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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 1455 |
| Cds size | 1236 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622924206.337065-UTR-S-dermatodea_contig1150:17121..17338 | 1622924206.337065-UTR-S-dermatodea_contig1150:17121..17338 | Saccorhiza dermatodea SderLu1190fm monoicous | UTR | S-dermatodea_contig1150 17122..17338 - |
| 1694079092.254314-UTR-S-dermatodea_contig1150:17121..17338 | 1694079092.254314-UTR-S-dermatodea_contig1150:17121..17338 | Saccorhiza dermatodea SderLu1190fm monoicous | UTR | S-dermatodea_contig1150 17122..17338 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1150.971.1 >prot_S-dermatodea_contig1150.971.1 ID=prot_S-dermatodea_contig1150.971.1|Name=mRNA_S-dermatodea_contig1150.971.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=412bp
MVDITSKRCAYNACLKQPSYGRVGSTKTEFCSEHMKAGMVDVRTNRCTYH
ECLKRSSYGMEGNKERKFCSEHKMTGMVDVTSKRCAYHGCLKQPSYGRVG
STKPEFCNEHKKTGMVDVRNKRCAYNGCLKQPSYGMEGNKERKFCSEHKM
AGMVDVTSKRCAYHGCLKQPSYGRVGSTKREFCSEHKRAGTVNVGSKRCG
YHGCSKISSYGTEGNKERKFCSEHKRAGMVDVKSKRCAYHGCCKFPSYGT
ESSRKTKYCSEHKTAGMVDVLHKRCASEGCVKYAVYGPDGSGRQRLLCSR
HFKEGHHASDVEAATARKESKEMGGEAGGQVSRPNTKKRPLRVERLPVQV
QKIPGGVDCGPSKWKRMRVLQRKKRGATQEAQQVSALVRESSQTPPPTGF
TPFSAQGSSDQS back to topmRNA from alignment at S-dermatodea_contig1150:12465..17338- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig1150.971.1 ID=mRNA_S-dermatodea_contig1150.971.1|Name=mRNA_S-dermatodea_contig1150.971.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4874bp|location=Sequence derived from alignment at S-dermatodea_contig1150:12465..17338- (Saccorhiza dermatodea SderLu1190fm monoicous)
AGGTGCAAAGGGCCTATTTGTGTATACACGCCAGCGACCTCCTCGCGGGG
TAGGGAGGGCTGGTTCTACAGCATACGAGCGTTGGGTGGGCTTGTAAATC
CTTCAGCAGGCTGTCGATAACGTTTTGTGCACGAATCGCGGGTGTTCCAC
CAGCGCCACCTTCGGGTTGGAAGACACTGCGAGGGGGGAGTTCTGCAGCG
AACCCAAGAGGGCGGCCATGGTTGACATCACAAGCAAACGGTGTGCCTAC
AATGCATGTCTCAAGCAGCCATCGTATGGCAGGGTGGGCAGCACGAAGAC
AGAGTTCTGCAGCGAACACATGAAGGCGGGTATGGTGGACGTCCGTACCA
ACCGGTGTACCTACCATGAATGTCTCAAGCGGTCATCGTATGGCATGGAG
GGCAACAAGGAGAGAAAGTTCTGCAGCGAACACAAGATGACAGGTATGGT
GGACGTCACAAGCAAACGGTGTGCCTACCATGGATGCCTCAAGCAACCAT
CGTATGGCAGGGTGGGCAGCACGAAGCCGGAGTTCTGCAACGAACACAAG
AAGACGGGTATGGTGGACGTCCGTAATAAACGGTGTGCCTACAATGGATG
CCTCAAGCAACCATCGTATGGCATGGAGGGCAACAAGGAGAGAAAATTCT
GCAGTGAACACAAGATGGCGGGCATGGTGGACGTCACAAGCAAACGGTGT
GCCTACCATGGATGCCTCAAGCAACCATCGTATGGCAGGGTGGGCAGCAC
GAAGAGGGAGTTTTGCAGCGAACACAAGAGGGCGGGTACGGTAAACGTCG
GGAGCAAACGGTGTGGCTACCATGGATGTTCCAAGATCTCATCGTACGGC
ACAGAGGGCAACAAGGAGAGAAAGTTCTGCAGCGAACACAAGAGGGCGGG
TATGGTGGACGTCAAGAGCAAACGGTGTGCCTACCATGGATGCTGCAAGT
TTCCATCGTATGGCACGGAGAGCAGCAGGAAGACTAAGTACTGCAGCGAA
CACAAGACCGCGGGAATGGTAGACGTTTTGCACAAAAGGTGCGCCAGCGA
GGGTTGCGTCAAGTACGCAGTGTACGGTCCGGATGGCAGCGGACGACAAA
GGTTGCTTTGCTCCCGACACTTCAAGGAGGGCCATCATGGTAAGCACGTT
GATGTACGTACTTCATCTACAAGTGTTTTTCAGAAGTGCAATGCGATGGT
GTGCGAATGCGTATGAAGCAACCCCCTTGGGAGTTTAGGTTGTCATTGTC
CGATCTCTGTTTCATCGTTGTCGAAAACGCCCACGAACCGCGCATGGCCG
CTGACTGTTTGTGTGTCAGTGAGTCCATGTTTTTGTTTAGGCTCGCCAGG
ATCTTGACTTGTTGACCGTTGACAGTTTCCTGTCTTGAGACGAATCGAAC
CGTTTATTCCACGACGGTGACTTTGCTCTGCACCTGGAGCATCAGACGTT
GAGGCAGCAACGGCAAGGAAGGAGTCCAAGGAGATGGGAGGGGAAGCTGG
AGGGCAGGTTTCTCGCCCGAATACGAAGAAGCGGCCACTGAGGGTCGAGC
GTCTCCCCGTGCAAGTGCAGAAGGTGTGTGCGCTGCTCTCCTTGGAGCCG
TACTGCGGTGCTTCTTGTTTGTAGTGTCGGGGAAATAGGAAATTGGGAGG
GCTACCGCTATTGCTTGGCCCATACGTGTTCCTTCAAAAAGCATATAAAT
GTTGATTAAACCTAGAACCAAATATCCAGCTGTGGGAACATCCCGCACGG
TGGAAATATTTCGCAGAACCCCGAAGCTCCCCCCGATTGAAAGGGTCTTA
CTGCCGGGCGTTTGGAGGCTAACTAGGCTTACGATTTGGGCAAGTTTCTC
GTCCTGCCTACAACTTTTTGGACGGGTAGTAGTTGTGTCTGAGAGCGGCA
CGCCGTGGTGTTCGACTCCCCGCCTAGGGTGCCGCTTCCACAAAACGTCA
CGTTTTGGCGCATTTCTGACGCGAAATCAGCGATTTCACGGTGGGCATTG
CGGAAATGACTTAGAAAGCAGTAGCTGTTCTGCGTCAAAGAGGGGGTCAC
GTCTACCAAGACTCCCACACTCTACGCTTCCATCAGCACCAACAACAGCA
GCGGGAATTTGCCGCACCGTGACGTGGTTATTCTGCACAAGCTGTCAGGT
GTTCGATGGACCGTCAAGTAAGCAAAGGTTTTGTGTCCAAAGGACCCAGA
TGTAGAGATAGCGTAATGGCGAGCAAAACCCAGGAAAGCCCCCAAGGCAG
ATTGCCTTGGTCGTCACTTTCCCGTAAAGTCCTGCGGCAGGCCTTTGGAA
CTATATCTCGCCCTGTGGGCCTGTCATATACCAGTAGTGTTTACTGCATC
TACCGCCGCGGTTTTCATACTGCAGTCCTTTGTGCAGGTCGCTTCCGTGT
CGTGATGGGCTGTCGGCATTTTGTATTGTTAAACATGAAGGTGTACTGCA
AGGCCTGTTGTGGTTGAGACCCCTTATAGCTCCCTGCACCTGCACTGCAA
GCAATGAAGCAGTGTATTTTGTATTTCAAGCCTAACCTGTGAATTAATAT
TGGTGAAACGCACTCACAAAATATACGAACGTCTCGACAGATACCCGGAG
GCGTGGATTGTGGTCCTTCAAAATGGAAGCGGATGCGAGTTCTTCAAAGA
AAGAAGCGCGGTGCAACGCAAGAGGCACAGCAGGTATGTATCGATCATAA
TCGGTACGATGATATTATGTTTTTTATACTCATCCTGTTGCTCCAAGGGA
TCCCGAACACACACCCGCCCGTGACACTGATGTGTTTTGGTTCTCGCAGC
AGGTTCAGAACGTTGAGTACACCACCTGACGGTACACCCAAGCAAAGCTC
GTTCGTTCATACTGCAGGCGATAAACTATCTCGAGTTAAAACTCTTACCG
AACGTCTAATCCCAAATTCCAATGGCGGTTTTTCTCTGTGTATTTGTTTT
GTCGAATACGTAAACAAGGTTAAGTTGAGGTTGTGTCACGTTTACTCTTG
CCCCCCCAAAACCTTGGCGAGGAGCCGATTAAGGGTCTAGCCAGTAGCCT
AGACTGGTGATATGTGACAAGGTCTCGCCCTCTTCAGCCTGCGACACCTA
GCTGGCCAAAGACTACGCGCCCGCCCCGGTCTGATAAGTGCCGATGTCGC
ATGCAAAACACGGCGACACTGTTCGTCACTACCGTAGCTTTTACTATTTT
CCAAGTCTTGTCTATCGCGGTTTCCGGTAGCCGTTACCAGTAACTAGCAC
ATTGGACACCCTCCGAACATATCTGCCGTGATTACTCGTGTACATACTTT
ATGGGCGCCATACCTCTTTCTGCCAGATATCTATGAATTTTTCGAGTCTC
CATCGCCCAAACAGAGATGCGTCACACCTCCTCGAGGGGTTCTACAACTC
GTGATGAATATGGCAGCAAACCTCGCAAAGGCATTTGATGGACCAACTCC
TCCGTCGTGTCCTTCCCGCTCTCCTAAATCCCCAATCGGGAAAGAAGGGT
GATCTCTACCACACCTTGTGGCTATCGGGTTTCACTACTCCATAGCTGTC
TTAGCGGTAACATGCTTGAATTCCACCTTCAGCCTTGCTGTGACCATTAG
TCTACCCACTTTACATTGCATAGGGAAAACCTTCATCAGTAACTAGTAGT
TAGCCACGGCTACGCCGGTTAGTTGTGTGCTTTGGCATATCTGATTGCCG
GTGGCGGTAGTACCGGCGGAAGGCGTTCACCTTCGGCAAACGTTCACCCC
ACGGAGGAAGACGAAGGTGCGAGAAGGGGCTGGCTGCTGCTGCTGTATGC
GGGCAGTGGTGTGCTTGTGTTGTGCTGTCTCCGTCGAGCAGAGGGAGAGG
CAAAGCAGTAGGCGATGACAGGAGTAGGGAATTCACGAAAATACAAACCT
AACAAGATTTCAAGTTATACACCAATATATCATAACCTACAGATGGGTGC
TGCTCCCGAAAAACAGAGGGAAAGAGGATGCCTGATTAGATATGATGCTT
AGCACATAAGGAGGAGAGACAGCACGTACCTGGCTGCTGGCCGACGCGGG
CGGCGGGTGGCCGTGTTTATAGCTGCATGATGTTCTGTCTGGGAGCTCGC
TGCTGCTTGTGTGGCTGCTGCTTGAGCGCACTGGTGTGTTGTTTTTGCGG
TCTCGAGAAGATGCTTTCTATGTCCGCGGTGTGGCTGCTGAATGCTGCTT
CTGGCGGCGTGGCGGCGGGAGCAACACGGGTGCTCGAACGAACACGCGAG
CGAGCCGCAGTTGACGGCGGTCGCCTACCGCGCCCGAGCGGGACGGGGAT
CGCGAGGTGGAGGCCGAGTGCAAAAATCAAGTGCGGCCACCTACTTTGCA
TACTGCTGTACAGCTATACCTTTGGCGCTTAACACAAAAAAAGATAGAGC
TCGACACAAACATCGAGTTATTTGGCATAAAAATCCTTCTCCACATCGCT
GTATAAAATCGTACAGAAAGCCTATAAGATTCGCTGGAAATAATCATTCT
CTAAACCGTAATGAAGGAAGGTTCCTGGTTGTATAAATTAAAATTATTGG
TATTAACGTTTGCCCGTGTAGGGTTTCTAGTAGAGCTCCGCTAGAAATGT
AGATTCCTTCTCTACAGCAGGCCTCAGGATGACATCAACTCAACCTCACA
CGAGATCGACCGATTGCCGGAGTTCCGTCTGCGGTAACCAGGAAACGAAC
CGTGTTTGTTTCGCGCGACTGTCCAATTGTTTTCCAGATGTGTTGCCAAT
GTCTGACCCCGATTTACGTGCACGTCTTCCGTTGCAGGTCTCAGCACTTG
TCCGGGAATCGTCTCAAACCCCGCCTCCCACGGGATTCACGCCATTCTCT
GCACAGGGCAGCAGCGATCAATCC back to topCoding sequence (CDS) from alignment at S-dermatodea_contig1150:12465..17338- >mRNA_S-dermatodea_contig1150.971.1 ID=mRNA_S-dermatodea_contig1150.971.1|Name=mRNA_S-dermatodea_contig1150.971.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2472bp|location=Sequence derived from alignment at S-dermatodea_contig1150:12465..17338- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGTTGACATCACAAGCAAACGGTGTGCCTACAATGCATGTCTCAAGCA
GCCATCGTATGGCAGGGTGGGCAGCACGAAGACAGAGTTCTGCAGCGAAC
ACATGAAGGCGGGTATGGTGGACGTCCGTACCAACCGGTGTACCTACCAT
GAATGTCTCAAGCGGTCATCGTATGGCATGGAGGGCAACAAGGAGAGAAA
GTTCTGCAGCGAACACAAGATGACAGGTATGGTGGACGTCACAAGCAAAC
GGTGTGCCTACCATGGATGCCTCAAGCAACCATCGTATGGCAGGGTGGGC
AGCACGAAGCCGGAGTTCTGCAACGAACACAAGAAGACGGGTATGGTGGA
CGTCCGTAATAAACGGTGTGCCTACAATGGATGCCTCAAGCAACCATCGT
ATGGCATGGAGGGCAACAAGGAGAGAAAATTCTGCAGTGAACACAAGATG
GCGGGCATGGTGGACGTCACAAGCAAACGGTGTGCCTACCATGGATGCCT
CAAGCAACCATCGTATGGCAGGGTGGGCAGCACGAAGAGGGAGTTTTGCA
GCGAACACAAGAGGGCGGGTACGGTAAACGTCGGGAGCAAACGGTGTGGC
TACCATGGATGTTCCAAGATCTCATCGTACGGCACAGAGGGCAACAAGGA
GAGAAAGTTCTGCAGCGAACACAAGAGGGCGGGTATGGTGGACGTCAAGA
GCAAACGGTGTGCCTACCATGGATGCTGCAAGTTTCCATCGTATGGCACG
GAGAGCAGCAGGAAGACTAAGTACTGCAGCGAACACAAGACCGCGGGAAT
GGTAGACGTTTTGCACAAAAGGTGCGCCAGCGAGGGTTGCGTCAAGTACG
CAGTGTACGGTCCGGATGGCAGCGGACGACAAAGGTTGCTTTGCTCCCGA
CACTTCAAGGAGGGCCATCATGATGGTTGACATCACAAGCAAACGGTGTG
CCTACAATGCATGTCTCAAGCAGCCATCGTATGGCAGGGTGGGCAGCACG
AAGACAGAGTTCTGCAGCGAACACATGAAGGCGGGTATGGTGGACGTCCG
TACCAACCGGTGTACCTACCATGAATGTCTCAAGCGGTCATCGTATGGCA
TGGAGGGCAACAAGGAGAGAAAGTTCTGCAGCGAACACAAGATGACAGGT
ATGGTGGACGTCACAAGCAAACGGTGTGCCTACCATGGATGCCTCAAGCA
ACCATCGTATGGCAGGGTGGGCAGCACGAAGCCGGAGTTCTGCAACGAAC
ACAAGAAGACGGGTATGGTGGACGTCCGTAATAAACGGTGTGCCTACAAT
GGATGCCTCAAGCAACCATCGTATGGCATGGAGGGCAACAAGGAGAGAAA
ATTCTGCAGTGAACACAAGATGGCGGGCATGGTGGACGTCACAAGCAAAC
GGTGTGCCTACCATGGATGCCTCAAGCAACCATCGTATGGCAGGGTGGGC
AGCACGAAGAGGGAGTTTTGCAGCGAACACAAGAGGGCGGGTACGGTAAA
CGTCGGGAGCAAACGGTGTGGCTACCATGGATGTTCCAAGATCTCATCGT
ACGGCACAGAGGGCAACAAGGAGAGAAAGTTCTGCAGCGAACACAAGAGG
GCGGGTATGGTGGACGTCAAGAGCAAACGGTGTGCCTACCATGGATGCTG
CAAGTTTCCATCGTATGGCACGGAGAGCAGCAGGAAGACTAAGTACTGCA
GCGAACACAAGACCGCGGGAATGGTAGACGTTTTGCACAAAAGGTGCGCC
AGCGAGGGTTGCGTCAAGTACGCAGTGTACGGTCCGGATGGCAGCGGACG
ACAAAGGTTGCTTTGCTCCCGACACTTCAAGGAGGGCCATCATGCATCAG
ACGTTGAGGCAGCAACGGCAAGGAAGGAGTCCAAGGAGATGGGAGGGGAA
GCTGGAGGGCAGGTTTCTCGCCCGAATACGAAGAAGCGGCCACTGAGGGT
CGAGCGTCTCCCCGTGCAAGTGCAGAAGCATCAGACGTTGAGGCAGCAAC
GGCAAGGAAGGAGTCCAAGGAGATGGGAGGGGAAGCTGGAGGGCAGGTTT
CTCGCCCGAATACGAAGAAGCGGCCACTGAGGGTCGAGCGTCTCCCCGTG
CAAGTGCAGAAGATACCCGGAGGCGTGGATTGTGGTCCTTCAAAATGGAA
GCGGATGCGAGTTCTTCAAAGAAAGAAGCGCGGTGCAACGCAAGAGGCAC
AGCAGATACCCGGAGGCGTGGATTGTGGTCCTTCAAAATGGAAGCGGATG
CGAGTTCTTCAAAGAAAGAAGCGCGGTGCAACGCAAGAGGCACAGCAGGT
CTCAGCACTTGTCCGGGAATCGTCTCAAACCCCGCCTCCCACGGGATTCA
CGCCATTCTCTGCACAGGGCAGCAGCGATCAATCCGTCTCAGCACTTGTC
CGGGAATCGTCTCAAACCCCGCCTCCCACGGGATTCACGCCATTCTCTGC
ACAGGGCAGCAGCGATCAATCC back to top
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