK++Q
Sbjct: 129 RLRTVNSFSFKYGRLEIEAKLPRGDWLWPAMWLLPEDQAYGVWPASGEIDLVESRGNDKSYP-----AGGNNCFGSTLHFGPFWPEDPYTLAHGEKCLDAGTLNDDFHTFGLYWSEDHIYTYLDNDDNRVLDLPVN-----QSFWQRGGWDKN-PTLNNPWTGQPDVAPFDQKFYLIFNLAVGGVNGYFPDGQGGKPWSDATSTAMADFNNALDSVVKTWDMVGDDSALQIRSVKLYQ 355
BLAST of mRNA_S-dermatodea_contig11783.1129.1 vs. uniprot
Match: J9J251_9SPIT ((1,3)-beta-d-glucan binding protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9J251_9SPIT) HSP 1 Score: 246 bits (627), Expect = 4.150e-73 Identity = 111/239 (46.44%), Postives = 161/239 (67.36%), Query Frame = 1
Query: 13 QVRTAGTFSFRHGRIEVKAKLPMGDWLWPAIWLLPENNAYGSWPASGEIDIMESRGNAPPYGDGIEGIGGVESSSSAMHWGPHYSMDSWDMSYGTLQLDSGTFNDDFHTFGLYWDETQMYTYVDSDDKRLLTVDFDTGTGAEGMWEKGRFDERYPGMQNPWKGRGASAPYDQRFYVVMNVAVGGVNGFFPDGVGGKVWTNSDPDAAMKFHEATDEWFGTWDGTKAAMQVESVKVWQTEP 729
++R+ +FS ++GR+EVKAKLP GDWLWPAIW+LP N YG+WPASGEIDIMESRGN P Y IGG +S S +HWGP++ + + +++ + + + NDDFH +GLYWDE+ +YTY D + ++L VDF + W++G+F + NPW G +AP+++ FY++MN+AVGG +FPDG+GGK W+N+ P + +F A W TW G +A+Q++SV+VW P
Sbjct: 126 RIRSVNSFSTKYGRVEVKAKLPRGDWLWPAIWMLPTYNEYGTWPASGEIDIMESRGNDPSYP-----IGGHDSFGSTLHWGPNWDQNKFSLTHKDFKH-TASLNDDFHVYGLYWDESGLYTYFDKPENKVLEVDFT----KQSFWDRGQFPNTF---DNPWVGENNAAPFNREFYLIMNLAVGGTANYFPDGMGGKPWSNTSPHSVNEFWNARGAWQQTWKGEASALQIDSVQVWSVTP 351 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11783.1129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11783.1129.1 >prot_S-dermatodea_contig11783.1129.1 ID=prot_S-dermatodea_contig11783.1129.1|Name=mRNA_S-dermatodea_contig11783.1129.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=315bp MGDWLWPAIWLLPENNAYGSWPASGEIDIMESRGNAPPYGDGIEGIGGVEback to top mRNA from alignment at S-dermatodea_contig11783:91..7277- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11783.1129.1 ID=mRNA_S-dermatodea_contig11783.1129.1|Name=mRNA_S-dermatodea_contig11783.1129.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7187bp|location=Sequence derived from alignment at S-dermatodea_contig11783:91..7277- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11783:91..7277- >mRNA_S-dermatodea_contig11783.1129.1 ID=mRNA_S-dermatodea_contig11783.1129.1|Name=mRNA_S-dermatodea_contig11783.1129.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1890bp|location=Sequence derived from alignment at S-dermatodea_contig11783:91..7277- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |