mRNA_S-dermatodea_contig11568.1000.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11568.1000.1 vs. uniprot
Match: A0A1R1S7L8_9ACTN (Esterase n=1 Tax=Streptomyces sparsogenes DSM 40356 TaxID=1331668 RepID=A0A1R1S7L8_9ACTN) HSP 1 Score: 95.5 bits (236), Expect = 5.070e-21 Identity = 55/117 (47.01%), Postives = 68/117 (58.12%), Query Frame = 1
Query: 1 PQDTPRGSGVAGPFPCLLNHHGGGFAVWSPDVPFYDGFSVRLCARERVVVVSVDYRLSSEEPFPAGLNDCMSALEWACVGGDGALDTTAPGEGVILFGDSCGSNFVLALTLMAKRRG 351
P T R G AGP P + + HGGGF V SPDV F++ LC R VVVS DYRL+ E PFPAGL DC + L GD LD A + + + GDS G+ ALT++A+ RG
Sbjct: 2 PLRTYRPEGAAGPLPAVYSLHGGGFVVGSPDVDH--AFNLWLCRRLDAVVVSPDYRLAPEHPFPAGLEDCYAGL-CLLAEGDAGLDVAA--DRIAVLGDSSGAGMATALTMLARDRG 113
BLAST of mRNA_S-dermatodea_contig11568.1000.1 vs. uniprot
Match: UPI000826E49A (alpha/beta hydrolase n=2 Tax=Streptomyces sparsogenes TaxID=67365 RepID=UPI000826E49A) HSP 1 Score: 95.5 bits (236), Expect = 1.460e-20 Identity = 55/117 (47.01%), Postives = 68/117 (58.12%), Query Frame = 1
Query: 1 PQDTPRGSGVAGPFPCLLNHHGGGFAVWSPDVPFYDGFSVRLCARERVVVVSVDYRLSSEEPFPAGLNDCMSALEWACVGGDGALDTTAPGEGVILFGDSCGSNFVLALTLMAKRRG 351
P T R G AGP P + + HGGGF V SPDV F++ LC R VVVS DYRL+ E PFPAGL DC + L GD LD A + + + GDS G+ ALT++A+ RG
Sbjct: 66 PLRTYRPEGAAGPLPAVYSLHGGGFVVGSPDVDH--AFNLWLCRRLDAVVVSPDYRLAPEHPFPAGLEDCYAGL-CLLAEGDAGLDVAA--DRIAVLGDSSGAGMATALTMLARDRG 177
BLAST of mRNA_S-dermatodea_contig11568.1000.1 vs. uniprot
Match: A0A7S3ZD40_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZD40_9EUKA) HSP 1 Score: 95.9 bits (237), Expect = 1.620e-20 Identity = 61/151 (40.40%), Postives = 81/151 (53.64%), Query Frame = 1
Query: 10 TPRGSGVAGPFPCLLNHHGGGFAVWSPDVPFYDGFSVRLCARERVVVVSVDYRLSSEEPFPAGLNDCMSALEWACVGGDGALDTTAPGEGVILFGDSCGSNFVLALTLMAKRRGMLSAVKGVFAVSPFIAGEQCYPCDKLPSTVRSLTGQG 462
TP ++G ++ HGGGF +++ P Y + +C R + VV D+R S E PFPA L+DC SAL WA D P V+LFGDS G + A L AKRRG LSA+KGV+A+ I G C+P ++ PS G G
Sbjct: 105 TPSSGDISG---TVVFFHGGGFCMYTKASPVYVRAAKEIC-RVGLRVVVPDFRSSYEHPFPAQLHDCYSALLWAA-------DKFGP---VVLFGDSAGGTLICAAALFAKRRGELSAIKGVWALDAAIYG--CFPDERFPSIQYYEGGYG 239
BLAST of mRNA_S-dermatodea_contig11568.1000.1 vs. uniprot
Match: A0A1Q7T7M5_9CHLR (Abhydrolase_3 domain-containing protein n=2 Tax=unclassified Chloroflexi TaxID=189774 RepID=A0A1Q7T7M5_9CHLR) HSP 1 Score: 93.6 bits (231), Expect = 1.580e-19 Identity = 60/135 (44.44%), Postives = 78/135 (57.78%), Query Frame = 1
Query: 16 RGSGVAGPFPCLLNHHGGGFAVWSPDVPFYDGFSVRLCARERVVVVSVDYR--LSSE--EPFPAGLNDCMSALEWACVGGD--GALDTTAPGEGVILFGDSCGSNFVLALTLMAKRRGMLSAVKGVFAVSPFIAG 402
R + V GP PC + HGGG + + + L A +VV+ VD+R S+E PFPAGLNDC SALEW D G LD T+ V+L G+S G+N VLA L AKR G L A+ GV+A+ P+I+G
Sbjct: 112 RSANVTGPLPCTVYIHGGGMTILDAFAKVHQRWCEDLAATG-MVVIGVDFRNAYSAEGMHPFPAGLNDCTSALEWV---NDHRGQLDITS----VVLQGESGGANLVLATALKAKRDGHLDAINGVYAMVPYISG 238
BLAST of mRNA_S-dermatodea_contig11568.1000.1 vs. uniprot
Match: A0A365YR75_9ACTN (Esterase n=2 Tax=Streptomyces TaxID=1883 RepID=A0A365YR75_9ACTN) HSP 1 Score: 92.0 bits (227), Expect = 3.310e-19 Identity = 54/117 (46.15%), Postives = 65/117 (55.56%), Query Frame = 1
Query: 16 RGSGVAGPFPCLLNHHGGGFAVWSPDVPFYDGFSVRLCARERVVVVSVDYRLSSEEPFPAGLNDCMSALEWACVGGDGALDTTAPGEGVI-----LFGDSCGSNFVLALTLMAKRRG 351
R + GP P LL+ HGGGF + SPDV +VRLC VVVSVDYRL+ E PFPA L+DC +AL W L AP GV L+GDS G+ L L+A+ RG
Sbjct: 69 RPADARGPLPALLSMHGGGFVLGSPDVDHES--NVRLCRELPAVVVSVDYRLAPEHPFPAALDDCWTALRW--------LADNAPALGVAPDRIGLWGDSAGAGLAAGLALLARDRG 175
BLAST of mRNA_S-dermatodea_contig11568.1000.1 vs. uniprot
Match: K3ZIU4_SETIT (Abhydrolase_3 domain-containing protein n=2 Tax=Setaria TaxID=4554 RepID=K3ZIU4_SETIT) HSP 1 Score: 92.0 bits (227), Expect = 5.670e-19 Identity = 60/152 (39.47%), Postives = 78/152 (51.32%), Query Frame = 1
Query: 43 PCLLNHHGGGFAVWSPDVPFYDGFSVRLCARERVVVVSVDYRLSSEEPFPAGLNDCMSALEWACVGGDGALDTTAPGE--GVILFGDSCGSNFVLALTLMAKRRGMLSAVKGVFAVSPFIAGEQCYPCD-KLPSTVRSLTGQGWAPTYPSVA 489
P L+ HGG F S P Y F L AR ++VVSV+YRL+ E PFPAG D + ALEWA GG G + G+ V L G+S G N + +MA +AV+G + +G + P D +LP V SL G+ WA P A
Sbjct: 138 PLLVYFHGGAFVTQSAAAPAYQPFLSTLAARAGLLVVSVNYRLAPEHPFPAGYEDSLRALEWAVAGGGGDPWLSRHGDLGRVFLAGESAGGNIAHNVAMMAAAGEAAAAVEGAAVLHALFSGRE--PVDGELPMWVESL-GKLWAVVCPEAA 286
BLAST of mRNA_S-dermatodea_contig11568.1000.1 vs. uniprot
Match: A0A0L8KU95_STRVR (Abhydrolase_3 domain-containing protein n=2 Tax=Streptomyces TaxID=1883 RepID=A0A0L8KU95_STRVR) HSP 1 Score: 90.5 bits (223), Expect = 1.840e-18 Identity = 59/152 (38.82%), Postives = 84/152 (55.26%), Query Frame = 1
Query: 16 RGSGVAGPFPCLLNHHGGGFAVWSPDVPFYDGFSVRLCARERVVVVSVDYRLSSEE----PFPAGLNDCMSALEWACVGGDGALDTTAPGEGVILFGDSCGSNFVLALTLMAKRRGMLSAVKGVFAVSPFIAGEQCYPCD----KLPSTVRS 447
R S V+GP P ++ HGGG A+ S P Y + L A V+VV V++R ++ + PFPAGL+DC SALEW GA V + GDS G+N LA+T+ AKR G L + G +A++P+I+G + +LPS V +
Sbjct: 111 RPSDVSGPLPAVVFLHGGGMALLSAAGPLYLRWYDELAATG-VIVVGVEFRNAAGKLGPHPFPAGLDDCFSALEWV-----GAHREDLGVTRVAVAGDSGGANLALAVTIKAKREGRLDLIDGTYALAPYISGAYGWSVQDKARELPSLVEN 256
BLAST of mRNA_S-dermatodea_contig11568.1000.1 vs. uniprot
Match: A0A7S1LUZ2_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1LUZ2_ALECA) HSP 1 Score: 88.2 bits (217), Expect = 4.800e-18 Identity = 55/130 (42.31%), Postives = 72/130 (55.38%), Query Frame = 1
Query: 37 PFPCLLNHHGGGFAVWSPDVPFYDGFSVRLCARERVVVVSVDYR---LSSEEP-----FPAGLNDCMSALEWACVGGDGALDTTAPGEGVILFGDSCGSNFVLALTLMAKRRGMLSAVKGVFAVSPFIAG 402
P PC++ HGGG A +P P + F R A++ V V VD+R L S FPAGLNDCMSALEW + + GE V++ G+S G N LAL + KR G LS +G +A+ P+IAG
Sbjct: 19 PLPCIIYLHGGGMAAGNPMGPPWTRFG-RAIAQQGVCVALVDFRNYALPSRPGKKIGRFPAGLNDCMSALEWV----NENKASLGVGERVVIAGESGGGNLTLALAMKCKRDGKLSLFQGFYALCPYIAG 143
BLAST of mRNA_S-dermatodea_contig11568.1000.1 vs. uniprot
Match: A0A235G131_9NOCA (Acetyl esterase/lipase n=1 Tax=Rhodococcus sp. OK302 TaxID=1882769 RepID=A0A235G131_9NOCA) HSP 1 Score: 89.4 bits (220), Expect = 5.450e-18 Identity = 56/148 (37.84%), Postives = 86/148 (58.11%), Query Frame = 1
Query: 28 VAGPFPCLLNHHGGGFAVWSPDVPFYDGFSVRLCARERVVVVSVDYR----LSSEEPFPAGLNDCMSALEWACVGGDGALDTTAPGEGVILFGDSCGSNFVLALTLMAKRRGMLSAVKGVFAVSPFIAGEQCYPCDK----LPSTVRS 447
A P ++ HGGG + + D P + + L + +VV++VD+R + PFPAGLNDCMSALEW V G+L ++ V++ G+S G N LA+ L AKR G+L ++ GV+A+ PFI+G +P ++ LPS + +
Sbjct: 119 AANAIPGVVYLHGGGMTMLAVDNPVHQQWCEDLVSAG-MVVIAVDFRNAGGVRGPHPFPAGLNDCMSALEWIHVH-RGSLGISS----VVVQGESGGGNLALAVALTAKRNGVLESIDGVYAMVPFISGGYGWPDERKLRELPSMIEN 260
BLAST of mRNA_S-dermatodea_contig11568.1000.1 vs. uniprot
Match: UPI000EF6C821 (alpha/beta hydrolase n=2 Tax=Natronorubrum halophilum TaxID=1702106 RepID=UPI000EF6C821) HSP 1 Score: 88.2 bits (217), Expect = 7.890e-18 Identity = 47/103 (45.63%), Postives = 60/103 (58.25%), Query Frame = 1
Query: 43 PCLLNHHGGGFAVWSPDVPFYDGFSVRLCARERVVVVSVDYRLSSEEPFPAGLNDCMSALEWACVGGDGALDTTAPGEGVILFGDSCGSNFVLALTLMAKRRG 351
P +L HGGG+ + D +DG +L A VVSVDYRL+ E PFPAGL DC +ALEWA D A + A + ++L GDS G N A L+A+ RG
Sbjct: 83 PLVLYFHGGGWVIGGVDT--HDGTCRKLAAESGYPVVSVDYRLAPEHPFPAGLEDCYAALEWAA---DAASELAADPDRIVLAGDSAGGNLAAATALLARDRG 180 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11568.1000.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11568.1000.1 >prot_S-dermatodea_contig11568.1000.1 ID=prot_S-dermatodea_contig11568.1000.1|Name=mRNA_S-dermatodea_contig11568.1000.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=163bp PQDTPRGSGVAGPFPCLLNHHGGGFAVWSPDVPFYDGFSVRLCARERVVVback to top mRNA from alignment at S-dermatodea_contig11568:7015..7503+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11568.1000.1 ID=mRNA_S-dermatodea_contig11568.1000.1|Name=mRNA_S-dermatodea_contig11568.1000.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=489bp|location=Sequence derived from alignment at S-dermatodea_contig11568:7015..7503+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11568:7015..7503+ >mRNA_S-dermatodea_contig11568.1000.1 ID=mRNA_S-dermatodea_contig11568.1000.1|Name=mRNA_S-dermatodea_contig11568.1000.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=978bp|location=Sequence derived from alignment at S-dermatodea_contig11568:7015..7503+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |