mRNA_S-dermatodea_contig11406.908.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11406.908.1 vs. uniprot
Match: A0A6H5K049_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K049_9PHAE) HSP 1 Score: 112 bits (279), Expect = 3.740e-28 Identity = 62/140 (44.29%), Postives = 83/140 (59.29%), Query Frame = 1
Query: 4 VSIEGSVLDGCGSSGDAVRVILADRGCEVTTNDIN-----------HVENFVEHFQG--NGRRPDWVVTSPPYKNAIVFLKNACRIAKVGVSFKLRLNFLQPVASRAQWLIENPPSTVIVLSRATYRGRMSATVEAWMVW 384
VSI G VLD CG + DAV + L D C+V TND+ +F + F +G++PDW+VTSPPYK A+ F+K A +AK GV+ KL L+FL+P A RA WL NPP+ +++SRA Y+ E W VW
Sbjct: 85 VSISGCVLDMCGGTDDAVAIRLRDT-CQVLTNDVGPRLSPATNLDASSASFTDDFLAAHHGQQPDWIVTSPPYKGALAFVKAALTVAKKGVALKLPLSFLEPCADRAGWLQANPPALCMMMSRARYQPAHVRVGEFWGVW 223
BLAST of mRNA_S-dermatodea_contig11406.908.1 vs. uniprot
Match: A0A6H5JUK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK3_9PHAE) HSP 1 Score: 101 bits (252), Expect = 1.700e-23 Identity = 61/141 (43.26%), Postives = 80/141 (56.74%), Query Frame = 1
Query: 4 VSIEGSVLDGCGSSGDAVRVILADRGCEVTTNDIN-------HVENFVEHFQGN------GRRPDWVVTSPPYKNAIVFLKNACRIAKVGVSFKLRLNFLQPVASRAQWLIENPPSTVIVLSRATYRGRMSATV-EAWMVW 384
V+I G VLD CG DAV CEV TND++ +++ + F+ N G++PDWVVTSPPYK A+ F+K A +A GV+ KL L+FL+P A R WL++NPP+ I L RA Y V E W VW
Sbjct: 143 VAIAGCVLDMCGGPEDAVAQGFRST-CEVLTNDVSSRLSAGTNLDASLLSFRDNFRKANPGKQPDWVVTSPPYKGAVGFVKAALAVATKGVALKLPLSFLEPCADRGGWLVDNPPAVCIFLRRAKYTHAHHVKVGEFWGVW 282
BLAST of mRNA_S-dermatodea_contig11406.908.1 vs. uniprot
Match: D8LSI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI1_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 1.040e-22 Identity = 56/131 (42.75%), Postives = 72/131 (54.96%), Query Frame = 1
Query: 34 CGSSGDAVRVILADRGCEVTTNDINH-----------VENFVEHFQG--NGRRPDWVVTSPPYKNAIVFLKNACRIAKVGVSFKLRLNFLQPVASRAQWLIENPPSTVIVLSRATY-RGRMSATVEAWMVW 384
CG DAV L CE+ TND++ +E F E F +G+RP+WVVTSPPY A+ F+K A +A GV+FK+ + FL+P A R WL NPPS + L RA Y R + T E W VW
Sbjct: 2 CGGPTDAVATRLRST-CEILTNDVSSGRPADTNLNASLELFPEDFLAAYSGKRPEWVVTSPPYSRALTFVKAAMSLATKGVAFKMPIFFLEPCADRGGWLQTNPPSVCVFLRRAKYTRANNAKTGEFWGVW 131
BLAST of mRNA_S-dermatodea_contig11406.908.1 vs. uniprot
Match: D7FJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU4_ECTSI) HSP 1 Score: 89.0 bits (219), Expect = 2.780e-19 Identity = 51/124 (41.13%), Postives = 69/124 (55.65%), Query Frame = 1
Query: 4 VSIEGSVLDGCGSSGDAVRVILADRGCEVTTNDIN----------------HVENFVEHF--QGNGRRPDWVVTSPPYKNAIVFLKNACRIAKVGVSFKLRLNFLQPVASRAQWLIENPPSTVI 321
V +EG VLD CG GDA+ L C+V TNDI+ + +F F G+RPDWV+TSPPYK A+ ++K+A +A GV+ KL L+FL+P A R WL NPP+ +
Sbjct: 97 VELEGCVLDMCGGPGDAIATRLGAT-CKVVTNDISTRLSPGGLPPDTNLDASLASFAVDFLLAKPGQRPDWVLTSPPYKGALEYVKSALSLAAKGVALKLPLSFLEPCADRGGWLQANPPAVCV 219
BLAST of mRNA_S-dermatodea_contig11406.908.1 vs. uniprot
Match: A0A6H5K929_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K929_9PHAE) HSP 1 Score: 84.0 bits (206), Expect = 3.200e-18 Identity = 49/118 (41.53%), Postives = 64/118 (54.24%), Query Frame = 1
Query: 34 CGSSGDAVRVILADRGCEVTTNDINHVENFVEHFQGNGRRPDWVVTSPPYKNAIVFLKNACRIAKVGVSFKLRLNFLQPVASRAQWLIENPPSTVIVLSRATYRGRMSATV-EAWMVW 384
CG DAV + CEV TND++ + G++PDWVVTSPPYK A+ F+K +A GV+ +L L+F +P A R WL++NPP L RA Y V E W VW
Sbjct: 2 CGGPEDAVALGFGGT-CEVLTNDVSSRLSPAHP----GKQPDWVVTSPPYKGAVGFVKAVLAVAAKGVALRLPLSFRKPCADRGSWLVDNPPVMCGFLRRAKYTHAHHVKVGEFWGVW 114
BLAST of mRNA_S-dermatodea_contig11406.908.1 vs. uniprot
Match: A0A6H5K9B9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9B9_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 2.440e-17 Identity = 39/77 (50.65%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 154 PDWVVTSPPYKNAIVFLKNACRIAKVGVSFKLRLNFLQPVASRAQWLIENPPSTVIVLSRATYRGRMSATVEAWMVW 384
PDWVVTSPPYK A+ F+K A +AK V+ KL L+FL+P A R WL NPP+ +++SRA Y+ E W VW
Sbjct: 57 PDWVVTSPPYKGALGFVKAALTVAKESVALKLPLSFLEPCADREGWLQANPPALCMMMSRARYQPAHVRVGEFWGVW 133
BLAST of mRNA_S-dermatodea_contig11406.908.1 vs. uniprot
Match: A0A6H5KU02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU02_9PHAE) HSP 1 Score: 84.0 bits (206), Expect = 4.270e-17 Identity = 43/94 (45.74%), Postives = 58/94 (61.70%), Query Frame = 1
Query: 112 VENFVEHFQG--NGRRPDWVVTSPPYKNAIVFLKNACRIAKVGVSFKLRLNFLQPVASRAQWLIENPPSTVIVLSRATYRGRMSATV-EAWMVW 384
+E+F E F +G+RP+WVVTSPPY A+ F+K A +A GV FK+ ++ L+P A R WL NPPS + L RA Y +A + E W VW
Sbjct: 145 LESFPEDFLAAYSGKRPEWVVTSPPYSRALTFVKAAMSLATKGVEFKMPISCLEPCADRGGWLQTNPPSVCLFLRRAKYTRANNAKMGEFWGVW 238
BLAST of mRNA_S-dermatodea_contig11406.908.1 vs. uniprot
Match: D7G7B0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7B0_ECTSI) HSP 1 Score: 72.4 bits (176), Expect = 4.470e-14 Identity = 41/100 (41.00%), Postives = 56/100 (56.00%), Query Frame = 1
Query: 34 CGSSGDAVRVILADRGCEVTTNDINH-----------VENFVEHFQG--NGRRPDWVVTSPPYKNAIVFLKNACRIAKVGVSFKLRLNFLQPVASRAQWL 294
CG DAV L CE+ TND++ +E F E+F +G+RP+WVV SPPY A+ F+K A +A GV+FK+ + FL+P A R WL
Sbjct: 2 CGGPTDAVATRLRST-CEILTNDVSSGRPADTNLDASLELFPENFLAAYSGKRPEWVVISPPYSRALTFVKAAMSLATKGVAFKMPIFFLEPCADRGGWL 100
BLAST of mRNA_S-dermatodea_contig11406.908.1 vs. uniprot
Match: A0A6H5K2D0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2D0_9PHAE) HSP 1 Score: 58.9 bits (141), Expect = 1.510e-8 Identity = 42/127 (33.07%), Postives = 57/127 (44.88%), Query Frame = 1
Query: 34 CGSSGDAVRVILADRGCEVTTNDINH-----------VENFVEHFQG--NGRRPDWVVTSPPYKNAIVFLKNACRIAKVGVSFKLRLNFLQPVASRAQWLIENPPSTVIVLSRATYRGRMSATVEAW 375
CG DAV L CE+ T D++ +E+F E F +G+RP+WVVTSPPY A+ F+K A R G+ +F R WL N P + +S T R T+ W
Sbjct: 2 CGGPTDAVATRLRS-ACEIRTKDVSSGRPADTNLDASLESFPEDFLAAYSGKRPEWVVTSPPYSRALTFVKAAMR----GIQ---NAHFFTATLRRPGWLTANEPPVCVFVS--TQRKTRMRTMRRW 118
BLAST of mRNA_S-dermatodea_contig11406.908.1 vs. uniprot
Match: A0A6H5L1N5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1N5_9PHAE) HSP 1 Score: 58.9 bits (141), Expect = 3.870e-8 Identity = 34/90 (37.78%), Postives = 48/90 (53.33%), Query Frame = 1
Query: 4 VSIEGSVLDGCGSSGDAVRVILADRGCEVTTNDINHVENFVEHFQGNGRRPDWVVTSPPYKNAIVFLKNACRIAKVGVSFKLRLNFLQPV 273
V+I G VLD CG DAV + + + + F++ G++PDWVVTSPPYK ++ F+ A +A GV+ KL L PV
Sbjct: 62 VAITGCVLDMCGGPEDAVAQGFGGTCTNLDASLVYFPDEFIK--DNPGKKPDWVVTSPPYKGSVGFVHAALAVATKGVALKLSLYSWNPV 149 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11406.908.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11406.908.1 >prot_S-dermatodea_contig11406.908.1 ID=prot_S-dermatodea_contig11406.908.1|Name=mRNA_S-dermatodea_contig11406.908.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=129bp HVSIEGSVLDGCGSSGDAVRVILADRGCEVTTNDINHVENFVEHFQGNGRback to top mRNA from alignment at S-dermatodea_contig11406:3126..3919- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11406.908.1 ID=mRNA_S-dermatodea_contig11406.908.1|Name=mRNA_S-dermatodea_contig11406.908.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=794bp|location=Sequence derived from alignment at S-dermatodea_contig11406:3126..3919- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11406:3126..3919- >mRNA_S-dermatodea_contig11406.908.1 ID=mRNA_S-dermatodea_contig11406.908.1|Name=mRNA_S-dermatodea_contig11406.908.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=774bp|location=Sequence derived from alignment at S-dermatodea_contig11406:3126..3919- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |