mRNA_S-dermatodea_contig11701.1083.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11701.1083.1 vs. uniprot
Match: D8LF38_ECTSI (Divalent metal transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF38_ECTSI) HSP 1 Score: 431 bits (1107), Expect = 2.040e-143 Identity = 218/276 (78.99%), Postives = 246/276 (89.13%), Query Frame = 1
Query: 1 QATKYYTIDSGIALLVAFLINLAVVCTFAKQFYDDSCATASVASACFVGDSIDPSQPNYGVCDVDGTGVCQEIGLSAAAAALKGTLGQSAKYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVLLTRVIALGPALAVTVFMGGDIRATDRMSAWLNVLQSLQLPFAIIPLLTFCNSQRIMGAFTISAPLTVFVWMVSVGVIGINIFIVGGFLVEQGDSKSGGE--WLYAGAALGGFLYLGFILFLMWEDLRKLRSQGCAIFMKLGTYD 822
+ATKYYTIDSGIAL+VAF+INLAVVCTFAKQFYD++CATAS SACFVGDSIDP+QP+YG CD DGTG+CQEIGLSAAAAAL+GTLG SAKY+WAVGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVL+TR+IALGPALAVTVFMGGDIRATDR+SAWLNVLQSLQLPFAIIPLLTFCNS +MG FTI++ +T FVWMVS+G+IGINI IV GFL ++G S G WLYA A+G LYLGFILFLM EDL+KLR + ++F +LG +D
Sbjct: 308 EATKYYTIDSGIALMVAFMINLAVVCTFAKQFYDETCATASEPSACFVGDSIDPTQPSYGSCDADGTGLCQEIGLSAAAAALRGTLGSSAKYVWAVGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVLVTRIIALGPALAVTVFMGGDIRATDRLSAWLNVLQSLQLPFAIIPLLTFCNSPHVMGEFTITSSMTAFVWMVSIGIIGINISIVLGFLFDEGISSEGAAAPWLYACTAIGASLYLGFILFLMREDLQKLRRRAESLFWELGRHD 583
BLAST of mRNA_S-dermatodea_contig11701.1083.1 vs. uniprot
Match: A0A835YZC9_9STRA (Divalent metal transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZC9_9STRA) HSP 1 Score: 281 bits (719), Expect = 2.000e-85 Identity = 151/261 (57.85%), Postives = 187/261 (71.65%), Query Frame = 1
Query: 1 QATKYYTIDSGIALLVAFLINLAVVCTFAKQFYDDSCATASVASACFVGDSIDPSQPNYGVCDVDGTGVCQEIGLSAAAAALKGTLGQSAKYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVLLTRVIALGPALAVTVFMGGDIRATDRMSAWLNVLQSLQLPFAIIPLLTFCNSQRIMGAFTISAPLTVFVWMVSVGVIGINIFIVGGFLVEQGDSKSGGEWLYAGAALG--GFLYLGFILFLMWEDLRKL 777
+A KY TIDS +AL +AFLINLAVV TFA QFY C + +AC SID P +G C G GVCQEIGL A AL+G+LG +AKY+WA+GLLAAGQSSTMTGTYAGQFVMEGFLQL I +WQRV+LTR IALGPAL VTV M G ATDR+S WLNVLQS+QLPFA+IPL+ FC S+R+MG FT+ +T +W++++G+IGIN++ V F + D+ + + + G LYL F L+LMWEDL +L
Sbjct: 256 EAVKYCTIDSALALGLAFLINLAVVGTFAVQFYSVDCINTRMPTACLTLGSIDRDSPTFGTC-AKGLGVCQEIGLGHAGDALRGSLGSNAKYVWAIGLLAAGQSSTMTGTYAGQFVMEGFLQLSIAQWQRVMLTRTIALGPALLVTVLMHGKGTATDRLSEWLNVLQSVQLPFALIPLVHFCGSKRLMGEFTVGRSMTALLWVLTIGMIGINLYTVLDFFFDD-DAPKESTTISSRIMIFTVGTLYLSFCLYLMWEDLLRL 514
BLAST of mRNA_S-dermatodea_contig11701.1083.1 vs. uniprot
Match: A0A4D9D1G8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1G8_9STRA) HSP 1 Score: 206 bits (525), Expect = 5.600e-58 Identity = 121/259 (46.72%), Postives = 160/259 (61.78%), Query Frame = 1
Query: 1 QATKYYTIDSGIALLVAFLINLAVVCTFAKQFYDDSCATASVAS-ACFVGDSIDPSQPNYGVCDVDGTGVCQEIGLSAAAAALKGTLGQSAKYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVLLTRVIALGPALAVTVFMGGDIRATDRMSAWLNVLQSLQLPFAIIPLLTFCNSQRIMGAFTISAPLTVFVWMVSVGVIGINIFIVGGFLVEQGDSKSGGEWLYAGAALGGFLYLGFILFLMWEDLRK 774
+A KY+ IDS IAL V+F+INLAVV FA F+D CATA AC S+ GVCD CQ IGL+ A AL LG+SAKYIWAVGLLAAGQ+STMTGTYAGQ+VMEGFL L+IP W RV TR +A+GP L V + + +DR +NV S+ L F+++P+L F +S IMG S PLT+ +W+++ GV+ INI++V ++ G + W+Y + G +YL F L+ ED+
Sbjct: 206 EANKYFAIDSAIALTVSFVINLAVVSVFAYHFFDHGCATAPGGPLACL-------SRTEEGVCD------CQLIGLAGAHDALAEALGKSAKYIWAVGLLAAGQASTMTGTYAGQYVMEGFLDLQIPLWARVTFTRFVAIGPGLVVAILTENNQNLSDRFQEAINVFNSVLLSFSLLPVLHFTSSSVIMGEHVSSLPLTITIWVLAFGVLAINIYLV---VLRIGAGQP--WWVYVVTTVVGVIYLAFSYSLVQEDIEN 446
BLAST of mRNA_S-dermatodea_contig11701.1083.1 vs. uniprot
Match: A0A067BSV6_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BSV6_SAPPC) HSP 1 Score: 197 bits (502), Expect = 4.660e-56 Identity = 118/264 (44.70%), Postives = 169/264 (64.02%), Query Frame = 1
Query: 1 QATKYYTIDSGIALLVAFLINLAVVCTFAKQFYDDSCA----TASVASACFVGDSIDPSQPNYGVCDV-DGT-GVCQEIGLSAAAAALKGTLGQSAKYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVLLTRVIALGPALAVTVFMGGDIRATDRMSAWLNVLQSLQLPFAIIPLLTFCNSQRIMGAFTISAPLTVFVWMVSVGVIGINIFIVGGFLVEQGDSKSGGEWLYAGAALGGFLYLGFILFLMWEDLRK 774
+A KY+TI+S +AL V+FLINLAV+C FAK F+ C T V +AC ++ + +YG C + +G+ GVCQEIGLS A AL+G L + ++ IWA+GLLAAGQSSTM GTYAGQFVMEGFL++++ W+RV LTR +AL PALAV ++ A+D + LNVLQS+QLPFA++P+L F + +MGAF S W V++ V +N+++V V++ D G G Y+ F+ +L+ +L++
Sbjct: 102 EANKYFTIESAVALFVSFLINLAVMCVFAKGFFSPDCLQSFETHGVNTACVPLNT--STTESYGSCQLMEGSRGVCQEIGLSGAGLALRGVLDEYSETIWAIGLLAAGQSSTMAGTYAGQFVMEGFLRIQLAPWKRVALTRAVALVPALAVAIWSDTQPGASDTIGEMLNVLQSIQLPFALLPILHFTSHAGLMGAFVNSTTTKAAGWAVALLVCLVNLYLV----VQKVDVSEMGPVSLLAFFSAGTGYVAFLAYLVHTELQQ 359
BLAST of mRNA_S-dermatodea_contig11701.1083.1 vs. uniprot
Match: W7TP25_9STRA (2-isopropylmalate synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TP25_9STRA) HSP 1 Score: 208 bits (530), Expect = 8.410e-56 Identity = 122/259 (47.10%), Postives = 161/259 (62.16%), Query Frame = 1
Query: 1 QATKYYTIDSGIALLVAFLINLAVVCTFAKQFYDDSCATASVAS-ACFVGDSIDPSQPNYGVCDVDGTGVCQEIGLSAAAAALKGTLGQSAKYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVLLTRVIALGPALAVTVFMGGDIRATDRMSAWLNVLQSLQLPFAIIPLLTFCNSQRIMGAFTISAPLTVFVWMVSVGVIGINIFIVGGFLVEQGDSKSGGEWLYAGAALGGFLYLGFILFLMWEDLRK 774
+A KY+ IDS IAL V+F+INLAVV FA F+D CATA AC S+ GVCD CQ IGL+ A AL LG+SAKYIWAVGLLAAGQ+STMTGTYAGQ+VMEGFL L+IP W RV TR +A+GP L V + + +DR +NV S+ L F+++P+L F +S IMG S PLT+ +W+++ GV+ INI++V ++ G + W+Y A+ G +YL F L+ ED+
Sbjct: 1113 EANKYFAIDSAIALTVSFVINLAVVSVFAYHFFDHGCATAPGGPLACL-------SRTEEGVCD------CQLIGLAGAHDALAEALGKSAKYIWAVGLLAAGQASTMTGTYAGQYVMEGFLDLQIPLWARVTFTRFVAIGPGLVVAILTENNQNLSDRFQEAINVFNSVLLSFSLLPVLHFTSSSVIMGEHVSSLPLTITIWVLAFGVLAINIYLV---VLRIGAGQP--WWVYVVTAVVGLIYLAFSYSLVQEDIEN 1353
BLAST of mRNA_S-dermatodea_contig11701.1083.1 vs. uniprot
Match: W4FTC8_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FTC8_9STRA) HSP 1 Score: 201 bits (511), Expect = 1.410e-55 Identity = 117/270 (43.33%), Postives = 169/270 (62.59%), Query Frame = 1
Query: 1 QATKYYTIDSGIALLVAFLINLAVVCTFAKQFYDDSCATA----SVASACF---VGDSIDPSQPNYGVCDVDGT-GVCQEIGLSAAAAALKGTLGQSAKYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVLLTRVIALGPALAVTVFMGGDIRATDRMSAWLNVLQSLQLPFAIIPLLTFCNSQRIMGAFTISAPLTVFVWMVSVGVIGINIFIVGGFLVEQGDSKSGGEWLYAGAALGGFLYLGFILFLMWEDLRKLRSQ 786
QA KY+ I+ +AL V+FLINLAVVC FA+ F+ C + + +AC DS+ YG CD+ GT GVCQEIGLS A AL+G L ++ IWAVGLLAAGQSSTM GTYAGQFVMEGFL +++P W+R+ LTR +AL PAL+V ++ +D M+ +LNVLQS+QLPFA+IP+L F ++ +MG F + + W +++ V +NI++V V++ + GG Y F+ +L+ ++++L ++
Sbjct: 290 QANKYFAIEGAVALFVSFLINLAVVCVFAQSFFSLDCLPSFDIHGINTACLPLGASDSL-----IYGRCDLAGTPGVCQEIGLSGAGIALRGVLNSYSETIWAVGLLAAGQSSTMAGTYAGQFVMEGFLSIRLPPWKRMALTRAVALVPALSVAMWSESRPSESDSMNEFLNVLQSVQLPFALIPILHFTSNPVVMGTFANGRTMRLVGWAMTLVVCFVNIYLV----VDKVPLATLAPLAQTATVGGGLAYFAFLTYLVALEVKRLVAE 550
BLAST of mRNA_S-dermatodea_contig11701.1083.1 vs. uniprot
Match: A0A7S3YHG8_9EUKA (Hypothetical protein n=3 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YHG8_9EUKA) HSP 1 Score: 202 bits (513), Expect = 3.090e-55 Identity = 112/271 (41.33%), Postives = 166/271 (61.25%), Query Frame = 1
Query: 1 QATKYYTIDSGIALLVAFLINLAVVCTFAKQFYDDSCAT------ASVASACFV--GDSIDPSQ-PNYGVCDVDGTGVCQEIGLSAAAAALKGTLGQSAKYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVLLTRVIALGPALAVTVFMGGDIRATDRMSAWLNVLQSLQLPFAIIPLLTFCNSQRIMGAFTISAPLTVFVWMVSVGVIGINIFIVGGFLVEQGDSKSGGEWLYAGAALGGFLYLGFILFLMWEDLRKLRSQ 786
+A KY I+S IAL+V+F IN A+V TF + F++ C++ A + S + G+ DP+Q P+ G GVC EIGLS+A ALK LG +AKYIW GLLA+GQ+STMTGTYAGQFVM+GFLQ+++ W R ++TR +ALGPA+AV + D + WLN+LQS+QLPFA++P+L ++ IMG FT L + W ++GV +N+++V F + + +W A + +Y FI +++++ L+ R
Sbjct: 329 EAIKYNAIESAIALIVSFFINAAIVVTFQRGFFNRECSSNFDRNYACLDSRAGIPDGNVFDPTQTPSSCASRFGGHGVCAEIGLSSAGDALKQFLGDAAKYIWGFGLLASGQASTMTGTYAGQFVMQGFLQIQVAPWLRTMITRSVALGPAVAVALATAHSPDLGDELGEWLNILQSVQLPFALLPVLMLTSAPAIMGQFTNRLTLKIIGWTAAIGVFAVNVYLVVSFCFDATNPVPDADWFRAIVIVFLVIYFIFIAYVVYDGLKGTRKS 599
BLAST of mRNA_S-dermatodea_contig11701.1083.1 vs. uniprot
Match: H3GQQ0_PHYRM (Uncharacterized protein n=30 Tax=Phytophthora TaxID=4783 RepID=H3GQQ0_PHYRM) HSP 1 Score: 200 bits (509), Expect = 3.780e-55 Identity = 131/268 (48.88%), Postives = 162/268 (60.45%), Query Frame = 1
Query: 1 QATKYYTIDSGIALLVAFLINLAVVCTFAKQFYDDSCATA----SVASACFVGDSIDPSQPNYGVCDV--DGTGVCQEIGLSAAAAALKGTLGQSAKYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVLLTRVIALGPALAVTVFMGGDIRATDRMSAWLNVLQSLQLPFAIIPLLTFCNSQRIMGAFTISAPLTVFVWMVSVGVIGINIFIVGGFLVEQGDSKSGGEWLYAGA----ALGGF--LYLGFILFLMWEDL 768
+A KY+ I+SG AL V+FLINLAV+ FAK F+ C ++ V +AC G D YG C + G G+CQEIGLS A AL G LGQ A IWAVGLLAAGQSSTMTGTYAGQFVMEGFLQL I W+RV LTR ++L PA+ V + + +D M LNVLQS+QLPFA++P+L F +S IMG F S V WM+ V IN++++ L E L GA ALGG LY GF+ +L D+
Sbjct: 293 EANKYFAIESGFALFVSFLINLAVLAVFAKGFFSPDCTSSYDSTGVNTACVPGAIADGE--TYGHCQLASGGEGMCQEIGLSQAGVALSGMLGQYADIIWAVGLLAAGQSSTMTGTYAGQFVMEGFLQLHISPWKRVALTRCVSLVPAMTVAILSQQNPADSDHMDELLNVLQSIQLPFALLPVLIFTSSPAIMGDFANSKATVVAGWMLGGLVCVINLYLIFTNL----------EGLALGAVGLVALGGTCCLYFGFLGYLARADM 548
BLAST of mRNA_S-dermatodea_contig11701.1083.1 vs. uniprot
Match: A0A8K1CE46_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CE46_PYTOL) HSP 1 Score: 199 bits (506), Expect = 7.910e-55 Identity = 122/261 (46.74%), Postives = 160/261 (61.30%), Query Frame = 1
Query: 1 QATKYYTIDSGIALLVAFLINLAVVCTFAKQFYDDSCATA----SVASACFVGDSIDPSQPNYGVCDV--DGTGVCQEIGLSAAAAALKGTLGQSAKYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVLLTRVIALGPALAVTVFMGGDIRATDRMSAWLNVLQSLQLPFAIIPLLTFCNSQRIMGAFTISAPLTVFVWMVSVGVIGINIFIVGGFLVEQGDSKSGGEWLYAGAALGGFLYLGFILFLMWED 765
+A KY+ I+SG AL+V+FLINLAV+ FAK F+ C+ + V SAC G + D YG C + +G+CQ IGLS A +AL LG A+ IWAVGLLAAGQSSTMTGTYAGQFVMEGFL L++ W+RV TR +AL PAL V + + + +DRM LNVLQS+QLPFA++P+L F +S+RIMG F S W + V V +N+++V V D G + L G Y F+ +L+ D
Sbjct: 287 EANKYFAIESGGALIVSFLINLAVLAVFAKGFFSPDCSASFDQFGVNSACVPGGAADGD--TYGTCTLANGASGMCQSIGLSQAGSALSEMLGGYAEIIWAVGLLAAGQSSTMTGTYAGQFVMEGFLNLRLSPWKRVAFTRCVALVPALVVAILSEENPQDSDRMDEMLNVLQSIQLPFALLPVLVFTSSKRIMGDFANSVQSIALGWALGVVVCIVNLYLV---TVNLKDMDLG-PVSFGSILLVGCAYFWFLAYLVQSD 541
BLAST of mRNA_S-dermatodea_contig11701.1083.1 vs. uniprot
Match: A0A7S3YLW2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YLW2_HETAK) HSP 1 Score: 197 bits (500), Expect = 4.150e-54 Identity = 127/276 (46.01%), Postives = 164/276 (59.42%), Query Frame = 1
Query: 1 QATKYYTIDSGIALLVAFLINLAVVCTFAKQFYDDSCATASVASACFVG--DSIDPSQPNYGVC-DVDGTGVCQEIGLSAAAAALKGTLGQSAKYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLQLKIPKWQRVLLTRVIALGPALAVTVFMGGDIRATDRMSAWLNVLQSLQLPFAIIPLLTFCNSQRIMGAFTISAPLTVFVWMVSVGVI----GINIFIVGGFLVEQGDSKSGGEW-LYAGAALGGFLYLGFIL---FLMWEDLRKLRSQGCA 795
QA KY +DS I+L ++F+INLAV+ +FA FY +CA AS SAC D I+PSQ YG C + G G C E+GLS A L TLG +AK +WAVGLLA+GQSSTMTG YAGQFV EGFL++ IP+W VL+TR +AL PAL V V + +D + WLN+LQS+QLPFA+ PLL F S +IMG F +S +W G+I G+N++I L + ++ W L A A LYL I + +W K R A
Sbjct: 244 QALKYTYLDSAISLFISFVINLAVIGSFAYNFYSPTCARASTMSACVNHPLDGIEPSQL-YGDCTNTLGAGQCMEVGLSQAGDVLGRTLGATAKALWAVGLLASGQSSTMTGAYAGQFVFEGFLRIPIPRWLSVLVTRCVALVPALLVAVGSMSNPVLSDVLQQWLNILQSIQLPFALFPLLFFLASPKIMGQFAVSR----IMWWALAGIIATLLGMNLYITQTSLPDTSGLEADLTWGLSAALAALAALYLYVIAALTYFLWRGTGKGRHVAVA 514 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11701.1083.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11701.1083.1 >prot_S-dermatodea_contig11701.1083.1 ID=prot_S-dermatodea_contig11701.1083.1|Name=mRNA_S-dermatodea_contig11701.1083.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=274bp MTGTYAGQFVMEGFLQLKIPKWQRVLLTRVIALGPALAVTVFMGGDIRATback to top mRNA from alignment at S-dermatodea_contig11701:4869..6881- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11701.1083.1 ID=mRNA_S-dermatodea_contig11701.1083.1|Name=mRNA_S-dermatodea_contig11701.1083.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2013bp|location=Sequence derived from alignment at S-dermatodea_contig11701:4869..6881- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11701:4869..6881- >mRNA_S-dermatodea_contig11701.1083.1 ID=mRNA_S-dermatodea_contig11701.1083.1|Name=mRNA_S-dermatodea_contig11701.1083.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1644bp|location=Sequence derived from alignment at S-dermatodea_contig11701:4869..6881- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |