mRNA_S-dermatodea_contig11702.1084.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11702.1084.1 vs. uniprot
Match: D8LNG2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG2_ECTSI) HSP 1 Score: 470 bits (1209), Expect = 8.850e-160 Identity = 239/363 (65.84%), Postives = 284/363 (78.24%), Query Frame = 2
Query: 2 QVGMHPMVASADASCKVYSAALTLDAHSLFEKIELGQGRFALRAFSNRRFLRVVPPEES---QEWYVWTLEVGAQEIGLPEVFQMRNGMVYNEIMHGYLSCSGAGSEAEVKGFVGDYPYQAEANYQLAFNPVSGEDMERARLLRDLSNAVDAAQRREAEEYVSRQSLSRLERQQKQPVETIAICVPMTSRSTLMDSTYDSPVWTHAFETFLSTTDWRSRRFRYHWYLGFDVGDPIYDGPDAVKNMENAFFGGAKSVRAFKRLGFSPQDA-HAIILHVLRLKPTYYDGLEHAPSYVVSSLIKDAYDDGCDYFYQINDDTLMVSPHWAETFTTILRENPLGRNVGVTGPEDTNNVRILTHAFVHR 1078
QVGMHPMVASA+A CKVYSAA +LD H+LFEKIELG+GRFALRAFSNRRFLRVVPP + +W VW LEVGA E+GLPEVFQMR+GMVY+E+MHGYLSCSGAG+EAEVKGFVG+Y +Q E +YQL F+ VS E +ERARLLRD+S AV+ Q+REA+EY+ R ++ + TIA+C+PMTSR TLM+S YDSPVWTHAF TFLS+TD+ RFR+HWY GFD GDPIYD A ++ F G ++ F+R G + D H LRLK +Y G+EHAPSYVVS+L++DAYDDGCDY YQINDDTL+ +P WAE FT+ LR+NPLGRNVGVTGP DTNN RILTHAFVHR
Sbjct: 163 QVGMHPMVASAEAGCKVYSAATSLDPHALFEKIELGEGRFALRAFSNRRFLRVVPPPPTTGWSDWTVWALEVGAPEVGLPEVFQMRDGMVYSEVMHGYLSCSGAGAEAEVKGFVGEYLWQNEESYQLIFDQVSHEAVERARLLRDVSRAVNYRQQREADEYIEAAERDAERRNNRKRI-TIAVCIPMTSRGTLMNSPYDSPVWTHAFSTFLSSTDFGHPRFRFHWYFGFDAGDPIYDAAGAAAHLHKQF--GKLAIEEFRRQGLTANDVEHRWRDGSLRLKAKHYLGMEHAPSYVVSALMQDAYDDGCDYLYQINDDTLINTPGWAEVFTSALRDNPLGRNVGVTGPADTNNRRILTHAFVHR 522
BLAST of mRNA_S-dermatodea_contig11702.1084.1 vs. uniprot
Match: A0A7S0SZW8_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZW8_9STRA) HSP 1 Score: 203 bits (517), Expect = 7.530e-57 Identity = 129/343 (37.61%), Postives = 184/343 (53.64%), Query Frame = 2
Query: 80 HSLFEKIELGQGRFALRAFSNRRFLRVVPPEESQEWYVWTLEVGAQEIGLPEVFQM-RNGMVYNEIMHGYLSCSGAGSEAEVKGFVGDYPYQAEANY-QLAFNPVSGEDMERARLLRDLSNAVDAAQR----REAEEYVSRQSLSRLERQQKQPVET-IAICVPMTSRSTLMDSTYDSPVWTHAFETFLSTTDWRSRRFRYHWYLGFDVGDPIYDGPDAVKNMENAFFGGAKSVRAFKRLGFSPQDAHAI---ILHVLRLKPTYYDGLEHAPSYVVSSLIKDAYDDGCDYFYQINDDTLMVSPHWAETFTTILRENPLGRNVGVTGPEDTNNVRILTHAFVHR 1078
H++FEKI L G FALR+ ++ + ++PP W L +G IG E F++ G +Y+ + G L CS S+ VKG+ Y Y + F V+ D+ A+ L LSN + Q+ + + +R+S + P I I VPMTS+ T+M +SP WT+ F+TF+ + DW S R+ Y +YLGFD GD +YD D+ +N+ F S RA R+ D + I + L +K +D L+ AP+ VVS L+ AY D DYFYQ+NDDT++V+P+W L NP N GVTGP DTNN +ILTH+FVHR
Sbjct: 117 HAMFEKIILANGEFALRSLGSKLLVSIIPPPSDHSELPWKLVIGGPSIGTAERFRLTEEGYIYSVALDGLLQCS---SDQMVKGYSSTY-----GTYNKFIFERVNNSDVFEAQKLVHLSNQILDIQQNYLLQNQKSLQARKSAFNIVNSIDNPNPLKICIAVPMTSKGTVMKDVTESPFWTNLFDTFMKSVDWHSNRYIYRFYLGFDRGDNLYDVGDSWQNIREEF-----SHRAIYRMTEQMLDENEIKNVLDKQLSIKLLDFDHLQGAPTQVVSQLVLTAYVDNFDYFYQVNDDTMIVTPNWVPKLVEKLASNPSIPNFGVTGPTDTNNEKILTHSFVHR 446
BLAST of mRNA_S-dermatodea_contig11702.1084.1 vs. uniprot
Match: A0A6V1PYQ3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PYQ3_HETAK) HSP 1 Score: 163 bits (412), Expect = 1.840e-42 Identity = 99/275 (36.00%), Postives = 149/275 (54.18%), Query Frame = 2
Query: 260 VYNEIMHGYLSCSGAGSEAEVKGFVGDYPYQAEANYQLAFNPVSGEDMERARLLRDLSNAVDAAQRREAEEYVSRQSLSRLERQQKQPVET--IAICVPMTSRSTLMDSTYDSPVWTHAFETFLSTTDWRSRRFRYHWYLGFDVGDPIYDGPDAVKNMENAFFGGAKSVRAFKRLGFSPQDAHAIILHVLRLKPTYYDGLEHAPSYVVSSLIKDAYDDGCDYFYQINDDTLMVSPHWAETFTTILRENPLGRNVGVTGPEDTNNVRILTHAFVHR 1078
+++E++ YL C G G+ A KG G + + + E + A LRD+S+ ++ R E E+Y+ + + + Q + ++T IAI +PMTS+ T M S +SP W + F+TF + DW + R ++ +++GFD GDPIYD D+ + F A +++ G SP+ I+ L ++ + L APS VV+ L AYD G DY YQINDDT + + W F L NP+ N GVTGP D+ N +I THAFVHR
Sbjct: 15 LHSELLQDYLQCPGGGAAAAAKGVPGSAYHGGGPDAVFRPTAAAAEAVTTAIRLRDMSSHINRLHRNETEKYIMKHASHYQKEQITETIQTASIAIIIPMTSKGTEMTSVKESPFWFNTFQTFCYSIDWAANRNKFTFFIGFDKGDPIYDLGDSWNDFRKEFKSNAGMGISWQT-GMSPEKVTNILETQLAVELHDFGDLAGAPSQVVNRLAGLAYDAGFDYIYQINDDTEIETKQWHLKFMKALASNPVFPNFGVTGPTDSLNPKIFTHAFVHR 288
BLAST of mRNA_S-dermatodea_contig11702.1084.1 vs. uniprot
Match: A0A7S3ZR36_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZR36_9STRA) HSP 1 Score: 155 bits (391), Expect = 4.830e-39 Identity = 121/373 (32.44%), Postives = 168/373 (45.04%), Query Frame = 2
Query: 44 CKVYSAALTLDA-----HSLFEKIELGQGRFALRAFSNRRFLRVVPPEESQEWYV-WTLEVGAQEIGLPEVFQMRN---------------------------------GMVYNEIMHGYLSCSGAGSEAEVKGFVGDYPYQAEANYQLAFNPVSGEDMERAR-LLR------DLSNAVDAAQRR-------EAEEYVSRQSLSRLERQQKQPVET----IAICVPMTSRSTLMDSTYDSPVWTHAFETFLSTTDWRSRRFRYHWYLGFDVGDPIYDGPDAVKNMENAFFGGAKSVRAFKRLGFSPQDAHAIILHVLRLKPTYYDGLEH------APSYVVSSLIKDAYDDGCDYFYQINDDTLMVSPHWAET 973
C ++S DA H LFE + L LRA SN +F RV P + W WT+E + GL E FQ+RN M+Y+E+M G++ C+G G V+GF G+ ++ +Q M +AR LLR +L DA +R E E S + RL R+ +++ +AI VPMTSR T MD SP+W + F +F+ + DWR R +H+YLGFD GD +YD DA M AF AK +A + LG+ + + KP L H APS VS + + A +G DY YQ+NDDT++VS W T
Sbjct: 125 CHLFSGLDVKDAPAVGPHELFEVVPLDDDAVGLRALSNGKFARVRAPGDEAAWDAPWTVEFASPLPGLAERFQLRNVPKPSAQDDVVKAQDDPWSGVTTTETKAWAPSFRMLYSELMRGFIQCNGGGVSEPVRGFSGEAADESRVEFQFNLTRADAATMAKARELLRASKHAEELRAKADANRRARLLAASAERGEKFSLKPGERLPRRGPSALDSGSLKVAIVVPMTSRGTDMDGVEQSPLWFNLFASFVESVDWRKNRHTFHFYLGFDKGDDLYDTGDAWSEMRRAFRAHAK--KALRWLGYGNFTVARVADGIDGSKPAVDLTLVHFSDTAGAPSQAVSQMARMAVGEGADYIYQLNDDTILVSKDWLAT 495
BLAST of mRNA_S-dermatodea_contig11702.1084.1 vs. uniprot
Match: A0A7S2MG38_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MG38_9STRA) HSP 1 Score: 148 bits (373), Expect = 1.000e-38 Identity = 79/182 (43.41%), Postives = 105/182 (57.69%), Query Frame = 2
Query: 533 IAICVPMTSRSTLMDSTYDSPVWTHAFETFLSTTDWRSRRFRYHWYLGFDVGDPIYDGPDAVKNMENAFFGGAKSVRAFKRLGFSPQDAHAIILHVLRLKPTYYDGLEHAPSYVVSSLIKDAYDDGCDYFYQINDDTLMVSPHWAETFTTILRENPLGRNVGVTGPEDTNNVRILTHAFVHR 1078
+A+CVPMTS+ T M + SP W + F +F+ + DW + +YLGFD GDP+YD DA + F G + RA L ++ L L +D + +PS VV L AY DG DY +Q+NDDT++VS WA++F L N + N+GVTGP DTNN RILTHAFVHR
Sbjct: 12 VALCVPMTSKGTDMVTVDQSPFWFNLFASFMESIDWEKNEIEFSFYLGFDRGDPLYDTGDAWGEIRRTF--GKNTRRALTWLNTPNATQAKVLKQGLILHLMDFDLPKGSPSQVVVGLANAAYKDGIDYMFQVNDDTVIVSHDWAKSFIRALESNTIHPNLGVTGPVDTNNDRILTHAFVHR 191
BLAST of mRNA_S-dermatodea_contig11702.1084.1 vs. uniprot
Match: A0A7S2FLT9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FLT9_9STRA) HSP 1 Score: 135 bits (340), Expect = 2.690e-34 Identity = 82/227 (36.12%), Postives = 125/227 (55.07%), Query Frame = 2
Query: 320 VKGFVGDYPYQAEANYQLAFNPVSGEDMERARLLRDLSNAVDAAQRREAEEYVS-RQSLSRLERQQKQPVET------IAICVPMTSRSTLMDSTYDSPVWTHAFETFLSTTDWRSRRFRYHWYLGFDVGDPIYDGPDAVKNMENAFFGGAKSVR-AFKRLGFSPQDAHAIILHVLRLKPTYYDGLEHAPSYVVSSLIKDAYDDGCDYFYQINDDTLMVSPHWAETF 976
VKGF G+ Y+ Y V+ +M A LR+ S ++A Q ++ ++ R++ + + + ET IA+ VPMTSR T M + SP W + F +F+ + DW + + + +YLG D GD +YD DA +M +AF AK+ R A L + +++ L LK ++DG APS VV L++ AYDDG DYF+Q+NDDT++VS WA +F
Sbjct: 4 VKGFPGETLYEDSDVYHFNMTKVTASEMATALQLREASKHIEAVQTKQLRSALALRKATGAMSARNTRKAETARDGTKIALVVPMTSRGTDMSAVEQSPFWFNLFASFMESVDWDNNKHEFTFYLGLDKGDSLYDTGDAWSDMRSAF---AKNTRRALTWLNVNNSTQKSVLGDQLHLKLMHFDGTSGAPSQVVCGLVQQAYDDGVDYFFQVNDDTVIVSKDWASSF 227
BLAST of mRNA_S-dermatodea_contig11702.1084.1 vs. uniprot
Match: A0A6H5JLE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLE1_9PHAE) HSP 1 Score: 121 bits (303), Expect = 9.790e-28 Identity = 76/159 (47.80%), Postives = 90/159 (56.60%), Query Frame = 2
Query: 2 QVGMHPMVASADASCKVYSAALTLDAHSLFEKIELGQGRFALRAFSNRRFLRVVPPEESQEWYVWTLEVGAQEIGLPEVFQMRNGMVYNEIMHGYLSCSGAGSEAEVKGFVGDYPYQAEANYQLAFNPVSGEDMERARLLRDLSNAVDAAQRREAEEYV 478
QVGMHPMVASA+A CKVYSAA +LD H+LFEK VGA EIGLPEVFQMR+GMVY+E+MHGYLSCSGAG+E VS + +ERARLLRD+S AV+ Q+REA+EY+
Sbjct: 242 QVGMHPMVASAEAGCKVYSAATSLDPHALFEK------------------------------------VGAPEIGLPEVFQMRDGMVYSEVMHGYLSCSGAGAE------------------------VSHKAVERARLLRDVSRAVNDRQQREADEYI 340
BLAST of mRNA_S-dermatodea_contig11702.1084.1 vs. uniprot
Match: A0A7S3HKB2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HKB2_9STRA) HSP 1 Score: 117 bits (294), Expect = 3.030e-26 Identity = 77/227 (33.92%), Postives = 116/227 (51.10%), Query Frame = 2
Query: 80 HSLFEKIELGQGRFALRAFSNRRFLRVVPPEESQEWYVWTLEVGAQEIGLPEVFQM-RNGMVYNEIMHGYLSCSGAGSEAEVKGFVGDYP-YQAEANYQLAFNPVSGEDMERARLLRDLSNAVDAAQRREAEEYVSRQSLSRLERQQK-------QPVETIAIC--VPMTSRSTLMDSTYDSPVWTHAFETFLSTTDWRSRRFRYHWYLGFDVGDPIYDGPDAVKNM 727
HS+F+ G FALR+ +N RF++ VPP W L +G IG E F+M +G +++ +M G+ +C G G V G G Y Y ++A +S E + + +L DLSN + Q +Y+ LS ER+ + + IC VP+TS+ T M DSP WT+ F++F+ + DWRS R+ + +YLGFD D +YD DA +
Sbjct: 167 HSMFDLEPSEDGSFALRSVANGRFVKTVPPPADNSLAPWKLVIGGSLIGAAERFRMTEDGKLFSALMSGFFTCGGYGQM--VSGNAGQYSQYNSKA---FIMEKISPEIVRSSYMLLDLSNQIMNIQ----SDYIKSNQLSPKERKSAALGVTGMENANPVKICLGVPITSKGTEMKDVSDSPFWTNLFDSFMKSVDWRSNRYVFRFYLGFDKADSMYDTGDAWSEL 384
BLAST of mRNA_S-dermatodea_contig11702.1084.1 vs. uniprot
Match: A0A812U7Y0_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812U7Y0_SYMMI) HSP 1 Score: 103 bits (257), Expect = 3.030e-22 Identity = 50/91 (54.95%), Postives = 65/91 (71.43%), Query Frame = 2
Query: 806 IILHVLRLKPTYYDGLEHAPSYVVSSLIKDAYDDGCDYFYQINDDTLMVSPHWAETFTTILRENPLGRNVGVTGPEDTNNVRILTHAFVHR 1078
I+ + L LK + +D L+ APS VVS L+ Y D DYFYQ+NDDT +V+P+WA F L++NPL NVGVTGP DT+N +I TH+FVHR
Sbjct: 31 ILQNQLILKLSDFDHLQGAPSQVVSQLMLKGYSDNYDYFYQVNDDTQIVTPNWAPIFVKALQDNPLAPNVGVTGPSDTHNRQIFTHSFVHR 121
BLAST of mRNA_S-dermatodea_contig11702.1084.1 vs. uniprot
Match: A0A7S3HK59_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HK59_9STRA) HSP 1 Score: 103 bits (256), Expect = 4.700e-22 Identity = 50/95 (52.63%), Postives = 63/95 (66.32%), Query Frame = 2
Query: 794 DAHAIILHVLRLKPTYYDGLEHAPSYVVSSLIKDAYDDGCDYFYQINDDTLMVSPHWAETFTTILRENPLGRNVGVTGPEDTNNVRILTHAFVHR 1078
D +A++ L LK ++D LE APS VVS L+ AY D DYFYQ+NDDT++ SP+WA L NP N GVTGP D+NN +I TH+FVHR
Sbjct: 25 DINAVLEEKLSLKLMHFDHLEGAPSQVVSQLMLSAYMDNFDYFYQVNDDTIITSPNWAPKLVAALASNPSIPNFGVTGPSDSNNEKIFTHSFVHR 119 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11702.1084.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11702.1084.1 >prot_S-dermatodea_contig11702.1084.1 ID=prot_S-dermatodea_contig11702.1084.1|Name=mRNA_S-dermatodea_contig11702.1084.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=356bp MHPMVASADASCKVYSAALTLDAHSLFEKIELGQGRFALRAFSNRRFLRVback to top mRNA from alignment at S-dermatodea_contig11702:118..6844- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11702.1084.1 ID=mRNA_S-dermatodea_contig11702.1084.1|Name=mRNA_S-dermatodea_contig11702.1084.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6727bp|location=Sequence derived from alignment at S-dermatodea_contig11702:118..6844- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11702:118..6844- >mRNA_S-dermatodea_contig11702.1084.1 ID=mRNA_S-dermatodea_contig11702.1084.1|Name=mRNA_S-dermatodea_contig11702.1084.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2136bp|location=Sequence derived from alignment at S-dermatodea_contig11702:118..6844- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |