mRNA_S-dermatodea_contig11476.959.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11476.959.1 vs. uniprot
Match: A0A6H5JMK4_9PHAE (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMK4_9PHAE) HSP 1 Score: 208 bits (529), Expect = 2.180e-60 Identity = 101/168 (60.12%), Postives = 122/168 (72.62%), Query Frame = 2
Query: 395 PRGLLAAVIVACPRSTCTVTAFSQQAVWFDRTPTMPPHTSRSTPVAEVDLKPELDAKTFSLQNAFYFAELSKIAYEPESEARGLIMGNSTHRGLGFDRFHWFEGGEEARKNPFDAIHDTEAFVAASDDVIAVVFRGTKTIDNWWTNLMLNRRPCPQSWGMPPPGGEVH 898
PR +AA + S+ + S Q WFD T MPPHT + + EV++KP+L AK FS NAF+FA LSKIAY E EARGL++GN+T RGLGFDRFHWFEGGEEARKNPF +HDT+AFVAASDD+IAVVFRGT I +W+TN + + CPQ W +PPPGG VH
Sbjct: 44 PRTTVAADALGSSTSSVGGISSSAQRAWFDPTNAMPPHTWKISRSPEVNMKPDLSAKGFSALNAFFFAGLSKIAYASEDEARGLLVGNATERGLGFDRFHWFEGGEEARKNPFGNLHDTDAFVAASDDIIAVVFRGTMGIADWYTNAKVQPKKCPQEWRVPPPGGTVH 211
BLAST of mRNA_S-dermatodea_contig11476.959.1 vs. uniprot
Match: D8LDK8_ECTSI (Putative lipase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDK8_ECTSI) HSP 1 Score: 158 bits (399), Expect = 2.600e-42 Identity = 72/120 (60.00%), Postives = 91/120 (75.83%), Query Frame = 2
Query: 542 LKPELDAKTFSLQNAFYFAELSKIAYEPESEARGLIMGNSTHRGLGFDRFHWFEGGEEARKNPFDAIHDTEAFVAASDDVIAVVFRGTKTIDNWWTNLMLNRRPCPQSWGMPPPGGEVHQ 901
+KP L+ FS QNAFYFA L KIAY+PE EA+GL+ GNST+ GLGFDRFHWF+ E A+++ FDAI DTEAFVAA+DD++AVVFRGTK + +W TNL ++ R C + W P G VH+
Sbjct: 1 MKPNLNTTKFSTQNAFYFASLCKIAYKPEQEAKGLVKGNSTNDGLGFDRFHWFDADEAAKRSSFDAIQDTEAFVAANDDMVAVVFRGTKELTDWATNLDISPRDCAEQWEAPDAVGAVHE 120
BLAST of mRNA_S-dermatodea_contig11476.959.1 vs. uniprot
Match: A0A6H5KWV7_9PHAE (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWV7_9PHAE) HSP 1 Score: 119 bits (297), Expect = 4.930e-27 Identity = 60/129 (46.51%), Postives = 81/129 (62.79%), Query Frame = 2
Query: 518 STPVAEVDLKPELDAKTFSLQNAFYFAELSKIAYEPESEARGLIMGNSTHRGLGFDRFHWFEGGEEAR-KNPFDAIHDTEAFVAASDDVIAVVFRGTKTIDNWWTNLMLNRRPCPQSWGMPPPGGEVHQ 901
S PV+EV+LKP++ A +FS QN F+F+++SK+ Y P E + G GLG++ FHWFE + +D I DTEAFVAA+DDVI VVFRG+ + +W TN L RR P W + G +VHQ
Sbjct: 51 SAPVSEVELKPDVKATSFSAQNGFFFSKMSKLVYSPRIEVESAMQGKD---GLGYEHFHWFEADPAVSGASIWDRIQDTEAFVAANDDVILVVFRGSSELTDWTTNFNLVRRLVPSDWLLDGLGCDVHQ 176
BLAST of mRNA_S-dermatodea_contig11476.959.1 vs. uniprot
Match: D8LDL1_ECTSI (Lipase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDL1_ECTSI) HSP 1 Score: 62.0 bits (149), Expect = 2.380e-7 Identity = 28/56 (50.00%), Postives = 38/56 (67.86%), Query Frame = 2
Query: 734 DAIHDTEAFVAASDDVIAVVFRGTKTIDNWWTNLMLNRRPCPQSWGMPPPGGEVHQ 901
DAIHDTEAFV A+DD+I VVFRGT+ + +W TNL + R W + G ++H+
Sbjct: 71 DAIHDTEAFVTANDDMIVVVFRGTQELTDWTTNLNMGLRSARNEWKIDLEGCDLHR 126
BLAST of mRNA_S-dermatodea_contig11476.959.1 vs. uniprot
Match: A0A852YXT7_9ACTN (Triacylglycerol lipase n=2 Tax=Actinopolyspora TaxID=1849 RepID=A0A852YXT7_9ACTN) HSP 1 Score: 58.2 bits (139), Expect = 3.700e-6 Identity = 36/89 (40.45%), Postives = 52/89 (58.43%), Query Frame = 2
Query: 548 PELD--AKTFSLQNAFYFAELSKIAYEPESEARGLIMGNSTHRGLGFDRFHWFEGGEEARKNPFDAIHDTEAFVAASDDVIAVVFRGTK 808
PELD + L++A++ A+ +++AY E E R ST GFDRF +F G +A I DT+ FVAAS+++I V FRGT+
Sbjct: 4 PELDHTVTDYRLEHAYWLAKAAELAYAGEDEMR------STTSEWGFDRFRYFHGETDASL----PIQDTQGFVAASENMIIVAFRGTE 82
BLAST of mRNA_S-dermatodea_contig11476.959.1 vs. uniprot
Match: UPI00201249D8 (MFS transporter n=2 Tax=Saccharopolyspora erythraea TaxID=1836 RepID=UPI00201249D8) HSP 1 Score: 58.5 bits (140), Expect = 6.290e-6 Identity = 41/112 (36.61%), Postives = 58/112 (51.79%), Query Frame = 2
Query: 548 PELD--AKTFSLQNAFYFAELSKIAYEPESEARGLIMGNSTHRGLGFDRFHWFEGGEEARKNPFDAIHDTEAFVAASDDVIAVVFRGTK--TIDNWWTNLMLNRRPCPQSWG 871
PELD A +S + A++ A +++ Y+ E+E R S GFDRFH+F I DT+ FVAASD++I V FRGT+ I +W T+ P P + G
Sbjct: 446 PELDHNATGYSSRQAYWLARAAELTYQDEAEMR------SETGKWGFDRFHYFYTQHHGLP-----IEDTQGFVAASDNMIVVAFRGTEPSNIKDWLTDASGPAAPGPGAKG 546
BLAST of mRNA_S-dermatodea_contig11476.959.1 vs. uniprot
Match: A4F5W2_SACEN (Probable lipase n=1 Tax=Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338) TaxID=405948 RepID=A4F5W2_SACEN) HSP 1 Score: 54.7 bits (130), Expect = 5.370e-5 Identity = 40/111 (36.04%), Postives = 59/111 (53.15%), Query Frame = 2
Query: 551 ELDAKT--FSLQNAFYFAELSKIAYEPESEARGLIMGNSTHRGLGFDRFHWFEGGEEARKNPFDAIHDTEAFVAASDDVIAVVFRGTK--TIDNWWTNLMLNRRPCPQSWG 871
ELD K +S + A++ A +++ Y+ E+ R S + GFDRFH+F + + P I DT+ FVAASD +I V FRGT+ I +W T+ P P + G
Sbjct: 5 ELDHKATGYSTRQAYWLARAAELTYQDEAAMR------SETQKWGFDRFHYFY--TQHHELP---IEDTQGFVAASDKMIFVAFRGTEPTNIKDWLTDASGPASPGPGAKG 104
BLAST of mRNA_S-dermatodea_contig11476.959.1 vs. uniprot
Match: A0A1H9WKU1_9ACTN (Lipase (Class 3) n=1 Tax=Streptomyces sp. yr375 TaxID=1761906 RepID=A0A1H9WKU1_9ACTN) HSP 1 Score: 54.3 bits (129), Expect = 7.450e-5 Identity = 38/106 (35.85%), Postives = 55/106 (51.89%), Query Frame = 2
Query: 560 AKTFSLQNAFYFAELSKIAYEPESEARGLIMGNSTHRGLGFDRFHWFEGGEEARKNPFDAIHDTEAFVAASDDVIAVVFRGTK--TIDNWWTNLMLNRRPCPQSWG 871
A +S +A++ AE ++ AY+ +EA L R GFDRF F PF I DT+A+VAASD +I V FRGT+ + +W +++ P P G
Sbjct: 14 ASGYSHTHAYWLAEAARAAYKSPAEAESLA------RDWGFDRFRHFSSPHTM---PFP-IDDTQAYVAASDRMIVVAFRGTEPTNLRDWLSDVNTPPVPGPAGRG 109 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11476.959.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11476.959.1 >prot_S-dermatodea_contig11476.959.1 ID=prot_S-dermatodea_contig11476.959.1|Name=mRNA_S-dermatodea_contig11476.959.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=171bp MMPRGLLAAVIVACPRSTCTVTAFSQQAVWFDRTPTMPPHTSRSTPVAEVback to top mRNA from alignment at S-dermatodea_contig11476:1017..5534+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11476.959.1 ID=mRNA_S-dermatodea_contig11476.959.1|Name=mRNA_S-dermatodea_contig11476.959.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4518bp|location=Sequence derived from alignment at S-dermatodea_contig11476:1017..5534+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11476:1017..5534+ >mRNA_S-dermatodea_contig11476.959.1 ID=mRNA_S-dermatodea_contig11476.959.1|Name=mRNA_S-dermatodea_contig11476.959.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1026bp|location=Sequence derived from alignment at S-dermatodea_contig11476:1017..5534+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |