mRNA_S-dermatodea_contig11673.1067.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11673.1067.1 vs. uniprot
Match: D8LGK7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK7_ECTSI) HSP 1 Score: 171 bits (434), Expect = 4.540e-52 Identity = 77/89 (86.52%), Postives = 83/89 (93.26%), Query Frame = 1
Query: 1 WFNIGAACFSINVVILGYLTVWLPHIRGIKVSWNVYSPRAIPTATVVGLICALTLNMALWSVWGFLTPLILFSVFIGILFSLHFVPWPC 267
WFNIG CFS+N VIL YLTVWLPH+RGI+VSWNVYSPRAIPTATVVGLICAL LNM+LW+VWGFLTPLILF+VFIG LFSLHFVPWPC
Sbjct: 151 WFNIGLVCFSVNAVILAYLTVWLPHVRGIRVSWNVYSPRAIPTATVVGLICALALNMSLWNVWGFLTPLILFAVFIGCLFSLHFVPWPC 239
BLAST of mRNA_S-dermatodea_contig11673.1067.1 vs. uniprot
Match: A0A836CLB2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLB2_9STRA) HSP 1 Score: 140 bits (354), Expect = 5.840e-41 Identity = 59/89 (66.29%), Postives = 73/89 (82.02%), Query Frame = 1
Query: 1 WFNIGAACFSINVVILGYLTVWLPHIRGIKVSWNVYSPRAIPTATVVGLICALTLNMALWSVWGFLTPLILFSVFIGILFSLHFVPWPC 267
WFN+ ACF++N VI+GYLT+WLP ++ + WN+Y PRAIP AT VG+IC ++LN+ALWSVWGFLTPLIL VF+G LF LHFVPWPC
Sbjct: 71 WFNLATACFAVNCVIMGYLTLWLPLVQRVSTPWNIYCPRAIPAATAVGVICGVSLNLALWSVWGFLTPLILLVVFMGCLFFLHFVPWPC 159
BLAST of mRNA_S-dermatodea_contig11673.1067.1 vs. uniprot
Match: A0A6G0XCK9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCK9_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.000e-29 Identity = 51/86 (59.30%), Postives = 63/86 (73.26%), Query Frame = 1
Query: 1 WFNIGAACFSINVVILGYLTVWLPHIRGIKVSWNVYSPRAIPTATVVGLICALTLNMALWSVWGFLTPLILFSVFIGILFSLHFVP 258
+FNIG CF IN I YL VWLP+++ I + W+VY PR IPTATVVGL+CAL L + LW VWGF TP ILF +F+G L + HF+P
Sbjct: 85 YFNIGLVCFGINCCITMYLAVWLPYVKKIDLEWSVYCPRMIPTATVVGLLCALMLTIGLWPVWGFFTPGILFVLFLGALMTAHFLP 170
BLAST of mRNA_S-dermatodea_contig11673.1067.1 vs. uniprot
Match: A0A024UNE8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UNE8_9STRA) HSP 1 Score: 112 bits (279), Expect = 2.310e-29 Identity = 47/86 (54.65%), Postives = 62/86 (72.09%), Query Frame = 1
Query: 1 WFNIGAACFSINVVILGYLTVWLPHIRGIKVSWNVYSPRAIPTATVVGLICALTLNMALWSVWGFLTPLILFSVFIGILFSLHFVP 258
+FN+G CF IN I YL +WLP+++ I + WNVY PR +PTAT+VG++CAL M LW VWGF TP ILF +F+G L + HF+P
Sbjct: 90 YFNLGLVCFGINTCITLYLAIWLPYVKKIDLEWNVYCPRMVPTATIVGVVCALMFTMGLWPVWGFFTPGILFVLFLGALMTAHFLP 175
BLAST of mRNA_S-dermatodea_contig11673.1067.1 vs. uniprot
Match: W4FWN3_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWN3_9STRA) HSP 1 Score: 110 bits (275), Expect = 9.790e-29 Identity = 47/86 (54.65%), Postives = 63/86 (73.26%), Query Frame = 1
Query: 1 WFNIGAACFSINVVILGYLTVWLPHIRGIKVSWNVYSPRAIPTATVVGLICALTLNMALWSVWGFLTPLILFSVFIGILFSLHFVP 258
+FNIG CF IN I YL++WLP+++ I + W+VY PR +PTATVVG++CAL + LW VWGF TP ILF +F+G L + HF+P
Sbjct: 92 YFNIGLVCFGINACITLYLSIWLPYVKKIDLEWSVYCPRMVPTATVVGIVCALMFTVGLWPVWGFFTPGILFVLFLGTLMTAHFLP 177
BLAST of mRNA_S-dermatodea_contig11673.1067.1 vs. uniprot
Match: A0A485KKF8_9STRA (Aste57867_8441 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KKF8_9STRA) HSP 1 Score: 108 bits (271), Expect = 3.730e-28 Identity = 49/86 (56.98%), Postives = 61/86 (70.93%), Query Frame = 1
Query: 1 WFNIGAACFSINVVILGYLTVWLPHIRGIKVSWNVYSPRAIPTATVVGLICALTLNMALWSVWGFLTPLILFSVFIGILFSLHFVP 258
+FNIG CF IN I YL VWLP+I+ I + W+VY PR +PTAT VGL+CALT + LW VWG TP ILF +F+G L + HF+P
Sbjct: 90 YFNIGLVCFGINCCITLYLAVWLPYIKKIDLEWSVYCPRMVPTATAVGLLCALTFTIGLWPVWGLFTPGILFVLFLGSLMTAHFLP 175
BLAST of mRNA_S-dermatodea_contig11673.1067.1 vs. uniprot
Match: A0A1W0A176_9STRA (Transmembrane protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A176_9STRA) HSP 1 Score: 106 bits (265), Expect = 2.190e-27 Identity = 46/86 (53.49%), Postives = 62/86 (72.09%), Query Frame = 1
Query: 1 WFNIGAACFSINVVILGYLTVWLPHIRGIKVSWNVYSPRAIPTATVVGLICALTLNMALWSVWGFLTPLILFSVFIGILFSLHFVP 258
+FNIG CF +N I YL VWLP+++ I + W+VY PR IPTAT++G++CAL + LW VWGF TP ILF +F+G L + HF+P
Sbjct: 78 YFNIGLVCFGMNCCITLYLAVWLPYVKKIDLEWSVYCPRMIPTATIIGILCALGFILGLWPVWGFFTPGILFVLFLGSLMTAHFLP 163
BLAST of mRNA_S-dermatodea_contig11673.1067.1 vs. uniprot
Match: B5Y508_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y508_PHATC) HSP 1 Score: 96.3 bits (238), Expect = 3.300e-23 Identity = 47/87 (54.02%), Postives = 58/87 (66.67%), Query Frame = 1
Query: 7 NIGAACFSINVVILGYLTVWLPHIRGIKVS--WNVYSPRAIPTATVVGLICALTLNMALWSVWGFLTPLILFSVFIGILFSLHFVPW 261
+ A F IN V+L YLTV+LP I+G+ S W VY PR +PT T VG++ L L A W VWGFL PL+L F+G+LF LHFVPW
Sbjct: 86 QVAALSFGINTVLLLYLTVYLPKIKGLTDSSAWEVYCPRVVPTMTFVGVVTGLLLIRATWPVWGFLAPLVLGVEFLGLLFGLHFVPW 172
BLAST of mRNA_S-dermatodea_contig11673.1067.1 vs. uniprot
Match: A0A2D4BMR8_PYTIN (Transmembrane protein putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMR8_PYTIN) HSP 1 Score: 90.9 bits (224), Expect = 9.380e-21 Identity = 42/86 (48.84%), Postives = 55/86 (63.95%), Query Frame = 1
Query: 1 WFNIGAACFSINVVILGYLTVWLPHIRGIKVSWNVYSPRAIPTATVVGLICALTLNMALWSVWGFLTPLILFSVFIGILFSLHFVP 258
+F++G C IN I YL ++LP+I+ I + WNVY PR IPTATVVG+I A A W +WG TP +L FIG L + HF+P
Sbjct: 122 FFHVGLMCVGINTCITCYLAIYLPYIKRIHLEWNVYCPRMIPTATVVGVIAAFCFICAFWPIWGLFTPGLLLLFFIGSLMTAHFLP 207
BLAST of mRNA_S-dermatodea_contig11673.1067.1 vs. uniprot
Match: J9J388_9SPIT (Transmembrane protein putative n=2 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9J388_9SPIT) HSP 1 Score: 74.7 bits (182), Expect = 1.890e-14 Identity = 32/86 (37.21%), Postives = 56/86 (65.12%), Query Frame = 1
Query: 1 WFNIGAACFSINVVILGYLTVWLPHIRGIKVSWNVYSPRAIPTATVVGLICALTLNMALWSVWGFLTPLILFSVFIGILFSLHFVP 258
+F++ IN+ + Y+TV+LP+I+ I + Y P+ IP TV+G++ +L +ALW +WG+LTP+++F +F+G L F+P
Sbjct: 100 FFDLAMIGIGINIAFMLYMTVYLPYIKRINEDFETYCPQLIPVVTVIGIVSFFSLLIALWPIWGWLTPIMMFILFMGYTMLLMFLP 185 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11673.1067.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11673.1067.1 >prot_S-dermatodea_contig11673.1067.1 ID=prot_S-dermatodea_contig11673.1067.1|Name=mRNA_S-dermatodea_contig11673.1067.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=90bp WFNIGAACFSINVVILGYLTVWLPHIRGIKVSWNVYSPRAIPTATVVGLIback to top mRNA from alignment at S-dermatodea_contig11673:63..1351+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11673.1067.1 ID=mRNA_S-dermatodea_contig11673.1067.1|Name=mRNA_S-dermatodea_contig11673.1067.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1289bp|location=Sequence derived from alignment at S-dermatodea_contig11673:63..1351+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11673:63..1351+ >mRNA_S-dermatodea_contig11673.1067.1 ID=mRNA_S-dermatodea_contig11673.1067.1|Name=mRNA_S-dermatodea_contig11673.1067.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=540bp|location=Sequence derived from alignment at S-dermatodea_contig11673:63..1351+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |