mRNA_S-dermatodea_contig11508.975.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11508.975.1 vs. uniprot
Match: D7FXS1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXS1_ECTSI) HSP 1 Score: 404 bits (1038), Expect = 1.660e-122 Identity = 357/776 (46.01%), Postives = 408/776 (52.58%), Query Frame = 1
Query: 1 MQDLLGLDAGDFEGVDFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGRPSEATQLSLRTAXXXXXXAEPGDTGLDNGTQGSK-------SVDAERGSPLPEHACGQDNA--------LSLLRRIERCCLESNPAEVEKAVATLSSCLGQSAHGIGSSXXXXXXXXXXXXXXXXXGSGAATLWGMSPQAAEAALSACRAALQLCRGEYEQLLRETALFAASSKSPPSVTPLAAGVVSQGGD---SIAARVKAFVVGGNGAVPTQASTAAANDEGGSTTGNPAEPTA--NGRAGADVPGANSTAPAALWRAAEAMWAGAAALCLFWQENYSGPELGSERTRNIDAFFAEKL--------------GLASSSSXXXGAASAQEVANVALACDGELPYPKSSLAGSLLVARAILAAVAKESSTSRATAELATP--------ALLWSPSVPQDQRSPAAGGAVIGGSGGSXXXXXXXXXXXXXTGGREDAQQAFWDAAGGLSSASWWSARACVTHGRLLLSSN-RSETLWTEALGLFGRAVGLFGGGVAPDEEAXXXXXXXXXXXGRRGGTGGKGVEDELVRRRIAGLVWLEWGLAQHHFQDPSKGKESFARAKMASGLTAGLTGALGKRTKHQQSQVAQLVLVASSACPAAAEASTMTRAETALIXXXXXXXXXXXXXXXXXXXXXXXXXXNGGVTVSVGGAVGEGSXXXXXXXXXXXXXXXAAGPELGETTAIGEGGMRAAARRTVHAADSELLEDTAFVERDLENPGKLQ 2199
M++LLGL AGDFEGVDF A P++ + T GD + G S +VDA RG+PLPEHA +A L LLRR+ERCCLES PAEVE AVA LSS + A G S + + M P A AAL ACRAAL+LCRGEYE LLRETALF+A G S GG SI A V+AFVVG +GR G PGA AA+WRAAEA WAGAAALCLF QENY+GPELG++RT I A+ A+ L XXX AQ++AN+AL CDGELPYP+SSL GSL++AR IL AVA + R T P A +WSP PAA G +GG+ + ++++F +A G LSSA WWS RACVTH RLL+SS+ RSETLW EA GLFGRAV LFGGG P XXXXXX G E V RR++G VWLEWGLAQHHFQDPSKGKESFARAK ASGLTAGLTGALGKRTK+QQSQ+AQLVLVASSA P +A ETA + XXXXX G XXXXXXXXXXXXXXX GPELG +TA+GE G RAAARRTVHA DS LLED +FV+RDLENPGKLQ
Sbjct: 1 MEELLGLGAGDFEGVDFAASSDSDDEQVPNGIPDSPVDDPASPTSGPTENGMAAA-PTDPASSTATTVVKPRDSTPVGDGPITGGGSPSAGESKEEAAVDAVRGAPLPEHAGEGPSAAAAAAAANLPLLRRVERCCLESRPAEVEAAVAALSSHVRGDASD-GHSREGSAETADVCASKDDKAAARVCVEAMPPAVARAALDACRAALRLCRGEYEDLLRETALFSAD------------GCTSDGGGGSRSIDACVRAFVVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRRG--CPGA-----AAVWRAAEAAWAGAAALCLFLQENYAGPELGADRTEAICAWCADVLVGTYGGXXXXXXXXXXXXXXXXXXXXXVAQDLANIALTCDGELPYPQSSLPGSLVLARTILMAVAGTGTGRRNTPGHTAPTAASPEREAPVWSPDGFSFAVLPAAAGGSAVAAGGAGCG--------------DSSEESFQEAVGSLSSAEWWSGRACVTHARLLISSSGRSETLWREARGLFGRAVSLFGGGAGPAVXXXXXXXX--------------GAE---VARRVSGQVWLEWGLAQHHFQDPSKGKESFARAKEASGLTAGLTGALGKRTKYQQSQIAQLVLVASSATPVGEDAGH----ETAPVAPPPPPAXXXXX---------------GETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPELGMSTAVGEEGRRAAARRTVHAEDSALLEDISFVQRDLENPGKLQ 705
BLAST of mRNA_S-dermatodea_contig11508.975.1 vs. uniprot
Match: A0A5D6Y333_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y333_9STRA) HSP 1 Score: 103 bits (258), Expect = 4.060e-19 Identity = 100/313 (31.95%), Postives = 131/313 (41.85%), Query Frame = 1
Query: 895 EAMWAGAAALCLFWQENYSGPELGSERTRNIDAFFAEKLGL-ASSSSXXXGAASAQEVANVALACDGELPYPKSSLAGSLLVARAILAAVAKESSTSRATAELATPALLWSPSVPQDQRSPAAGGAVIGGSGGSXXXXXXXXXXXXXTGGREDAQQAFWDAAGGLSSASWWSARACVTHGRLLLSSNRSETLWTEALGLFGRAVGLFGGGVAPDEEAXXXXXXXXXXXGRRGGTGGKGVEDELVRRRIAGLVWLEWGLAQHHFQDPSKGKESFARAKMASGLTAGLTGALGKRTKHQQSQVAQLVLVASSACP 1830
E ++ G A ++ Q NY+GP E+ R+I+A A AS S A VAL DGE P+ LL+ R +L V + + WS +V + AA S G+ G L SASWW+ARA V H RLLL+ S TLW EA F RA+ A E +R R+ +EWGLAQHHF +GK SF RAK SG++A L+G++GKRTK QQ AQ+VL+A+S P
Sbjct: 148 EVLFVGVALFNMYVQANYTGPAFEPEQLRDINALAARFFDAGASDCSNDAAEKKLHSDALVALQVDGESPFSICEYPQFLLLGRCLLHVVGNATHRN------------WSFAVGEAGTDSAAQDVFSSPSVGAELLALF----------------------GKLHSASWWNARAAVAHERLLLTKESSNTLWFEARRGFSRAI----------RHAALFDCPA----------------SEYLRARLE----VEWGLAQHHFAKNRQGKRSFERAKELSGVSAQLSGSMGKRTKFQQKSTAQMVLLAASKHP 396
BLAST of mRNA_S-dermatodea_contig11508.975.1 vs. uniprot
Match: M4B454_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B454_HYAAE) HSP 1 Score: 98.6 bits (244), Expect = 1.920e-17 Identity = 98/323 (30.34%), Postives = 135/323 (41.80%), Query Frame = 1
Query: 865 TAPAALWRAAEAMWAGAAALCLFWQENYSGPELGSERTRNIDAFFAEKLGLASSSSXXXGAASAQEVANVALACDGELPYPKSSLAGSLLVARAILAAVAKESSTSRATAELATPALLWSPSVPQDQRSPAAGGAVIGGSGGSXXXXXXXXXXXXXTGGREDAQQAFWDAAGGLSSASWWSARACVTHGRLLLSSNRSETLWTEALGLFGRAVGLFGGGVAPDEEAXXXXXXXXXXXGRRGGTGGKGVED----ELVRRRIAGLVWLEWGLAQHHFQDPSKGKESFARAKMASGLTAGLTGALGKRTKHQQSQVAQLVLVASS 1821
+A + L A E ++ G A L ++ Q NY+GP +E R++ + ++ SS A+ A VAL DGE P+ LL+ R +L V + + S AA V G + G A + + G + SA+WW+ARA V H RLLLS S TLW EA RRG D E + + ++EWGLAQHHF GK +F RAK SG+T L+G+LGKRTK+QQ VAQ+VL+A+S
Sbjct: 121 SAESRLVAAYEVLYIGVAFLNMYVQANYTGPAFENETLRDVLDLATRLVTCSTDSSDKK----ARNDALVALQVDGESPFSICEYPQFLLLGRCLLEFVGNHA---------------------YEDWSVAAHEMVHGENDNEVPDSVVEGPVKRQVSGGA-AVRVLGELLGRIKSAAWWNARAAVAHERLLLSKQPSNTLWFEA---------------------------------RRGYIQTLTTSDLFAFEEDTQYLLARAYVEWGLAQHHFDKNKHGKATFERAKEISGVTVQLSGSLGKRTKYQQKSVAQMVLLAAS 384
BLAST of mRNA_S-dermatodea_contig11508.975.1 vs. uniprot
Match: A0A3M6VQ42_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQ42_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 3.030e-16 Identity = 94/311 (30.23%), Postives = 131/311 (42.12%), Query Frame = 1
Query: 901 MWAGAAALCLFWQENYSGPELGSERTRNIDAFFAEKLGLASSSSXXXGAASAQEVANVALACDGELPYPKSSLAGSLLVARAILAAVAKESSTSRATAELATPALLWSPSVPQDQRSPAAGGAVIGGSGGSXXXXXXXXXXXXXTGGREDAQQAFWDAAGGLSSASWWSARACVTHGRLLLSSNRSETLWTEALGLFGRAVGLFGGGVAPDEEAXXXXXXXXXXXGRRGGTGGKGVED----ELVRRRIAGLVWLEWGLAQHHFQDPSKGKESFARAKMASGLTAGLTGALGKRTKHQQSQVAQLVLVASS 1821
M+ G A L ++ Q NY+GP E R++ A + ++ SS + A V+L DGE P+ LL+ R +L V + + A + + Q V+ G TGG A +A + + SA+WW+ARA V H RLLLS S TLW EA RRG + E + + ++EWGLAQHHF GK +FARAK SG++ LTG++GKRTK QQ VAQ+VL+A+S
Sbjct: 134 MFLGIALLNMYVQANYTGPAFEKETIRDVLDLTAILVTRSTGSSDKKSHSDAL----VSLQVDGESPFSICEYPQFLLIGRCLLDFVGNHAFNDWSVA---------ANEIVHGQNDNEVSDDVVEGP-----------TKRHITGGA--AIRALGELLEQIKSAAWWNARAAVAHERLLLSKQPSNTLWFEA---------------------------------RRGYIQTLKTNELFAFEKTTQYLHARAYVEWGLAQHHFDKNKHGKATFARAKEISGVSVQLTGSMGKRTKFQQKSVAQMVLLAAS 385
BLAST of mRNA_S-dermatodea_contig11508.975.1 vs. uniprot
Match: A0A2P4XRT2_9STRA (Tetratricopeptide repeat protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XRT2_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 5.110e-16 Identity = 91/313 (29.07%), Postives = 128/313 (40.89%), Query Frame = 1
Query: 895 EAMWAGAAALCLFWQENYSGPELGSERTRNIDAFFAEKLGLASSSSXXXGAASAQEVANVALACDGELPYPKSSLAGSLLVARAILAAVAKESSTSRATAELATPALLWSPSVPQDQRSPAAGGAVIGGSGGSXXXXXXXXXXXXXTGGREDAQQAFWDAAGGLSSASWWSARACVTHGRLLLSSNRSETLWTEALGLFGRAVGLFGGGVAPDEEAXXXXXXXXXXXGRRGGTGGKGVED----ELVRRRIAGLVWLEWGLAQHHFQDPSKGKESFARAKMASGLTAGLTGALGKRTKHQQSQVAQLVLVASS 1821
E ++ G A ++ Q NY+GP E R++ + ++ S+ A VAL DGE P+ LLV R +L V + + A + V D A + GG+ A +A + + SASWW+ARA V H RLLL+ S TLW EA RRG + E + + ++EWGLAQHHF GK +FARAK SG++ L+G++GKRTK QQ VAQ+VL+A+S
Sbjct: 134 EILFVGVAFFDMYVQANYTGPAFEKETLRDVLDLVTRLVNCSTESNDKK----THSEALVALQVDGESPFSICEYPQFLLVGRCLLDFVGNHAYNDWSVAANEVVSGQNDNEVSDDVVEGPAKRQITGGA----------------------AIRALGEMLDQIKSASWWNARATVAHERLLLAKQPSNTLWFEA---------------------------------RRGYIQTLKTAELFAFEKDTQYLLARAYVEWGLAQHHFDKNKHGKSTFARAKEISGVSVQLSGSMGKRTKFQQKSVAQMVLLAAS 387
BLAST of mRNA_S-dermatodea_contig11508.975.1 vs. uniprot
Match: A0A662X4G8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4G8_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 9.130e-16 Identity = 96/313 (30.67%), Postives = 135/313 (43.13%), Query Frame = 1
Query: 895 EAMWAGAAALCLFWQENYSGPELGSERTRNIDAFFAEKLGLASSSSXXXGAASAQEV-ANVALACDGELPYPKSSLAGSLLVARAILAAVAKESSTSRATAELATPALLWSPSVPQDQRSPAAGGAVIGGSGGSXXXXXXXXXXXXXTGGREDAQQAFWDAAGGLSSASWWSARACVTHGRLLLSSNRSETLWTEALGLFGRAVG---LFGGGVAPDEEAXXXXXXXXXXXGRRGGTGGKGVEDELVRRRIAGLVWLEWGLAQHHFQDPSKGKESFARAKMASGLTAGLTGALGKRTKHQQSQVAQLVLVASS 1821
E ++ G A ++ Q NY+GP E R++ A L SS++ A V+L DGE P+ LL+ R +L V S + A + V + Q G V+ G +GG A +A + L SA+WWSARA V H RLLL+ S TLW EA + + + LF +P E + + ++EWGLAQHHF GK +FARA+ SG+T L+G++GKRTK QQ VAQ+VL+A+S
Sbjct: 130 EVLFVGIAFFNMYVQANYTGPAFERETLRDVLTLAARVLSPPSSTADAANDDKKMHSDALVSLQVDGESPFSICEYPQFLLLGRCLLHFVGNHSYNDWSVA---------ADEVVKGQNDNEVGDDVVEGP-----------AKRPVSGGA--AIRALGEQLEQLKSAAWWSARAAVAHERLLLAKLPSNTLWFEARRGYLQTLNTPALF----SPVTET----------------------------QYLLARAYVEWGLAQHHFDKNKHGKRTFARAQELSGVTVQLSGSMGKRTKFQQKSVAQMVLLAAS 388
BLAST of mRNA_S-dermatodea_contig11508.975.1 vs. uniprot
Match: G4ZPH7_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZPH7_PHYSP) HSP 1 Score: 92.0 bits (227), Expect = 2.080e-15 Identity = 89/313 (28.43%), Postives = 128/313 (40.89%), Query Frame = 1
Query: 895 EAMWAGAAALCLFWQENYSGPELGSERTRNIDAFFAEKLGLASSSSXXXGAASAQEVANVALACDGELPYPKSSLAGSLLVARAILAAVAKESSTSRATAELATPALLWSPSVPQDQRSPAAGGAVIGGSGGSXXXXXXXXXXXXXTGGREDAQQAFWDAAGGLSSASWWSARACVTHGRLLLSSNRSETLWTEALGLFGRAVGLFGGGVAPDEEAXXXXXXXXXXXGRRGGTGGKGVED----ELVRRRIAGLVWLEWGLAQHHFQDPSKGKESFARAKMASGLTAGLTGALGKRTKHQQSQVAQLVLVASS 1821
E ++ G A ++ Q NY+GP E R++ + ++ S+ A VAL DGE P+ LL+ R +L V + + A V D A + GG+ A +A + + SA+WW+ARA V H RLLL+ S TLW EA RRG + E + + ++EWGLAQHHF +GK +FARAK SG+T L+G+LGKRTK Q+ +AQ+VL+A+S
Sbjct: 138 EILFIGVAFFDMYVQANYTGPAFEKETLRDLLDLSTHLITCSTESNDKK----THSDALVALQVDGESPFSICEFPQFLLIGRCLLDFVGNHAYNDWSVAAKEVAHGENDNEVSDDAMEGPAKRQITGGA----------------------AIRALGEMLEQIKSAAWWNARAAVAHERLLLAKQPSNTLWFEA---------------------------------RRGYIQTLKATELFAFEKDTQYLLARAYVEWGLAQHHFDKNKRGKSTFARAKEVSGVTVQLSGSLGKRTKFQRKSLAQMVLLAAS 391
BLAST of mRNA_S-dermatodea_contig11508.975.1 vs. uniprot
Match: A0A024GK40_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GK40_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 5.580e-15 Identity = 54/150 (36.00%), Postives = 80/150 (53.33%), Query Frame = 1
Query: 1384 LSSASWWSARACVTHGRLLLSSNRSETLWTEALGLFGRAVGLFGGGVAPDEEAXXXXXXXXXXXGRRGGTGGKGVEDELVRRR----IAGLVWLEWGLAQHHFQDPSKGKESFARAKMASGLTAGLTGALGKRTKHQQSQVAQLVLVASS 1821
++SASWW+ARA + H R+LL+ + +TLW E G + K E+ + R I ++EWGLAQH ++GKE+FA+A++ +GLTA L+GA+G++TK QQ VAQ+VL+ASS
Sbjct: 227 VTSASWWNARASLAHQRILLAKSACDTLWNEV---------------------------------NTGFSAYKEAEELFQQNRKTSSILARFYVEWGLAQHFSDKENRGKENFAKAQILTGLTAELSGAIGRKTKFQQKSVAQMVLLASS 343
BLAST of mRNA_S-dermatodea_contig11508.975.1 vs. uniprot
Match: A0A6G0X1Y6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X1Y6_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 6.180e-15 Identity = 92/322 (28.57%), Postives = 126/322 (39.13%), Query Frame = 1
Query: 901 MWAGAAALCLFWQENYSGPELGSERTRNIDAFFAEKLGLASSSSXXXGAASAQEVANVALACDGELPYPKSSLAGSLLVARAILAAVAKESSTSRATAELATPALLWSPSVPQDQRSPAAGGAVIGGSGGSXXXXXXXXXXXXXTGGREDAQQAFWDAAGGLSSASWWSARACVTHGRLLLSSNRSETLWTEALGLFGRAVGLFGGGVAPDEEAXXXXXXXXXXXGRRGGTGGKGVEDELVRRRIAGLVWLEWGLAQHHFQDPSKGKESFARAKMASGLTAGLTGALGKRTKHQQSQVAQLVLVASSACPAAAEASTMTRAE 1866
++AGAA L LF Q NY+GP + ++ + L S S A+ A V+L DGE P+ L + R +L V +S + WS S P D + G + LS+A+WW+ RA +TH RLL++ S TLWTE F VG + +A LEWGLAQH F+ KG+ SF A +GL ++G+LGKRTK+Q VAQ+VL+ASS + AS AE
Sbjct: 150 LYAGAAFLNLFVQLNYTGPAMEDSALEDLLPLVSVLL---SDDSQVANKANLHRHAIVSLQVDGETPFSICEYPIFLEMGRCLLHFVGLQSHIN------------WSHSEPVDNITKFI------------PLSEYIRQPRVLNGIAQPISTQITQVVRTLSTATWWTGRALMTHQRLLITKEPSNTLWTETRYCFSFVVG-----------------------------------ESYASEYLAARAHLEWGLAQHFFEIKGKGRASFDTAMETTGLRVQMSGSLGKRTKYQVKSVAQMVLLASSKVENTSVASEAAEAE 409
BLAST of mRNA_S-dermatodea_contig11508.975.1 vs. uniprot
Match: F0W833_9STRA (Tetratricopeptide repeat protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W833_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 7.290e-15 Identity = 53/146 (36.30%), Postives = 80/146 (54.79%), Query Frame = 1
Query: 1384 LSSASWWSARACVTHGRLLLSSNRSETLWTEALGLFGRAVGLFGGGVAPDEEAXXXXXXXXXXXGRRGGTGGKGVEDELVRRRIAGLVWLEWGLAQHHFQDPSKGKESFARAKMASGLTAGLTGALGKRTKHQQSQVAQLVLVASS 1821
++SASWW+ARA + H R+LL+ + +TLW E G + ++A + + A + +EWGLAQH F ++GK +FA+A+ +GLTA L+GA+GK+TK QQ+ VAQ+VL+ASS
Sbjct: 201 ITSASWWNARASLAHQRILLAKSACDTLWNEVYA-----------GFSAYKDAQDISQGHCS-----------------LYKHTAARLHIEWGLAQHFFDKDNRGKANFAKAQSLTGLTAELSGAIGKKTKFQQNGVAQMVLLASS 318 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11508.975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11508.975.1 >prot_S-dermatodea_contig11508.975.1 ID=prot_S-dermatodea_contig11508.975.1|Name=mRNA_S-dermatodea_contig11508.975.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=733bp MQDLLGLDAGDFEGVDFVDSSDSDEEQQPVGRVGAAAAAVAPAGQSGANDback to top mRNA from alignment at S-dermatodea_contig11508:2187..7422+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11508.975.1 ID=mRNA_S-dermatodea_contig11508.975.1|Name=mRNA_S-dermatodea_contig11508.975.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5236bp|location=Sequence derived from alignment at S-dermatodea_contig11508:2187..7422+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11508:2187..7422+ >mRNA_S-dermatodea_contig11508.975.1 ID=mRNA_S-dermatodea_contig11508.975.1|Name=mRNA_S-dermatodea_contig11508.975.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=4398bp|location=Sequence derived from alignment at S-dermatodea_contig11508:2187..7422+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |