mRNA_S-dermatodea_contig1155.991.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1155.991.1 vs. uniprot
Match: A0A6H5L427_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L427_9PHAE) HSP 1 Score: 216 bits (549), Expect = 2.340e-59 Identity = 171/339 (50.44%), Postives = 187/339 (55.16%), Query Frame = 1
Query: 25 EFHRPSSSGGRLEQHLGAVESVD-GQSLTAIVESTTV-TRGASFSDVSRAI-----PASIAAARGGGGVAEGPGRGVGGRITGAHVDINTRELRRGGXXXXAGFGSSKARGLEDQP---PAKKLSGTGQQANGRRVRDEKDGGRRRPSDFVSGPAAAAESSPAK----GGMGRAKVDGVRSRPRRVPSQISVGSTITESSGASVCSI-------DRGEETGEQGGRPEKGTEDNKFRMQAGQSNTLVAVRLRPLLKLDREQVQVAKVLDHRVVVLMDPAKVNQEVDPLRVNRTREKR----------------YAFDYVFDATATQRAVYENTTKFLIQ 930
E +RPSSSGGRLEQHLGAVE VD A+V S V +R F RA PA I A G G GR GGR GA +TR + G A FGS +R + D+ K+ S Q R S G AE + GGM R DGV+ RPRRV SQ+S G ++ E RG E GE R GT+DNKFRMQAGQSNTLVAVRLRPLLK DRE V+VAKVLDHRVVVLMDPAKVNQEVDPLRVNRTREKR YAFDYVFDATATQRAVYENTTKFLIQ
Sbjct: 30 EQNRPSSSGGRLEQHLGAVECVDMPPPAVALVPSVPVASRTLDFPTGPRATAVAVTPARINADARGERDVRGGGR-AGGRDNGAAPTEHTRAFK-GSSSGGASFGSPGSRAVVDEQHHLSTKRTSDARQXXXXXXXXXXXXXXXXRRSVAEVGQTVGAEGNSGSLAKGGGMVRGNADGVKERPRRVSSQLSFGYSVAEGXXXXXXXXXXXXXXXQRGGEVGENTRRARLGTQDNKFRMQAGQSNTLVAVRLRPLLKHDREHVEVAKVLDHRVVVLMDPAKVNQEVDPLRVNRTREKRFVVGALLPLFQAHLLRYAFDYVFDATATQRAVYENTTKFLIQ 366
BLAST of mRNA_S-dermatodea_contig1155.991.1 vs. uniprot
Match: D8LJ10_ECTSI (Kinesin motor domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ10_ECTSI) HSP 1 Score: 189 bits (480), Expect = 3.960e-54 Identity = 152/307 (49.51%), Postives = 172/307 (56.03%), Query Frame = 1
Query: 1 QNNVGAEKEFHRPSSSGGRLEQHLGAVESVD-GQSLTAIVESTTV-TRGASFSDVSR-----AIPASIAAARGGGGVAEGPGRGVGGRITGAHVDINTRELRRGGXXXXAGFGSSKARGLEDQP---PAKKLSGTGQQANGRRVRDEKDGGRRRPSDFVSGPAAAAESSPAK----GGMGRAKVDGVRSRPRRVPSQISVGSTITESSGASVCSI--------DRGEETGEQGGRPEKGTEDNKFRMQAGQSNTLVAVRLRPLLKLDREQVQVAKVLDHRVVVLMDPAKVNQEVDPLRVNRTREKRY 855
+N + E RPSSSGGRLEQHLGAVESVD + A+V S V +R F R PA I A G G GR GGR GA +TR + GG A FGS +R + D+ P K+ S QQ G R RR S G AE + GG+ R DGV+ RPRRV SQ+S GS++TE RG E GE R GT+D KFRMQAGQSNTLVAVRLRPLLK DRE V+VAKVLDHRVVVLMDPAKVNQEVDPLRVNRTREKR+
Sbjct: 19 RNQGAGDAEQSRPSSSGGRLEQHLGAVESVDMPPAAAALVPSVPVASRTLGFPTGPRPTAVAVTPARINADARGERDVRGGGR-AGGRDNGAAPTEHTRAFK-GGSSGGASFGSPGSRVVVDEQHHLPTKRTSDARQQVVGGRRXXXXXXXXRRRSVAEVGQTVGAEGNSGSLARGGGVVRGNADGVKERPRRVSSQLSFGSSVTEGXXXXXXXXXXXXXXXGQRGGEVGENARRARLGTQDTKFRMQAGQSNTLVAVRLRPLLKHDREHVEVAKVLDHRVVVLMDPAKVNQEVDPLRVNRTREKRF 323
BLAST of mRNA_S-dermatodea_contig1155.991.1 vs. uniprot
Match: A0A7S2W4G7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4G7_9STRA) HSP 1 Score: 105 bits (263), Expect = 5.200e-23 Identity = 55/90 (61.11%), Postives = 69/90 (76.67%), Query Frame = 1
Query: 670 RMQAGQSNTLVAVRLRPLLKLDREQVQVAKVLDHRVVVLMDPAKVNQEVDPLRVNRTREKRYAFDYVFDATATQRAVYENTTKFLIQARL 939
R+ AGQSN LVAVR+RPLLK D+ Q V +VL+++VVV+MDP KV EVD LR +R+REKRYAFD+VF+ Q VY +TTKFL+Q L
Sbjct: 118 RLWAGQSNILVAVRVRPLLKHDKMQKNVVRVLENKVVVIMDPNKVRDEVDVLRQHRSREKRYAFDHVFEPRDDQVTVYSHTTKFLVQGVL 207
BLAST of mRNA_S-dermatodea_contig1155.991.1 vs. uniprot
Match: A0A482S7X7_9ARCH (Kinesin motor domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S7X7_9ARCH) HSP 1 Score: 97.8 bits (242), Expect = 2.590e-19 Identity = 53/99 (53.54%), Postives = 68/99 (68.69%), Query Frame = 1
Query: 652 TEDNKFRMQAGQSNTLVAVRLRPLLKLDREQVQVAKVLDHRVVVLMDPAKVNQEVDPLRVNRTREKRYAFDYVFDATATQRAVYENTTKFLIQARLGNW 948
T ++ M AGQSN LVAVR+RPL+K D + +VLD +VVV++DPA +++ D LR NR REK+YAFDYVFD + Q VY NTTKFLI L +
Sbjct: 27 TNEHMKAMWAGQSNVLVAVRVRPLMKHDIVKKSCVRVLDAKVVVILDPASGDKQ-DILRANRNREKQYAFDYVFDPNSRQEMVYNNTTKFLIHGVLDGY 124
BLAST of mRNA_S-dermatodea_contig1155.991.1 vs. uniprot
Match: A0A1W0A764_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A764_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 7.320e-19 Identity = 53/96 (55.21%), Postives = 68/96 (70.83%), Query Frame = 1
Query: 652 TEDNKFRMQAGQSNTLVAVRLRPLLKLDREQVQVAKVLDHRVVVLMDPAKVNQEVDPLRVNRTREKRYAFDYVFDATATQRAVYENTTKFLIQARL 939
T++ K M AGQ+N LVAVRLRP LK DR++ ++ KVL ++VVV++DP V +R NR+REK+YAFDYVF + QR VY NTTKFLI L
Sbjct: 695 TDEFKRAMWAGQANILVAVRLRPQLKHDRDRGEIVKVLGNKVVVVLDPGNQKDVVGKMR-NRSREKKYAFDYVFSPSDDQRTVYNNTTKFLIHGIL 789
BLAST of mRNA_S-dermatodea_contig1155.991.1 vs. uniprot
Match: A0A1V9ZPN4_9STRA (Kinesin-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZPN4_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 8.130e-19 Identity = 53/96 (55.21%), Postives = 68/96 (70.83%), Query Frame = 1
Query: 652 TEDNKFRMQAGQSNTLVAVRLRPLLKLDREQVQVAKVLDHRVVVLMDPAKVNQEVDPLRVNRTREKRYAFDYVFDATATQRAVYENTTKFLIQARL 939
TE+ K M AGQ+N LVAVRLRP LK DR++ ++ KVL ++VVV++DP V +R NR+REKRYAFDYVF + QR VY +TTKFL+ L
Sbjct: 26 TEEFKRAMWAGQANILVAVRLRPQLKHDRDRGEIVKVLGNKVVVVLDPGNQKDVVGKMR-NRSREKRYAFDYVFSPSDDQRTVYTHTTKFLVHGIL 120
BLAST of mRNA_S-dermatodea_contig1155.991.1 vs. uniprot
Match: A0A024TUT4_9STRA (Kinesin-like protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TUT4_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.090e-18 Identity = 61/125 (48.80%), Postives = 78/125 (62.40%), Query Frame = 1
Query: 565 TITESSGASVCSIDRGEETGEQGGRPEKGTEDNKFRMQAGQSNTLVAVRLRPLLKLDREQVQVAKVLDHRVVVLMDPAKVNQEVDPLRVNRTREKRYAFDYVFDATATQRAVYENTTKFLIQARL 939
T T+ +G + ++D E E E+ TE K M AGQ+N LVAVRLRP LK DR++ ++ KVL ++VVV+MDP V +R +R+REKRYAFDYVF Q VY NTTKFLI L
Sbjct: 104 TNTDDAGDTGLTLDEPNELNE----TEEETEAFKRAMWAGQANILVAVRLRPQLKHDRDRGEIVKVLGNKVVVVMDPGNQKDVVGKMR-HRSREKRYAFDYVFSPLDGQETVYNNTTKFLIHGIL 223
BLAST of mRNA_S-dermatodea_contig1155.991.1 vs. uniprot
Match: A0A485KW97_9STRA (Kinesin-like protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KW97_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 2.090e-18 Identity = 55/96 (57.29%), Postives = 67/96 (69.79%), Query Frame = 1
Query: 652 TEDNKFRMQAGQSNTLVAVRLRPLLKLDREQVQVAKVLDHRVVVLMDPAKVNQEVDPLRVNRTREKRYAFDYVFDATATQRAVYENTTKFLIQARL 939
TE K M AGQ+N LVAVRLRP LK DR++ ++ KVL ++VVV+MDP V LR +R+REKRYAFDYVF + Q+ VY NTTKFLI L
Sbjct: 77 TEAFKRAMWAGQANILVAVRLRPQLKHDRDRGEIVKVLGNKVVVVMDPGNQKDVVGKLR-HRSREKRYAFDYVFSPSDGQQTVYTNTTKFLIHGIL 171
BLAST of mRNA_S-dermatodea_contig1155.991.1 vs. uniprot
Match: A0A067CGK1_SAPPC (Kinesin-like protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CGK1_SAPPC) HSP 1 Score: 95.9 bits (237), Expect = 3.650e-18 Identity = 53/96 (55.21%), Postives = 67/96 (69.79%), Query Frame = 1
Query: 652 TEDNKFRMQAGQSNTLVAVRLRPLLKLDREQVQVAKVLDHRVVVLMDPAKVNQEVDPLRVNRTREKRYAFDYVFDATATQRAVYENTTKFLIQARL 939
TE K M AGQ+N LVAVRLRP LK DR++ ++ KVL ++VVV++DP V +R +R+REKRYAFDYVF + QR VY NTTKFL+ L
Sbjct: 20 TEAFKRAMWAGQANVLVAVRLRPQLKHDRDRGEIVKVLGNKVVVVLDPGNQKDVVGKMR-HRSREKRYAFDYVFAPSDGQRTVYNNTTKFLVHGIL 114
BLAST of mRNA_S-dermatodea_contig1155.991.1 vs. uniprot
Match: W4GMD4_9STRA (Kinesin-like protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMD4_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 8.170e-18 Identity = 54/99 (54.55%), Postives = 68/99 (68.69%), Query Frame = 1
Query: 643 EKGTEDNKFRMQAGQSNTLVAVRLRPLLKLDREQVQVAKVLDHRVVVLMDPAKVNQEVDPLRVNRTREKRYAFDYVFDATATQRAVYENTTKFLIQARL 939
E+ T+ K M AGQ+N LVAVRLRP LK DR++ ++ KVL ++VVV++DP V LR +R+REKRYAFDYVF + Q VY NTTKFLI L
Sbjct: 99 EEDTDAFKRAMWAGQANILVAVRLRPQLKHDRDRGEIVKVLGNKVVVVLDPGNHKDVVGKLR-HRSREKRYAFDYVFSPSDGQATVYNNTTKFLIHGIL 196 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1155.991.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1155.991.1 >prot_S-dermatodea_contig1155.991.1 ID=prot_S-dermatodea_contig1155.991.1|Name=mRNA_S-dermatodea_contig1155.991.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=325bp QNNVGAEKEFHRPSSSGGRLEQHLGAVESVDGQSLTAIVESTTVTRGASFback to top mRNA from alignment at S-dermatodea_contig1155:15928..17948+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1155.991.1 ID=mRNA_S-dermatodea_contig1155.991.1|Name=mRNA_S-dermatodea_contig1155.991.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2021bp|location=Sequence derived from alignment at S-dermatodea_contig1155:15928..17948+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1155:15928..17948+ >mRNA_S-dermatodea_contig1155.991.1 ID=mRNA_S-dermatodea_contig1155.991.1|Name=mRNA_S-dermatodea_contig1155.991.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1950bp|location=Sequence derived from alignment at S-dermatodea_contig1155:15928..17948+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |