mRNA_S-dermatodea_contig11760.1113.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11760.1113.1
Unique NamemRNA_S-dermatodea_contig11760.1113.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig11760.1113.1 vs. uniprot
Match: A0A3M6VRF7_9STRA (HSF_DOMAIN domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRF7_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.020e-20
Identity = 49/113 (43.36%), Postives = 73/113 (64.60%), Query Frame = 1 
Query:  154 APFVSKTYGIVNGESEDIVSWWTSVGEDTFVIKRVDVFQEQVLPRFFSHKNYSSFVRQLNNHGFSRVRSPSSAVGNAGDGRGKRPDHEAQWWEFKHPKFRRGRKGLLSEIKRR 492
            A F+ KTY +++    ++ SW T+   D+FV+K+   F E+V+P +F H+N+SSFVRQLN +GF +VRS S  + +  +  G        WWEF+H +F RGR+ LL EI+RR
Sbjct:   59 ALFLEKTYELLSRCPPELASWTTN--GDSFVVKQPVAFAERVIPTYFKHRNFSSFVRQLNLYGFRKVRSASPVLESGAEPEGMEDSSPRGWWEFRHERFVRGRRDLLGEIRRR 169
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BLAST of mRNA_S-dermatodea_contig11760.1113.1 vs. uniprot
Match: K3XA08_GLOUD (HSF_DOMAIN domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XA08_GLOUD)

HSP 1 Score: 96.7 bits (239), Expect = 4.150e-20
Identity = 50/111 (45.05%), Postives = 69/111 (62.16%), Query Frame = 1 
Query:  160 FVSKTYGIVNGESEDIVSWWTSVGEDTFVIKRVDVFQEQVLPRFFSHKNYSSFVRQLNNHGFSRVRSPSSAVGNAGDGRGKRPDHEAQWWEFKHPKFRRGRKGLLSEIKRR 492
            F+ KTY ++   S ++ +W T +G D+F++K+   F E V+P +F HKN+SSFVRQLN +GF +VR  +    N             +WWEF+H KF RGRK LL EIKRR
Sbjct:  142 FLEKTYEMLEKCSPEVAAWSTPLG-DSFIVKKPIAFAEHVIPVYFKHKNFSSFVRQLNFYGFRKVRVDAETAANV---------DPKEWWEFRHDKFVRGRKDLLREIKRR 242
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BLAST of mRNA_S-dermatodea_contig11760.1113.1 vs. uniprot
Match: A0A6H5L567_9PHAE (HSF_DOMAIN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L567_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 2.750e-19
Identity = 51/110 (46.36%), Postives = 69/110 (62.73%), Query Frame = 1 
Query:  160 FVSKTYGIVNGESEDIVSWWTSVGEDTFVIKRVDVFQEQVLPRFFSHKNYSSFVRQLNNHGFSRVRSPSSAVGNAGDGRGKRPDHEAQWWEFKHPKFRRGRKGLLSEIKR 489
            F+ KTY ++N   ED+ + WT+ G DTFVIK  D F  +V+PRFF H  +SSFVRQLN +GF +V+S  +  G            +++WWEFKH  F R +  LLSEI+R
Sbjct:   25 FLRKTYEMIN-TCEDVHAAWTAAG-DTFVIKDPDTFANEVIPRFFKHNKFSSFVRQLNFYGFRKVKSNITVDG-----------QDSKWWEFKHDLFLRDKPNLLSEIRR 121
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BLAST of mRNA_S-dermatodea_contig11760.1113.1 vs. uniprot
Match: D7G9I4_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I4_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 9.460e-19
Identity = 54/135 (40.00%), Postives = 82/135 (60.74%), Query Frame = 1 
Query:  109 SPGRSASDATQLSPIAPFVSKTYGIVNGESEDIVSWWTSVGEDTFVIKRVDVFQEQVLPRFFSHKNYSSFVRQLNNHGFSRVR-----SPSSAVGNAGDGRGKRPDHEAQWWEFKHPKFRRGRKGLLSEIKRRKE 498
            SP ++A++    + I  F+ +T+  +   S DIV W + VG D+F++K+V  F E +LP +++HK + SFVRQLN +GF +VR     S +S+            +  A W EFKHP+FRRGR+ LL  IKR+K+
Sbjct:    5 SPRKAANEPYNSNHIPVFLDRTFSFIEDTSPDIVCW-SEVG-DSFIVKKVLAF-EGLLPSYYNHKKFLSFVRQLNFYGFKKVRGRGASSRASSXXXXXXXXAAEAEESASWEEFKHPQFRRGRRDLLVGIKRQKD 136
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BLAST of mRNA_S-dermatodea_contig11760.1113.1 vs. uniprot
Match: A0A7S2UPP7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPP7_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.750e-18
Identity = 52/126 (41.27%), Postives = 77/126 (61.11%), Query Frame = 1 
Query:  115 GRSASDATQLSPIAP-FVSKTYGIVNGESEDIVSWWTSVGEDTFVIKRVDVFQEQVLPRFFSHKNYSSFVRQLNNHGFSRVRSPSSAVGNAGDGRGKRPDHEAQWWEFKHPKFRRGRKGLLSEIKR 489
            G   SDA + SP AP F+ KTY +++   +  V+ W   G +TFV+K  ++F  +++P+FF H N+SSFVRQLN +GF +++S    +    D      + EA +W F+H KF RGR  LL EIK+
Sbjct:   38 GSKGSDAKKESPEAPIFLRKTYHMID-TCDPKVAGWAEDG-NTFVVKDPEIFASEIIPQFFKHNNFSSFVRQLNFYGFRKIKSDPIKLNTVTD------EVEASYWRFRHDKFLRGRPDLLGEIKK 155
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BLAST of mRNA_S-dermatodea_contig11760.1113.1 vs. uniprot
Match: A0A8K1CMF4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMF4_PYTOL)

HSP 1 Score: 91.3 bits (225), Expect = 3.100e-18
Identity = 55/126 (43.65%), Postives = 75/126 (59.52%), Query Frame = 1 
Query:  118 RSASDATQLSPIAP-FVSKTYGIVNGESEDIVSWWTSVGEDTFVIKRVDVFQEQVLPRFFSHKNYSSFVRQLNNHGFSRVRSPSSAVGNAGDGRGKRPDHEAQWWEFKHPKFRRGRKGLLSEIKRR 492
            R  SDA      +P F+ KTY +++ +    ++ W+S G D+F++K    F E V+P +F HKN+SSFVRQLN +GF +VR     V    D +         WWEF+H KF+RGRK LL EIKRR
Sbjct:  139 RVESDAAHPHATSPLFLEKTYEMLD-KCATHIACWSSAG-DSFIVKNPIEFAENVIPSYFKHKNFSSFVRQLNFYGFRKVRVVDPEVTGGVDPK--------DWWEFRHEKFQRGRKELLKEIKRR 254
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BLAST of mRNA_S-dermatodea_contig11760.1113.1 vs. uniprot
Match: A0A484EF72_BRELC (HSF_DOMAIN domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EF72_BRELC)

HSP 1 Score: 90.9 bits (224), Expect = 3.920e-18
Identity = 50/113 (44.25%), Postives = 72/113 (63.72%), Query Frame = 1 
Query:  154 APFVSKTYGIVNGESEDIVSWWTSVGEDTFVIKRVDVFQEQVLPRFFSHKNYSSFVRQLNNHGFSRVRSPSSAVGNAGDGRGKRPDHEAQWWEFKHPKFRRGRKGLLSEIKRR 492
            A F+ KTY ++     ++ SW T  G D+FV+K+   F E+V+P +F H+ +SSFVRQLN +GF +VR+ +S V    DG+         WWEF+H +F RGR+ LL EI+RR
Sbjct:   54 ALFLEKTYELLERCPPEVASW-TDKG-DSFVVKQPTPFAERVIPTYFKHRKFSSFVRQLNLYGFRKVRA-TSVVTTVDDGKTGEDASPKDWWEFRHERFVRGRRDLLCEIRRR 163
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BLAST of mRNA_S-dermatodea_contig11760.1113.1 vs. uniprot
Match: A0A0N7L766_PLAHL (Hsf-type dna n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L766_PLAHL)

HSP 1 Score: 89.7 bits (221), Expect = 1.000e-17
Identity = 49/114 (42.98%), Postives = 72/114 (63.16%), Query Frame = 1 
Query:  154 APFVSKTYGIVNGESEDIVSWWTSVGEDTFVIKRVDVFQEQVLPRFFSHKNYSSFVRQLNNHGFSRVRSPSSAVGNAGDGRGKRPDHEAQ-WWEFKHPKFRRGRKGLLSEIKRR 492
            A F+ KTY ++     D+ SW  ++  D+FV+K+  VF E V+P +F H+ +SSFVRQLN +GF +VR+ S++        G   D   + WWEF+H +F RGR+ LL EI+RR
Sbjct:   52 ALFLEKTYELLERCPSDVASW--TIKGDSFVVKQPAVFAEHVIPTYFKHRKFSSFVRQLNLYGFRKVRATSASALIDDIETGVEEDASPKDWWEFRHERFVRGRRDLLCEIRRR 163
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BLAST of mRNA_S-dermatodea_contig11760.1113.1 vs. uniprot
Match: A0A6A2ZLP9_HIBSY (F-box protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2ZLP9_HIBSY)

HSP 1 Score: 86.3 bits (212), Expect = 2.280e-17
Identity = 52/121 (42.98%), Postives = 70/121 (57.85%), Query Frame = 1 
Query:  136 TQLSPIAPFVSKTYGIVNGESED-IVSWWTSVGEDTFVIKRVDVFQEQVLPRFFSHKNYSSFVRQLNNHGFSRVRSPSSAVGNAGDGRGKRPDHEAQWWEFKHPKFRRGRKGLLSEIKRRK 495
            TQ +  APF++KTY +V+    D IVSW  +  E TFV++R+  F + +LP++F H N+SSFVRQLN +GF +V                     A  WEF +  FR+G K LLSEI RRK
Sbjct:   13 TQNTVPAPFLTKTYQLVDDHRTDHIVSWGEN--ETTFVVRRIPEFAKNLLPKYFKHNNFSSFVRQLNTYGFKKV--------------------VADRWEFANENFRKGAKHLLSEIHRRK 111
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BLAST of mRNA_S-dermatodea_contig11760.1113.1 vs. uniprot
Match: A0A087HGG4_ARAAL (HSF_DOMAIN domain-containing protein n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087HGG4_ARAAL)

HSP 1 Score: 87.8 bits (216), Expect = 2.620e-17
Identity = 49/124 (39.52%), Postives = 69/124 (55.65%), Query Frame = 1 
Query:  124 ASDATQLSPIAPFVSKTYGIVNGESEDIVSWWTSVGEDTFVIKRVDVFQEQVLPRFFSHKNYSSFVRQLNNHGFSRVRSPSSAVGNAGDGRGKRPDHEAQWWEFKHPKFRRGRKGLLSEIKRRK 495
            ++D    S IAPF+ K Y +V+  S D +  W+  G+++FVI    +F  Q+LP++F H N+SSFVRQLN +GF +V                    +A  WEF +  F RGRK LL  +KRRK
Sbjct:    4 SADGGGSSSIAPFLKKCYEMVDDSSSDSIISWSQNGDNSFVISDSTIFSVQLLPKYFKHSNFSSFVRQLNIYGFRKV--------------------DADRWEFANDGFVRGRKDLLKNVKRRK 107
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11760.1113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3M6VRF7_9STRA2.020e-2043.36HSF_DOMAIN domain-containing protein n=2 Tax=Peron... [more]
K3XA08_GLOUD4.150e-2045.05HSF_DOMAIN domain-containing protein n=1 Tax=Globi... [more]
A0A6H5L567_9PHAE2.750e-1946.36HSF_DOMAIN domain-containing protein n=2 Tax=Ectoc... [more]
D7G9I4_ECTSI9.460e-1940.00N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A7S2UPP7_9STRA1.750e-1841.27Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A8K1CMF4_PYTOL3.100e-1843.65Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A484EF72_BRELC3.920e-1844.25HSF_DOMAIN domain-containing protein n=1 Tax=Bremi... [more]
A0A0N7L766_PLAHL1.000e-1742.98Hsf-type dna n=1 Tax=Plasmopara halstedii TaxID=47... [more]
A0A6A2ZLP9_HIBSY2.280e-1742.98F-box protein n=1 Tax=Hibiscus syriacus TaxID=1063... [more]
A0A087HGG4_ARAAL2.620e-1739.52HSF_DOMAIN domain-containing protein n=1 Tax=Arabi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11760contigS-dermatodea_contig11760:5748..7309 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score98.2
Seed ortholog evalue4e-18
Seed eggNOG ortholog65071.PYU1_T014057
Preferred nameHSF4
KEGG koko:K09414,ko:K09415,ko:K09416,ko:K09417,ko:K09419
KEGG Pathwayko04212,ko05134,map04212,map05134
GOsGO:0000003,GO:0000122,GO:0000165,GO:0000228,GO:0000280,GO:0000302,GO:0000775,GO:0000776,GO:0000785,GO:0000790,GO:0000791,GO:0000792,GO:0000922,GO:0000976,GO:0000977,GO:0000978,GO:0000981,GO:0000982,GO:0000987,GO:0001012,GO:0001046,GO:0001047,GO:0001067,GO:0001078,GO:0001101,GO:0001161,GO:0001162,GO:0001227,GO:0001228,GO:0001654,GO:0001701,GO:0001817,GO:0001818,GO:0001890,GO:0001892,GO:0001932,GO:0001934,GO:0002119,GO:0002164,GO:0002237,GO:0002376,GO:0002673,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003697,GO:0003700,GO:0003712,GO:0003713,GO:0003714,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005700,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0006139,GO:0006282,GO:0006325,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006464,GO:0006468,GO:0006482,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0006955,GO:0006979,GO:0006986,GO:0006996,GO:0007049,GO:0007143,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007283,GO:0007292,GO:0007346,GO:0007423,GO:0007565,GO:0007568,GO:0007600,GO:0007601,GO:0008150,GO:0008152,GO:0008214,GO:0008284,GO:0008285,GO:0008340,GO:0009058,GO:0009059,GO:0009266,GO:0009299,GO:0009314,GO:0009408,GO:0009416,GO:0009605,GO:0009607,GO:0009617,GO:0009620,GO:0009628,GO:0009635,GO:0009636,GO:0009719,GO:0009725,GO:0009790,GO:0009791,GO:0009792,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010212,GO:0010243,GO:0010259,GO:0010332,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010656,GO:0010660,GO:0010662,GO:0010664,GO:0010665,GO:0010667,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0014070,GO:0015630,GO:0016043,GO:0016070,GO:0016071,GO:0016310,GO:0016569,GO:0016570,GO:0016577,GO:0016604,GO:0016605,GO:0016607,GO:0017085,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0019902,GO:0019903,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0030154,GO:0030162,GO:0031072,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031331,GO:0031347,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031440,GO:0031442,GO:0031490,GO:0031620,GO:0031647,GO:0031650,GO:0031974,GO:0031981,GO:0032092,GO:0032101,GO:0032268,GO:0032269,GO:0032270,GO:0032355,GO:0032496,GO:0032501,GO:0032502,GO:0032504,GO:0032680,GO:0032720,GO:0032774,GO:0032870,GO:0032991,GO:0033169,GO:0033554,GO:0033574,GO:0033993,GO:0034599,GO:0034605,GO:0034614,GO:0034620,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0035556,GO:0035690,GO:0035770,GO:0035966,GO:0035967,GO:0036003,GO:0036211,GO:0040008,GO:0040014,GO:0040018,GO:0040024,GO:0042127,GO:0042221,GO:0042325,GO:0042327,GO:0042493,GO:0042509,GO:0042531,GO:0042542,GO:0042742,GO:0042802,GO:0042803,GO:0042981,GO:0043009,GO:0043010,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043170,GO:0043200,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043280,GO:0043281,GO:0043388,GO:0043393,GO:0043412,GO:0043434,GO:0043497,GO:0043565,GO:0043618,GO:0043620,GO:0043621,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044212,GO:0044213,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0044706,GO:0045087,GO:0045120,GO:0045595,GO:0045597,GO:0045738,GO:0045787,GO:0045862,GO:0045892,GO:0045893,GO:0045927,GO:0045931,GO:0045934,GO:0045935,GO:0045937,GO:0045944,GO:0046425,GO:0046427,GO:0046483,GO:0046677,GO:0046685,GO:0046686,GO:0046688,GO:0046982,GO:0046983,GO:0048232,GO:0048285,GO:0048468,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048568,GO:0048583,GO:0048584,GO:0048585,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048731,GO:0048856,GO:0048869,GO:0050684,GO:0050685,GO:0050727,GO:0050730,GO:0050731,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050821,GO:0050829,GO:0050832,GO:0050877,GO:0050896,GO:0050953,GO:0051052,GO:0051053,GO:0051054,GO:0051094,GO:0051098,GO:0051099,GO:0051101,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051259,GO:0051260,GO:0051276,GO:0051321,GO:0051336,GO:0051345,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0051879,GO:0052547,GO:0052548,GO:0060136,GO:0060255,GO:0060548,GO:0061408,GO:0061458,GO:0061770,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070076,GO:0070206,GO:0070207,GO:0070301,GO:0070887,GO:0070988,GO:0071214,GO:0071229,GO:0071230,GO:0071236,GO:0071241,GO:0071243,GO:0071248,GO:0071276,GO:0071280,GO:0071310,GO:0071375,GO:0071392,GO:0071396,GO:0071407,GO:0071417,GO:0071478,GO:0071479,GO:0071480,GO:0071495,GO:0071704,GO:0071840,GO:0072686,GO:0072737,GO:0072738,GO:0080090,GO:0080134,GO:0080135,GO:0090068,GO:0090083,GO:0090084,GO:0090261,GO:0090304,GO:0097159,GO:0097165,GO:0097237,GO:0097327,GO:0097431,GO:0097659,GO:0097677,GO:0098542,GO:0098687,GO:0098847,GO:0104004,GO:0140013,GO:0140110,GO:1900034,GO:1900117,GO:1900119,GO:1900363,GO:1900365,GO:1901214,GO:1901215,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901652,GO:1901653,GO:1901654,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901987,GO:1901989,GO:1902074,GO:1902075,GO:1902510,GO:1902512,GO:1902531,GO:1902533,GO:1902679,GO:1902680,GO:1902749,GO:1902751,GO:1902806,GO:1902808,GO:1903046,GO:1903311,GO:1903313,GO:1903320,GO:1903321,GO:1903506,GO:1903507,GO:1903508,GO:1903555,GO:1903556,GO:1903624,GO:1903626,GO:1903935,GO:1903936,GO:1904385,GO:1904526,GO:1904528,GO:1904892,GO:1904894,GO:1990776,GO:1990837,GO:1990841,GO:1990904,GO:2000112,GO:2000113,GO:2000116,GO:2000779,GO:2000780,GO:2001020,GO:2001021,GO:2001032,GO:2001033,GO:2001056,GO:2001141
EggNOG free text desc.heat shock factor
EggNOG OGs1MIYX@121069,COG5169@1,KOG0627@2759
COG Functional cat.K
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03000
Hectar predicted targeting categoryother localisation
Exons2
Model size520
Cds size519
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924216.4194705-CDS-S-dermatodea_contig11760:5747..60871622924216.4194705-CDS-S-dermatodea_contig11760:5747..6087Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11760 5748..6087 +
1694079099.6063442-CDS-S-dermatodea_contig11760:5747..60871694079099.6063442-CDS-S-dermatodea_contig11760:5747..6087Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11760 5748..6087 +
1622924216.427236-CDS-S-dermatodea_contig11760:7129..73081622924216.427236-CDS-S-dermatodea_contig11760:7129..7308Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11760 7130..7308 +
1694079099.6204462-CDS-S-dermatodea_contig11760:7129..73081694079099.6204462-CDS-S-dermatodea_contig11760:7129..7308Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11760 7130..7308 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11760.1113.1prot_S-dermatodea_contig11760.1113.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11760 5748..7308 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11760.1113.1

>prot_S-dermatodea_contig11760.1113.1 ID=prot_S-dermatodea_contig11760.1113.1|Name=mRNA_S-dermatodea_contig11760.1113.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=173bp
AKRKSKERRGVAMSDSASASPANPAEEHEEDLELNSSPGRSASDATQLSP
IAPFVSKTYGIVNGESEDIVSWWTSVGEDTFVIKRVDVFQEQVLPRFFSH
KNYSSFVRQLNNHGFSRVRSPSSAVGNAGDGRGKRPDHEAQWWEFKHPKF
RRGRKGLLSEIKRRKEKKRSVSS
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mRNA from alignment at S-dermatodea_contig11760:5748..7309+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11760.1113.1 ID=mRNA_S-dermatodea_contig11760.1113.1|Name=mRNA_S-dermatodea_contig11760.1113.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1562bp|location=Sequence derived from alignment at S-dermatodea_contig11760:5748..7309+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GCAAAGAGAAAGTCGAAGGAACGTCGCGGTGTTGCGATGTCCGATTCTGC
GTCCGCTTCCCCCGCTAACCCGGCAGAGGAGCACGAAGAGGATCTCGAGC
TGAACTCCTCGCCAGGGCGGTCTGCCTCGGACGCGACGCAGCTCTCGCCA
ATCGCGCCTTTCGTTAGCAAGACGTACGGGATCGTCAACGGCGAGTCCGA
GGACATCGTGTCCTGGTGGACGTCGGTCGGAGAGGACACGTTCGTCATCA
AGCGCGTGGACGTTTTTCAGGAACAAGTGCTGCCCCGATTCTTCAGCCAC
AAGAACTACTCCTCATTCGTGAGGCAGCTCAACAACCACGGTGAGGGGAG
GAAAGGAAAGTGCGAGAGACTGCTGTTGTGCCGGGCGCGTAATGCGGAAA
AGAGCGAGATGGCGTATTTCCCACCACTGCTGCTTGCTTTTCGCGCCCTC
TCCCGTCTCCCCGCCCGGCCGGGCTCCTCTTTCCTGAAGAGTTTAGGTGT
CCCGTCAACCACATACGTTGACATAAAACAACACGCACTCCCCGCGCGAA
ATAAGTTTTTTGCCCTTTCTCTTCGCTGGATTTCGTGAATGAAAAAAGCA
AAAAAGACCTTACAGTCAGCTAGTGGTCTCCAGTCTGTAGTTCTGTATGA
TACGATCCCCACGAACCAAGAGGCGAGTCTACAGAACTCGTCTTTCCCTG
TGAATATAAAAAAAGGACGGGGAAAACGATGATGGCAGTGTCTCAAGACT
CGTGACTCGTCATGGCCCGAGAAGCGGCGCACGTACGTTCTTCGCCTTCT
CGCCCCCTGCTGTGCCCTGGCCGCGCCGACTTCTTGCTTGCTCCACCCAA
AATCCCCTCTTCGGGCGCGCCGCGCCGATGGGGAATATCGTTGCGACCCG
CCATTGCCCCCCTCTGGTAGACAAGTGGAAGTGGATAGTTTTTTCTGTCG
CCCCTCGCTTTCAAGATCTATGATACAGCAGTATGATACCCACTCTCCAC
TTGTATCATACAACAGCAGTACTTGCATATTTATTATAAAAAATCATGAT
CTATAATAGTTCACCTGTACATCCCTGACTCACGGGCACACTTGTTCAAG
GGAAACCGAGAGTAGGTACGTCCTTGACTCTTTCGGTATGATAAGGCATA
TGTGAAGGTGGGACTCTAAGTGTACAGTTGAACTATTAATATTAAAAGTG
TTTACAGTATACATGGCGCGACAAGAAAAACGCCGCGTCCAAATCGTTAC
ATTGTACAAGAAAGTCAGCATGAATCCCCGCGTGTGTGTACCGCCGGTCA
ACACAAGTTCTCGGGGAAGAATGATAGCTCTGAAGTTTTATGTTTTGATT
TTTGTTCGTATGGGCCGGGCGGGGATGAGCAGGGTTTAGCAGGGTCAGAA
GCCCTTCCAGCGCGGTCGGGAACGCGGGCGACGGGCGAGGGAAGCGACCG
GACCACGAGGCGCAGTGGTGGGAATTCAAGCACCCCAAGTTTCGGCGGGG
GCGCAAGGGCCTTCTCTCGGAGATCAAGCGACGGAAAGAGAAGAAGAGAT
CCGTGTCAAGCA
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Coding sequence (CDS) from alignment at S-dermatodea_contig11760:5748..7309+

>mRNA_S-dermatodea_contig11760.1113.1 ID=mRNA_S-dermatodea_contig11760.1113.1|Name=mRNA_S-dermatodea_contig11760.1113.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1038bp|location=Sequence derived from alignment at S-dermatodea_contig11760:5748..7309+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GCAAAGAGAAAGTCGAAGGAACGTCGCGGTGTTGCGATGTCCGATTCTGC
GTCCGCTTCCCCCGCTAACCCGGCAGAGGAGCACGAAGAGGATCTCGAGC
TGAACTCCTCGCCAGGGCGGTCTGCCTCGGACGCGACGCAGCTCTCGCCA
ATCGCGCCTTTCGTTAGCAAGACGTACGGGATCGTCAACGGCGAGTCCGA
GGACATCGTGTCCTGGTGGACGTCGGTCGGAGAGGACACGTTCGTCATCA
AGCGCGTGGACGTTTTTCAGGAACAAGTGCTGCCCCGATTCTTCAGCCAC
AAGAACTACTCCTCATTCGTGAGGCAGCTCAACAACCACGGCAAAGAGAA
AGTCGAAGGAACGTCGCGGTGTTGCGATGTCCGATTCTGCGTCCGCTTCC
CCCGCTAACCCGGCAGAGGAGCACGAAGAGGATCTCGAGCTGAACTCCTC
GCCAGGGCGGTCTGCCTCGGACGCGACGCAGCTCTCGCCAATCGCGCCTT
TCGTTAGCAAGACGTACGGGATCGTCAACGGCGAGTCCGAGGACATCGTG
TCCTGGTGGACGTCGGTCGGAGAGGACACGTTCGTCATCAAGCGCGTGGA
CGTTTTTCAGGAACAAGTGCTGCCCCGATTCTTCAGCCACAAGAACTACT
CCTCATTCGTGAGGCAGCTCAACAACCACGGGTTTAGCAGGGTCAGAAGC
CCTTCCAGCGCGGTCGGGAACGCGGGCGACGGGCGAGGGAAGCGACCGGA
CCACGAGGCGCAGTGGTGGGAATTCAAGCACCCCAAGTTTCGGCGGGGGC
GCAAGGGCCTTCTCTCGGAGATCAAGCGACGGAAAGAGAAGAAGAGATCC
GTGTCAAGCGGTTTAGCAGGGTCAGAAGCCCTTCCAGCGCGGTCGGGAAC
GCGGGCGACGGGCGAGGGAAGCGACCGGACCACGAGGCGCAGTGGTGGGA
ATTCAAGCACCCCAAGTTTCGGCGGGGGCGCAAGGGCCTTCTCTCGGAGA
TCAAGCGACGGAAAGAGAAGAAGAGATCCGTGTCAAGC
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