mRNA_S-dermatodea_contig11379.891.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11379.891.1
Unique NamemRNA_S-dermatodea_contig11379.891.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig11379.891.1 vs. uniprot
Match: A0A6H5K1M2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1M2_9PHAE)

HSP 1 Score: 424 bits (1089), Expect = 6.940e-137
Identity = 366/676 (54.14%), Postives = 397/676 (58.73%), Query Frame = 1
Query:    1 MPRVRKQVARFDPSPEAVAPWNDTSRKVRIQIDLQARARHGLSXXXXXXXXXXXXXXXXXXXXQNTNPAPVASSNRK-------------PSV-----------------PAPGRKRQRA---STVGGAVGAGASXXXXXXXXYETPTWPPMSDLRTGXXXXXXXXXXXXXXXXXXXXXXXGVRLGSFITDSSLSCSTSGSDSDSSYSCASYCSDLIAPQGSAASATSDGCSSCLAAPLDAAAGGGCADCGGXXXXXXXXXXXXXXXXXXEAAPQGKTRAREENDDADERERVEKRRNVVTVRLARSQMPQRWATPSPPFKTCLDDVRPEDRLGGGMRDGXXXXXXXXXXXXXSMLGLSEEEGVDSKNWLYSGLIDVVMAKLARTYPNVHFMPIDFAVLCLNGWGSEAAAVPPSSAYPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALRDQNMVFQDILGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHNPVPELQLFEPMGKPPRRQGGSRTNSGAA-------APSASRGTGFRCIPKEVYRWLDTVWPLGSEDGARGGSASASSSVSGSKRKVTSQTPCPDGWASHAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQGDMTEHRRALQRYFKEVV 1908
            MPR RK+VARFDPSPEAVA WNDTS K R+ +DLQAR R GLS      XXXXXXXXXXXXXX            R+             P+V                 PA GR+  RA   +TVGG   +  +        ++   W P     T       XXXXXXXXXXXXXXXXX    G+  TDS                   YCSDL    GSA+   S         PL      G  +C    XXXXXXXXXXXXXXXX                           NVVTV+LARSQMP RWA P PPFKTCL DVRP D+LGG  R   XXXXXXXXXXXXSMLGL E + VD+KNWL SG IDVVMAK ARTY NVHFMPIDFAVLCLNGWG  A+  PP +A  S        XXXXXXXXX                                    A L DQ+MVF+D+LGRPIVY+EKRPVIFLTHVNNVHWNLLRVEH+PVPELQLFEPMGKPPRRQG                AP   R TGFRCIPKEVYRWLD VWPL S    RGGS S+ S   GSKRK  S TP  +GWAS AYSAITRQQQTTGFDCGVASLLYAEKCGQGQMRED+DAWTTQ DMTE+RRALQRY +EV+
Sbjct:    1 MPRSRKKVARFDPSPEAVASWNDTSLKTRVVVDLQARVRLGLSSPEGAAXXXXXXXXXXXXXXXXXXXXXXXXLARRXXXXXXXXXXXXSPAVGRGGASASGRGRQQQEEPASGRRPSRACARATVGGVPPSSTTAT------HQRLAWQPPQSGATAAGRGDGXXXXXXXXXXXXXXXXXXXXNGASDTDSE------------------YCSDLA---GSASPPLS---------PL------GFDECPPIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXNVVTVKLARSQMPSRWAAPPPPFKTCLRDVRPADKLGG--RACGXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWG--ASDTPPPAAAASGGDAMGSEXXXXXXXXXAATAAN------------------------------ADLADQSMVFKDVLGRPIVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGG-RSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSG--GSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDIDAWTTQADMTEYRRALQRYVEEVL 592          
BLAST of mRNA_S-dermatodea_contig11379.891.1 vs. uniprot
Match: D8LIB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB2_ECTSI)

HSP 1 Score: 415 bits (1067), Expect = 1.470e-133
Identity = 284/386 (73.58%), Postives = 301/386 (77.98%), Query Frame = 1
Query:  793 NVVTVRLARSQMPQRWATPSPPFKTCLDDVRPEDRLGG---GMRDGXXXXXXXXXXXXXSMLGLSEEEGVDSKNWLYSGLIDVVMAKLARTYPNVHFMPIDFAVLCLNGWGSEAAAVPPSSAYPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALRDQNMVFQDILGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHNPVPELQLFEPMGKPPRRQGGSRTNSGAA-------APSASRGTGFRCIPKEVYRWLDTVWPLGSEDGARGGSASASSSVSGSKRKVTSQTPCPDGWASHAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQGDMTEHRRALQRYFKEVVGQTD 1920
            NVVTV+LARSQMP RWA P PPF+TCL DVRP D+LGG   G R   XXXXXXXXXXXXSMLGL E + VD+KNWL SG IDVVMAK ARTY NVHFMPIDFAVLCLNGWG+                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AAL DQ+MVF+D+LGRPIVY+EKRPVIFLTHVNNVHWNLLRVEH+PVPELQLFEPMGKPPRRQG                AP   R TGFRCIPKEVYRWLD VWPL S    RGGS S+ S   GSKRK  S TP  +GWAS AYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQ DMTE+RRALQRY +EV+ Q +
Sbjct:  233 NVVTVKLARSQMPSRWAAPPPPFETCLRDVRPADKLGGRASGGRACGXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGAPDTPX----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAANAALADQSMVFKDVLGRPIVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGG-RSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSG--GSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYVEEVLRQEE 599          
BLAST of mRNA_S-dermatodea_contig11379.891.1 vs. uniprot
Match: A0A7S2SPQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPQ6_9STRA)

HSP 1 Score: 190 bits (482), Expect = 2.830e-51
Identity = 129/372 (34.68%), Postives = 163/372 (43.82%), Query Frame = 1
Query:  796 VVTVRLARSQMPQRWATPSPPFKTCLDDVRPEDRLGGGMRDGXXXXXXXXXXXXXSMLGLSEEEGVDSKNWLYSGLIDVVMAKLARTYPNVHFMPIDFAVLCLNGWGSEAAAVPPSSAYPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALRDQNMVFQ--DILGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHNPVPELQLFEPMGKPPRRQGGSRTNSGAAAPSASRGTGFRCIPKEVYRWLDTVWPLGSEDGARGGSASASSSVSGSKRKVTSQTPCPDGWASHAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQGDMTEHRRALQRYFKEV 1905
            VVTVRLAR +MP RW  P PPF + L+ V       G +                    LS +E V  ++WL S  ID+V+++ AR YPNVHFMP++FA   L                                                                         ++  +M FQ  DILG+ I Y  ++PV+FL ++ N+HWNL RV+H P+ ELQLFEPMGKP  R G S                 R IPK +  WLDTVWPLGSE                            + W   + SAIT Q Q TGFDCGVA +LYAEKC QG M+ED+D  T Q D T+ R+ LQR   E+
Sbjct:   70 VVTVRLARCKMPYRWREPLPPFVSILNHV-------GALHLDSDARRLDHATVTVLRRALSSDE-VQDESWLSSSFIDLVLSRYARRYPNVHFMPVEFAAFRLK-----------------------------------------------------------------------TMQTVDM-FQATDILGQRIDYNMRKPVVFLANIANMHWNLFRVQHWPLKELQLFEPMGKPATRHGVS----------------LRYIPKHIIHWLDTVWPLGSE---------------------------AESWLFRSCSAITTQHQLTGFDCGVACILYAEKCAQGLMKEDIDDSTKQSDFTQFRQDLQRRLSEL 318          
BLAST of mRNA_S-dermatodea_contig11379.891.1 vs. uniprot
Match: A0A836CDU6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDU6_9STRA)

HSP 1 Score: 186 bits (471), Expect = 1.140e-49
Identity = 97/189 (51.32%), Postives = 123/189 (65.08%), Query Frame = 1
Query: 1351 DILGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHNPVPELQLFEPMGKPPRRQGGSRTNSGAAAPSASRGTGFRCIPKEVYRWLDTVWPLGSEDGARGGSASASSSVSGSKRKVTSQTPCPDGWASHAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQGDMTEHRRALQRYFKEVVGQT 1917
            DILG+ I YA ++P+IFL +V N+HWNLLRV+H PVPELQLFEP+GKP +R  G+ +         S G  +R IPK+V+ WLDT+        ARGG                       GWA+ + SAITRQQQTTGFDCGVASLLYAEKCGQ QMRED+DA TTQ D+T +R+ LQ++ + +  Q+
Sbjct:   99 DILGQTIDYAARKPIIFLANVKNLHWNLLRVQHFPVPELQLFEPLGKPAKRAHGAHS---------SEGVSYRYIPKDVFVWLDTMC-------ARGG-----------------------GWATRSVSAITRQQQTTGFDCGVASLLYAEKCGQDQMREDIDAATTQDDITAYRQVLQKFLRSLAAQS 248          
BLAST of mRNA_S-dermatodea_contig11379.891.1 vs. uniprot
Match: A0A7S2SPU9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPU9_9STRA)

HSP 1 Score: 154 bits (388), Expect = 4.410e-40
Identity = 83/184 (45.11%), Postives = 101/184 (54.89%), Query Frame = 1
Query: 1354 ILGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHNPVPELQLFEPMGKPPRRQGGSRTNSGAAAPSASRGTGFRCIPKEVYRWLDTVWPLGSEDGARGGSASASSSVSGSKRKVTSQTPCPDGWASHAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQGDMTEHRRALQRYFKEV 1905
            ILG+ I Y  ++PV+FL ++ N+HWNL RV+H P+ ELQLFEPMGKP  R G S                 R IPK +  WLDTVWPLGSE                            + W   + SAIT Q Q TGFDCGVA +LYAEKC QG M+ED+D  T Q D T+ R+ LQR   E+
Sbjct:    5 ILGQRIDYNMRKPVVFLANIANMHWNLFRVQHWPLKELQLFEPMGKPATRHGVS----------------LRYIPKHIIHWLDTVWPLGSE---------------------------AESWLFRSCSAITTQHQLTGFDCGVACILYAEKCAQGLMKEDIDDSTKQSDFTQFRQDLQRRLSEL 145          
BLAST of mRNA_S-dermatodea_contig11379.891.1 vs. uniprot
Match: A0A7S2GCQ8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GCQ8_9STRA)

HSP 1 Score: 144 bits (362), Expect = 3.150e-34
Identity = 80/185 (43.24%), Postives = 101/185 (54.59%), Query Frame = 1
Query: 1351 DILGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHNPVPELQLFEPMGKPPRRQGGSRTNSGAAAPSASRGTGFRCIPKEVYRWLDTVWPLGSEDGARGGSASASSSVSGSKRKVTSQTPCPDGWASHAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQGDMTEHRRALQRYFKEV 1905
            D++G+ I Y   +PVIF  ++ N+HWN+LRV+H P+ ELQLFEPMGKP  R G S                +R IP+ +  WLDT WPL  ++G    S   S                   W   A SAIT Q Q   FDCGVA LLYAEKC QG M+ED+ A T Q D+TE R+ LQR  + +
Sbjct:  183 DLVGKKIDYNIPKPVIFFANIANMHWNVLRVQHWPLKELQLFEPMGKPASRNGVS----------------YRNIPQHIIHWLDTCWPL--DEGHPKDSGGRS-------------------WIVQACSAITTQHQVNSFDCGVACLLYAEKCAQGMMKEDIHATTNQRDITEFRQCLQRCLRSL 330          
BLAST of mRNA_S-dermatodea_contig11379.891.1 vs. uniprot
Match: A0A5D6Y3L5_9STRA (ULP_PROTEASE domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3L5_9STRA)

HSP 1 Score: 140 bits (353), Expect = 8.440e-34
Identity = 95/310 (30.65%), Postives = 131/310 (42.26%), Query Frame = 1
Query:  976 SEEEGVDSKNWLYSGLIDVVMAKLARTYPNVHFMPIDFAVLCLNGWGSEAAAVPPSSAYPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALRDQNMVFQDILGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHNPVPELQLFEPMGKPPRRQGGSRTNSGAAAPSASRGTGFRCIPKEVYRWLDTVWPLGSEDGARGGSASASSSVSGSKRKVTSQTPCPDGWASHAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQGDMTEHRRALQRYFKEV 1905
            SE++ +D  +WL S L+D+++ +LA  YP VHF+P DF    L G  S + +       PS                                                         D +   +D+LGR + Y   RP++F  +   +HWNL RV+  P PELQLFEPMG+P                S+  G   R +P+ V  WL+  +P                           Q P    W S A SAIT  QQ +GFDCGVA LLYA+KCGQGQ R+++DA T Q  +T  R  LQ+  + +
Sbjct:   53 SEDDSIDDTSWLTSTLMDLMLWRLAGQYPGVHFLPTDFFHCVLEG-RSRSRSQHGRKRGPS---------------------------------------------------------DCDFRVRDVLGRLVDYGSNRPLLFAVNCGRIHWNLFRVQLTPQPELQLFEPMGRP----------------SSRSGLSHRYVPRSVVEWLEACYP---------------------------QHP---SWISRAVSAITAPQQVSGFDCGVACLLYADKCGQGQTRQEIDARTDQLAITGFRATLQQQLQAM 258          
BLAST of mRNA_S-dermatodea_contig11379.891.1 vs. uniprot
Match: A0A7S1C2Y9_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2Y9_9STRA)

HSP 1 Score: 132 bits (332), Expect = 3.150e-32
Identity = 76/186 (40.86%), Postives = 97/186 (52.15%), Query Frame = 1
Query: 1360 GRPIVYA---EKRPVIFLTHVNNVHWNLLRVEHNPVPELQLFEPMGKPPRRQGGSRTNSGAAAPSASRGTGFRCIPKEVYRWLDTVWPLGSEDGARGGSASASSSVSGSKRKVTSQTPCPDGWASHAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQGDMTEHRRALQRYFKEVV 1908
            G P++ A   E RP++F  +V N+HWNLLRV     PEL+++EPMG+P  RQ     ++             R +P+ V  WLD V  LG   G+                           W S A SAIT + Q TGFDCGVA LLYAEKC Q Q REDV+AWT Q D+T  RR LQ +F+ + 
Sbjct:   18 GEPLLPATAEESRPLLFFWNVGNMHWNLLRVLRGRRPELEIYEPMGRPVSRQRDGVLSA-------------RSLPRCVVTWLDAVCSLGEGGGS---------------------------WGSRALSAITIKHQVTGFDCGVACLLYAEKCAQRQAREDVEAWTDQADITAFRRTLQDFFETIA 163          
BLAST of mRNA_S-dermatodea_contig11379.891.1 vs. uniprot
Match: A0A662YFQ0_9STRA (ULP_PROTEASE domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFQ0_9STRA)

HSP 1 Score: 127 bits (320), Expect = 7.440e-29
Identity = 89/303 (29.37%), Postives = 124/303 (40.92%), Query Frame = 1
Query:  982 EEGVDSKNWLYSGLIDVVMAKLARTYPNVHFMPIDFAVLCLNGWGSEAAAVPPSSAYPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALRDQNMVFQDILGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHNPVPELQLFEPMGKPPRRQGGSRTNSGAAAPSASRGTGFRCIPKEVYRWLDTVWPLGSEDGARGGSASASSSVSGSKRKVTSQTPCPDGWASHAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQGDMTEHRRALQR 1890
            E+ +D  +WL   LID+++ K A  YP VHF+P  F    L    +       SS  P                                                         RD  +  +D+LGR + Y    P++F+ +V  +HWNL RV+  P P LQLFEPMG+       SRT           G  +R +P+ V  WL+T +P  +                              GW +   SAIT +QQ +GFDCGVA LLYA+KCG+GQ  E+++A   Q  +T  R+ LQR
Sbjct:   97 EDRIDETSWLTGTLIDLMLWKFANLYPTVHFLPTAFFHFHLEATNA-------SSGVP---------------------------------------------WRRRRRRPKRLKRDYQV--RDVLGRVVDYDSDTPLVFIVNVGQIHWNLFRVQLQPTPRLQLFEPMGRL-----ASRT-----------GISYRSVPRSVIEWLETCYPQHT------------------------------GWLARTVSAITHKQQVSGFDCGVACLLYADKCGRGQSGEEINAQIDQQAITSFRKQLQR 299          
BLAST of mRNA_S-dermatodea_contig11379.891.1 vs. uniprot
Match: A0A2D4BLN7_PYTIN (WD repeat-containing protein srw1 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BLN7_PYTIN)

HSP 1 Score: 133 bits (334), Expect = 8.890e-29
Identity = 73/186 (39.25%), Postives = 97/186 (52.15%), Query Frame = 1
Query: 1351 DILGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHNPVPELQLFEPMGKPPRRQGGSRTNSGAAAPSASRGTGFRCIPKEVYRWLDTVWPLGSEDGARGGSASASSSVSGSKRKVTSQTPCPDGWASHAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQGDMTEHRRALQRYFKEVV 1908
            D+LGR + +A+ RP+IF+ +V  +HWNLLRV+ +PV ELQLFEPMG+   R                RG  FR IP+ V +WLD  +P                                  W     SAIT QQQ +G DCGVA LLYA+KC QGQ RE+++A   Q  ++  RR LQR  ++V+
Sbjct:   75 DVLGRAVEFADARPMIFVVNVGLIHWNLLRVQLHPVAELQLFEPMGRLASR----------------RGISFRSIPRSVIQWLDVCFPQ------------------------------QQSWLRRTVSAITTQQQLSGVDCGVACLLYADKCAQGQHREEINATVDQPAISSFRRRLQRELRDVI 214          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11379.891.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1M2_9PHAE6.940e-13754.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIB2_ECTSI1.470e-13373.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2SPQ6_9STRA2.830e-5134.68Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A836CDU6_9STRA1.140e-4951.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SPU9_9STRA4.410e-4045.11Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2GCQ8_9STRA3.150e-3443.24Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A5D6Y3L5_9STRA8.440e-3430.65ULP_PROTEASE domain-containing protein n=1 Tax=Pyt... [more]
A0A7S1C2Y9_9STRA3.150e-3240.86Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A662YFQ0_9STRA7.440e-2929.37ULP_PROTEASE domain-containing protein n=2 Tax=Not... [more]
A0A2D4BLN7_PYTIN8.890e-2939.25WD repeat-containing protein srw1 n=1 Tax=Pythium ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11379contigS-dermatodea_contig11379:4181..6361 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score422.5
Seed ortholog evalue3.4e-115
Seed eggNOG ortholog2880.D8LIB2
EggNOG OGs2DSZD@1,2S6H1@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-24_001490.1
Exons3
Model size1920
Cds size1920
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11379.891.1prot_S-dermatodea_contig11379.891.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11379 4181..6361 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924200.3978374-CDS-S-dermatodea_contig11379:4180..47141622924200.3978374-CDS-S-dermatodea_contig11379:4180..4714Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11379 4181..4714 +
1694079087.747741-CDS-S-dermatodea_contig11379:4180..47141694079087.747741-CDS-S-dermatodea_contig11379:4180..4714Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11379 4181..4714 +
1622924200.416108-CDS-S-dermatodea_contig11379:4900..60021622924200.416108-CDS-S-dermatodea_contig11379:4900..6002Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11379 4901..6002 +
1694079087.7579043-CDS-S-dermatodea_contig11379:4900..60021694079087.7579043-CDS-S-dermatodea_contig11379:4900..6002Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11379 4901..6002 +
1622924200.4271467-CDS-S-dermatodea_contig11379:6077..63611622924200.4271467-CDS-S-dermatodea_contig11379:6077..6361Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11379 6078..6361 +
1694079087.766307-CDS-S-dermatodea_contig11379:6077..63611694079087.766307-CDS-S-dermatodea_contig11379:6077..6361Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11379 6078..6361 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11379.891.1

>prot_S-dermatodea_contig11379.891.1 ID=prot_S-dermatodea_contig11379.891.1|Name=mRNA_S-dermatodea_contig11379.891.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=640bp
MPRVRKQVARFDPSPEAVAPWNDTSRKVRIQIDLQARARHGLSSAEAAAL
AAATAPTASAAGEQNTNPAPVASSNRKPSVPAPGRKRQRASTVGGAVGAG
ASSTAAAPPPYETPTWPPMSDLRTGGGGEGGGGGGVGSMAAATAAAGGGV
RLGSFITDSSLSCSTSGSDSDSSYSCASYCSDLIAPQGSAASATSDGCSS
CLAAPLDAAAGGGCADCGGGGGGCAAGAGVGVGAVAGEAAPQGKTRAREE
NDDADERERVEKRRNVVTVRLARSQMPQRWATPSPPFKTCLDDVRPEDRL
GGGMRDGGGDDAAAAAAAAASMLGLSEEEGVDSKNWLYSGLIDVVMAKLA
RTYPNVHFMPIDFAVLCLNGWGSEAAAVPPSSAYPSPSSASSSSSSSSSS
SVSTAGSEDGDGGGLGVGVSDVGAAAEASSAASAAEAEAAALRDQNMVFQ
DILGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHNPVPELQLFEPMGKPPR
RQGGSRTNSGAAAPSASRGTGFRCIPKEVYRWLDTVWPLGSEDGARGGSA
SASSSVSGSKRKVTSQTPCPDGWASHAYSAITRQQQTTGFDCGVASLLYA
EKCGQGQMREDVDAWTTQGDMTEHRRALQRYFKEVVGQTD
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mRNA from alignment at S-dermatodea_contig11379:4181..6361+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11379.891.1 ID=mRNA_S-dermatodea_contig11379.891.1|Name=mRNA_S-dermatodea_contig11379.891.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2181bp|location=Sequence derived from alignment at S-dermatodea_contig11379:4181..6361+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCCGCGCGTCCGCAAACAAGTCGCGCGCTTCGACCCCTCCCCGGAGGC AGTCGCCCCTTGGAACGACACCTCCCGCAAGGTCAGGATCCAGATCGATC TCCAGGCGCGGGCCCGGCATGGGCTCAGCTCTGCCGAGGCTGCGGCCCTA GCCGCGGCGACTGCCCCCACCGCCTCCGCGGCAGGAGAACAAAACACCAA CCCCGCCCCCGTCGCCTCCTCGAACCGCAAACCGAGCGTGCCGGCGCCGG GTAGAAAGCGCCAGAGAGCATCCACCGTGGGGGGAGCAGTGGGAGCGGGG GCGTCATCGACGGCGGCGGCGCCTCCGCCGTACGAAACCCCAACCTGGCC GCCCATGTCCGACCTGCGCACGGGCGGCGGGGGGGAAGGGGGAGGGGGGG GGGGAGTAGGGAGCATGGCCGCCGCCACTGCCGCAGCGGGCGGAGGGGTG CGCCTGGGATCCTTCATCACCGACAGTAGCCTCAGCTGCAGCACGAGCGG AAGCGACAGCGACTCCTCCTATTCGTGCGCGTCGGTGATGTCCGACCAGA ACATTCCGTGGAGGAGGCGTGTTCCGCCGGCGGCCGGAGGTAGCGCCGCG GACGCCGACGCGGCGGGTGGGGGAGCGGGGGCCGGGGAGGCGGGGGCTGG AGGCGGGGAGGGGGTGGGGGCGGGCCCTTGCGCGACCGCGTCGGTCAGCG GAACGGACACGGACAGCGAGTACTGCAGCGATCTCATCGCGCCTCAGGGT TCCGCGGCCAGCGCCACGTCTGATGGGTGCTCTTCGTGCCTGGCCGCGCC GCTCGATGCCGCCGCCGGGGGGGGTTGCGCGGACTGCGGCGGCGGTGGTG GCGGCTGCGCGGCGGGAGCTGGGGTTGGGGTTGGGGCCGTGGCCGGGGAA GCGGCGCCGCAGGGCAAGACTCGCGCGCGGGAAGAAAACGACGACGCGGA CGAGCGCGAGCGGGTCGAGAAGCGCCGGAACGTCGTGACCGTGCGCCTGG CGAGATCCCAGATGCCGCAGCGGTGGGCGACGCCTTCGCCGCCGTTCAAG ACTTGCCTCGACGATGTCCGCCCGGAGGATAGGCTGGGGGGAGGAATGCG GGACGGCGGGGGTGACGACGCCGCGGCGGCTGCCGCCGCGGCCGCGAGCA TGCTCGGGCTCAGCGAGGAGGAGGGCGTGGACTCGAAGAACTGGCTGTAC TCCGGGCTGATCGACGTTGTGATGGCGAAGCTCGCGCGGACTTACCCGAA CGTCCACTTCATGCCGATCGACTTCGCGGTGCTGTGCCTGAACGGGTGGG GCTCGGAAGCCGCAGCGGTTCCCCCCTCCTCGGCGTATCCTTCCCCTTCC TCGGCATCCTCGTCCTCCTCCTCCTCCTCCTCCTCCTCTGTGTCGACGGC CGGCAGCGAAGATGGTGACGGTGGTGGCCTCGGTGTAGGCGTGTCTGACG TTGGCGCCGCGGCCGAAGCATCATCAGCGGCATCGGCAGCAGAAGCAGAA GCTGCCGCGCTCCGGGATCAGAACATGGTTTTCCAGGACATCCTTGGGCG ACCGATCGTGTACGCGGAGAAGAGACCGGTTATCTTCCTCACCCACGTGA ACAACGTCCACTGGAACCTCCTGCGCGTGGAGCACAACCCGGTCCCCGAG CTCCAGCTGTTCGAGCCGATGGGCAAACCGCCGCGGCGGCAGGGCGGGTC CCGAACCAACTCCGGGGCGGCCGCGCCGAGCGCCTCCCGCGGCACCGGGT TCCGGTGCATCCCGAAGGAGGTGTACCGGTGGCTAGACACGGTTTGGCCG CTGGGCTCTGAAGACGGCGCCAGTGGAGACGCATCTGTCTCCCCTTCGTC ATCGTCCTCCTCCTCCAACGCCGCCGCGTCTTCCGCTGGAAATGCAGGGG GCGGGAGCGCGAGCGCGAGCAGCAGCGTGTCCGGGTCTAAGAGGAAAGTG ACGAGCCAGACGCCTTGCCCCGACGGTTGGGCCTCGCACGCGTACTCGGC CATCACACGGCAGCAACAGACGACCGGCTTCGACTGCGGCGTTGCCTCGC TGCTGTACGCGGAGAAGTGCGGGCAGGGACAGATGCGCGAGGACGTCGAC GCGTGGACTACCCAAGGGGACATGACCGAGCACCGGCGAGCGCTGCAGCG GTACTTCAAGGAGGTTGTCGGCCAGACCGAT
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Coding sequence (CDS) from alignment at S-dermatodea_contig11379:4181..6361+

>mRNA_S-dermatodea_contig11379.891.1 ID=mRNA_S-dermatodea_contig11379.891.1|Name=mRNA_S-dermatodea_contig11379.891.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3840bp|location=Sequence derived from alignment at S-dermatodea_contig11379:4181..6361+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCCGCGCGTCCGCAAACAAGTCGCGCGCTTCGACCCCTCCCCGGAGGC
AGTCGCCCCTTGGAACGACACCTCCCGCAAGGTCAGGATCCAGATCGATC
TCCAGGCGCGGGCCCGGCATGGGCTCAGCTCTGCCGAGGCTGCGGCCCTA
GCCGCGGCGACTGCCCCCACCGCCTCCGCGGCAGGAGAACAAAACACCAA
CCCCGCCCCCGTCGCCTCCTCGAACCGCAAACCGAGCGTGCCGGCGCCGG
GTAGAAAGCGCCAGAGAGCATCCACCGTGGGGGGAGCAGTGGGAGCGGGG
GCGTCATCGACGGCGGCGGCGCCTCCGCCGTACGAAACCCCAACCTGGCC
GCCCATGTCCGACCTGCGCACGGGCGGCGGGGGGGAAGGGGGAGGGGGGG
GGGGAGTAGGGAGCATGGCCGCCGCCACTGCCGCAGCGGGCGGAGGGGTG
CGCCTGGGATCCTTCATCACCGACAGTAGCCTCAGCTGCAGCACGAGCGG
AAGCGACAGCGACTCCTCCTATTCGTGCGCGTCGATGCCGCGCGTCCGCA
AACAAGTCGCGCGCTTCGACCCCTCCCCGGAGGCAGTCGCCCCTTGGAAC
GACACCTCCCGCAAGGTCAGGATCCAGATCGATCTCCAGGCGCGGGCCCG
GCATGGGCTCAGCTCTGCCGAGGCTGCGGCCCTAGCCGCGGCGACTGCCC
CCACCGCCTCCGCGGCAGGAGAACAAAACACCAACCCCGCCCCCGTCGCC
TCCTCGAACCGCAAACCGAGCGTGCCGGCGCCGGGTAGAAAGCGCCAGAG
AGCATCCACCGTGGGGGGAGCAGTGGGAGCGGGGGCGTCATCGACGGCGG
CGGCGCCTCCGCCGTACGAAACCCCAACCTGGCCGCCCATGTCCGACCTG
CGCACGGGCGGCGGGGGGGAAGGGGGAGGGGGGGGGGGAGTAGGGAGCAT
GGCCGCCGCCACTGCCGCAGCGGGCGGAGGGGTGCGCCTGGGATCCTTCA
TCACCGACAGTAGCCTCAGCTGCAGCACGAGCGGAAGCGACAGCGACTCC
TCCTATTCGTGCGCGTCGTACTGCAGCGATCTCATCGCGCCTCAGGGTTC
CGCGGCCAGCGCCACGTCTGATGGGTGCTCTTCGTGCCTGGCCGCGCCGC
TCGATGCCGCCGCCGGGGGGGGTTGCGCGGACTGCGGCGGCGGTGGTGGC
GGCTGCGCGGCGGGAGCTGGGGTTGGGGTTGGGGCCGTGGCCGGGGAAGC
GGCGCCGCAGGGCAAGACTCGCGCGCGGGAAGAAAACGACGACGCGGACG
AGCGCGAGCGGGTCGAGAAGCGCCGGAACGTCGTGACCGTGCGCCTGGCG
AGATCCCAGATGCCGCAGCGGTGGGCGACGCCTTCGCCGCCGTTCAAGAC
TTGCCTCGACGATGTCCGCCCGGAGGATAGGCTGGGGGGAGGAATGCGGG
ACGGCGGGGGTGACGACGCCGCGGCGGCTGCCGCCGCGGCCGCGAGCATG
CTCGGGCTCAGCGAGGAGGAGGGCGTGGACTCGAAGAACTGGCTGTACTC
CGGGCTGATCGACGTTGTGATGGCGAAGCTCGCGCGGACTTACCCGAACG
TCCACTTCATGCCGATCGACTTCGCGGTGCTGTGCCTGAACGGGTGGGGC
TCGGAAGCCGCAGCGGTTCCCCCCTCCTCGGCGTATCCTTCCCCTTCCTC
GGCATCCTCGTCCTCCTCCTCCTCCTCCTCCTCCTCTGTGTCGACGGCCG
GCAGCGAAGATGGTGACGGTGGTGGCCTCGGTGTAGGCGTGTCTGACGTT
GGCGCCGCGGCCGAAGCATCATCAGCGGCATCGGCAGCAGAAGCAGAAGC
TGCCGCGCTCCGGGATCAGAACATGGTTTTCCAGGACATCCTTGGGCGAC
CGATCGTGTACGCGGAGAAGAGACCGGTTATCTTCCTCACCCACGTGAAC
AACGTCCACTGGAACCTCCTGCGCGTGGAGCACAACCCGGTCCCCGAGCT
CCAGCTGTTCGAGCCGATGGGCAAACCGCCGCGGCGGCAGGGCGGGTCCC
GAACCAACTCCGGGGCGGCCGCGCCGAGCGCCTCCCGCGGCACCGGGTTC
CGGTGCATCCCGAAGGAGGTGTACCGGTGGCTAGACACGGTTTGGCCGCT
GGGCTCTGAAGACGGCGCCATACTGCAGCGATCTCATCGCGCCTCAGGGT
TCCGCGGCCAGCGCCACGTCTGATGGGTGCTCTTCGTGCCTGGCCGCGCC
GCTCGATGCCGCCGCCGGGGGGGGTTGCGCGGACTGCGGCGGCGGTGGTG
GCGGCTGCGCGGCGGGAGCTGGGGTTGGGGTTGGGGCCGTGGCCGGGGAA
GCGGCGCCGCAGGGCAAGACTCGCGCGCGGGAAGAAAACGACGACGCGGA
CGAGCGCGAGCGGGTCGAGAAGCGCCGGAACGTCGTGACCGTGCGCCTGG
CGAGATCCCAGATGCCGCAGCGGTGGGCGACGCCTTCGCCGCCGTTCAAG
ACTTGCCTCGACGATGTCCGCCCGGAGGATAGGCTGGGGGGAGGAATGCG
GGACGGCGGGGGTGACGACGCCGCGGCGGCTGCCGCCGCGGCCGCGAGCA
TGCTCGGGCTCAGCGAGGAGGAGGGCGTGGACTCGAAGAACTGGCTGTAC
TCCGGGCTGATCGACGTTGTGATGGCGAAGCTCGCGCGGACTTACCCGAA
CGTCCACTTCATGCCGATCGACTTCGCGGTGCTGTGCCTGAACGGGTGGG
GCTCGGAAGCCGCAGCGGTTCCCCCCTCCTCGGCGTATCCTTCCCCTTCC
TCGGCATCCTCGTCCTCCTCCTCCTCCTCCTCCTCCTCTGTGTCGACGGC
CGGCAGCGAAGATGGTGACGGTGGTGGCCTCGGTGTAGGCGTGTCTGACG
TTGGCGCCGCGGCCGAAGCATCATCAGCGGCATCGGCAGCAGAAGCAGAA
GCTGCCGCGCTCCGGGATCAGAACATGGTTTTCCAGGACATCCTTGGGCG
ACCGATCGTGTACGCGGAGAAGAGACCGGTTATCTTCCTCACCCACGTGA
ACAACGTCCACTGGAACCTCCTGCGCGTGGAGCACAACCCGGTCCCCGAG
CTCCAGCTGTTCGAGCCGATGGGCAAACCGCCGCGGCGGCAGGGCGGGTC
CCGAACCAACTCCGGGGCGGCCGCGCCGAGCGCCTCCCGCGGCACCGGGT
TCCGGTGCATCCCGAAGGAGGTGTACCGGTGGCTAGACACGGTTTGGCCG
CTGGGCTCTGAAGACGGCGCCAGGGGCGGGAGCGCGAGCGCGAGCAGCAG
CGTGTCCGGGTCTAAGAGGAAAGTGACGAGCCAGACGCCTTGCCCCGACG
GTTGGGCCTCGCACGCGTACTCGGCCATCACACGGCAGCAACAGACGACC
GGCTTCGACTGCGGCGTTGCCTCGCTGCTGTACGCGGAGAAGTGCGGGCA
GGGACAGATGCGCGAGGACGTCGACGCGTGGACTACCCAAGGGGACATGA
CCGAGCACCGGCGAGCGCTGCAGCGGTACTTCAAGGAGGTTGTCGGCCAG
ACCGATGGGGCGGGAGCGCGAGCGCGAGCAGCAGCGTGTCCGGGTCTAAG
AGGAAAGTGACGAGCCAGACGCCTTGCCCCGACGGTTGGGCCTCGCACGC
GTACTCGGCCATCACACGGCAGCAACAGACGACCGGCTTCGACTGCGGCG
TTGCCTCGCTGCTGTACGCGGAGAAGTGCGGGCAGGGACAGATGCGCGAG
GACGTCGACGCGTGGACTACCCAAGGGGACATGACCGAGCACCGGCGAGC
GCTGCAGCGGTACTTCAAGGAGGTTGTCGGCCAGACCGAT
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