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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 908 |
| Cds size | 582 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1175.1106.1 >prot_S-dermatodea_contig1175.1106.1 ID=prot_S-dermatodea_contig1175.1106.1|Name=mRNA_S-dermatodea_contig1175.1106.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=194bp
MPPALSAHDNDADSDPPADTGLVGQMNSDEKRESLDNEDESVTFVARDQI
LRDHFMTTIAKVIEDTNAASIADAGGDMLPVFPVDGDDGDDTATDNADTV
PVGQSESPCTFKGMGDKARGGKLKPHDKPMLAGQFLAGQGVLGPSTLAIT
GVGDLLLRPGCIPDPRKMPFWSHRARAPGVGCTVEMLWRKLQA* back to topmRNA from alignment at S-dermatodea_contig1175:1901..8723- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig1175.1106.1 ID=mRNA_S-dermatodea_contig1175.1106.1|Name=mRNA_S-dermatodea_contig1175.1106.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6823bp|location=Sequence derived from alignment at S-dermatodea_contig1175:1901..8723- (Saccorhiza dermatodea SderLu1190fm monoicous)
GAACTTTCGCGTCGTTGTAACGCCCGCTTCCACCGCTGGAGCCGCTTCTC
TTCGACTGTTCGGCTCGAGCACCACCGCCGATGGCTCCATCGAGGCCGAG
AAGGTGCGAGTACTCCGGTTTTGCGCATCTGATTGGTTTGTACAGCACGA
TGCGGTGGAGCCTCAGGCACGATGTCGTTGGCGCTGAGCGTTCGAAGAGT
GATGATCTGCTCGGTTGTCCGCGGTGGTGTTTGGAGGTTCCCTATTGTCG
TGCTGAAATCAATCGGTATCGTGCGGACTTTGCTGTTATCATACGTGCTT
TCTTTTGCCTGGCTCGTTGACCAGGTGGTGAAGCTGACTTCTGACACTCG
GGTGACGGAGGTCGGCTCTGACAGAATTCAGTTGACAACGGACAAGGTAA
GCTCTCCGCGGCTTTTGTTTCTATCGCTGTGGTTCGCGATCGATGGCCGC
GTCAGAGGCCAACATAGCGTTCATGGGGGCTACGTTGAAAGCACTTCCGA
GGAAGGAAATCAAACATCGACCGTTAAGCCGCGATCAACTTGTGCTGTCA
TTACCTCCAGGTGGATGAGTCGATTCAGACAACTTCTTCTTCACAAATGC
CAGGGCTCACCTCCTCAGGCGTAACGAGGACCGGCGATTTCGCATACATG
TACACCCGATCACGAGTAGGTGTATAGAAAAGCGTTGTCTTTTGTGAAAA
GGGGTAGCTTTGGTGAGTTCCATACAATTCAAACGCTGCAAGTGCCGTCG
AGGTGCCGAAAACAATGCGATCTGCTAAATACAACGTGAAAGATTCACGC
CTTCATGAGCGTTTCGAGGTCGTATTAATTCAAGAGGCGTTGGTTTAGAT
GACAGCCCATTTTTCCAAACGCCCTGGTGCATTTTCGGCGTGTCATCAAT
TTCTTTTGTTCCCTTGGTATAATATCAAACGTGCTTTTCTTCGTTTCTTT
TCCGAAAATCAACCCGAGTCCCTTGCACGATAGCACAGCGCAGGAGCCAT
CCAAATTTGCCTTGCAACGACGCTCATCACGAGTGTCGATGGGGACACAT
GCATCAGTTTTCTTTCTTTGGAGATTGAAGGTTTTCTCTTCTTCGCGGTA
CCCTCCATGTACAGCTTCTGTATTAGAAGGAAACAAAACACCGAGCTATC
CGACGGTCGCGCGATTCCATGATTCGTTTCCGGCCTCGATATTTGGGGTA
CCAACCATTCACACGGCATACTTGGATGTAATTACCGTGGCTGTTTCTTC
AAATTGGCGATATTTCTTACAAGCCGCCCATGTTTATGTCGTGTCAAGGT
CGTACCGAATGGCGGGGGAAAATGATAACCATATCGCACCACCGTTCTTC
CTCCGGTAGGAAAATAATGTAACTACAAATATTTCGGCCTGACCAAGCGG
CGCTTTCTATTTTCAGGAAATGTGGGCCGTCATCGCCGCACCCGAGATGT
TTTCTTCGAATCTTTGAATAAGCTCCAATTTCTTGTTGGGCGGGACCGAT
CTTACATGTTGGATTTTGGCCCCCAGTATCTCATGGTTGGCATCGTTCAA
TAGGGAGTTCGGCGAAGAGGAATCTCCGTGGCTAATTCTCGTGGCGAGCG
ACACTTTGGCCGACTCTTCGCCAAGGCCCACGAAGTACTGGAGTGATTTG
ATAAGGACCCGGAAATTACTTGATGTAGCCTTATCGGGGAAGTTCACGGC
GTTTGGGGAGCAGTTGCCCTCGCTACACACTCACGTATATGGAATTCCCC
GCAAACACCGACACGCCGTCATAACTTCGTTGGAGTTTCCGTGGCAACCC
CTAAGTGATGAAAATGGAACTATGTGTGCATGGCAAACACCCTAATGCCC
CCAAGACTCGCCTCATCAAAGGAGGTTTTAAAGGCTTTAGCTAACGTTCG
AAGCTGTTCCCCGCATAGCAGACAGAGAGGCAAGGTGCTCAAATCACCAC
TATCCCACATTCTGTAAGGCAGAGGGCTATAGCAACGGCAGCGTGCTTAC
AGCGGCACACAATCCAAGGTACACATAAGTTGTCGGTCCTGTTCGCGATC
GCGAGAACCCCATGCCTCCCAGCTCTCAACTGCTCCCGCCCCCCTCCAAA
CCCACACCGGTTCCCCGTCAGCCGATTTCGCTCGCAACCGCTCCACCCTC
TCGATCTCCGTCAGCCGACTTGCGATCGTGATTGTTCATGCACAAGCTCT
GGCAATCATTCTCCCTGCTCAATATATTATGCATGCCCTAGTTTGCGTGA
CGCATCAGGCCCCGCTCAACCCCTATGCTCTTCGTTGCCTCACACCTGAC
GACCAAACGACCGATCCCACCCGGTATTTCCTCAGCAATCGGTTACGTTC
ATCGCGCACGACCGAGAGGAGCGCGACGACTTCATCAGCACAATCACCAA
GGTCATCGATGCCACCAACACCGCCTGGGTCGCCGATGCCGCCGGAACGA
TGCCGCCCGCTCTCTCTGCGCACGACAATGATGCTGACTCCGACCCCCCC
GCAGACACGGGTTTGGTTGGCCAGATGAACAGCGACGAGAAGAGGGAATC
TCTGGACAACGAAGACGTGAGGATGCGACCGAGTGCACTAGGCACCGGCG
TGGTGGAAATGTTATGTTAATAGGGCTTGTTGTACAGGTTGAGGCGTTCG
GTGGTTGGAAAATTATTGCTGCGTGTTGAAGCATGGCACGCCATCGGGAC
TTACGCGTATCGTAGAGCACAGGTCATTTGTGGGCAAGCAGCGTCGTTTC
GCGAGGGAGATGGGAAGGGGGAAGAGGACGAGGCGTTTTTCATTATCGCA
TGACTAAGCCGTGTAAAATGGTGGGCCTCTCCGTTTGATACGAATTTCAG
GACAGAGATAGATTCAACAGTAAGGAGAAACGGAGACCATGGACAACTAT
AATAGTCGTGACATCGTAAATTGCGCTGTAGACGAGATACGTGTTGCAAA
CTTCTCAAGTCAATGCGCGTCTTTTACGCGAAAGTTGCCTGCGGACGGTC
GGACGGTTTGCCTCATGCAGCGAGTGCTGGCGAAGTGGTGACTTTCTCGA
AATACCCTTCCTCAATAATTATCAAGATCACAGGACCTTGCCTCGGATTA
TGCGGCTGCTCTCTTCGAACGGATGATGATTAGGATTATTTTCCTGCCCA
ATTGCACCACAGTTCCAGCTACGCGTGGTGCGGAGGCTCCGAAAGGACAA
GAACTTTCAAGTTGTGGTGACCCCTGCTTCCCCCGCCGGAGTCGCTTCTC
TTCACCTCTTCGACGCGAGCGCCACCTCGGATGACTCCATCGAGGCGGAT
AAGGTGCGATTACTCAAGTTTTGTGTATCTCATTGGTTTGTACGGCACGA
TACGGTGGAGCCTCAGGCACGGTGTCGTTGGTGCTGTACGTCCTCGAGTT
CTTCAAGTGTGACTGCTTGCCTCGGTAGTCCGCGGTGTAGTTAGGAGGTT
ACATATTGTAGTGCTGACATGGCTGCTGCTATCATACATGCTCGCTTTTG
TCCGTCTCGTTGACCAGGGGGTGAAGCTCACTTCTGACACTCATGTGACG
GAGGTCGGCAAGAACAGAGTCCGGCTGACAACCAAGCAGGTAAGCTCTCC
TGGGTCCTGTTTCTATATTTCGTTTGCGGTCGATGACCTCGTCAGACGCT
TAGTTCATAGAGGTTTTGTTGAAAGCACCTCCGAGGACGGGGATCATACA
TCCAGCACTCCAGCTGCGTGTACTACATTATTTGTGCTGTGGTTGCCCAC
TTGGGGGTGACACGATCATGATAACTTCTTCTTTACGAAATGCTAGGGGC
CACCTCCTCGGGTGGAGGCCAGGAGAGTCGATATTTCATTGATCCGACAA
GTACGTGTCTAGCAAATCCTTCTCTTTACTGGTTTGGTGTACGTAGATTC
GATAAGCTGACGAGGGTCCAACACCTGGCGAAAACAATTCGATGGAAACG
GCCACACCCCTCTTGGGCGACGATTTGCACAACGAGAACCTAGCAGATTC
CGTCTTCCAGGAGCTTTTCGAAGTCGCAACGAAATCCGGAGACATTGGTT
TCGTTGAAATATAGTAACGTCAACGTTTGTTAGCGTCCCATTCTAGTCGA
ACGTCCTGGTGTATTTTCAGCGTGTCATTTTTTATCACTTGGCACACAAA
CAAACACACTCCTTTGGTTCTTCATCTAACGGCTGCCTAGAGTGCTTTGC
AGGATAAGCACACTTCGCAAGTTGGTGGGAAACGACGCGCATCGTGAATA
CGGAAGATATCACTGCATCATACGTCAATTTAAAGGTCTCCATCCTTTCC
GGTATCCTCTACATCCCGTTTCGGCATAAGGAAACAAATGTCCCGAAAGC
ATATCCCACGATCGCGCCGGTTTCACGCTGCGCTCCTGGCTTTGAGTTTT
GACACGTCAAACGCTCACAAAACGGCGTCTACAATTTCCCGGTTTTGGTA
CCTTCGCTCTAAACACCTCGAAATTGATGAGTTATCGTAACAAATCTTCT
TTCAGTAGTAATCTGTATACTTTTCGTACCGACTAGATGGGGGCAAATTA
GTAGTCGGCAGCACCACTGTCCTTCCTCACTACTGTCACCTCGCAAAAAA
ACTTGGGCCTGACCGGGTGCTGCTCGTTTTTTCAGGAAAATTAAACCGCA
GTCACCGCATCCGAGTTGTTTCCTTCGACCCTTTGATTTATCTCCACTAT
ATATGTGAAAACACTGATTAAAATAAGTCATATTTGACGTGAGTTTTTCG
GCCTATCGTTGGACTAATTCAAAAGGCGATTAAAGAAGCCGAATTTCCCA
GGACGATTCAAGTGGTAACGATTACTTCGGCGGCACCTCACAAAAATCCA
CGAAGTATTTCAGTGACATCGGGCAGCACACGGAAACCTGTAAAGTTTAC
AATAGCCATGTGGGGAAAGTGCCGGGCGTCCGTGTCGTAGAGAAGTATTA
AGGGTGCTCAAATCGCCGTTTACCTACATTCTGTATATCTTGTTGGGATA
TGCTATTATAGTGCTACACCGTCATGCTAGCGGTACACAATCTGAGCTTC
CTGGTACACATGAATCGATTCAGGTGGCGATCGCGACAACGACACGCCCG
ACTCTCGCCTTCTCCACCCCCCGGATCCGCGTGGGGCAGAATTGCGATCG
TGGCCGATCACGCGTGCACTGAGCTTTAAAATTCCGTTCCCCCTCAAGGC
TCAACGCCGGTCTCCTCAACGCCCGTCCAAACTATAAAACGCCGCTCGAT
TCCCCCACATACTGTTTATCACACATCGTCCCTGACGTCCGTCCTATTGA
TCGCCCTCGTTTGTTTCCCAGGAATCGGTTACCTTTGTCGCCCGCGACCA
GATTTTGCGAGACCACTTCATGACCACCATCGCTAAGGTTATAGAGGACA
CCAACGCCGCCTCGATTGCTGATGCCGGTGGAGACATGCTGCCTGTTTTC
CCAGTGGATGGCGATGATGGCGATGATACCGCCACCGACAACGCTGATAC
GGTTCCCGTTGGCCAGGTGAGGAGCAATGAAGAGGAGAAAGTCCCTGGTC
ATGAAATACTTGATTGTGGTGACTACCTACACTGTGCATACCAGCGTGAG
GTCGGGCTTTCATAGGAGATCACAGTATTGCTCCGTGGTTGGTTTGCACA
CTTCTTGCTATTTGTAGCGAGGCGGGCGCTGTGCTTCGGTAAGGTCCTGG
GGAAGCGTCTTCAAAGGGATACAACTAATGCGGTGGGCGTCTGTCTTTTA
TGCCTTGATCAGAACAAGTTGTTTATCCCATCCATTTGATATTGGAAGCG
TACCATGGTATCGATCGTCCCGCTCTAAGCTGTAACTTCTTGGCAGCAAA
ACCAGGGCGGTACCAGAAGCTATCGGGTTCAATCAGGATCACGACCGCCC
ATCCCCACCAGATTTACGCCACGGAACTCTTAGTTGAGATTACTGTACAC
CTACGGACGGAACTTGTACCCAACACCTCGGCGGCAGATTAAAATTTGTG
TTTGTTTGGAATTGTGTTGGACTAGACGTGCTCGACACAGCGGCGCCAGT
TAGGTGGTCGACACCCAGCTTTGGCGAGAATATCCCTAAAGCTTTGACAC
CAGCGTCTCCCCCCCGGGCCTCTACCATAACACCGCCGTTCGTTGGGAGT
TTTTACGCACTTCCAAGGACCAAATATATATAGCTCTATGGCGTCTGGTG
ATATTACTGCAGCCACGTCACAGAGGCACGTAAAACGAGCCCCCGATACA
GTGGAATGTTCTTCGTATTATCAACCTCTGAGGGGCTCCGCAAACGACGA
AGTAACAAAGTTCCGCGCAGCGAGGTAGCCAGCTACAAAACTATCATTAT
CTTCGACGAACAATCCGTGCCCAGTGGCAATGTCACACTCTAATTCTGCA
CCGAACGCACTCCATGACCGGCGAAAAACCACCCTAAACGGCCTGCTCAC
GCCCGCCCGACCATTCCTCCCACGTTTCACGCTCGTTCGTTGACCCAAAC
GGAAACGACGAAACAGAGCGAGTCGCCCTGCACCTTCAAAGGTATGGGGG
ACAAGGCGAGGGGGGGCAAGCTCAAGCCCCACGACAAGCCGATGCTGGCC
GGGCAATTTCTTGCCGGCCAGGGCGTCCTGGGGCCTTCTACCCTGGCCAT
CACAGGTGTCGGCGACCTGCTTCTGAGGCCCGGTTGCATACCGGACCCCA
GGAAGATGCCGTTCTGGTCACACCGGGCGAGGGCCCCCGGTGTGGGCTGT
ACGGTAGAGATGCTGTGGAGGAAGTTACAGGCCTAGAAGCCATCCCCATA
TCTCTGACTGTCCGGAATGGGCG back to topCoding sequence (CDS) from alignment at S-dermatodea_contig1175:1901..8723- >mRNA_S-dermatodea_contig1175.1106.1 ID=mRNA_S-dermatodea_contig1175.1106.1|Name=mRNA_S-dermatodea_contig1175.1106.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1164bp|location=Sequence derived from alignment at S-dermatodea_contig1175:1901..8723- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCCGCCCGCTCTCTCTGCGCACGACAATGATGCTGACTCCGACCCCCC
CGCAGACACGGGTTTGGTTGGCCAGATGAACAGCGACGAGAAGAGGGAAT
CTCTGGACAACGAAGACATGCCGCCCGCTCTCTCTGCGCACGACAATGAT
GCTGACTCCGACCCCCCCGCAGACACGGGTTTGGTTGGCCAGATGAACAG
CGACGAGAAGAGGGAATCTCTGGACAACGAAGACGAATCGGTTACCTTTG
TCGCCCGCGACCAGATTTTGCGAGACCACTTCATGACCACCATCGCTAAG
GTTATAGAGGACACCAACGCCGCCTCGATTGCTGATGCCGGTGGAGACAT
GCTGCCTGTTTTCCCAGTGGATGGCGATGATGGCGATGATACCGCCACCG
ACAACGCTGATACGGTTCCCGTTGGCCAGGAATCGGTTACCTTTGTCGCC
CGCGACCAGATTTTGCGAGACCACTTCATGACCACCATCGCTAAGGTTAT
AGAGGACACCAACGCCGCCTCGATTGCTGATGCCGGTGGAGACATGCTGC
CTGTTTTCCCAGTGGATGGCGATGATGGCGATGATACCGCCACCGACAAC
GCTGATACGGTTCCCGTTGGCCAGAGCGAGTCGCCCTGCACCTTCAAAGG
TATGGGGGACAAGGCGAGGGGGGGCAAGCTCAAGCCCCACGACAAGCCGA
TGCTGGCCGGGCAATTTCTTGCCGGCCAGGGCGTCCTGGGGCCTTCTACC
CTGGCCATCACAGGTGTCGGCGACCTGCTTCTGAGGCCCGGTTGCATACC
GGACCCCAGGAAGATGCCGTTCTGGTCACACCGGGCGAGGGCCCCCGGTG
TGGGCTGTACGGTAGAGATGCTGTGGAGGAAGTTACAGGCCTAGAGCGAG
TCGCCCTGCACCTTCAAAGGTATGGGGGACAAGGCGAGGGGGGGCAAGCT
CAAGCCCCACGACAAGCCGATGCTGGCCGGGCAATTTCTTGCCGGCCAGG
GCGTCCTGGGGCCTTCTACCCTGGCCATCACAGGTGTCGGCGACCTGCTT
CTGAGGCCCGGTTGCATACCGGACCCCAGGAAGATGCCGTTCTGGTCACA
CCGGGCGAGGGCCCCCGGTGTGGGCTGTACGGTAGAGATGCTGTGGAGGA
AGTTACAGGCCTAG back to top
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