|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 842 |
| Cds size | 573 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622924212.9055161-CDS-S-dermatodea_contig11655:1908..2481 | 1622924212.9055161-CDS-S-dermatodea_contig11655:1908..2481 | Saccorhiza dermatodea SderLu1190fm monoicous | CDS | S-dermatodea_contig11655 1909..2481 + |
| 1694079097.147301-CDS-S-dermatodea_contig11655:1908..2481 | 1694079097.147301-CDS-S-dermatodea_contig11655:1908..2481 | Saccorhiza dermatodea SderLu1190fm monoicous | CDS | S-dermatodea_contig11655 1909..2481 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11655.1058.1 >prot_S-dermatodea_contig11655.1058.1 ID=prot_S-dermatodea_contig11655.1058.1|Name=mRNA_S-dermatodea_contig11655.1058.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=191bp
MKRTCSTVRQFSAPRPGDRARIDGLARGRDVCLLGRTCGGKRILMGSHRR
HAPVYFVGSTLKLPQRAALEHRLRADEEVTQRGYSTRNRRVFVVTAPRCC
QFARPRRGLGTGNVASATCVHQSPPQELREPAPRQLHGDHSLAGVNQEPR
QPTALRRVRHRKRSYESDHRARRRKVLPMPTPLRLGQHCV* back to topmRNA from alignment at S-dermatodea_contig11655:1676..2517+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig11655.1058.1 ID=mRNA_S-dermatodea_contig11655.1058.1|Name=mRNA_S-dermatodea_contig11655.1058.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=842bp|location=Sequence derived from alignment at S-dermatodea_contig11655:1676..2517+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GTACCTCCAACTTTCCCCAGGTCTCCAATAGCTTTACACCCACCTCCAGC
GGGTACCGGGTCCGTTGCTGGCGTTGCTTCTTCCGTCGTCGTAGGGGTGC
CTTCTGCGGAGCGCTGCGGTCGACACTGGTTCGCAACTCGAAACACAGCG
GCCACGAGAGCGTCGATCGTTCCGTCCAGCGAAGACGACAGCAGGCCGCA
GAGGAGCGGCGGACTGGCAGTGTCGTTAGAGGGATGAAACGCACGTGCTC
CACCGTGCGCCAATTCTCCGCCCCCCGCCCCGGGGATCGCGCCAGAATCG
ATGGCCTCGCCCGAGGTCGGGACGTGTGCTTGCTCGGCAGGACATGCGGC
GGCAAGCGCATTCTGATGGGGAGCCACCGCCGCCACGCCCCGGTTTATTT
CGTCGGCAGCACACTCAAGCTTCCGCAGCGCGCTGCACTCGAGCACCGCC
TTCGCGCGGACGAGGAGGTCACCCAAAGGGGATACTCTACTCGTAACCGC
CGGGTCTTCGTCGTCACCGCCCCCCGCTGCTGTCAATTCGCTCGGCCCCG
CCGCGGTCTTGGAACAGGCAACGTTGCATCGGCAACCTGTGTACACCAGA
GCCCCCCGCAAGAGCTGCGCGAGCCCGCCCCTCGGCAGTTGCATGGCGAC
CACTCGCTCGCCGGTGTCAACCAGGAGCCACGGCAGCCCACCGCCCTCAG
GAGAGTCCGGCATCGCAAACGAAGCTACGAATCCGATCACCGAGCTCGTC
GACGGAAAGTCCTCCCGATGCCGACCCCGCTCCGCCTGGGGCAACACTGT
GTGTGAGGAATCGTTTTTCCCACTTCCACCAATGCCGCCGCC back to topCoding sequence (CDS) from alignment at S-dermatodea_contig11655:1676..2517+ >mRNA_S-dermatodea_contig11655.1058.1 ID=mRNA_S-dermatodea_contig11655.1058.1|Name=mRNA_S-dermatodea_contig11655.1058.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1146bp|location=Sequence derived from alignment at S-dermatodea_contig11655:1676..2517+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAAACGCACGTGCTCCACCGTGCGCCAATTCTCCGCCCCCCGCCCCGG
GGATCGCGCCAGAATCGATGGCCTCGCCCGAGGTCGGGACGTGTGCTTGC
TCGGCAGGACATGCGGCGGCAAGCGCATTCTGATGGGGAGCCACCGCCGC
CACGCCCCGGTTTATTTCGTCGGCAGCACACTCAAGCTTCCGCAGCGCGC
TGCACTCGAGCACCGCCTTCGCGCGGACGAGGAGGTCACCCAAAGGGGAT
ACTCTACTCGTAACCGCCGGGTCTTCGTCGTCACCGCCCCCCGCTGCTGT
CAATTCGCTCGGCCCCGCCGCGGTCTTGGAACAGGCAACGTTGCATCGGC
AACCTGTGTACACCAGAGCCCCCCGCAAGAGCTGCGCGAGCCCGCCCCTC
GGCAGTTGCATGGCGACCACTCGCTCGCCGGTGTCAACCAGGAGCCACGG
CAGCCCACCGCCCTCAGGAGAGTCCGGCATCGCAAACGAAGCTACGAATC
CGATCACCGAGCTCGTCGACGGAAAGTCCTCCCGATGCCGACCCCGCTCC
GCCTGGGGCAACACTGTGTGTGAATGAAACGCACGTGCTCCACCGTGCGC
CAATTCTCCGCCCCCCGCCCCGGGGATCGCGCCAGAATCGATGGCCTCGC
CCGAGGTCGGGACGTGTGCTTGCTCGGCAGGACATGCGGCGGCAAGCGCA
TTCTGATGGGGAGCCACCGCCGCCACGCCCCGGTTTATTTCGTCGGCAGC
ACACTCAAGCTTCCGCAGCGCGCTGCACTCGAGCACCGCCTTCGCGCGGA
CGAGGAGGTCACCCAAAGGGGATACTCTACTCGTAACCGCCGGGTCTTCG
TCGTCACCGCCCCCCGCTGCTGTCAATTCGCTCGGCCCCGCCGCGGTCTT
GGAACAGGCAACGTTGCATCGGCAACCTGTGTACACCAGAGCCCCCCGCA
AGAGCTGCGCGAGCCCGCCCCTCGGCAGTTGCATGGCGACCACTCGCTCG
CCGGTGTCAACCAGGAGCCACGGCAGCCCACCGCCCTCAGGAGAGTCCGG
CATCGCAAACGAAGCTACGAATCCGATCACCGAGCTCGTCGACGGAAAGT
CCTCCCGATGCCGACCCCGCTCCGCCTGGGGCAACACTGTGTGTGA back to top
|