mRNA_S-dermatodea_contig11516.981.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11516.981.1 vs. uniprot
Match: A0A0A6YYW3_SACLA (Mitochondrial triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (Fragment) n=1 Tax=Saccharina latissima TaxID=309358 RepID=A0A0A6YYW3_SACLA) HSP 1 Score: 286 bits (733), Expect = 2.980e-92 Identity = 136/147 (92.52%), Postives = 141/147 (95.92%), Query Frame = 1
Query: 1 QVAAQDCWTKGNGAFTGETSADMLKDMGVGWCIIGHSERRQKGETDAECAAKAAYALEHGISVMGCIGESKEERESGSTMDVVIRQMAAYAGSVKDWDKFVVAYEPVWAIGTGLTASPEQAQEVHEGLRKWIAENVSVSVAEKASVV 441
+VAAQDCWTKGNGAFTGETSADMLKDMGV WCIIGHSERRQKGETDAECAAKAAYA EHG+SVMGCIGESKEERESGSTMDVV+RQMAAYAGSVKDWD FVVAYEPVWAIGTGLTASPEQAQEVHEGLRKWIAENVS SVAEK ++
Sbjct: 86 KVAAQDCWTKGNGAFTGETSADMLKDMGVNWCIIGHSERRQKGETDAECAAKAAYAQEHGLSVMGCIGESKEERESGSTMDVVLRQMAAYAGSVKDWDNFVVAYEPVWAIGTGLTASPEQAQEVHEGLRKWIAENVSASVAEKIRII 232
BLAST of mRNA_S-dermatodea_contig11516.981.1 vs. uniprot
Match: D7FP79_ECTSI (Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP79_ECTSI) HSP 1 Score: 271 bits (694), Expect = 3.840e-86 Identity = 126/147 (85.71%), Postives = 137/147 (93.20%), Query Frame = 1
Query: 1 QVAAQDCWTKGNGAFTGETSADMLKDMGVGWCIIGHSERRQKGETDAECAAKAAYALEHGISVMGCIGESKEERESGSTMDVVIRQMAAYAGSVKDWDKFVVAYEPVWAIGTGLTASPEQAQEVHEGLRKWIAENVSVSVAEKASVV 441
+V+AQDCWT GNGA+TGETSADMLKDMGVGWCIIGHSERRQKGET+ ECA KAAYA EHG+SVMGCIGESKEERESGSTMDVVI Q+ AYA SVKDWDKFV+AYEPVWAIGTGLTASPEQAQEVHEGLRKW+AENVS SVA+K ++
Sbjct: 60 KVSAQDCWTGGNGAYTGETSADMLKDMGVGWCIIGHSERRQKGETNEECAVKAAYAQEHGLSVMGCIGESKEERESGSTMDVVIGQLKAYAASVKDWDKFVIAYEPVWAIGTGLTASPEQAQEVHEGLRKWVAENVSASVADKVRII 206
BLAST of mRNA_S-dermatodea_contig11516.981.1 vs. uniprot
Match: A0A0A6YYW1_DICDH (Mitochondrial triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Dictyota dichotoma TaxID=2876 RepID=A0A0A6YYW1_DICDH) HSP 1 Score: 258 bits (658), Expect = 1.640e-80 Identity = 121/147 (82.31%), Postives = 132/147 (89.80%), Query Frame = 1
Query: 1 QVAAQDCWTKGNGAFTGETSADMLKDMGVGWCIIGHSERRQKGETDAECAAKAAYALEHGISVMGCIGESKEERESGSTMDVVIRQMAAYAGSVKDWDKFVVAYEPVWAIGTGLTASPEQAQEVHEGLRKWIAENVSVSVAEKASVV 441
+VAAQDCW KGNGAFTGETSADMLKDMG+ WCIIGHSERRQKGE D EC AKA YA+E GISV+GCIGE+KEERESG+TMDVV RQMAAY +VKDWDKFVVAYEPVWAIGTGLTASPEQAQEVH LRKWIAENVS +VA+K ++
Sbjct: 86 KVAAQDCWLKGNGAFTGETSADMLKDMGIEWCIIGHSERRQKGEMDEECGAKAGYAIEKGISVIGCIGETKEERESGATMDVVKRQMAAYTATVKDWDKFVVAYEPVWAIGTGLTASPEQAQEVHLELRKWIAENVSAAVADKVRII 232
BLAST of mRNA_S-dermatodea_contig11516.981.1 vs. uniprot
Match: A0A7S1UAP0_9STRA (Triosephosphate isomerase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAP0_9STRA) HSP 1 Score: 203 bits (517), Expect = 1.400e-64 Identity = 95/128 (74.22%), Postives = 110/128 (85.94%), Query Frame = 1
Query: 1 QVAAQDCWTKGNGAFTGETSADMLKDMGVGWCIIGHSERRQKGETDAECAAKAAYALEHGISVMGCIGESKEERESGSTMDVVIRQMAAYAGSVKDWDKFVVAYEPVWAIGTGLTASPEQAQEVHEGL 384
+VAAQD WTKGNGAFTGETSADML+D+GV W ++GHSERR KGETDAE A KAAYA+E G++V+ CIGE+ EERE+G TMDVV Q+AAYA V+DW K V+AYEPVWAIGTG+TASPEQAQEVH L
Sbjct: 45 KVAAQDVWTKGNGAFTGETSADMLEDLGVEWTLVGHSERRAKGETDAELAEKAAYAIEKGVNVIACIGETLEEREAGRTMDVVNAQVAAYAEKVEDWSKVVIAYEPVWAIGTGVTASPEQAQEVHAAL 172
BLAST of mRNA_S-dermatodea_contig11516.981.1 vs. uniprot
Match: A0A835ZGW0_9STRA (Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGW0_9STRA) HSP 1 Score: 212 bits (539), Expect = 5.920e-63 Identity = 102/149 (68.46%), Postives = 121/149 (81.21%), Query Frame = 1
Query: 4 VAAQDCWTKGNGAFTGETSADMLKDMGVGWCIIGHSERRQKGETDAECAAKAAYALEHGISVMGCIGESKEERESGSTMDVVIRQMAAYA---GSVKDWDKFVVAYEPVWAIGTGLTASPEQAQEVHEGLRKWIAENVSVSVAEKASVV 441
V++QDCWT GNGA TGETSADMLKDMGV W I+GHSERRQKGETD CA KAAYA+ G+ VM CIGE++EERE+G TM+VV+RQMAAY S K +D FVVAYEPVWAIGTGL A+PE+AQ+VH+GLR W+A N+S VA K ++
Sbjct: 81 VSSQDCWT-GNGAHTGETSADMLKDMGVQWTIVGHSERRQKGETDELCAKKAAYAISKGLKVMACIGETREEREAGKTMEVVVRQMAAYKKHLDSSKAFDAFVVAYEPVWAIGTGLVATPEEAQQVHKGLRDWVANNISSDVAAKLRIM 228
BLAST of mRNA_S-dermatodea_contig11516.981.1 vs. uniprot
Match: A0A7R9UCW3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCW3_9STRA) HSP 1 Score: 211 bits (537), Expect = 1.930e-62 Identity = 98/147 (66.67%), Postives = 119/147 (80.95%), Query Frame = 1
Query: 1 QVAAQDCWTKGNGAFTGETSADMLKDMGVGWCIIGHSERRQKGETDAECAAKAAYALEHGISVMGCIGESKEERESGSTMDVVIRQMAAYAGSVKDWDKFVVAYEPVWAIGTGLTASPEQAQEVHEGLRKWIAENVSVSVAEKASVV 441
+V+AQD WT+GNGAFTGETSADML+D+GV W ++GHSERR KGETDAE A KAAYA+ GI+V+ CIGES EERE+G TMDVV Q+AAYA V DWDK V+AYEP+WAIGTG TA+PE AQEVH GLR+++A + VAE ++
Sbjct: 112 KVSAQDVWTQGNGAFTGETSADMLEDLGVQWTLVGHSERRAKGETDAELATKAAYAISKGINVIACIGESLEEREAGKTMDVVNAQVAAYAEKVTDWDKVVIAYEPIWAIGTGKTATPEMAQEVHAGLREFMANTLGKDVAESVRII 258
BLAST of mRNA_S-dermatodea_contig11516.981.1 vs. uniprot
Match: A0A7S2RBC4_9STRA (Triosephosphate isomerase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBC4_9STRA) HSP 1 Score: 199 bits (507), Expect = 4.530e-61 Identity = 92/146 (63.01%), Postives = 111/146 (76.03%), Query Frame = 1
Query: 4 VAAQDCWTKGNGAFTGETSADMLKDMGVGWCIIGHSERRQKGETDAECAAKAAYALEHGISVMGCIGESKEERESGSTMDVVIRQMAAYAGSVKDWDKFVVAYEPVWAIGTGLTASPEQAQEVHEGLRKWIAENVSVSVAEKASVV 441
V QD W G GA+TGETSA+M D+G W ++GHSERR KGETDA+ AAKAAYAL+ G+ V+ CIGES EERE+G T++VV Q+AAYA + DW VVAYEP+WAIGTGLTASPEQAQEVHE LR W ++NVS VA ++
Sbjct: 53 VGVQDVWMNGAGAYTGETSAEMAGDLGAKWALVGHSERRGKGETDADVAAKAAYALDKGLGVIACIGESLEEREAGKTLEVVSAQVAAYATQISDWSNVVVAYEPIWAIGTGLTASPEQAQEVHEALRGWFSKNVSPEVANDLRII 198
BLAST of mRNA_S-dermatodea_contig11516.981.1 vs. uniprot
Match: D8LXP8_BLAHO (Glyceraldehyde 3-phosphate dehydrogenase n=5 Tax=Blastocystis TaxID=12967 RepID=D8LXP8_BLAHO) HSP 1 Score: 205 bits (521), Expect = 2.240e-60 Identity = 94/147 (63.95%), Postives = 120/147 (81.63%), Query Frame = 1
Query: 1 QVAAQDCWTKGNGAFTGETSADMLKDMGVGWCIIGHSERRQKGETDAECAAKAAYALEHGISVMGCIGESKEERESGSTMDVVIRQMAAYAGSVKDWDKFVVAYEPVWAIGTGLTASPEQAQEVHEGLRKWIAENVSVSVAEKASVV 441
QVAAQD W++GNGAFTGETSA+MLKD+ VGW I+GHSERR KGE+DAE A KAAYA ++G+ V+ C+GES +ERESG +VV RQ+ AYA ++K+WD V+AYEP+WAIGTG A+P QA+EVH LRKW+ ENVS +VA+K ++
Sbjct: 73 QVAAQDVWSQGNGAFTGETSAEMLKDLKVGWAIVGHSERRGKGESDAEVATKAAYAQKNGLKVICCLGESLQERESGRFAEVVTRQLKAYADAIKNWDDAVIAYEPIWAIGTGKVATPAQAEEVHAILRKWLRENVSGAVADKVRII 219
BLAST of mRNA_S-dermatodea_contig11516.981.1 vs. uniprot
Match: A0A6A5AZ05_9STRA (Triosephosphate isomerase (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AZ05_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.280e-59 Identity = 88/146 (60.27%), Postives = 111/146 (76.03%), Query Frame = 1
Query: 4 VAAQDCWTKGNGAFTGETSADMLKDMGVGWCIIGHSERRQKGETDAECAAKAAYALEHGISVMGCIGESKEERESGSTMDVVIRQMAAYAGSVKDWDKFVVAYEPVWAIGTGLTASPEQAQEVHEGLRKWIAENVSVSVAEKASVV 441
V+ QD W G GA+TGE SA++LKD G G+ I+GHSERR+KGE++ E A KAAYAL G+SV+ CIGE+K +R++ T+ VV Q+AAYA VKDW K VVAYEPVWAIGTGLTASP QAQ+VH G+R W+ NVS +VA ++
Sbjct: 73 VSGQDVWHHGAGAYTGEVSAELLKDAGAGYSIVGHSERREKGESNEEVARKAAYALSKGLSVIACIGETKTQRDANQTLQVVTDQLAAYAAHVKDWSKVVVAYEPVWAIGTGLTASPAQAQDVHAGIRNWLKTNVSAAVANSTRII 218
BLAST of mRNA_S-dermatodea_contig11516.981.1 vs. uniprot
Match: Q9M7R8_ACHBI (Triosephosphate isomerase + glyceraldehyde-3-phosphate dehydrogenase n=2 Tax=Saprolegniaceae TaxID=4764 RepID=Q9M7R8_ACHBI) HSP 1 Score: 202 bits (515), Expect = 1.560e-59 Identity = 92/146 (63.01%), Postives = 116/146 (79.45%), Query Frame = 1
Query: 4 VAAQDCWTKGNGAFTGETSADMLKDMGVGWCIIGHSERRQKGETDAECAAKAAYALEHGISVMGCIGESKEERESGSTMDVVIRQMAAYAGSVKDWDKFVVAYEPVWAIGTGLTASPEQAQEVHEGLRKWIAENVSVSVAEKASVV 441
V+ QD W++GNGAFTGE SA+MLKD G+ + IIGHSERRQKGET+ E A+KA YAL G+SV+ CIGE+K ERE+ TM VV Q+AAYA ++ DW V+AYEPVWAIGTGLTA+PEQAQEVH G+R W+ +NVS +VA+ ++
Sbjct: 68 VSGQDTWSRGNGAFTGEVSAEMLKDAGINYTIIGHSERRQKGETNEEVASKAGYALSKGVSVIACIGETKIEREAQKTMQVVTEQLAAYAKNITDWSNVVIAYEPVWAIGTGLTATPEQAQEVHAGIRSWLKQNVSSAVADATRII 213 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11516.981.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11516.981.1 >prot_S-dermatodea_contig11516.981.1 ID=prot_S-dermatodea_contig11516.981.1|Name=mRNA_S-dermatodea_contig11516.981.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=147bp QVAAQDCWTKGNGAFTGETSADMLKDMGVGWCIIGHSERRQKGETDAECAback to top mRNA from alignment at S-dermatodea_contig11516:4945..6798+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11516.981.1 ID=mRNA_S-dermatodea_contig11516.981.1|Name=mRNA_S-dermatodea_contig11516.981.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1854bp|location=Sequence derived from alignment at S-dermatodea_contig11516:4945..6798+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11516:4945..6798+ >mRNA_S-dermatodea_contig11516.981.1 ID=mRNA_S-dermatodea_contig11516.981.1|Name=mRNA_S-dermatodea_contig11516.981.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=882bp|location=Sequence derived from alignment at S-dermatodea_contig11516:4945..6798+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |