mRNA_S-dermatodea_contig11372.886.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11372.886.1
Unique NamemRNA_S-dermatodea_contig11372.886.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig11372.886.1 vs. uniprot
Match: D7FKV7_ECTSI (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKV7_ECTSI)

HSP 1 Score: 895 bits (2313), Expect = 0.000e+0
Identity = 447/506 (88.34%), Postives = 460/506 (90.91%), Query Frame = 1
Query:    1 CELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEPGDKAIIVWEVLTGQMLRAFPMATTTAAVLHVKLTRASDPHRTVDGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDVKSLKAEGVSDFEWSPKDNIIAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFAVVLGDIPKLEVTFYTMKGGAGKNELQELDTLRERPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVAQPVTGSHWKAQMDNGYQLFSFQARNRGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRFERDDKEKDRRKAREAMSDKIRMKMEFRQHVAEMRQRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 1518
            CELFLMWSPQGTYLTTFHVPGIALWGGE+FEKQGRFPHKDVKVVEFSPCETYVMTCNFE GDKAIIVWEVLTGQMLRAFPMATTTAA                DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLD KSLKAEGVSDFEWSPKDN++AYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFA+VLGD+PKLEVTFYTMKGGAGKNELQEL+TL++RPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAV+QPVTGSHWKAQMDNGYQLFSFQ    GERF+EFKKDNFYQIQWRPRPASLLTSAEKKK+VKNLRKYEK                    KI+MK+EFRQ VAEM  RL GRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ
Sbjct:  216 CELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAA----------------DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQ----GERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXXXXXKIQMKLEFRQQVAEMNLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 701          
BLAST of mRNA_S-dermatodea_contig11372.886.1 vs. uniprot
Match: A0A835YNH6_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH6_9STRA)

HSP 1 Score: 655 bits (1691), Expect = 8.070e-229
Identity = 318/504 (63.10%), Postives = 394/504 (78.17%), Query Frame = 1
Query:    4 ELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEPGDKAIIVWEVLTGQMLRAFPMATTTAAVLHVKLTRASDPHRTVDGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDVKSLKAEGVSDFEWSPKDN--IIAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFAVVLG-DIPKLEVTFYTMKGGAGKNELQELDTLRERPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVAQPVTGSHWKAQMDNGYQLFSFQARNRGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRFERDDKEKDRRKAREAMSDKIRMKMEFRQHVAEMRQRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVK 1506
            EL++ WSPQGTYL + H+PGIALWGGEQFEKQGRF H +VKV+EFSPCE Y++TCNF+  ++A+IVWEV +G +LR FP              RA +      G  SLF+WS DG+++ARKG+D +SIY LPSM LLD KSLKA G++DFEWSP  +   +AYWAPEQ N PARVSVVEIPSRK+LRQKNL  VSECRLHWQ+EG YLCVKVLRHSK+KKTMYNNFE+FRV +P VPVE +E +  V AFAWEP GDRFA+V G ++P++ +TFYTMKGGA  NEL E+ TL ++P NH+YWSP G   ++AAMG++ G  NG L FYDVE+++ L+++EHFR +Y+EWDPSGRY CTAV QP+ GSHWKAQMDNGY+L+SFQ    GE+F E  KDNFYQ+ WRPRP SLL+S EKKK+V+NL+KYE+RFER DK   RRKAR AM+ K+R K  FR HVA  R+RL  R  ELV+LR+GYDS DE+++ V++RT EV++SVK
Sbjct:  229 ELYVTWSPQGTYLASLHIPGIALWGGEQFEKQGRFAHSNVKVIEFSPCENYLLTCNFDTTERAMIVWEVRSGAVLRTFP-------------ARAFE-----GGPPSLFKWSPDGRFIARKGRDCVSIYALPSMALLDKKSLKATGIADFEWSPSTSSCALAYWAPEQDNTPARVSVVEIPSRKDLRQKNLFNVSECRLHWQNEGTYLCVKVLRHSKTKKTMYNNFELFRVADPQVPVEMLELRSNVIAFAWEPTGDRFAIVHGTELPRVNITFYTMKGGASGNELAEVVTLEDKPVNHLYWSPQGQFIVMAAMGENTGGTNGYLNFYDVESKTILRESEHFRLSYLEWDPSGRYICTAVNQPIDGSHWKAQMDNGYRLWSFQ----GEQFYELTKDNFYQVLWRPRPVSLLSSEEKKKVVRNLKKYERRFERADKIASRRKARAAMAGKVRQKQAFRAHVAARRERLLARHHELVELRDGYDSHDEANFFVETRTREVIMSVK 710          
BLAST of mRNA_S-dermatodea_contig11372.886.1 vs. uniprot
Match: A0A6H5KAX0_9PHAE (eIF2A domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAX0_9PHAE)

HSP 1 Score: 624 bits (1610), Expect = 9.330e-222
Identity = 321/409 (78.48%), Postives = 342/409 (83.62%), Query Frame = 1
Query:  310 DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDVKSLKAEGVSDFEWSPKDNIIAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFAVVLGDIPKLEVTFYTMKGGAGKNELQELDTLRERPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVAQPVTGSHWKAQMDNGYQLFSFQARNRGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRFERDDKEKDRRKAREAMSDKIRMKMEFRQH------VAEMRQRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 1518
            DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLD KSLKAEGVSDFEWSPKDN++AYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHW                                            QVAAFAWEPAGDRFA+VLGD+PKLEVTFYTMKGGAGKNELQ L+TL++RPFNHIYWSP+GNIC+LAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAV+QPVTG HWKAQMDNGYQLFSFQ    GERF+EFKKD+FYQIQWRPRPASLLTSAEKKK+VKNLRKY+KRFE+DD+      AREAM+DKI+MK+EFRQ       VA+M+ RL  RRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ
Sbjct:   14 DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHW--------------------------------------------QVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQVLETLQDRPFNHIYWSPVGNICILAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGGHWKAQMDNGYQLFSFQ----GERFHEFKKDHFYQIQWRPRPASLLTSAEKKKVVKNLRKYDKRFEKDDRXXXXXXAREAMADKIQMKLEFRQQASGLSRVADMKLRLEARRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 374          
BLAST of mRNA_S-dermatodea_contig11372.886.1 vs. uniprot
Match: G5A2B4_PHYSP (Eukaryotic translation initiation factor 3 subunit B n=7 Tax=Phytophthora TaxID=4783 RepID=G5A2B4_PHYSP)

HSP 1 Score: 519 bits (1336), Expect = 2.190e-175
Identity = 265/507 (52.27%), Postives = 350/507 (69.03%), Query Frame = 1
Query:    1 CELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEPGDKAIIVWEVLTGQMLRAFPMATTTAAVLHVKLTRASDPHRTVDGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDVKSLKAEGVSDFEWSPKDNIIAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFAVVLGD-IPKLEVTFYTMKGGAGK-NELQELDTLRERPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVAQPVTGSHWKAQMDNGYQLFSFQARNRGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRFERDDKEKDRRKAREAMSDKIRMKMEFRQHVAEMRQRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 1515
            C  +++WSPQGTYL TFH  GIALWGG+++EK GRF HK+VK+  FSP E Y++T +    D AII+W+V T +MLRAFP    T A   V           V G  + F+WSAD KY+AR+GKD+ISIYELPSM+LL+ KSL+AEGV DF WSP D I+AYWAPE  N PARVS+VE+PSR+E+RQKNL  VS+C+LHW   G +LCVKV RHSKSKKTMY NFE+FRV E LVPVE +E K+ + AFAWEP G RFA   G+   +L V+FY M GG+    E+  L TL+++  +H+YWSP+GN  +LA +G+     NG+LEF+D   Q ++   EHF+C ++EWDPSGR   TAV QP+  S++K  MDNGY L++FQ    G++  E KKD FYQ  WRPRP +LL+  E   +VKNL+K+EKRF++ D+ K+R +     +++ R + EF++ + +     A RR E V L +GYDS+DES Y+V S T + VL  KE +
Sbjct:  206 CSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVKLAVFSPNENYILTLSETEQDSAIIIWDVKTSKMLRAFPAGKPTGAKGEV-----------VQGLMTPFKWSADDKYVARRGKDVISIYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMYTNFELFRVHEQLVPVEMLEVKESIVAFAWEPKGTRFATAHGEGQQRLNVSFYDMDGGSKSVKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDATEQQSITVQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQ----GKQLLEEKKDAFYQFLWRPRPRTLLSDEEYNNVVKNLKKFEKRFDQMDRLKERERLAAEKAERNRQEQEFQELLEKRLASAAARRAEYVALLDGYDSEDESEYIVQSHTYDDVLETKEEV 693          
BLAST of mRNA_S-dermatodea_contig11372.886.1 vs. uniprot
Match: A0A8K1FRG0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRG0_PYTOL)

HSP 1 Score: 518 bits (1335), Expect = 3.000e-175
Identity = 265/507 (52.27%), Postives = 350/507 (69.03%), Query Frame = 1
Query:    1 CELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEPGDKAIIVWEVLTGQMLRAFPMATTTAAVLHVKLTRASDPHRTVDGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDVKSLKAEGVSDFEWSPKDNIIAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFAVVLGD-IPKLEVTFYTMKGGAGKNELQELDTLRERPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVAQPVTGSHWKAQMDNGYQLFSFQARNRGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRFERDDKEKDRRKAREAMSDKIRMKMEFRQHVAEMRQRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 1518
            C  +++WSPQGTYL TFH  GIALWGG+ +EK GRF HK+VK+  FSP E Y++T +    + AII+W+V T +MLRAFP    T A   V           V G  + F+WSAD +++AR+GKD+IS+YELPSM+LLD KSLKA+GV DF WSP D I+AYWAPE  N PARVS+VE+PSR+E+RQKNL  VS+C+L W   G +L VKV RHSKSKKT++ NFEIFRV E LVPVE+ E K  + AF++EP G RFA+V G+   +L V+FY M GGA KNEL  L TL ++P +H+YWSP GN  +LA +G+     NG LEF+D + + ++   EHF+C ++EWDPSGR   +AV QP+  S++K QMDNG+ L++FQ    G++  E KKD FYQ  WRPRP +LL+  E K +VKNL+KYEKRF   D+ K+R +     ++K R   EF   VA   +    RRQE + L NGYDS+D+  Y+V++R+ + VLS KE +Q
Sbjct:  206 CSQYVLWSPQGTYLATFHPQGIALWGGDNYEKVGRFAHKNVKIAVFSPQENYLVTLSETDTENAIIIWDVKTSKMLRAFPAGKPTGAKGEV-----------VQGLMTPFKWSADDRFVARRGKDVISVYELPSMKLLDKKSLKADGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLQWHPNGTFLNVKVTRHSKSKKTLFTNFEIFRVHESLVPVESFEMKDTIVAFSFEPKGSRFAIVHGEGNQRLNVSFYDMNGGAKKNELTLLYTLTDKPCSHLYWSPHGNNIVLAGLGEI----NGVLEFWDTDEKQSITIQEHFKCTHVEWDPSGRVVSSAVCQPIDNSYYKFQMDNGFTLWTFQ----GKKLLEEKKDAFYQFLWRPRPRTLLSDKEYKDVVKNLKKYEKRFNEMDRMKERERIAAEKAEKQRQHQEFVDLVAARAETARARRQEYIALLNGYDSEDDDEYIVETRSYDDVLSEKEEVQ 693          
BLAST of mRNA_S-dermatodea_contig11372.886.1 vs. uniprot
Match: M4BHP4_HYAAE (Eukaryotic translation initiation factor 3 subunit B n=15 Tax=Peronosporaceae TaxID=4777 RepID=M4BHP4_HYAAE)

HSP 1 Score: 514 bits (1323), Expect = 4.790e-173
Identity = 261/507 (51.48%), Postives = 352/507 (69.43%), Query Frame = 1
Query:    1 CELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEPGDKAIIVWEVLTGQMLRAFPMATTTAAVLHVKLTRASDPHRTVDGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDVKSLKAEGVSDFEWSPKDNIIAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFAVVLGDIPK-LEVTFYTMKGGAG-KNELQELDTLRERPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVAQPVTGSHWKAQMDNGYQLFSFQARNRGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRFERDDKEKDRRKAREAMSDKIRMKMEFRQHVAEMRQRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 1515
            C  +++WSPQGTYL TFH  GIALWGG+++EK GRF HK VK+  FSP E Y++T +    + AII+W+V T ++LRAFP    T A   V           V G  + F+WSAD KY+AR+G D+IS+YELPSM+LL+ KSL+AEGV DF WSP D I+AYWAPE  N PARVS+VE+PSR E+RQKNL  VS+C+LHW  +G +LCVKV RHSKSKKTMY NFE+FRV+E LVPVE +E K  + AFAWEP G RFA V G+  + L V+FY M GG+    E+  L TL+++  +H+YWSP+GN  +LA +G+     NG+LEF+D   Q ++   EHF+C+++EWDPSGR   TAV QP+  S++K  MDNGY L++FQ    G++  E KKD F+Q  WRPRP +LL+ A+ K +VKNL+K+EKRF++ D+ K+R +     +++ + + EF++ + +     AGRR E + L  GYDSDDE+ Y+V   T + VL VKE +
Sbjct:  206 CMQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKKVKLAMFSPNENYLITVSETEQESAIIIWDVKTSKLLRAFPAGKPTGAKGEV-----------VQGLMTPFKWSADDKYVARRGTDVISVYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRHEVRQKNLFNVSDCKLHWHPDGTFLCVKVTRHSKSKKTMYTNFELFRVQEQLVPVEMLEVKDNIVAFAWEPKGTRFAAVHGEGQQHLNVSFYDMDGGSNVAKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDTTEQQSITVQEHFKCSHVEWDPSGRVVATAVCQPLDNSYYKLTMDNGYNLWTFQ----GKKLLEEKKDTFFQFLWRPRPRTLLSDAQYKNVVKNLKKFEKRFDQMDRFKERERLAAENAERNKKEQEFQELLQKRLITAAGRRAEYLSLLGGYDSDDENEYIVQKHTYDDVLEVKEEV 693          
BLAST of mRNA_S-dermatodea_contig11372.886.1 vs. uniprot
Match: A0A5D6XPM0_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPM0_9STRA)

HSP 1 Score: 510 bits (1314), Expect = 5.330e-172
Identity = 259/511 (50.68%), Postives = 344/511 (67.32%), Query Frame = 1
Query:    1 CELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEPGDKAIIVWEVLTGQMLRAFPMATTTAAVLHVKLTRASDPHRTVDGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDVKSLKAEGVSDFEWSPKDNIIAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFAVVLGDIP-KLEVTFYTMKGGAG-----KNELQELDTLRERPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVAQPVTGSHWKAQMDNGYQLFSFQARNRGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRFERDDKEKDRRKAREAMSDKIRMKMEFRQHVAEMRQRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 1515
            C  +++WSP GTYL TFH PG+ALW GE++EK GRF HK+VK+  FSP ETY++T +    + AIIVW+V +G++LR FP    T     V           V G  + F+WSAD +++AR+GKD++S+YELPSM+LL+ KSLKA+GV DF WSP D I+AYWAPE  N PARVS+VE+PSR E+RQKNL  VS+C+L+W   G +L VKV RHSKSKKT++ NFE+FRVREPLVPVE +E K  + AFAWEP G RFA V G+   +L V+FY M GGA        E+  L TL E+P +H+YWSP+GN  +LA +G+     NG LEF+D + + ++   EHF+C ++EWDPSGR   T+V QP+  S++K QMDNGY L+SFQ    G+   E KKD FYQ  WRPRP SLL+  E   +VKNL+KYEKRF   D+ K+R +     ++K R++ EF+  V    + +   R   V L  GYDS+DE  Y+V++   +VVLS  E +
Sbjct:  207 CSQYVLWSPHGTYLATFHQPGLALWAGEKYEKVGRFAHKNVKIAVFSPNETYLLTVSETDAENAIIVWDVKSGKILRTFPAGKPTGVKGEV-----------VQGLQTPFKWSADDRFVARRGKDVVSVYELPSMKLLEKKSLKADGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRTEIRQKNLFNVSDCKLNWHPNGTFLGVKVTRHSKSKKTLFTNFEMFRVREPLVPVEMLEMKDSIVAFAWEPKGTRFATVHGESQLRLNVSFYDMNGGAAGSKAASTEITLLYTLTEKPCSHLYWSPLGNNIVLAGLGE----MNGSLEFWDTDERQSITAQEHFKCTHVEWDPSGRVVATSVCQPLDNSYYKFQMDNGYNLWSFQ----GKLLKEEKKDAFYQFLWRPRPRSLLSDKEYANVVKNLKKYEKRFNEMDRLKERERLAAIQAEKNRLRQEFQDLVEARVRAVQSARATYVSLLGGYDSEDEDEYIVETHVHDVVLSKAEEV 698          
BLAST of mRNA_S-dermatodea_contig11372.886.1 vs. uniprot
Match: A0A0P1APB3_PLAHL (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APB3_PLAHL)

HSP 1 Score: 509 bits (1311), Expect = 1.290e-171
Identity = 260/507 (51.28%), Postives = 349/507 (68.84%), Query Frame = 1
Query:    1 CELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEPGDKAIIVWEVLTGQMLRAFPMATTTAAVLHVKLTRASDPHRTVDGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDVKSLKAEGVSDFEWSPKDNIIAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFAVVLGD-IPKLEVTFYTMKGGA-GKNELQELDTLRERPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVAQPVTGSHWKAQMDNGYQLFSFQARNRGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRFERDDKEKDRRKAREAMSDKIRMKMEFRQHVAEMRQRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 1515
            C  +++WSPQG+YL TFH  GIALWGGE++EK GRF HK+VK+  FSP E Y++T +    + AII+W+V T +MLRAFP   +T     V           V G  + F+WSAD K++AR+GKD+IS+YELPSM+LLD KSL+AEGV DF WSP D I+AYWAPE  N PARVS+VE+PSR+E+RQKNL  VS+C+LHW   G +LCVKV RHSKSKKTM+ NFE+FRV E LVPVE +E K  + AFAWEP G RFA V G+   +L V+FY M GG+    E+  L TL ++  +H+YWSP+GN  +LA +G+     NG+LEF+DV  Q ++   EHF+C ++EWDPSGR   TAV QP+  S++K  MDNGY L++FQ    G++  E KK+ FYQ  WRPRP +LL+ +E   +VKNL+ +EKRF++ D+ K+R +     +++ R + EF++ +       A RR E + L +GYDS DES Y+V S T + VL +KE +
Sbjct:  206 CSQYVLWSPQGSYLATFHPQGIALWGGEKYEKVGRFAHKNVKLAVFSPHEKYLITLSETEQEAAIIIWDVQTSKMLRAFPAGKSTGVKGEV-----------VQGLMTPFKWSADDKFVARRGKDVISVYELPSMKLLDKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMFTNFELFRVHEQLVPVEMLEMKDNIVAFAWEPKGTRFATVHGEGQQRLNVSFYDMDGGSKSSKEVTLLYTLTDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDVSEQQSITIQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQ----GKQLLEEKKETFYQFLWRPRPRTLLSESEYNHVVKNLKTFEKRFDQMDRLKERERLAALNAERKREEQEFQELLDRRLAIAAARRAEYIALLDGYDSQDESEYIVQSHTYDDVLEIKEEV 693          
BLAST of mRNA_S-dermatodea_contig11372.886.1 vs. uniprot
Match: A0A484EF01_BRELC (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EF01_BRELC)

HSP 1 Score: 507 bits (1306), Expect = 7.100e-171
Identity = 258/507 (50.89%), Postives = 347/507 (68.44%), Query Frame = 1
Query:    1 CELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEPGDKAIIVWEVLTGQMLRAFPMATTTAAVLHVKLTRASDPHRTVDGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDVKSLKAEGVSDFEWSPKDNIIAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFAVVLGD-IPKLEVTFYTMKGG-AGKNELQELDTLRERPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVAQPVTGSHWKAQMDNGYQLFSFQARNRGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRFERDDKEKDRRKAREAMSDKIRMKMEFRQHVAEMRQRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 1515
            C  +++WSPQGTYLTTFH  GIALWGGE++EK GRF HK+VK+  FSP E Y++T +    + AII+W+V T +MLRAFP    T +   V           V G  + F+WSAD KY+AR+GKD+IS+YELPSM+LL+ KSL+AE V DF WSP D I+AYWAPE  N PARVS+VE+PSR+E+RQKNL  VS+C+LHW   G +LC+KV RHSKSKKTMY NFE+FRV EPLVPVE +E K  + AFAWEP G RFA V G+   +L V+FY M GG     E+  L TL+++  +H+YWSP+GN  +LA +G+     NG+LEF+D   Q +L   +HF+C ++EWDPSGR   TAV QP+  S++K  MDNGY L++FQ    G +    KK+ FYQ  WRPRP SLL+  E   +VKNL+K+EKRF++ D+ K+R +     +++++ + EF++ +   +   A RR E + L +GYDS+DE  Y+  + T + VL V E +
Sbjct:  205 CSQYVLWSPQGTYLTTFHPQGIALWGGEKYEKVGRFAHKNVKMAVFSPHENYLITVSETEQEAAIIIWDVHTSKMLRAFPAGKATGSKGEV-----------VQGLTTPFKWSADDKYIARRGKDVISVYELPSMKLLEKKSLRAEEVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCIKVTRHSKSKKTMYTNFELFRVHEPLVPVEMLEIKDNIVAFAWEPKGTRFATVHGEGQQRLNVSFYDMDGGNKSAKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDATEQQSLTVQDHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYILWTFQ----GMQLLAEKKETFYQFLWRPRPRSLLSDEEYNNVVKNLKKFEKRFDQMDRFKERERLAAIKAERMQKEQEFQELLETRQTTTAARRLEYIALLDGYDSEDEREYIFQTHTYDDVLEVNEEV 692          
BLAST of mRNA_S-dermatodea_contig11372.886.1 vs. uniprot
Match: A0A3M6VP81_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VP81_9STRA)

HSP 1 Score: 507 bits (1306), Expect = 7.330e-171
Identity = 261/507 (51.48%), Postives = 348/507 (68.64%), Query Frame = 1
Query:    1 CELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEPGDKAIIVWEVLTGQMLRAFPMATTTAAVLHVKLTRASDPHRTVDGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDVKSLKAEGVSDFEWSPKDNIIAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFAVVLGD-IPKLEVTFYTMKG-GAGKNELQELDTLRERPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVAQPVTGSHWKAQMDNGYQLFSFQARNRGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRFERDDKEKDRRKAREAMSDKIRMKMEFRQHVAEMRQRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 1515
            C  +++WSPQGTYL TFH  GIALWGG+++EK GRF HK+V    FSP E Y++T +    D AII+W+V T +MLRAFP    T A            +  V G  + F+WSA  KY+AR+G D+ISIYELPSM+LL+ KSL+AEGV DF WSP D I+AYWAPE  N PARVS+VE+PSR+E+RQKNL  VS+C+LHW   G +LCVKV RHSKSKKTM+ NFE+FR++E LVPVE +E K  + AFAWEP G RFA V G+   +L V+FY M G      E+  L TL+++  +H+YWSP+GN  +LA +G+     NG+LEF+D   Q ++   EHF+C ++EWDPSGR   TAV QP+  S++K  MDNGY L++FQ    G++  E KK++FYQ  WRPRP +LL+ AE KK+VKNL+KYEKRF++ D+ K+R +     +++ R   EF++ +  +    A RR E + L +GYDS+DE+ Y+V S T + VL  KE I
Sbjct:  206 CSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVTRAVFSPHENYLITVSETEQDSAIIIWDVKTSKMLRAFPAGKPTGA-----------KNEVVQGLMTPFKWSAGDKYVARRGNDVISIYELPSMKLLEKKSLRAEGVHDFFWSPTDLILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMFTNFELFRLQEQLVPVEMLEIKDNIVAFAWEPKGTRFATVHGEGQQRLSVSFYDMDGENKSTKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDATEQQSITVQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQ----GKQLLEEKKESFYQFLWRPRPRTLLSDAEYKKVVKNLKKYEKRFDQMDRLKERERQAAKNAERNRKVQEFQELLQRLLAAAAVRRGEYIALLDGYDSEDENEYIVQSHTYDDVLESKEEI 693          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11372.886.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKV7_ECTSI0.000e+088.34Eukaryotic translation initiation factor 3 subunit... [more]
A0A835YNH6_9STRA8.070e-22963.10Eukaryotic translation initiation factor 3 subunit... [more]
A0A6H5KAX0_9PHAE9.330e-22278.48eIF2A domain-containing protein n=1 Tax=Ectocarpus... [more]
G5A2B4_PHYSP2.190e-17552.27Eukaryotic translation initiation factor 3 subunit... [more]
A0A8K1FRG0_PYTOL3.000e-17552.27Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4BHP4_HYAAE4.790e-17351.48Eukaryotic translation initiation factor 3 subunit... [more]
A0A5D6XPM0_9STRA5.330e-17250.68Eukaryotic translation initiation factor 3 subunit... [more]
A0A0P1APB3_PLAHL1.290e-17151.28Eukaryotic translation initiation factor 3 subunit... [more]
A0A484EF01_BRELC7.100e-17150.89Eukaryotic translation initiation factor 3 subunit... [more]
A0A3M6VP81_9STRA7.330e-17151.48Eukaryotic translation initiation factor 3 subunit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11372contigS-dermatodea_contig11372:3711..7504 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score896.3
Seed ortholog evalue6.3e-258
Seed eggNOG ortholog2880.D7FKV7
Preferred namePRT1
KEGG koko:K03253
KEGG Pathwayko03013,map03013
GOsGO:0000003,GO:0002064,GO:0002065,GO:0002066,GO:0002181,GO:0002183,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005852,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006807,GO:0007276,GO:0007281,GO:0007292,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009277,GO:0009847,GO:0009888,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010608,GO:0016032,GO:0016282,GO:0019080,GO:0019081,GO:0019222,GO:0019538,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0030312,GO:0030707,GO:0030855,GO:0031323,GO:0031326,GO:0032268,GO:0032501,GO:0032502,GO:0032504,GO:0032947,GO:0032991,GO:0033290,GO:0034248,GO:0034641,GO:0034645,GO:0035690,GO:0035770,GO:0036464,GO:0042221,GO:0042493,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043614,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0048468,GO:0048477,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051246,GO:0051704,GO:0051716,GO:0060255,GO:0060429,GO:0065007,GO:0070887,GO:0070993,GO:0071540,GO:0071541,GO:0071704,GO:0071944,GO:0075522,GO:0075525,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112
EggNOG free text desc.translation initiation factor binding
EggNOG OGsCOG5354@1,KOG2314@2759
Ec32 ortholog descriptioneukaryotic initiation factor 3b
Ec32 orthologEc-17_001520.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03012,ko03019
Hectar predicted targeting categoryother localisation
Exons11
Model size1521
Cds size1506
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11372.886.1prot_S-dermatodea_contig11372.886.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11372 3711..7489 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924200.0159392-CDS-S-dermatodea_contig11372:3710..38571622924200.0159392-CDS-S-dermatodea_contig11372:3710..3857Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11372 3711..3857 -
1694079087.4712205-CDS-S-dermatodea_contig11372:3710..38571694079087.4712205-CDS-S-dermatodea_contig11372:3710..3857Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11372 3711..3857 -
1622924200.031223-CDS-S-dermatodea_contig11372:3994..40961622924200.031223-CDS-S-dermatodea_contig11372:3994..4096Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11372 3995..4096 -
1694079087.4846497-CDS-S-dermatodea_contig11372:3994..40961694079087.4846497-CDS-S-dermatodea_contig11372:3994..4096Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11372 3995..4096 -
1622924200.0471947-CDS-S-dermatodea_contig11372:4346..44631622924200.0471947-CDS-S-dermatodea_contig11372:4346..4463Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11372 4347..4463 -
1694079087.494248-CDS-S-dermatodea_contig11372:4346..44631694079087.494248-CDS-S-dermatodea_contig11372:4346..4463Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11372 4347..4463 -
1622924200.0567944-CDS-S-dermatodea_contig11372:4819..50021622924200.0567944-CDS-S-dermatodea_contig11372:4819..5002Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11372 4820..5002 -
1694079087.5033402-CDS-S-dermatodea_contig11372:4819..50021694079087.5033402-CDS-S-dermatodea_contig11372:4819..5002Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11372 4820..5002 -
1622924200.0697682-CDS-S-dermatodea_contig11372:5213..53571622924200.0697682-CDS-S-dermatodea_contig11372:5213..5357Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11372 5214..5357 -
1694079087.512508-CDS-S-dermatodea_contig11372:5213..53571694079087.512508-CDS-S-dermatodea_contig11372:5213..5357Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11372 5214..5357 -
1622924200.0836852-CDS-S-dermatodea_contig11372:5465..56301622924200.0836852-CDS-S-dermatodea_contig11372:5465..5630Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11372 5466..5630 -
1694079087.5278714-CDS-S-dermatodea_contig11372:5465..56301694079087.5278714-CDS-S-dermatodea_contig11372:5465..5630Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11372 5466..5630 -
1622924200.0940669-CDS-S-dermatodea_contig11372:5911..59711622924200.0940669-CDS-S-dermatodea_contig11372:5911..5971Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11372 5912..5971 -
1694079087.5503953-CDS-S-dermatodea_contig11372:5911..59711694079087.5503953-CDS-S-dermatodea_contig11372:5911..5971Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11372 5912..5971 -
1622924200.1083925-CDS-S-dermatodea_contig11372:6178..63491622924200.1083925-CDS-S-dermatodea_contig11372:6178..6349Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11372 6179..6349 -
1694079087.5625532-CDS-S-dermatodea_contig11372:6178..63491694079087.5625532-CDS-S-dermatodea_contig11372:6178..6349Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11372 6179..6349 -
1622924200.119388-CDS-S-dermatodea_contig11372:6446..66161622924200.119388-CDS-S-dermatodea_contig11372:6446..6616Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11372 6447..6616 -
1694079087.5785046-CDS-S-dermatodea_contig11372:6446..66161694079087.5785046-CDS-S-dermatodea_contig11372:6446..6616Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11372 6447..6616 -
1622924200.1306317-CDS-S-dermatodea_contig11372:7083..72191622924200.1306317-CDS-S-dermatodea_contig11372:7083..7219Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11372 7084..7219 -
1694079087.5883043-CDS-S-dermatodea_contig11372:7083..72191694079087.5883043-CDS-S-dermatodea_contig11372:7083..7219Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11372 7084..7219 -
1622924200.1396801-CDS-S-dermatodea_contig11372:7378..74891622924200.1396801-CDS-S-dermatodea_contig11372:7378..7489Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11372 7379..7489 -
1694079087.6000326-CDS-S-dermatodea_contig11372:7378..74891694079087.6000326-CDS-S-dermatodea_contig11372:7378..7489Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11372 7379..7489 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924200.150482-UTR-S-dermatodea_contig11372:7489..75041622924200.150482-UTR-S-dermatodea_contig11372:7489..7504Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11372 7490..7504 -
1694079087.6116111-UTR-S-dermatodea_contig11372:7489..75041694079087.6116111-UTR-S-dermatodea_contig11372:7489..7504Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11372 7490..7504 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11372.886.1

>prot_S-dermatodea_contig11372.886.1 ID=prot_S-dermatodea_contig11372.886.1|Name=mRNA_S-dermatodea_contig11372.886.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=502bp
MWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMT
CNFEPGDKAIIVWEVLTGQMLRAFPMATTTAAVLHVKLTRASDPHRTVDG
AASLFRWSADGKYLARKGKDLISIYELPSMRLLDVKSLKAEGVSDFEWSP
KDNIIAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGD
YLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAG
DRFAVVLGDIPKLEVTFYTMKGGAGKNELQELDTLRERPFNHIYWSPMGN
ICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYAC
TAVAQPVTGSHWKAQMDNGYQLFSFQARNRGERFNEFKKDNFYQIQWRPR
PASLLTSAEKKKIVKNLRKYEKRFERDDKEKDRRKAREAMSDKIRMKMEF
RQHVAEMRQRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI
Q*
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mRNA from alignment at S-dermatodea_contig11372:3711..7504-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11372.886.1 ID=mRNA_S-dermatodea_contig11372.886.1|Name=mRNA_S-dermatodea_contig11372.886.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3794bp|location=Sequence derived from alignment at S-dermatodea_contig11372:3711..7504- (Saccorhiza dermatodea SderLu1190fm monoicous)
TGTGAGCTGTTCCTCATGTGGTCTCCTCAAGGGACCTACCTCACGACATT CCACGTGCCGGGCATTGCTCTTTGGGGGGGCGAGCAATTCGAGAAGCAGG GCCGGTTTCCTCACAAGGATGTCAAGGTGCGCTTGTATCCAAAGTGCGTA TATTATAATATATATATATTGTGATTCCTGCGTTCGGCCTTTCATTGAAA ATAAGAGCATCGCTGCGATGATACCATAGCGTTTTCTTCTGGATGCTGAA AGCAAATCCATGTCGACCTCTCATGCACATCCTAGGTGGTGGAATTCTCG CCTTGTGAGACGTACGTGATGACCTGCAACTTCGAGCCAGGGGACAAGGC CATCATCGTGTGGGAGGTTCTCACGGGCCAAATGCTTCGGGCGTTCCCCA TGGCGACTACGACAGCGGCAGGTGTACTGGTGTAGAGGCTACGGTTACCA AACTGCTGTTGTATTACAAGGGCCTCTACGAGATGCAGTGGATCGATCCC AAACAAATTGTTGAAGAGTGGACTAATGGAGCTACACCGCTGTTGGCGGT TTCCGAGCATGGTTGACTGCACGAGTCTCGAGTGCTTTTGTCGCACAAGA TATGCGATGTTTTGAAGGGATGCCCTGATAAGTACCGGGGAAAACCGGGT GCGTTCTAGTCCGGAAACGCTGACATGTTGACGGGTTTGGCGCGTTGCGT TGTAGACATCGGGCGCGCTGCGGCAAAGCTGCGTCGTGCTCAGCGTATGT ATGCATAGGTCGAAGAGGTAGGTGGTATCATTGCTGGCTTGCTGGTTGTT TGTGCCGAAATGTGGGTCACATGCTGGAGTGTTGCCGCGCCAAGCAAGGA TGAGACCGCCATTTATTTGCGCGACGACCTTACTATAGTACTCCATGTTA AACTCACCCGTGCTTCCGATCCCCACCGAACTGTAGATGGGGCTGCATCG CTGTTCCGCTGGAGTGCCGATGGGAAGTACCTGGCGCGCAAGGGCAAGGA CCTCATCTCGATCTACGAACTTCCATCCATGCGTCTGCTGGATGTCAAGT CTTTGAAGGTACACCCCTTCTGGTCATAGTGTTATCACGCAGGCTCGGAT CCTTCAGGGGGCGTTTTAAAGACCACCCGCCTTCAATTGTTCCTGCAACT GACAGGCTGAAGGTGTTTCGGACTTCGAGTGGAGCCCTAAGGACAACATT ATCGCATATTGGGCACCAGAGCAGGCCAACGCTCCGGCGCGAGTGTCAGT GGTGGAAATCCCTTCGCGCAAAGAGCTACGCCAGAAGAACCTGGTGATGG TCAGCGAGTGCCGGCTCCACTGGCAGGTAAGCACGGCCTGCTCGCGTGTT CCATTCTATAGTAGGCGTTTCGGGTTTCAGCCATACATTGCCCCAGGTTT ACAAGTTATCGCCTGCATAAACTCACTCCCGTAAGCGGTATGAATCATTT CGTCACGATGAGCTTTTGTTGTTTATGAAATCTCAGCGCCCTCGCACCTT CGCCATCTCGCATGGTCTTCATGTGCTGTTCAGGATGAGGGGGACTACTT GTGCGTGAAGGTACTGCGCCACTCGAAGTCCAAGAAGACCATGGTGAGAT TTAATCATTATTTTTTAAGGACAATCTGCATATTATATATAGTCGATTAG CCTATCCCTTCCTCTGGGCGAGGTACACGATGTAGGCGCCTCGAGTCAGC AGGGTGTCTGACCACGTTGCTGTCGGCTGTTGCCATGCCCGGACGTCCCG GTAGGACTTGACTGTGTTATGGAATCGGTGAAACATAGTATTGCAATGCG TCACGCCCTACCGGTCCAAACATGCATCTGATCGCATCTGTTTGCCCCTG TTGTTGATGTGCTGTCATATCCAGTACAACAATTTCGAGATCTTCCGCGT ACGGGAGCCGCTCGTCCCTGTTGAGACCATGGAGAAGAAGCAACAGGTGG CAGCGTTCGCGTGGGAGCCAGCTGGCGACCGATTTGCGGTGGTTCTGGGA GACATACCCAAGCTGGAGGTCACCTTCTATACCATGAAGGTGGGCTTTGA GTGCTTGTGAATTTCATGCAGTGTTGTCATACTGCCCAGTGGAGCCTGTT GTTCTAGCGAAACGCTCTTTCGCCCAATTTTGTCGCTGCTGTTTCAGGGT GGAGCGGGCAAGAACGAACTCCAAGAGCTAGACACGTTGCGAGAGCGACC GTTCAACCACATCTACTGGTCGCCGATGGGGAACATCTGCCTTCTGGCTG CAATGGGAGACGACGTGGGCCCACACAACGGACGGCTTGAGGTGTGTATT CACAGTTGTGCTTCGTTTCCAGGCGTCTCCTCTTTTTGCCAAGAAGCGAC TTTGTAACCTCGAATTACGTTGCGAGTCACGAGTGTGTCGTGCACACGAC TCGCACATCACCTACAAGGCCGTTGTCACCCCAAGAACTTCAGGCCAATT TAGCGTCCGTATAAAACACGTGCGTTGCCAACTTTGTTTTGGACCTCAAC AGTTCTACGACGTGGAGAACCAGTCAACACTGAAGCAGACTGAGCATTTC CGGTGCAACTACATCGAGTGGGATCCATCCGGAAGGTACGCGTGCACTGC CGTCGCACAACCGGTGACCGGTAGCCACTGGAAGGCTCAGATGGACAACG GCTACCAGCTCTTCTCGTTCCAGGCAAGAAATCGGGTATTTCACCTGGCG ACAGCCCCGATCGTGTGTCTGTGTACATGGCCTTAGTTAAAGTAAGAGGT GTTAAGTCACCCAGGCGGCTGCATGGTTGGCTCAGCAGAAAAACACCACT TGGACTTCGCGTGTGGCGGTCCCGTGACTTACGATTTCCCTACCTTGGGC TCAATAGTGGTTCCAATGTTGGAGCGAGGCAATACGGATATGGATATGGA TGGGGTTAAGCCAGAGATTTGCCATGGCTCTCGAGGAGGTCAGCCGCCCT ACACGTGTGCTGCCATAAAATTGTTGTCCAAGCTGAGGAAGTCGAAACTC AAAGAACGTTTTTTTTCGGATCCGCTGTACCGTATTACCAGGGCGAGAGG TTCAACGAGTTCAAGAAGGATAACTTCTACCAGATTCAATGGCGCCCTCG GCCTGCATCCCTGCTCACGTCAGCCGAGAAGAAAAAAATCGTCAAGAACC TGCGGAAGGTATGTACGCGCCCAAACGTACGCCGATGGCGTACGACCGAT ACTGCCTTCGCAATCGCTGTTGCTCGTGTGAAATTGATGGCCAGTATAGT GAGGGAATGGTCAGAAACTGTGTGACCGCAGACAGGATTCGAGGTATTAA TAGTTCGATCGTAAGTGAAGAACCGTATCATTTATTAAATCATAGTATGC TGACTCATTGCCGCGGCCCCTTCCTACTGCAAAACTATTTTCGTTCTTGC GCTACCAGTACGAGAAGCGATTCGAGAGGGACGACAAGGAAAAAGACCGC CGCAAGGCGCGGGAGGCCATGTCGGACAAGATCCGCATGAAAATGGAGTT CCGGCAGCATGTGGGTCCTGTTCCGCAATGTGTATTACAGTATATATTGG CAGGATGCGCCTGCAATTATGAACGATTCAGTAGAATCTGCAAAACTGCT TTGACTAACTTCCGTTTTGTTGATAATGCATCGCGTTGATCTCTCAGGTT GCGGAGATGAGGCAGCGTTTGGCCGGCCGCAGGCAGGAACTCGTGGACCT GCGGAATGGGTACGACTCCGACGACGAGTCGCACTACGTCGTGGATAGCA GAACGGGAGAAGTTGTGTTGTCTGTAAAGGAAGTCATTCAGTGA
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Coding sequence (CDS) from alignment at S-dermatodea_contig11372:3711..7504-

>mRNA_S-dermatodea_contig11372.886.1 ID=mRNA_S-dermatodea_contig11372.886.1|Name=mRNA_S-dermatodea_contig11372.886.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3012bp|location=Sequence derived from alignment at S-dermatodea_contig11372:3711..7504- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTGGTCTCCTCAAGGGACCTACCTCACGACATTCCACGTGCCGGGCAT
TGCTCTTTGGGGGGGCGAGCAATTCGAGAAGCAGGGCCGGTTTCCTCACA
AGGATGTCAAGATGTGGTCTCCTCAAGGGACCTACCTCACGACATTCCAC
GTGCCGGGCATTGCTCTTTGGGGGGGCGAGCAATTCGAGAAGCAGGGCCG
GTTTCCTCACAAGGATGTCAAGGTGGTGGAATTCTCGCCTTGTGAGACGT
ACGTGATGACCTGCAACTTCGAGCCAGGGGACAAGGCCATCATCGTGTGG
GAGGTTCTCACGGGCCAAATGCTTCGGGCGTTCCCCATGGCGACTACGAC
AGCGGCAGGTGGTGGAATTCTCGCCTTGTGAGACGTACGTGATGACCTGC
AACTTCGAGCCAGGGGACAAGGCCATCATCGTGTGGGAGGTTCTCACGGG
CCAAATGCTTCGGGCGTTCCCCATGGCGACTACGACAGCGGCAGTACTCC
ATGTTAAACTCACCCGTGCTTCCGATCCCCACCGAACTGTAGATGGGGCT
GCATCGCTGTTCCGCTGGAGTGCCGATGGGAAGTACCTGGCGCGCAAGGG
CAAGGACCTCATCTCGATCTACGAACTTCCATCCATGCGTCTGCTGGATG
TCAAGTCTTTGAAGTACTCCATGTTAAACTCACCCGTGCTTCCGATCCCC
ACCGAACTGTAGATGGGGCTGCATCGCTGTTCCGCTGGAGTGCCGATGGG
AAGTACCTGGCGCGCAAGGGCAAGGACCTCATCTCGATCTACGAACTTCC
ATCCATGCGTCTGCTGGATGTCAAGTCTTTGAAGGCTGAAGGTGTTTCGG
ACTTCGAGTGGAGCCCTAAGGACAACATTATCGCATATTGGGCACCAGAG
CAGGCCAACGCTCCGGCGCGAGTGTCAGTGGTGGAAATCCCTTCGCGCAA
AGAGCTACGCCAGAAGAACCTGGTGATGGTCAGCGAGTGCCGGCTCCACT
GGCAGGCTGAAGGTGTTTCGGACTTCGAGTGGAGCCCTAAGGACAACATT
ATCGCATATTGGGCACCAGAGCAGGCCAACGCTCCGGCGCGAGTGTCAGT
GGTGGAAATCCCTTCGCGCAAAGAGCTACGCCAGAAGAACCTGGTGATGG
TCAGCGAGTGCCGGCTCCACTGGCAGGATGAGGGGGACTACTTGTGCGTG
AAGGTACTGCGCCACTCGAAGTCCAAGAAGACCATGGATGAGGGGGACTA
CTTGTGCGTGAAGGTACTGCGCCACTCGAAGTCCAAGAAGACCATGTACA
ACAATTTCGAGATCTTCCGCGTACGGGAGCCGCTCGTCCCTGTTGAGACC
ATGGAGAAGAAGCAACAGGTGGCAGCGTTCGCGTGGGAGCCAGCTGGCGA
CCGATTTGCGGTGGTTCTGGGAGACATACCCAAGCTGGAGGTCACCTTCT
ATACCATGAAGTACAACAATTTCGAGATCTTCCGCGTACGGGAGCCGCTC
GTCCCTGTTGAGACCATGGAGAAGAAGCAACAGGTGGCAGCGTTCGCGTG
GGAGCCAGCTGGCGACCGATTTGCGGTGGTTCTGGGAGACATACCCAAGC
TGGAGGTCACCTTCTATACCATGAAGGGTGGAGCGGGCAAGAACGAACTC
CAAGAGCTAGACACGTTGCGAGAGCGACCGTTCAACCACATCTACTGGTC
GCCGATGGGGAACATCTGCCTTCTGGCTGCAATGGGAGACGACGTGGGCC
CACACAACGGACGGCTTGAGGGTGGAGCGGGCAAGAACGAACTCCAAGAG
CTAGACACGTTGCGAGAGCGACCGTTCAACCACATCTACTGGTCGCCGAT
GGGGAACATCTGCCTTCTGGCTGCAATGGGAGACGACGTGGGCCCACACA
ACGGACGGCTTGAGTTCTACGACGTGGAGAACCAGTCAACACTGAAGCAG
ACTGAGCATTTCCGGTGCAACTACATCGAGTGGGATCCATCCGGAAGGTA
CGCGTGCACTGCCGTCGCACAACCGGTGACCGGTAGCCACTGGAAGGCTC
AGATGGACAACGGCTACCAGCTCTTCTCGTTCCAGGCAAGAAATCGGTTC
TACGACGTGGAGAACCAGTCAACACTGAAGCAGACTGAGCATTTCCGGTG
CAACTACATCGAGTGGGATCCATCCGGAAGGTACGCGTGCACTGCCGTCG
CACAACCGGTGACCGGTAGCCACTGGAAGGCTCAGATGGACAACGGCTAC
CAGCTCTTCTCGTTCCAGGCAAGAAATCGGGGCGAGAGGTTCAACGAGTT
CAAGAAGGATAACTTCTACCAGATTCAATGGCGCCCTCGGCCTGCATCCC
TGCTCACGTCAGCCGAGAAGAAAAAAATCGTCAAGAACCTGCGGAAGGGC
GAGAGGTTCAACGAGTTCAAGAAGGATAACTTCTACCAGATTCAATGGCG
CCCTCGGCCTGCATCCCTGCTCACGTCAGCCGAGAAGAAAAAAATCGTCA
AGAACCTGCGGAAGTACGAGAAGCGATTCGAGAGGGACGACAAGGAAAAA
GACCGCCGCAAGGCGCGGGAGGCCATGTCGGACAAGATCCGCATGAAAAT
GGAGTTCCGGCAGCATTACGAGAAGCGATTCGAGAGGGACGACAAGGAAA
AAGACCGCCGCAAGGCGCGGGAGGCCATGTCGGACAAGATCCGCATGAAA
ATGGAGTTCCGGCAGCATGTTGCGGAGATGAGGCAGCGTTTGGCCGGCCG
CAGGCAGGAACTCGTGGACCTGCGGAATGGGTACGACTCCGACGACGAGT
CGCACTACGTCGTGGATAGCAGAACGGGAGAAGTTGTGTTGTCTGTAAAG
GAAGTCATTCAGTGAGTTGCGGAGATGAGGCAGCGTTTGGCCGGCCGCAG
GCAGGAACTCGTGGACCTGCGGAATGGGTACGACTCCGACGACGAGTCGC
ACTACGTCGTGGATAGCAGAACGGGAGAAGTTGTGTTGTCTGTAAAGGAA
GTCATTCAGTGA
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