mRNA_S-dermatodea_contig11444.934.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11444.934.1 vs. uniprot
Match: D7G3Q5_ECTSI (Type I fatty acid synthase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q5_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 2.300e-20 Identity = 46/56 (82.14%), Postives = 50/56 (89.29%), Query Frame = 1
Query: 1 FVPLQVAGALNLSDGAVRLGLDLDFLVLFSSASAVLGLSGEPGYAAANGCLDGLAW 168
F+ +VAGALNLS A +GL+LDFLVLFSSASAVLGLSGEPGYAAANGCLDGLAW
Sbjct: 2361 FLEAKVAGALNLSGVASTMGLELDFLVLFSSASAVLGLSGEPGYAAANGCLDGLAW 2416
BLAST of mRNA_S-dermatodea_contig11444.934.1 vs. uniprot
Match: K0FAH1_9NOCA (Mycocerosate synthase n=5 Tax=Nocardia TaxID=1817 RepID=K0FAH1_9NOCA) HSP 1 Score: 60.8 bits (146), Expect = 2.180e-9 Identity = 31/55 (56.36%), Postives = 40/55 (72.73%), Query Frame = 1
Query: 1 FVPLQVAGALNLSDGAVRLGLDLDFLVLFSSASAVLGLSGEPGYAAANGCLDGLA 165
F P +VAGAL+L G+DLD+ VLFSSAS+++G+S + GYAAAN LD LA
Sbjct: 1825 FAP-KVAGALHLDSALTAAGIDLDYFVLFSSASSIVGISPQSGYAAANSVLDALA 1878
BLAST of mRNA_S-dermatodea_contig11444.934.1 vs. uniprot
Match: UPI001C477F0B (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Nocardia iowensis TaxID=204891 RepID=UPI001C477F0B) HSP 1 Score: 58.5 bits (140), Expect = 1.430e-8 Identity = 28/51 (54.90%), Postives = 38/51 (74.51%), Query Frame = 1
Query: 13 QVAGALNLSDGAVRLGLDLDFLVLFSSASAVLGLSGEPGYAAANGCLDGLA 165
+VAGALNL + G+DLD VL+SSAS+++G++ + GYAAAN LD LA
Sbjct: 1863 KVAGALNLDNALTAAGIDLDLFVLYSSASSIVGINPQSGYAAANSVLDTLA 1913
BLAST of mRNA_S-dermatodea_contig11444.934.1 vs. uniprot
Match: A0A7G1KNC8_9NOCA (Putative polyketide synthase n=1 Tax=Nocardia wallacei TaxID=480035 RepID=A0A7G1KNC8_9NOCA) HSP 1 Score: 58.2 bits (139), Expect = 1.950e-8 Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 1
Query: 13 QVAGALNLSDGAVRLGLDLDFLVLFSSASAVLGLSGEPGYAAANGCLDGLAW 168
+V GAL+L G++LDF VL+SSAS + GLS + GYA+AN LD LAW
Sbjct: 1883 KVHGALHLDRATTAAGVELDFFVLYSSASGIAGLSPQLGYASANSALDALAW 1934
BLAST of mRNA_S-dermatodea_contig11444.934.1 vs. uniprot
Match: UPI0005BE8D14 (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Nocardia asiatica TaxID=209252 RepID=UPI0005BE8D14) HSP 1 Score: 57.0 bits (136), Expect = 4.970e-8 Identity = 28/51 (54.90%), Postives = 37/51 (72.55%), Query Frame = 1
Query: 13 QVAGALNLSDGAVRLGLDLDFLVLFSSASAVLGLSGEPGYAAANGCLDGLA 165
+VAGA+NL G+DLD VLFSSAS+++G+S + GYAAAN LD +A
Sbjct: 765 KVAGAVNLDTAVTAAGIDLDMFVLFSSASSIVGISPQFGYAAANSVLDMIA 815
BLAST of mRNA_S-dermatodea_contig11444.934.1 vs. uniprot
Match: UPI000840288B (type I polyketide synthase n=1 Tax=Nocardia altamirensis TaxID=472158 RepID=UPI000840288B) HSP 1 Score: 56.2 bits (134), Expect = 9.330e-8 Identity = 27/51 (52.94%), Postives = 38/51 (74.51%), Query Frame = 1
Query: 13 QVAGALNLSDGAVRLGLDLDFLVLFSSASAVLGLSGEPGYAAANGCLDGLA 165
+VAGAL+L + G+DLD VL+SSAS+++G++ + GYAAAN LD LA
Sbjct: 1861 KVAGALHLDNALTAAGIDLDHFVLYSSASSLVGINPQTGYAAANSVLDALA 1911
BLAST of mRNA_S-dermatodea_contig11444.934.1 vs. uniprot
Match: A0A7X6R3V7_9NOCA (Type I polyketide synthase n=18 Tax=Nocardia TaxID=1817 RepID=A0A7X6R3V7_9NOCA) HSP 1 Score: 55.5 bits (132), Expect = 1.750e-7 Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 1
Query: 13 QVAGALNLSDGAVRLGLDLDFLVLFSSASAVLGLSGEPGYAAANGCLDGLA 165
+VAGA+NL G++LD VLFSSAS+++G+S + GYAAAN LD +A
Sbjct: 1856 KVAGAVNLDTAVTAAGIELDMFVLFSSASSIVGISPQFGYAAANSVLDMIA 1906
BLAST of mRNA_S-dermatodea_contig11444.934.1 vs. uniprot
Match: UPI0009FD2CAD (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Nocardia araoensis TaxID=228600 RepID=UPI0009FD2CAD) HSP 1 Score: 54.3 bits (129), Expect = 4.460e-7 Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 1
Query: 13 QVAGALNLSDGAVRLGLDLDFLVLFSSASAVLGLSGEPGYAAANGCLDGLA 165
+VAGA+NL +DLD VLFSSAS+++G+S + GYAAAN LD +A
Sbjct: 1398 KVAGAVNLDTAVTAADIDLDMFVLFSSASSIVGISPQFGYAAANSVLDMIA 1448
BLAST of mRNA_S-dermatodea_contig11444.934.1 vs. uniprot
Match: A0A1Q9LKB4_9PSEU (Carrier domain-containing protein n=1 Tax=Actinokineospora bangkokensis TaxID=1193682 RepID=A0A1Q9LKB4_9PSEU) HSP 1 Score: 54.3 bits (129), Expect = 4.460e-7 Identity = 26/33 (78.79%), Postives = 28/33 (84.85%), Query Frame = 1
Query: 67 LDFLVLFSSASAVLGLSGEPGYAAANGCLDGLA 165
LDFLVLFSSA +LGL G+ YAAANGCLDGLA
Sbjct: 1434 LDFLVLFSSAGPLLGLPGQAAYAAANGCLDGLA 1466
BLAST of mRNA_S-dermatodea_contig11444.934.1 vs. uniprot
Match: A0A7Y5CRZ0_9BACT (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A7Y5CRZ0_9BACT) HSP 1 Score: 54.3 bits (129), Expect = 4.480e-7 Identity = 32/55 (58.18%), Postives = 38/55 (69.09%), Query Frame = 1
Query: 1 FVPLQVAGALNLSDGAVRLGLDLDFLVLFSSASAVLGLSGEPGYAAANGCLDGLA 165
F P +V+GA NL LG+ LDF VLFSS SA+LG +G+ YAAAN LDGLA
Sbjct: 1987 FAP-KVSGAWNLH--TATLGMALDFFVLFSSTSALLGAAGQGNYAAANAFLDGLA 2038 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11444.934.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11444.934.1 >prot_S-dermatodea_contig11444.934.1 ID=prot_S-dermatodea_contig11444.934.1|Name=mRNA_S-dermatodea_contig11444.934.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=57bp FVPLQVAGALNLSDGAVRLGLDLDFLVLFSSASAVLGLSGEPGYAAANGCback to top mRNA from alignment at S-dermatodea_contig11444:1869..2039+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11444.934.1 ID=mRNA_S-dermatodea_contig11444.934.1|Name=mRNA_S-dermatodea_contig11444.934.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=171bp|location=Sequence derived from alignment at S-dermatodea_contig11444:1869..2039+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11444:1869..2039+ >mRNA_S-dermatodea_contig11444.934.1 ID=mRNA_S-dermatodea_contig11444.934.1|Name=mRNA_S-dermatodea_contig11444.934.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=342bp|location=Sequence derived from alignment at S-dermatodea_contig11444:1869..2039+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |