mRNA_S-dermatodea_contig11379.891.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11379.891.1 vs. uniprot
Match: A0A6H5K1M2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1M2_9PHAE) HSP 1 Score: 424 bits (1089), Expect = 6.940e-137 Identity = 366/676 (54.14%), Postives = 397/676 (58.73%), Query Frame = 1
Query: 1 MPRVRKQVARFDPSPEAVAPWNDTSRKVRIQIDLQARARHGLSXXXXXXXXXXXXXXXXXXXXQNTNPAPVASSNRK-------------PSV-----------------PAPGRKRQRA---STVGGAVGAGASXXXXXXXXYETPTWPPMSDLRTGXXXXXXXXXXXXXXXXXXXXXXXGVRLGSFITDSSLSCSTSGSDSDSSYSCASYCSDLIAPQGSAASATSDGCSSCLAAPLDAAAGGGCADCGGXXXXXXXXXXXXXXXXXXEAAPQGKTRAREENDDADERERVEKRRNVVTVRLARSQMPQRWATPSPPFKTCLDDVRPEDRLGGGMRDGXXXXXXXXXXXXXSMLGLSEEEGVDSKNWLYSGLIDVVMAKLARTYPNVHFMPIDFAVLCLNGWGSEAAAVPPSSAYPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALRDQNMVFQDILGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHNPVPELQLFEPMGKPPRRQGGSRTNSGAA-------APSASRGTGFRCIPKEVYRWLDTVWPLGSEDGARGGSASASSSVSGSKRKVTSQTPCPDGWASHAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQGDMTEHRRALQRYFKEVV 1908
MPR RK+VARFDPSPEAVA WNDTS K R+ +DLQAR R GLS XXXXXXXXXXXXXX R+ P+V PA GR+ RA +TVGG + + ++ W P T XXXXXXXXXXXXXXXXX G+ TDS YCSDL GSA+ S PL G +C XXXXXXXXXXXXXXXX NVVTV+LARSQMP RWA P PPFKTCL DVRP D+LGG R XXXXXXXXXXXXSMLGL E + VD+KNWL SG IDVVMAK ARTY NVHFMPIDFAVLCLNGWG A+ PP +A S XXXXXXXXX A L DQ+MVF+D+LGRPIVY+EKRPVIFLTHVNNVHWNLLRVEH+PVPELQLFEPMGKPPRRQG AP R TGFRCIPKEVYRWLD VWPL S RGGS S+ S GSKRK S TP +GWAS AYSAITRQQQTTGFDCGVASLLYAEKCGQGQMRED+DAWTTQ DMTE+RRALQRY +EV+
Sbjct: 1 MPRSRKKVARFDPSPEAVASWNDTSLKTRVVVDLQARVRLGLSSPEGAAXXXXXXXXXXXXXXXXXXXXXXXXLARRXXXXXXXXXXXXSPAVGRGGASASGRGRQQQEEPASGRRPSRACARATVGGVPPSSTTAT------HQRLAWQPPQSGATAAGRGDGXXXXXXXXXXXXXXXXXXXXNGASDTDSE------------------YCSDLA---GSASPPLS---------PL------GFDECPPIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXNVVTVKLARSQMPSRWAAPPPPFKTCLRDVRPADKLGG--RACGXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWG--ASDTPPPAAAASGGDAMGSEXXXXXXXXXAATAAN------------------------------ADLADQSMVFKDVLGRPIVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGG-RSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSG--GSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDIDAWTTQADMTEYRRALQRYVEEVL 592
BLAST of mRNA_S-dermatodea_contig11379.891.1 vs. uniprot
Match: D8LIB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB2_ECTSI) HSP 1 Score: 415 bits (1067), Expect = 1.470e-133 Identity = 284/386 (73.58%), Postives = 301/386 (77.98%), Query Frame = 1
Query: 793 NVVTVRLARSQMPQRWATPSPPFKTCLDDVRPEDRLGG---GMRDGXXXXXXXXXXXXXSMLGLSEEEGVDSKNWLYSGLIDVVMAKLARTYPNVHFMPIDFAVLCLNGWGSEAAAVPPSSAYPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALRDQNMVFQDILGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHNPVPELQLFEPMGKPPRRQGGSRTNSGAA-------APSASRGTGFRCIPKEVYRWLDTVWPLGSEDGARGGSASASSSVSGSKRKVTSQTPCPDGWASHAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQGDMTEHRRALQRYFKEVVGQTD 1920
NVVTV+LARSQMP RWA P PPF+TCL DVRP D+LGG G R XXXXXXXXXXXXSMLGL E + VD+KNWL SG IDVVMAK ARTY NVHFMPIDFAVLCLNGWG+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AAL DQ+MVF+D+LGRPIVY+EKRPVIFLTHVNNVHWNLLRVEH+PVPELQLFEPMGKPPRRQG AP R TGFRCIPKEVYRWLD VWPL S RGGS S+ S GSKRK S TP +GWAS AYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQ DMTE+RRALQRY +EV+ Q +
Sbjct: 233 NVVTVKLARSQMPSRWAAPPPPFETCLRDVRPADKLGGRASGGRACGXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGAPDTPX----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAANAALADQSMVFKDVLGRPIVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGG-RSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSG--GSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYVEEVLRQEE 599
BLAST of mRNA_S-dermatodea_contig11379.891.1 vs. uniprot
Match: A0A7S2SPQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPQ6_9STRA) HSP 1 Score: 190 bits (482), Expect = 2.830e-51 Identity = 129/372 (34.68%), Postives = 163/372 (43.82%), Query Frame = 1
Query: 796 VVTVRLARSQMPQRWATPSPPFKTCLDDVRPEDRLGGGMRDGXXXXXXXXXXXXXSMLGLSEEEGVDSKNWLYSGLIDVVMAKLARTYPNVHFMPIDFAVLCLNGWGSEAAAVPPSSAYPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALRDQNMVFQ--DILGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHNPVPELQLFEPMGKPPRRQGGSRTNSGAAAPSASRGTGFRCIPKEVYRWLDTVWPLGSEDGARGGSASASSSVSGSKRKVTSQTPCPDGWASHAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQGDMTEHRRALQRYFKEV 1905
VVTVRLAR +MP RW P PPF + L+ V G + LS +E V ++WL S ID+V+++ AR YPNVHFMP++FA L ++ +M FQ DILG+ I Y ++PV+FL ++ N+HWNL RV+H P+ ELQLFEPMGKP R G S R IPK + WLDTVWPLGSE + W + SAIT Q Q TGFDCGVA +LYAEKC QG M+ED+D T Q D T+ R+ LQR E+
Sbjct: 70 VVTVRLARCKMPYRWREPLPPFVSILNHV-------GALHLDSDARRLDHATVTVLRRALSSDE-VQDESWLSSSFIDLVLSRYARRYPNVHFMPVEFAAFRLK-----------------------------------------------------------------------TMQTVDM-FQATDILGQRIDYNMRKPVVFLANIANMHWNLFRVQHWPLKELQLFEPMGKPATRHGVS----------------LRYIPKHIIHWLDTVWPLGSE---------------------------AESWLFRSCSAITTQHQLTGFDCGVACILYAEKCAQGLMKEDIDDSTKQSDFTQFRQDLQRRLSEL 318
BLAST of mRNA_S-dermatodea_contig11379.891.1 vs. uniprot
Match: A0A836CDU6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDU6_9STRA) HSP 1 Score: 186 bits (471), Expect = 1.140e-49 Identity = 97/189 (51.32%), Postives = 123/189 (65.08%), Query Frame = 1
Query: 1351 DILGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHNPVPELQLFEPMGKPPRRQGGSRTNSGAAAPSASRGTGFRCIPKEVYRWLDTVWPLGSEDGARGGSASASSSVSGSKRKVTSQTPCPDGWASHAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQGDMTEHRRALQRYFKEVVGQT 1917
DILG+ I YA ++P+IFL +V N+HWNLLRV+H PVPELQLFEP+GKP +R G+ + S G +R IPK+V+ WLDT+ ARGG GWA+ + SAITRQQQTTGFDCGVASLLYAEKCGQ QMRED+DA TTQ D+T +R+ LQ++ + + Q+
Sbjct: 99 DILGQTIDYAARKPIIFLANVKNLHWNLLRVQHFPVPELQLFEPLGKPAKRAHGAHS---------SEGVSYRYIPKDVFVWLDTMC-------ARGG-----------------------GWATRSVSAITRQQQTTGFDCGVASLLYAEKCGQDQMREDIDAATTQDDITAYRQVLQKFLRSLAAQS 248
BLAST of mRNA_S-dermatodea_contig11379.891.1 vs. uniprot
Match: A0A7S2SPU9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPU9_9STRA) HSP 1 Score: 154 bits (388), Expect = 4.410e-40 Identity = 83/184 (45.11%), Postives = 101/184 (54.89%), Query Frame = 1
Query: 1354 ILGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHNPVPELQLFEPMGKPPRRQGGSRTNSGAAAPSASRGTGFRCIPKEVYRWLDTVWPLGSEDGARGGSASASSSVSGSKRKVTSQTPCPDGWASHAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQGDMTEHRRALQRYFKEV 1905
ILG+ I Y ++PV+FL ++ N+HWNL RV+H P+ ELQLFEPMGKP R G S R IPK + WLDTVWPLGSE + W + SAIT Q Q TGFDCGVA +LYAEKC QG M+ED+D T Q D T+ R+ LQR E+
Sbjct: 5 ILGQRIDYNMRKPVVFLANIANMHWNLFRVQHWPLKELQLFEPMGKPATRHGVS----------------LRYIPKHIIHWLDTVWPLGSE---------------------------AESWLFRSCSAITTQHQLTGFDCGVACILYAEKCAQGLMKEDIDDSTKQSDFTQFRQDLQRRLSEL 145
BLAST of mRNA_S-dermatodea_contig11379.891.1 vs. uniprot
Match: A0A7S2GCQ8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GCQ8_9STRA) HSP 1 Score: 144 bits (362), Expect = 3.150e-34 Identity = 80/185 (43.24%), Postives = 101/185 (54.59%), Query Frame = 1
Query: 1351 DILGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHNPVPELQLFEPMGKPPRRQGGSRTNSGAAAPSASRGTGFRCIPKEVYRWLDTVWPLGSEDGARGGSASASSSVSGSKRKVTSQTPCPDGWASHAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQGDMTEHRRALQRYFKEV 1905
D++G+ I Y +PVIF ++ N+HWN+LRV+H P+ ELQLFEPMGKP R G S +R IP+ + WLDT WPL ++G S S W A SAIT Q Q FDCGVA LLYAEKC QG M+ED+ A T Q D+TE R+ LQR + +
Sbjct: 183 DLVGKKIDYNIPKPVIFFANIANMHWNVLRVQHWPLKELQLFEPMGKPASRNGVS----------------YRNIPQHIIHWLDTCWPL--DEGHPKDSGGRS-------------------WIVQACSAITTQHQVNSFDCGVACLLYAEKCAQGMMKEDIHATTNQRDITEFRQCLQRCLRSL 330
BLAST of mRNA_S-dermatodea_contig11379.891.1 vs. uniprot
Match: A0A5D6Y3L5_9STRA (ULP_PROTEASE domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3L5_9STRA) HSP 1 Score: 140 bits (353), Expect = 8.440e-34 Identity = 95/310 (30.65%), Postives = 131/310 (42.26%), Query Frame = 1
Query: 976 SEEEGVDSKNWLYSGLIDVVMAKLARTYPNVHFMPIDFAVLCLNGWGSEAAAVPPSSAYPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALRDQNMVFQDILGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHNPVPELQLFEPMGKPPRRQGGSRTNSGAAAPSASRGTGFRCIPKEVYRWLDTVWPLGSEDGARGGSASASSSVSGSKRKVTSQTPCPDGWASHAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQGDMTEHRRALQRYFKEV 1905
SE++ +D +WL S L+D+++ +LA YP VHF+P DF L G S + + PS D + +D+LGR + Y RP++F + +HWNL RV+ P PELQLFEPMG+P S+ G R +P+ V WL+ +P Q P W S A SAIT QQ +GFDCGVA LLYA+KCGQGQ R+++DA T Q +T R LQ+ + +
Sbjct: 53 SEDDSIDDTSWLTSTLMDLMLWRLAGQYPGVHFLPTDFFHCVLEG-RSRSRSQHGRKRGPS---------------------------------------------------------DCDFRVRDVLGRLVDYGSNRPLLFAVNCGRIHWNLFRVQLTPQPELQLFEPMGRP----------------SSRSGLSHRYVPRSVVEWLEACYP---------------------------QHP---SWISRAVSAITAPQQVSGFDCGVACLLYADKCGQGQTRQEIDARTDQLAITGFRATLQQQLQAM 258
BLAST of mRNA_S-dermatodea_contig11379.891.1 vs. uniprot
Match: A0A7S1C2Y9_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2Y9_9STRA) HSP 1 Score: 132 bits (332), Expect = 3.150e-32 Identity = 76/186 (40.86%), Postives = 97/186 (52.15%), Query Frame = 1
Query: 1360 GRPIVYA---EKRPVIFLTHVNNVHWNLLRVEHNPVPELQLFEPMGKPPRRQGGSRTNSGAAAPSASRGTGFRCIPKEVYRWLDTVWPLGSEDGARGGSASASSSVSGSKRKVTSQTPCPDGWASHAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQGDMTEHRRALQRYFKEVV 1908
G P++ A E RP++F +V N+HWNLLRV PEL+++EPMG+P RQ ++ R +P+ V WLD V LG G+ W S A SAIT + Q TGFDCGVA LLYAEKC Q Q REDV+AWT Q D+T RR LQ +F+ +
Sbjct: 18 GEPLLPATAEESRPLLFFWNVGNMHWNLLRVLRGRRPELEIYEPMGRPVSRQRDGVLSA-------------RSLPRCVVTWLDAVCSLGEGGGS---------------------------WGSRALSAITIKHQVTGFDCGVACLLYAEKCAQRQAREDVEAWTDQADITAFRRTLQDFFETIA 163
BLAST of mRNA_S-dermatodea_contig11379.891.1 vs. uniprot
Match: A0A662YFQ0_9STRA (ULP_PROTEASE domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFQ0_9STRA) HSP 1 Score: 127 bits (320), Expect = 7.440e-29 Identity = 89/303 (29.37%), Postives = 124/303 (40.92%), Query Frame = 1
Query: 982 EEGVDSKNWLYSGLIDVVMAKLARTYPNVHFMPIDFAVLCLNGWGSEAAAVPPSSAYPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALRDQNMVFQDILGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHNPVPELQLFEPMGKPPRRQGGSRTNSGAAAPSASRGTGFRCIPKEVYRWLDTVWPLGSEDGARGGSASASSSVSGSKRKVTSQTPCPDGWASHAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQGDMTEHRRALQR 1890
E+ +D +WL LID+++ K A YP VHF+P F L + SS P RD + +D+LGR + Y P++F+ +V +HWNL RV+ P P LQLFEPMG+ SRT G +R +P+ V WL+T +P + GW + SAIT +QQ +GFDCGVA LLYA+KCG+GQ E+++A Q +T R+ LQR
Sbjct: 97 EDRIDETSWLTGTLIDLMLWKFANLYPTVHFLPTAFFHFHLEATNA-------SSGVP---------------------------------------------WRRRRRRPKRLKRDYQV--RDVLGRVVDYDSDTPLVFIVNVGQIHWNLFRVQLQPTPRLQLFEPMGRL-----ASRT-----------GISYRSVPRSVIEWLETCYPQHT------------------------------GWLARTVSAITHKQQVSGFDCGVACLLYADKCGRGQSGEEINAQIDQQAITSFRKQLQR 299
BLAST of mRNA_S-dermatodea_contig11379.891.1 vs. uniprot
Match: A0A2D4BLN7_PYTIN (WD repeat-containing protein srw1 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BLN7_PYTIN) HSP 1 Score: 133 bits (334), Expect = 8.890e-29 Identity = 73/186 (39.25%), Postives = 97/186 (52.15%), Query Frame = 1
Query: 1351 DILGRPIVYAEKRPVIFLTHVNNVHWNLLRVEHNPVPELQLFEPMGKPPRRQGGSRTNSGAAAPSASRGTGFRCIPKEVYRWLDTVWPLGSEDGARGGSASASSSVSGSKRKVTSQTPCPDGWASHAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQGDMTEHRRALQRYFKEVV 1908
D+LGR + +A+ RP+IF+ +V +HWNLLRV+ +PV ELQLFEPMG+ R RG FR IP+ V +WLD +P W SAIT QQQ +G DCGVA LLYA+KC QGQ RE+++A Q ++ RR LQR ++V+
Sbjct: 75 DVLGRAVEFADARPMIFVVNVGLIHWNLLRVQLHPVAELQLFEPMGRLASR----------------RGISFRSIPRSVIQWLDVCFPQ------------------------------QQSWLRRTVSAITTQQQLSGVDCGVACLLYADKCAQGQHREEINATVDQPAISSFRRRLQRELRDVI 214 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11379.891.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11379.891.1 >prot_S-dermatodea_contig11379.891.1 ID=prot_S-dermatodea_contig11379.891.1|Name=mRNA_S-dermatodea_contig11379.891.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=640bp MPRVRKQVARFDPSPEAVAPWNDTSRKVRIQIDLQARARHGLSSAEAAALback to top mRNA from alignment at S-dermatodea_contig11379:4181..6361+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11379.891.1 ID=mRNA_S-dermatodea_contig11379.891.1|Name=mRNA_S-dermatodea_contig11379.891.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2181bp|location=Sequence derived from alignment at S-dermatodea_contig11379:4181..6361+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11379:4181..6361+ >mRNA_S-dermatodea_contig11379.891.1 ID=mRNA_S-dermatodea_contig11379.891.1|Name=mRNA_S-dermatodea_contig11379.891.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3840bp|location=Sequence derived from alignment at S-dermatodea_contig11379:4181..6361+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |