mRNA_S-dermatodea_contig11696.1077.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11696.1077.1 vs. uniprot
Match: D8LFZ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFZ6_ECTSI) HSP 1 Score: 256 bits (655), Expect = 9.490e-76 Identity = 122/192 (63.54%), Postives = 153/192 (79.69%), Query Frame = 1
Query: 4 VCYMVQKLAKRKGRRPCDIYLWIDYSCMNQQDPTVDRLALPYVLDGCETMIYIEDDEYWDQALSTTEHFIFHKLRRLRHSQRLKVGNDGNVFSLSEDGERLTKRSYSDTRSRFALNPAKGALTTETDRLYLWTLVLALEYEDTYDAQARCSGTEEQTGFMKLLRDAMFLNNCRGPKEAAAAIAEMDKASRAE 579
VCY+VQKLAKR GR+P + YLWIDY+C+NQQ+P+ DRLALP VLD C+ M+Y+EDDEYWDQALS TEHF+FHKLRRLR + +VFSLS DGE+L +R+Y++TR+RF NPAKG+LTTETDRLYLWTLVLALEYED Y A +++TGFMKLLR+A+F+N+C P++AAA IA+ D A+
Sbjct: 974 VCYLVQKLAKRLGRKPYEFYLWIDYACINQQNPSADRLALPCVLDSCDYMVYVEDDEYWDQALSRTEHFLFHKLRRLRPPANGASAYEEDVFSLSADGEKLMQRTYAETRARFTHNPAKGSLTTETDRLYLWTLVLALEYEDCYSFTANLP-PQDETGFMKLLREAVFVNSCMDPRQAAAEIADRDAQMHAD 1164
BLAST of mRNA_S-dermatodea_contig11696.1077.1 vs. uniprot
Match: A0A836BZ60_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BZ60_9CHLO) HSP 1 Score: 76.6 bits (187), Expect = 7.450e-13 Identity = 43/143 (30.07%), Postives = 69/143 (48.25%), Query Frame = 1
Query: 1 QVCYMVQKLAKRKGRRPCDIYLWIDYSCMNQQDPTVDRLALPYVLDGCETMIYIEDDEYWDQALSTTEHFIFHKLRRLRHSQRLKVGNDGNVFSLSEDGERLTKRSYSDTRSRFALNPAKGALTTETDRLYLWTLVLALEYED 429
QV + + +AK +G RP +Y+W+DYS ++Q +P ALP + C+ +Y+ EYW +A TE F+ KL +L G DG R +++ + +P G L E DR+ L T+ L Y++
Sbjct: 628 QVYAIAEHIAKHRGVRPEQVYMWLDYSVVDQSNPMPGVQALPIYIACCDEFVYVTHSEYWQRAWCLTEQFMHWKLATSDVKHKLIPGPDGGG----------NMRMETESSRQRPPDPTYGKLFVEADRVALATMTSLLSYDE 760
BLAST of mRNA_S-dermatodea_contig11696.1077.1 vs. uniprot
Match: A0A150GZK6_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GZK6_GONPE) HSP 1 Score: 72.4 bits (176), Expect = 2.220e-11 Identity = 42/143 (29.37%), Postives = 65/143 (45.45%), Query Frame = 1
Query: 1 QVCYMVQKLAKRKGRRPCDIYLWIDYSCMNQQDPTVDRLALPYVLDGCETMIYIEDDEYWDQALSTTEHFIFHKLRRLRHSQRLKVGNDGNVFSLSEDGERLTKRSYSDTRSRFALNPAKGALTTETDRLYLWTLVLALEYED 429
Q+ +V +A + P +YLW+DYS +NQ DP ALP + C+ +Y+E EYW +A TE F+ KL L LT+ +++ + +P G L E DR+ L T+ + Y+D
Sbjct: 775 QIFQIVDYIADLRKVDPSLVYLWLDYSVVNQNDPMPGAQALPVYIACCDEFVYVEHAEYWQRAWCLTEQFMHWKLASSESKHALSP---------------LTETIRAESARQRPPDPTYGKLAVEADRVALATMTSIMPYDD 902
BLAST of mRNA_S-dermatodea_contig11696.1077.1 vs. uniprot
Match: A0A8J4GFZ7_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GFZ7_9CHLO) HSP 1 Score: 68.2 bits (165), Expect = 4.900e-10 Identity = 44/142 (30.99%), Postives = 65/142 (45.77%), Query Frame = 1
Query: 1 QVCYMVQKLAKRKGRRPCDIYLWIDYSCMNQQDPTVDRLALPYVLDGCETMIYIEDDEYWDQALSTTEHFIFHKLRRLRHSQRLKVGNDGNVFSLSEDGERLTKRSYSDTRSRFALNPAKGALTTETDRLYLWTLVLALEYE 426
QV + ++K +G +++LW+DYS ++Q +P ALP + CE +YI+ DEYW +A TE F+ KL S R V N + E+ +P G L E DR+ L T+ L YE
Sbjct: 274 QVMAIAAHMSKCRGVPEKEVFLWLDYSVIDQDNPMPGVQALPIYIACCEEFVYIQHDEYWQRAWCLTEQFMHWKLAT---SGRKHVLNPHTLDLALENARERPP------------DPTYGKLAMEADRVALATMTSILPYE 400
BLAST of mRNA_S-dermatodea_contig11696.1077.1 vs. uniprot
Match: A0A2K3E7K8_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3E7K8_CHLRE) HSP 1 Score: 65.5 bits (158), Expect = 5.050e-9 Identity = 42/142 (29.58%), Postives = 66/142 (46.48%), Query Frame = 1
Query: 1 QVCYMVQKLAKRKGRRPCD-IYLWIDYSCMNQQDPTVDRLALPYVLDGCETMIYIEDDEYWDQALSTTEHFIFHKLRRLRHSQRLKVGNDGNVFSLSEDGERLTKRSYSDTRSRFALNPAKGALTTETDRLYLWTLVLALEY 423
QV + +AK + R P D +YLW+DYS ++Q +P ALP + C+ +Y+ DEYW++A TE F+ KL RL D + + + R+ +P G L E DR+ L ++ + Y
Sbjct: 537 QVYAIADHVAKHR-RVPADKVYLWLDYSVVDQDNPMPGVQALPVYIACCDEFVYVHHDEYWERAWCLTEQFMHWKLGTGESKHRL----DPTGLAFTTESSRVQPP-----------DPTYGKLAVEADRIALASMTSIMPY 662
BLAST of mRNA_S-dermatodea_contig11696.1077.1 vs. uniprot
Match: A0A150GZ70_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GZ70_GONPE) HSP 1 Score: 63.9 bits (154), Expect = 1.720e-8 Identity = 40/143 (27.97%), Postives = 65/143 (45.45%), Query Frame = 1
Query: 1 QVCYMVQKLAKRKGRRPCDIYLWIDYSCMNQQDPTVDRLALPYVLDGCETMIYIEDDEYWDQALSTTEHFIFHKLRRLRHSQRLKVGNDGNVFSLSEDGERLTKRSYSDTRSRFALNPAKGALTTETDRLYLWTLVLALEYED 429
QV + +A +G +YLW+DYS ++Q +P ALP + C+ +Y+E +EYW +A TE F+ KL L LT+ +++ + +P G L E DR+ L T+ + Y+D
Sbjct: 567 QVFLIADYVAGLRGVPLSAVYLWLDYSVVDQSNPMPG--ALPIYIACCDEFVYVEHEEYWQRAWCLTEQFMHWKLASSESKHALSP---------------LTETIRAESARQRPPDPTYGKLAVEADRVALATMTSIMPYDD 692
BLAST of mRNA_S-dermatodea_contig11696.1077.1 vs. uniprot
Match: A0A835SGQ6_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SGQ6_CHLIN) HSP 1 Score: 63.5 bits (153), Expect = 2.280e-8 Identity = 41/149 (27.52%), Postives = 66/149 (44.30%), Query Frame = 1
Query: 1 QVCYMVQKLAKRKGRRPCDIYLWIDYSCMNQQDPTVDRLALPYVLDGCETMIYIEDDEYWDQALSTTEHFIFHKLRRLRHSQRLKVGNDGNVFSLSEDGERLTKRSYSDTRSRFALNPAKGALTTETDRLYLWTLVLALEY----EDTY 435
QV + +A+ + +YLW+DYS ++Q +P ALP + C+ +Y+ DEYW++A TE F+ KL RL D + + + R +P G L E DR+ L ++ + Y +DTY
Sbjct: 501 QVFAIADHVARHRRVSVDKVYLWLDYSVVDQDNPMPGVQALPVYIACCDEFVYVYHDEYWERAWCLTEQFMHWKLGTGESKHRL----DPASLAFATESSRAQPP-----------DPTYGKLAVEADRIALASMTSIMPYTLPGDDTY 634
BLAST of mRNA_S-dermatodea_contig11696.1077.1 vs. uniprot
Match: A0A836B608_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836B608_9CHLO) HSP 1 Score: 61.2 bits (147), Expect = 1.440e-7 Identity = 38/141 (26.95%), Postives = 62/141 (43.97%), Query Frame = 1
Query: 1 QVCYMVQKLAKRKGRRPCDIYLWIDYSCMNQQDPTVDRLALPYVLDGCETMIYIEDDEYWDQALSTTEHFIFHKLRRLRHSQRLKVGNDGNVFSLSEDGERLTKRSYSDTRSRFALNPAKGALTTETDRLYLWTLVLALEY 423
QV + +A+ + +YLW+DYS ++Q +P ALP + C+ +Y+ +EYW++A TE F+ KL RL D +L+ + R +P G L E DR+ L + + Y
Sbjct: 559 QVYKIADHVARHRQVPVEQVYLWLDYSVVDQDNPMPGVQALPVYIACCDEFVYVYHEEYWERAWCLTEQFMHWKLGTGESKHRL----DPASLALTSESRRTQPP-----------DPTYGKLAAEADRIALAAMTSIMPY 684
BLAST of mRNA_S-dermatodea_contig11696.1077.1 vs. uniprot
Match: A0A2J8A851_9CHLO (Uncharacterized protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A851_9CHLO) HSP 1 Score: 60.5 bits (145), Expect = 2.360e-7 Identity = 41/140 (29.29%), Postives = 67/140 (47.86%), Query Frame = 1
Query: 10 YMVQKLAKRKGRRPCD-IYLWIDYSCMNQQDPTVDRLALPYVLDGCETMIYIEDDEYWDQALSTTEHFIFHKLRRLRHSQRLKVGNDGNVFSLSEDGERLTKRSYSDTRSRFALNPAKGALTTETDRLYLWTLVLALEYE 426
Y + + R P D +YLW+DYS ++Q +P ALP + C+ +Y++ ++YW +A TE F+ KL G+V + D + LT S R +P+ G L E+DR+ L T+ + Y+
Sbjct: 339 YAIAQYVADFRRVPLDKVYLWLDYSVVDQSNPMPGVQALPIYIACCDEFVYVKHEQYWQRAWCLTEQFMDWKLA------------GGDVKHVL-DPDTLTASVESRVRPP---DPSFGKLAVESDRIALATITSIMPYD 462
BLAST of mRNA_S-dermatodea_contig11696.1077.1 vs. uniprot
Match: A0A8K0T8S8_9PEZI (Uncharacterized protein n=1 Tax=Plectosphaerella cucumerina TaxID=40658 RepID=A0A8K0T8S8_9PEZI) HSP 1 Score: 56.6 bits (135), Expect = 5.700e-6 Identity = 25/59 (42.37%), Postives = 37/59 (62.71%), Query Frame = 1
Query: 55 DIYLWIDYSCMNQQDPTVDRLALPYVLDGCETMIYIEDDEYWDQALSTTEHFIFHKLRR 231
D+ LWIDY+C++QQ+P + LP +L C MI + DD+Y+D+A E + LRR
Sbjct: 791 DVALWIDYTCIDQQNPMPGIMGLPIILVQCNAMISLVDDDYYDRAWCCVEVQLVSTLRR 849 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11696.1077.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11696.1077.1 >prot_S-dermatodea_contig11696.1077.1 ID=prot_S-dermatodea_contig11696.1077.1|Name=mRNA_S-dermatodea_contig11696.1077.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=192bp MVQKLAKRKGRRPCDIYLWIDYSCMNQQDPTVDRLALPYVLDGCETMIYIback to top mRNA from alignment at S-dermatodea_contig11696:512..2982+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11696.1077.1 ID=mRNA_S-dermatodea_contig11696.1077.1|Name=mRNA_S-dermatodea_contig11696.1077.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2471bp|location=Sequence derived from alignment at S-dermatodea_contig11696:512..2982+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11696:512..2982+ >mRNA_S-dermatodea_contig11696.1077.1 ID=mRNA_S-dermatodea_contig11696.1077.1|Name=mRNA_S-dermatodea_contig11696.1077.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1152bp|location=Sequence derived from alignment at S-dermatodea_contig11696:512..2982+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |