mRNA_S-dermatodea_contig11356.874.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11356.874.1
Unique NamemRNA_S-dermatodea_contig11356.874.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig11356.874.1 vs. uniprot
Match: D8LND0_ECTSI (Replication factor C subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LND0_ECTSI)

HSP 1 Score: 535 bits (1378), Expect = 1.980e-179
Identity = 311/429 (72.49%), Postives = 340/429 (79.25%), Query Frame = 1
Query:    1 LRQYGAKVTGSVSSRTTYLLLGSVLDDGRAPEEGSKYKKAQQHKTKVVDEDDLFKMLRDSNPGGKSPPSELKPGAXXXXXXXXXXGEKPLVANPYA-KAAVVNPYGAKKPAVGGKXXXXXXXXAAAVGGXXGRASSGKSPAKV------VRRVVAASALGAAHSSAPGQMWVDKYKPRSSSEVIGHSGQVKKLRVWLENWERWHLGNTGVKPPTGKENPGARAALLSGVPGVGKSSTANLVAKEMGYHVMELNASDTRNKNSLSTELASVIGNQVLSFMPGGXXXXXXXXXXXXXXXFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSKVPIIAICNDRQHQKIRSLVNHCYDLRFSRPQKATIAKRVKAIATMEGMEVDENAAEMLVEANGNDIRQVLHAMQMWSRKSSKMTYMNLKGGISSIEKDK 1266
            ++QYG KVTG+VSSRT +L+LG+VLDDGR PEEGSKYK+A   KT+++DED LFKMLRDSNP G+ PP       XXXXXXXX    KP VANPY  K AVVNPY A   A   K        AA + G  G+A +GKSPA               +   AA    PGQMWVDKYKP SSS VIGH+GQVKKL+VWL+NWE WHL   G K PTGK+NPGARAALLSGVPGVGKSSTA LVA+EMGYHVMELNASDTR+K SLS ELASVIGN+VLSF   GXXXXXXXX       FRKQLVVMDEVDGMGGSDRGGIQELILLIKKS+VPIIAICNDRQHQKIRSLVNHCYDLRF+RPQK TIAKRVKA+A MEGM+VD+NAAEMLVEANGNDIRQVLHA+QMWSRKSSKMTYMNLKGGIS+IEKDK
Sbjct:  280 IKQYGGKVTGAVSSRTHFLVLGTVLDDGRPPEEGSKYKRAMVMKTRIIDEDGLFKMLRDSNPKGQQPPGXXX---XXXXXXXXAPASKPAVANPYQPKKAVVNPY-ASMQAAAKKKAAVNPFGAAVIAGGKGKAPAGKSPAGTSXXXXXXXXXXXGARAAAAVRQNPGQMWVDKYKPTSSSGVIGHAGQVKKLKVWLQNWEGWHL--KGAKAPTGKDNPGARAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANGXXXXXXXXG------FRKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRKSSKMTYMNLKGGISAIEKDK 696          
BLAST of mRNA_S-dermatodea_contig11356.874.1 vs. uniprot
Match: A0A1R2D148_9CILI (Replication factor C subunit 1 n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2D148_9CILI)

HSP 1 Score: 265 bits (677), Expect = 3.750e-77
Identity = 164/431 (38.05%), Postives = 236/431 (54.76%), Query Frame = 1
Query:    1 LRQYGAKVTGSVSSRTTYLLLGSVLDDGRAPEEGSKYKKAQQHKTKVVDEDDLFKMLRDSNPGGKSPPSELKPGAXXXXXXXXXXGEKPLVANPYAKAAVVNPYGAKKPAVGGKXXXXXXXXAAAVGGXXGRASSGKSPAKVVRRVVAASALGAAHSSAPGQMWVDKYKPRSSSEVIGHSGQVKKLRVWLENWERWHLGNTGVKPPT----GK----ENPGARAALLSGVPGVGKSSTANLVAKEMGYHVMELNASDTRNKNSLSTELASVIGNQVLSFMPGGXXXXXXXXXXXXXXXFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSKVPIIAICNDRQHQKIRSLVNHCYDLRFSRPQKATIAKRVKAIATMEGMEVDENAAEMLVEANGNDIRQVLHAMQMWSRKSSKMTYMNLKGGISSIEKDKV 1269
            +++YG KVTG+VS +TTYL+ G  L+DGR    G+KYKKA++  T ++DEDD+ KML +     KS  SE+   +            K  + N       +NP   KK +V  +                                               ++W DKYKP+S  ++IG++  ++KL+ WL++WE   L N  +KP +    GK    +N  A A LLSG PG+GK++ A LVA   GY VMELNASDTRNK++L   L S   +  L+                      K L++MDE+DGM G DRGG   LI +IK +K+PII ICNDRQ  K++SL+N+CYDL+F++P K  + KR+  I  +EG++++ NA E +VE++GNDIRQVL A  MW+R +S M+YM  K  + ++ KD+V
Sbjct:  207 IKEYGGKVTGNVSRKTTYLIHGYKLEDGREYTAGNKYKKAKELGTHILDEDDIKKMLEECQEMKKSEISEIDEESDHFQL-------KTTLKNDIVNK--INPVQTKKFSVEDQKLT--------------------------------------------ELWTDKYKPKSLDDMIGNTSIIQKLQEWLDDWESVVLNNN-IKPQSPSRNGKNDASKNLNAAAVLLSGPPGIGKTTAARLVANLYGYRVMELNASDTRNKSALLNPLLSSSKSHCLT----------------NKGDIVKNLIIMDEIDGMSGGDRGGTTALIQVIKTTKIPIICICNDRQSPKVKSLLNYCYDLKFAKPNKLQVVKRINDILKIEGLDIEPNAIEFVVESSGNDIRQVLTAFDMWARTNSGMSYMKAKQNLKTMGKDQV 567          
BLAST of mRNA_S-dermatodea_contig11356.874.1 vs. uniprot
Match: A0A1Z5JWY4_FISSO (Replication factor C subunit 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWY4_FISSO)

HSP 1 Score: 265 bits (677), Expect = 1.700e-76
Identity = 169/430 (39.30%), Postives = 236/430 (54.88%), Query Frame = 1
Query:    1 LRQYGAKVTGSVSSRTTYLLLGSVLDDGRAPEEGSKYKKAQQHKTKVV--DEDDLFKMLRDSNPGGKSPPSELKPGAXXXXXXXXXXGEKPLVANPYAKAAV---VNPYGAKKPAVGGKXXXXXXXXAAAVGGXXGR--ASSGKSPAKVVRRVVAASALGAAHSSAPGQMWVDKYKPRSSSEVIGHSGQVKKLRVWLENWERWHLGNTGVKPPTGKENPGARAALLSGVPGVGKSSTANLVAKEMGYHVMELNASDTRNKNSLSTELASVIGNQVLSFMPGGXXXXXXXXXXXXXXXFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSKVPIIAICNDRQHQKIRSLVNHCYDLRFSRPQKATIAKRVKAIATMEGMEVDENAAEMLVEANGNDIRQVLHAMQMWSRKSSKMTYMNLKGGISSIEKDKV 1269
            ++  G +VT +VSS+T YL++G+VL+DGR  ++GSKYKKA + K+ V+   E+  + +L+  +           P                + +NPY+ A     VNPY AKK +            A A     GR  A +  S       +  A  LG   S     +WVDKYKP S+ E++G+   VKKL  WL +WER               N   +AALLSG PG+GK++TA LVAKE G  V+E NASD R+K +L+     + G+Q + F                    +K+ ++MDEVDGMG  DR G+ ELI +IKKSKVPI+ ICNDRQ QK++SL+ +C DLR+ RP K  IA R   +   EG+ V++NAAE L E+ GNDIRQVL+ +QMWSRK + + + +LK   + I KD +
Sbjct:  214 VKTLGGRVTTAVSSKTDYLVVGNVLEDGRDYQQGSKYKKAMELKSVVIVRGEELFYGLLQTYH-------DLCGPVVAPAVASTLVSAPPSVPSNPYSTATAATKVNPY-AKKAS--------NPYAATAKANSYGRKAAPAMTSVTSNTTTMAVAPVLGDTSS----MLWVDKYKPTSAREILGNQDAVKKLTQWLNSWERIFNTTQNSNKTFSAPNGPWKAALLSGPPGIGKTTTATLVAKEAGRDVLEFNASDVRSKKALTNVFGDITGSQTIDFTTQA----------------KKRCIIMDEVDGMGAGDRSGMAELIQMIKKSKVPIVCICNDRQSQKLKSLIPYCLDLRYRRPTKNVIANRAVQVGQQEGLNVEQNAAEALAESCGNDIRQVLNCLQMWSRKGNSLKFKDLKERANDINKDDI 607          
BLAST of mRNA_S-dermatodea_contig11356.874.1 vs. uniprot
Match: B5Y507_PHATC (Replication factor C subunit 1 n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y507_PHATC)

HSP 1 Score: 263 bits (673), Expect = 6.560e-76
Identity = 172/443 (38.83%), Postives = 235/443 (53.05%), Query Frame = 1
Query:    1 LRQYGAKVTGSVSSRTTYLLLGSVLDDGRAPEEGSKYKKAQQHKTKVVD-EDDLFKMLRDSNPGGKSPPSELKPG-AXXXXXXXXXXGEKPLVANPYAKAAV---------------VNPYGAKKPAVGGKXXXXXXXXAAAVGGXXGRASSGKSPAKVVRRVVAASALGAAHSSAPGQMWVDKYKPRSSSEVIGHSGQVKKLRVWLENWERWHLGNTGVKPPTGKENPGARAALLSGVPGVGKSSTANLVAKEMGYHVMELNASDTRNKNSLSTELASVIGNQVLSFMPGGXXXXXXXXXXXXXXXFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSKVPIIAICNDRQHQKIRSLVNHCYDLRFSRPQKATIAKRVKAIATMEGMEVDENAAEMLVEANGNDIRQVLHAMQMWSRKSS---KMTYMNLKGGISSIEKDKV 1269
            ++  G ++TG+VSS T YL++G  L+DGR   EGSKYK+A Q  T +V  E+  + +L+  N        E+  G A           E PL ANPYAK A                  PY + KP                            SPA++   V     + A  SS    +WVDKYKP  S E++G++  VKKL +WL +WE+    +  V       N   +AALLSG PG+G +    +VAKE G  V+E NASD R+K ++  ++  + G+  L F                     K+ ++MDEVDGMG  DR G+ ELI +IKKS+VPII ICNDRQ QK++SL+ +C DLR+ RP K+ IA R   IA  EG  V++NAAE + E+ GND+RQVL+ MQMW+  SS   +MTY +LK   SSI KD++
Sbjct:  224 VKTLGGRITGAVSSLTNYLVVGEELEDGRVYTEGSKYKRAVQEGTHIVQGEEAFYGLLQQYND------KEIAAGNALLNTAPKLSQSEAPLAANPYAKKAPNXXXXXXXXXXXXVKAKPYTSGKP----------------------------SPAEISSPVD----IKADRSSGANLLWVDKYKPTRSGEILGNAESVKKLGLWLSSWEQKFNNSKAVGKGVANPNDRFKAALLSGPPGIGTT----IVAKESGRDVIEFNASDVRSKKAIKDDMGDITGSYTLEFGKPAINEKRQSSRI-------KRCIIMDEVDGMGAGDRSGMSELIQMIKKSRVPIICICNDRQSQKMKSLLPYCMDLRYRRPTKSVIANRAVRIAAQEGFTVEQNAAEAIAESCGNDVRQVLNCMQMWASDSSSESRMTYKDLKQRESSINKDEI 617          
BLAST of mRNA_S-dermatodea_contig11356.874.1 vs. uniprot
Match: A0A835YT94_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT94_9STRA)

HSP 1 Score: 257 bits (657), Expect = 1.920e-75
Identity = 142/286 (49.65%), Postives = 178/286 (62.24%), Query Frame = 1
Query:  469 SSAPGQMWVDKYKPRSSSEVIGHSGQVKKLRVWLENWERWHLGNTGVKPPTGKENPG----ARAALLSGVPGVGKSSTANLVAKEMGYHVMELNASDTRNKNSLSTELASVIGNQVLSFMPGGXXXXXXXXXXXXXXXFRKQLVVMDEVDGMGGSDRGG----------------IQELILLIKKSKVPIIAICNDRQHQKIRSLVNHCYDLRFSRPQKATIAKRVKAIATMEGMEVDENAAEMLVEANGNDIRQVLHAMQMWSRKSSKMTYMNLKGGISSIEKDK 1266
            SS PGQ+W DKY+P+  S+++GH+G V+KL  WL N+E        VK   GK   G     RA L+SG PG+GK++ A +VAK +G+ V E NASDTR+K S+   L  V+ N VLSF                     K++++MDEVDGMGG DRGG                + ELI LI  +KVPII ICNDRQ  KIRSLVNHC D+RF RP K  IAKR+K +A  EG+++D NAAEML E+ GNDIRQ LHAMQMWSR S  M YM +K G+ ++ KDK
Sbjct:   43 SSEPGQLWADKYRPQKPSDLLGHTGDVRKLTEWLNNFEA--RAAPAVKGAKGKGKAGDDMHKRAVLISGPPGIGKTTAATIVAKSLGFEVTEFNASDTRSKKSMEEGLKDVLSNTVLSFGSKAGSKPP------------KRVIIMDEVDGMGGGDRGGRNVAEADVQMRLLARSMGELIKLIAITKVPIICICNDRQDTKIRSLVNHCIDMRFKRPVKTMIAKRMKEVAQKEGLDIDLNAAEMLSESVGNDIRQCLHAMQMWSRGSRTMAYMEVKDGLGAVSKDK 314          
BLAST of mRNA_S-dermatodea_contig11356.874.1 vs. uniprot
Match: A0A7S3JSX2_9STRA (Replication factor C subunit 1 (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSX2_9STRA)

HSP 1 Score: 259 bits (662), Expect = 2.990e-75
Identity = 161/409 (39.36%), Postives = 224/409 (54.77%), Query Frame = 1
Query:    1 LRQYGAKVTGSVSSRTTYLLLGSVLDDGRAPEEGSKYKKAQQHKTKVVDE-DDLFKMLRDSNPGGKSPPSELKPGAXXXXXXXXXXGEKPLVANPYAKAAVVNPYGAKKPAVGGKXXXXXXXXAAAVGGXXGRASSGKSPAKVVRRVVAASAL--GAAHSSAPGQMWVDKYKPRSSSEVIGHSGQVKKLRVWLENWERWHLG--NTGVKPPTGKENPGARAALLSGVPGVGKSSTANLVAKEMGYHVMELNASDTRNKNSLSTELASVIGNQVLSFMPGGXXXXXXXXXXXXXXXFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSKVPIIAICNDRQHQKIRSLVNHCYDLRFSRPQKATIAKRVKAIATMEGMEVDENAAEMLVEANGNDIRQVLHAMQMWSRKSS 1212
            ++  G +V+GSVS +T +L++G++L+DGR+ EEG K+K A + K  ++   + L   + +     +S PSE                                                         G  G+    KS  + V    A S+   G+       ++W D+YKP+S+ +V+G+   VKKLR +LENWE+ HLG  +   K    KENP A+AALLSG PG+GK++ A+L+AKE GY V+ELNASD R+K SL+ +L   +    L F                     K+L++MDEVDG+ GSDRGG QELI LIK S+VPII ICNDRQ  K++ L N C+DLR  RP K TIAKR+  IA  EG++++ NAAE+L E  GNDIRQ L+A+QMWS + S
Sbjct:  142 IKSLGGRVSGSVSGKTNFLVVGTLLEDGRSVEEGRKFKDAIERKVTIIRGWEKLVDTVEEMRKKRQSKPSE---------------------------------------------------------GSLGKLGLTKSKKRKVGSSTAPSSSMSGSGIERIENELWADRYKPKSTKDVLGNGEVVKKLRSFLENWEKVHLGPESKRKKLVPSKENPNAKAALLSGPPGIGKTTLAHLIAKEHGYDVLELNASDARSKKSLTEQLGGTLDCPTLKF-----------GAINAKDMTTKRLLIMDEVDGLSGSDRGGSQELIRLIKISRVPIICICNDRQSNKVKGLANSCFDLRCKRPMKQTIAKRIVLIANKEGLDLEANAAELLAENCGNDIRQCLNALQMWSTELS 482          
BLAST of mRNA_S-dermatodea_contig11356.874.1 vs. uniprot
Match: A0A7J6DII2_9TELE (Replication factor C subunit 1 n=1 Tax=Onychostoma macrolepis TaxID=369639 RepID=A0A7J6DII2_9TELE)

HSP 1 Score: 258 bits (658), Expect = 5.250e-73
Identity = 172/434 (39.63%), Postives = 236/434 (54.38%), Query Frame = 1
Query:    1 LRQYGAKVTGSVSSRTTYLLLGSVLDDGRAPEEGSKYKKAQQHKTKVVDEDDLFKMLRDSNPGGKSPPSELKPGAXXXXXXXXXXGEKPLVANPYAKAAVVNPYGAKKPAVGGKXXXXXXXXAAAVGGXXGRASSGKSPAKVVRRVVAASALGAAHSSAPGQMWVDKYKPRSSSEVIGHSGQ---VKKLRVWLENWERWHLGNTGVKPPTGK--------ENPGARAALLSGVPGVGKSSTANLVAKEMGYHVMELNASDTRNKNSLSTELASVIGN-QVLSFMPGGXXXXXXXXXXXXXXXFRKQLVVMDEVDGMGGS-DRGGIQELILLIKKSKVPIIAICNDRQHQKIRSLVNHCYDLRFSRPQKATIAKRVKAIATMEGMEVDENAAEMLVEANGNDIRQVLHAMQMWSRKSSKMTYMNLKGGISSIEKD 1263
            + +YG KVTG+VS +TTYL+LG   D G      SK +KA+   TK+++ED+LF ++R + PG KS   E+   A            +     P  KA    P   K+  + GK        +  +G          S  +  R    + ++  +  S+   +WVDKY+PRS   +IG  G      KL  WL+NW + H GNT  K PT K        +  G +AALLSG PGVGK++TA LV +E+GY  +E+NAS TR+KNSL   +A  + N  + +F  G                  K +++MDEVDGM G+ DRGGIQE+I LIK+SK+PII +CNDR HQKIRSL N+CYDLRF RP+   I   V +IA  EG+++   A   ++ A+  DIRQVLH + MWS K   MTY   K    + +KD
Sbjct:  423 IERYGGKVTGNVSRKTTYLVLGR--DSG-----ASKTEKAESFGTKIINEDELFDLIR-TKPGKKSK-YEIAAEAENKSSKTRTPNSRGKPTPPSKKATPQGPSPNKRSPLEGKSKPGSASKSGTLGASRSEVKKSLSFDQSKRASPVSHSIPESEGSS--LLWVDKYRPRSLKNLIGQQGDQSCANKLLRWLQNWHKHHSGNT--KAPTAKFGKFGSKDDGSGFKAALLSGPPGVGKTTTAALVCEELGYSYVEMNASCTRSKNSLKEVIAESLNNTSIKNFYSGASQTVSS-----------KHVLIMDEVDGMAGNEDRGGIQEMIGLIKQSKIPIICMCNDRNHQKIRSLANYCYDLRFQRPRVEQIKGAVMSIAFKEGLKIPPPALNEVILASNQDIRQVLHNLSMWSAKDKVMTYDQAKADAKNAKKD 832          
BLAST of mRNA_S-dermatodea_contig11356.874.1 vs. uniprot
Match: A0A6P6JJV5_CARAU (Replication factor C subunit 1 n=12 Tax=Cyprininae TaxID=2743694 RepID=A0A6P6JJV5_CARAU)

HSP 1 Score: 256 bits (655), Expect = 1.340e-72
Identity = 175/435 (40.23%), Postives = 238/435 (54.71%), Query Frame = 1
Query:    1 LRQYGAKVTGSVSSRTTYLLLGSVLDDGRAPEEGSKYKKAQQHKTKVVDEDDLFKMLRDSNPGGKSPPSELKPGAXXXXXXXXXXGEKPLVANPYAKAAVVNPYGAKKPAVGGKXXXXXXXXAAAVGGXXGRASSGKSPAKVVRRV-VAASALGAAHSSAPGQMWVDKYKPRSSSEVIGHSGQ---VKKLRVWLENWERWHLGNTGVKPPTGK--------ENPGARAALLSGVPGVGKSSTANLVAKEMGYHVMELNASDTRNKNSLSTELASVIGN-QVLSFMPGGXXXXXXXXXXXXXXXFRKQLVVMDEVDGMGGS-DRGGIQELILLIKKSKVPIIAICNDRQHQKIRSLVNHCYDLRFSRPQKATIAKRVKAIATMEGMEVDENAAEMLVEANGNDIRQVLHAMQMWSRKSSKMTYMNLKGGISSIEKD 1263
            + +YG KVTG+VS +TTYL+LG   D G      SK +KA+   TK+++ED+L  ++R + PG KS   E+   A            +     P  KA    P   K+   GGK        + A+G          S  +  R   V+ S  G+  SS    +WVDKY+PRS   +IG  G      KL  WL+NW + H GNT  K P+ K        +  G +AALLSG PGVGK++TA LV +E+GY  +E+NAS TR+KNSL   +A  + N  + +F  G                  K +++MDEVDGM G+ DRGGIQE+I LIK+SK+PII +CNDR HQKIRSL N+CYDLRF RP+   I   + +IA  EG+++   A   ++ A+  DIRQVLH + MWS K   MTY   K   ++ +KD
Sbjct:  421 IERYGGKVTGNVSRKTTYLVLGR--DSGV-----SKTEKAESFGTKIINEDELLDLIR-TKPGKKSK-YEIAAEAENKSSKTRTPDSRGKPTTPSNKATPQGPSPNKRSTSGGKSKPGSASKSGALGASRSEVKKSLSFDQSKRASPVSHSTPGSEGSSL---LWVDKYRPRSLKNLIGQQGDQSCANKLLRWLQNWHKHHSGNT--KAPSAKFGKFGSKDDGSGFKAALLSGPPGVGKTTTAALVCEELGYSYVEMNASCTRSKNSLKEVIAESLNNTSIKNFYSGASQTVSS-----------KHVLIMDEVDGMAGNEDRGGIQEMIGLIKQSKIPIICMCNDRNHQKIRSLANYCYDLRFQRPRVEQIKGAIMSIAFKEGLKIPPPALNEVILASNQDIRQVLHNLSMWSAKDKVMTYDQAKADANNAKKD 830          
BLAST of mRNA_S-dermatodea_contig11356.874.1 vs. uniprot
Match: F0XZ23_AURAN (AAA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ23_AURAN)

HSP 1 Score: 249 bits (637), Expect = 1.850e-72
Identity = 129/269 (47.96%), Postives = 179/269 (66.54%), Query Frame = 1
Query:  487 MWVDKYKPRSSSEVIGHSGQVKKLRVWLENWERWHLGNTGV--KPPTGKENPGARAALLSGVPGVGKSSTANLVAKEMGYHVMELNASDTRNKNSLSTELASVIGNQVLS--FMPGGXXXXXXXXXXXXXXXFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSKVPIIAICNDRQHQKIRSLVNHCYDLRFSRPQKATIAKRVKAIATMEGMEVDENAAEMLVEANGNDIRQVLHAMQMWSRKSSKM---TYMNLKGGISSIEKDKVR 1272
            +W D++KP+S  +++G+    KKL +WL++WE+ HLG+     KP   KENPGA+AALLSG PG+GKSS A L+    G+ V+ELNASDTR+  ++   L   +G QV+S  F   G                 +++V+MDE+DG+ GSDRGG Q L+ LIK S  PII ICNDRQ  K+++L NHC+DLRF RP K TIAKRV AIA  EG+ +++NAAE+LVE+ GNDIRQ L+A+QMW+    +    +Y  +K  +S+I KD ++
Sbjct:  122 LWADRHKPKSQKDILGNGDVCKKLGLWLDDWEKVHLGDEKKRKKPAFAKENPGAKAALLSGPPGIGKSSMAALLCAARGFDVVELNASDTRSARTVEETLGDALGCQVVSSSFAKKGAAPPSKKRL--------RRVVIMDEIDGLSGSDRGGSQALVKLIKSSSTPIICICNDRQSAKVKTLANHCFDLRFKRPMKVTIAKRVMAIAMKEGLTIEQNAAELLVESCGNDIRQCLNALQMWATSEGEAETCSYTAMKDRLSTISKDAIQ 382          
BLAST of mRNA_S-dermatodea_contig11356.874.1 vs. uniprot
Match: A0A7S3VAW2_9STRA (Replication factor C subunit 1 n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VAW2_9STRA)

HSP 1 Score: 254 bits (648), Expect = 4.470e-72
Identity = 180/465 (38.71%), Postives = 250/465 (53.76%), Query Frame = 1
Query:    1 LRQYGAKVTGSVSSRTTYLLLGSVLDDGRAPEEGSKYKKAQQHKTKVV---------------DE------DDLFKMLRDSNPGGKSPPSELK-----PGAXXXXXXXXXXGEKPLVANPYAKAA-----VVNPYGAKKPAVGGKXXXXXXXXAAAVGGXXGRASSGKSPAKVVRRVVAASALGAAHSSAP--GQMWVDKYKPRSSSEVIGHSGQVKKLRVWLENWER-WHLGNTGVKPPTGKENPGAR-AALLSGVPGVGKSSTANLVAKEMGYHVMELNASDTRNKNSLSTELASVIGNQVLSFMPGGXXXXXXXXXXXXXXXFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSKVPIIAICNDRQHQKIRSLVNHCYDLRFSRPQKATIAKRVKAIATMEGMEVDENAAEMLVEANGNDIRQVLHAMQMWSR-------KSSKMTYMNLKGGISSIEKDKV 1269
            ++  G +VT +VS +T YL+ G++L+DGR   EGSKYKKA +   KVV               DE      DDL     D      +   ELK     P +               + NPYAK+A     V NPY + +    G           ++  XX  + S K+ + +  +    S  G   ++      +W DKY P S+  ++G++  VKKLRVWL  WER W+  ++  K  +  +  G + AALLSG PG+GK++TA LVA+E G  V+ELNASD R++ +L + L  VIG+QVLSF                    +++ ++MDEVDGMG  DRGGI+ LI +IK SKVPII ICNDRQ QKIRSL  +C DL++ RP K+ IA+R   +   EGM ++ NAAE + E+ GNDIRQVL+ +QMWS        K + MTY + K   S I KD++
Sbjct:  237 VKNVGGRVTTAVSGKTNYLVTGNILEDGRDVCEGSKYKKATELSKKVVILDGEGELYMLAKMMDEKKGKTVDDLNNESNDVECENHTKEPELKTSLRNPYSNAVSSKASNPYAAIKITNPYAKSASSNSKVSNPYASSR----GISNPYKKESVTSIXXXXXXSPSVKNTSSLSSQSSQPSCSGGGRANIKDANALWADKYAPDSTRMILGNAEAVKKLRVWLSGWEREWNKTSSAGKKRSLTQKGGIKKAALLSGPPGIGKTTTAVLVAQEGGRQVLELNASDARSQKTLDSSLGGVIGSQVLSF--------DDPEANGRKVESKRRCIIMDEVDGMGQGDRGGIKGLIEMIKVSKVPIICICNDRQSQKIRSLEPYCLDLKYRRPVKSVIARRALEVGKAEGMSIEYNAAEAVAESCGNDIRQVLNCLQMWSNSKRLSTEKKAPMTYRDYKSRDSLINKDEM 689          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11356.874.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LND0_ECTSI1.980e-17972.49Replication factor C subunit 1 n=2 Tax=Ectocarpus ... [more]
A0A1R2D148_9CILI3.750e-7738.05Replication factor C subunit 1 n=1 Tax=Stentor coe... [more]
A0A1Z5JWY4_FISSO1.700e-7639.30Replication factor C subunit 1 n=2 Tax=Fistulifera... [more]
B5Y507_PHATC6.560e-7638.83Replication factor C subunit 1 n=1 Tax=Phaeodactyl... [more]
A0A835YT94_9STRA1.920e-7549.65P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S3JSX2_9STRA2.990e-7539.36Replication factor C subunit 1 (Fragment) n=1 Tax=... [more]
A0A7J6DII2_9TELE5.250e-7339.63Replication factor C subunit 1 n=1 Tax=Onychostoma... [more]
A0A6P6JJV5_CARAU1.340e-7240.23Replication factor C subunit 1 n=12 Tax=Cyprininae... [more]
F0XZ23_AURAN1.850e-7247.96AAA domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A7S3VAW2_9STRA4.470e-7238.71Replication factor C subunit 1 n=2 Tax=Chaetoceros... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11356contigS-dermatodea_contig11356:120..7119 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score540.8
Seed ortholog evalue5.7e-151
Seed eggNOG ortholog2880.D8LND0
KEGG koko:K10754
KEGG Pathwayko03030,ko03420,ko03430,map03030,map03420,map03430
KEGG ModuleM00289,M00295
GOsGO:0000278,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005657,GO:0005663,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006272,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007049,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0022616,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044446,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360,GO:1901576
EggNOG free text desc.DNA clamp loader activity
EggNOG OGsCOG5275@1,KOG1968@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03032,ko03400
Hectar predicted targeting categoryother localisation
Exons8
Model size1272
Cds size1272
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11356.874.1prot_S-dermatodea_contig11356.874.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11356 120..7119 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924199.1043422-CDS-S-dermatodea_contig11356:119..2181622924199.1043422-CDS-S-dermatodea_contig11356:119..218Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11356 120..218 -
1694079086.8058336-CDS-S-dermatodea_contig11356:119..2181694079086.8058336-CDS-S-dermatodea_contig11356:119..218Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11356 120..218 -
1622924199.1139042-CDS-S-dermatodea_contig11356:443..6001622924199.1139042-CDS-S-dermatodea_contig11356:443..600Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11356 444..600 -
1694079086.8163166-CDS-S-dermatodea_contig11356:443..6001694079086.8163166-CDS-S-dermatodea_contig11356:443..600Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11356 444..600 -
1622924199.1221547-CDS-S-dermatodea_contig11356:1907..21221622924199.1221547-CDS-S-dermatodea_contig11356:1907..2122Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11356 1908..2122 -
1694079086.8246412-CDS-S-dermatodea_contig11356:1907..21221694079086.8246412-CDS-S-dermatodea_contig11356:1907..2122Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11356 1908..2122 -
1622924199.1303537-CDS-S-dermatodea_contig11356:3397..35771622924199.1303537-CDS-S-dermatodea_contig11356:3397..3577Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11356 3398..3577 -
1694079086.8344994-CDS-S-dermatodea_contig11356:3397..35771694079086.8344994-CDS-S-dermatodea_contig11356:3397..3577Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11356 3398..3577 -
1622924199.1396096-CDS-S-dermatodea_contig11356:4307..44841622924199.1396096-CDS-S-dermatodea_contig11356:4307..4484Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11356 4308..4484 -
1694079086.8432453-CDS-S-dermatodea_contig11356:4307..44841694079086.8432453-CDS-S-dermatodea_contig11356:4307..4484Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11356 4308..4484 -
1622924199.1511412-CDS-S-dermatodea_contig11356:5376..55561622924199.1511412-CDS-S-dermatodea_contig11356:5376..5556Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11356 5377..5556 -
1694079086.8507085-CDS-S-dermatodea_contig11356:5376..55561694079086.8507085-CDS-S-dermatodea_contig11356:5376..5556Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11356 5377..5556 -
1622924199.1589742-CDS-S-dermatodea_contig11356:6317..64771622924199.1589742-CDS-S-dermatodea_contig11356:6317..6477Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11356 6318..6477 -
1694079086.8584516-CDS-S-dermatodea_contig11356:6317..64771694079086.8584516-CDS-S-dermatodea_contig11356:6317..6477Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11356 6318..6477 -
1622924199.1707087-CDS-S-dermatodea_contig11356:7015..71191622924199.1707087-CDS-S-dermatodea_contig11356:7015..7119Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11356 7016..7119 -
1694079086.8692713-CDS-S-dermatodea_contig11356:7015..71191694079086.8692713-CDS-S-dermatodea_contig11356:7015..7119Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11356 7016..7119 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11356.874.1

>prot_S-dermatodea_contig11356.874.1 ID=prot_S-dermatodea_contig11356.874.1|Name=mRNA_S-dermatodea_contig11356.874.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=424bp
LRQYGAKVTGSVSSRTTYLLLGSVLDDGRAPEEGSKYKKAQQHKTKVVDE
DDLFKMLRDSNPGGKSPPSELKPGAAGGAAAAAAGGEKPLVANPYAKAAV
VNPYGAKKPAVGGKAAVVNPYGAAAVGGGGGRASSGKSPAKVVRRVVAAS
ALGAAHSSAPGQMWVDKYKPRSSSEVIGHSGQVKKLRVWLENWERWHLGN
TGVKPPTGKENPGARAALLSGVPGVGKSSTANLVAKEMGYHVMELNASDT
RNKNSLSTELASVIGNQVLSFMPGGGGGGSKGGGGAKGGGFRKQLVVMDE
VDGMGGSDRGGIQELILLIKKSKVPIIAICNDRQHQKIRSLVNHCYDLRF
SRPQKATIAKRVKAIATMEGMEVDENAAEMLVEANGNDIRQVLHAMQMWS
RKSSKMTYMNLKGGISSIEKDKVR
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mRNA from alignment at S-dermatodea_contig11356:120..7119-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11356.874.1 ID=mRNA_S-dermatodea_contig11356.874.1|Name=mRNA_S-dermatodea_contig11356.874.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7000bp|location=Sequence derived from alignment at S-dermatodea_contig11356:120..7119- (Saccorhiza dermatodea SderLu1190fm monoicous)
CTCCGCCAGTACGGAGCCAAGGTGACGGGCTCGGTGAGCAGCAGGACGAC GTACCTGCTGCTGGGATCTGTGCTGGATGACGGCCGAGCGCCGGAGGAGG GAAGGTGGGCCTGTACAAGGGGGCGGGGGGGGCGGGAACTGTCTGCTTCG GCTTCGTTGGCTGGTTTTTCGTTACGTTTTGCTTGCTACGCGGTACTGTT CGTCGTCGTGCTACGTCCGCCCTCGGTGCCTCTGGCGTCCTCTGTTTTGG TGCTTGGCCCGTACGATACCAAAGGTCGCGTATGTTCGGAAGGGTGAAAG CCGAACCAGCCTTGTGAGGTGGCGGCGGCGGAGGCGGTTGGTTTCGTGGC CGAGGGTGACGGTTGGCGGCAGCTGGGAGCGAAAGTGTTGTGTGCCTCTA CTGCTGCTGTAGTTTTGCGTTGCTGTCCAGTGAAACCTCCTTCTGTGACT TGCACGCGATCAACATGCTGCCACTATCTTACCGGGGGGGGGGGGGGGGA TATTTCGTTAACACTCTCTCTCTCTTTCTCTCTCTCTCCGCCTGTATTTG TTTCGCGCTGTTGGCCCACGAACCGCGTCCTCCCGACCGCCCGATCCGTC GATCGCTTCACCGATACGACACGCCCCTCACACCAACGACAGCAAATACA AGAAGGCCCAGCAGCACAAGACCAAGGTCGTCGATGAGGATGACCTCTTC AAGATGCTGAGGGACTCCAACCCCGGCGGCAAGTCGCCGCCATCGGAGTT GAAGCCGGGGGCAGCTGGGGGCGCGGCGGCGGCGGCGGCTGGAGGAGAGA AAGTGGCGACAGCCACCAAGGCCGCTGGAAAGGTGCGACCCCCCGCGCTC GCTTTGGTTGTGGACACAGGGGAGCTCTGCGTTGAGCAGGCTTTCGCGTT AGATGTGCTTGTGCTTGTGGCGGCTGTTACTGTCGTTGCCCGGGCGCGGT GAAGATTAAGTGTTGGCCGTGTGCATTGTTTGATGTGGTCGATAAAAAAA ATGACAGATGCTCGGGTGCGCAGTCATTCGGGAGAGTGAGACACGCTTGC GGCTCAAGCCTTTTGGCACGATGATGCTGCTGCTACATCGGCACGGCAGT TTCTCGTTTGACGTTTTTTACTCTCGGTTAGGGGTGTCCACGTCGCATGA AGGCTTGACTCCACGTTTGAAAAAAAATCCAACAAATAGGCTCGGGTGAC TTGTCGCCAGCGGCACTGGTTGGCGGGTATCTCCTGTACAGAGCGATGGC GTTCTCCAGAGGAAACGAACCACCACTGGTTAACCCCCGGCCGTCCGCCA GAGCTTGCGCTAGATACCGTTGTCCACCCCCCATGGATGCCCAGCTTCCT GCCTCCGGCGAATCTCTATGGGTCCCAATTTCGGCAGAATCCGAATGAAA GCGAAACCGCCGCGCACGTACTACATTAGCGTGCAGCGAAGTGCAGGGTA TCGCGAAGAGGCCTGGCGTGCCCTTGTCCATCCCGCGTTCGCACCCGCAA TGGCAGCCCCCCCCCCTCCCCCCCCCCTCCCGCGCGCCCGCGCGTTCTTG TCCCCGCTATCAGCCGCTAGTGGCGAACCCGTACGCGAAGGCGGCGGTGG TGAACCCCTACGGTGCCAAGAAACCCGCCGTCGGCGGTAAGGCTGCCGTC GTGAATCCGTACGGGGCTGCGGCGGTGGGGGGCGGGGGCGGAAGGGCGTC GAGCGGGAAGTCTCCGGCGAAGGTGGTGAGAAGGGTGGTGGCGGTTTGCG GGAGAAGTAGCGGCCGGCGATTGCGGTTTGCGTGCGTGGGGACTGTGAGG GGAAGGCGGTTATTTTTCGTCGTCGCTTGTTTTGGGATTTTGCGGGCAGG GCGCGTGAGGCGCCGCTTTGCGTAGTGTCGGTTTCTTGGAAGTGCGCGGG AAAAACTGCGGGGCGTGTCGTGAGTCTTTTGGGTGCAACGTCCTCAGGTT TACGCTTGTGAAGAGCTTGTCATCAGCTTACGCGGGGTAAGTCTGCGCGC GCCTTGCTGTTGTACCAAACTCAGCGGTTGTAGCCGAGCTGTTGTACCCG CGTATGCCGTTTTTTTTTCGCATGCGAGTGTGCCGAAGCGAGGTCTATTT CCTTGGCCATCGCAAGGATGAAACACCGTCGTGACCACGTGCTCCACGGT TTCCTCGGAGTTTCATGTTGCGACATTGTGCCACCATGCGCCAAGGCACG ACCCAACCAACGCCACTATTTTAGGCTTGCGTCAGCAAGTACTGATTCGG CCAGCGCATCACCGTTCCGGATGCGTTACCCCAAGCAAGCGTCTTACCCG CCTCCCCCCAAGGGGCGGGCGCTATAGTCGAGAGCACTCTTAGTAGTATG ATGCTCGCCGCGAGGAAATGCACTATTCTGCCTAACCTTACCGATTCCAG GGCATTTGCCATGGCATCGTCAACCTACAGTCGTTCATTGAGCATCTGCA TGCCTCGCCCGGACCCCACTGCCTGTAGTCCTGAAAGCTAAATAACACAA ACACGAGCGTTTTTTTTTCCCGCCTGTCGATTGTAAGCACGGCGTGTTCC CCTCCTTCGTCGGCTCCCTCGCATAAACTACCGCTTCCCTGATTGCCACG CGCTCTCCTCTCCCCCCGCCCGCGAAAACCGCAAGGCTTCTGCTCTGGGG GCGGCGCACTCCAGCGCGCCCGGACAGATGTGGGTGGATAAGTACAAACC AAGGAGCTCCTCGGAAGTGATCGGGCACTCTGGGCAGGTGAAGAAGCTGA GGGTCTGGCTGGAGAACTGGGAGCGGTGGCACCTCGGTAATACGGGCGTA AAGCCTCCCACGGTGAGACATGCACGCTACGCGGGGGGCGGGAGGGGAGG GGTGGGGGGGGGGGGAGGGGGAGCTCTATTTTTCTGAAATGTGTTTTTTT TTAGAGGGAGGGGGAGGTTCTTGTCGAGTTTTTTGTGACCAAGGGTGTTG GCGGAGTGGTTCGGTAGCTGACTGTGGCGTGGTAGTTCGTTAGTTGGTTC AGTTTTGTCGATGAACGTTCTTTTGTGGTCCTCTCTCCGAATTTGTTGAC GAGATAACGCAGTACGATGACAGCGGGAGCGGCACAAGATGCCTGAGCAA AGAAAAAGAGAAATGCTGACAGGTCTTCTTCGCACACACAATGCAAAATA ATCGTGTCCGTGGGCAACTCGCACGTTGGCGTGCTGCATGGGCCACCTGC TGTCCACGCGCACGTTTCCTATCTATGGTATATATATGTATATCTCCCCC GTTCTTAGCAGGATGCAGCTCACCCTTCATGCGCCTCGCCGAACGCATCA CGGCGATTCGCGCTTTGTAGGGATGCGAGGTCTATGGTCTAACGACTACG GCATGCACGATCAATGAGTACAATGAGTACGCCCCCGTTCCCCAGGGGTC TTGTAGAATGCAACATGCCGCTCGGACGGAGGCCACGAAGATGGTCATCA GCTGCCCCCCAATTAAAAAACTTGTATATATGGGCATGTCCTAGCTCTGC GCGTTATCGATTTTCGCGCTGTTTTTTGCTGGCACGAGACAGGGCAAGGA AAACCCGGGGGCGCGCGCCGCCCTTCTCTCCGGCGTTCCCGGCGTGGGCA AGTCGTCGACGGCTAACCTCGTGGCGAAGGAGATGGGGTACCACGTGATG GAGCTGAACGCGAGCGACACGCGAAACAAGAACTCGCTGTCTACGGAGCT GGCCTCGGTTATAGGCAATCAGGTGAGAGTTACTTGTAGAGTTTTTCAAT TGGCGTTTTTTTTTTGTTTTTTTGTTTGGTAAAAACGTCGTGTGTGTTAC ATTTTTGGGGGCGTACTTGTCATCAAATTATTTTGAGATTGGCATATATA TTGTACGGGTGTGCTTGTAATGAGTTGTGCTCAGCAGTGTGGAACCACTT GTAGAGTTCTTTTTTTGTTATAACGAAAGGTAGGTTTGCTGGCGGGTCGA TTGATTGGCCACACACGCTTCGCCTTTTGTTTTTTTGCGGCGTTTCGCTG CTCCAGAGTTAGTTTGCCGGAAAGAGCGACTGACTGGTGTCTTTCCCAGG GCGAGGTCGTCATTGATGTGCTGTTTCTTCTGCTGCCCCGCGTTCGAAAA GAGCCCCGTTCTGTTACGCGTGTGCAACTCGGTAACAAAAAAGGGCTATG TTGGCACTTCACGCGAGGAGGCAGCAACAAGCGCGATCGATGCCGACACA AGGCCGCGCGTGCACACACGCGAGGACGGCGGAGGAAGACGTGACCCCGA AGAAAACCGATTGGAAAAGCTTCGCGCACATAGCAAGCAGTGTGTGTGTG TTGTGTAAACGTGCTGCTCCACAACCTCCGCCCCTTAGCCCTTTTACCCT CCCCCTACAGCAGCAGGACCCTGAAAAGCAGCAGCATCTATCAATAATAC CATCCGTTTTGTGTATTATTACTATTGCATTATTGAGTACGTGGAAGATT TTTCACTAGGGCGGTATCGACGACAAAACCTAAAGGAAACTTGGGCAAGA CGATAGTACTACAGCAGCCATAGAACACCAGCAGCAGTTTAAACCCACGA CCCCTGTACCACATCATAAACATATCCGGGAAGCAAGTCGCAAAGCACCA TAACCTCAGCGACAACACTGGCGGAGTACGGGAACCACAAACAAATATTA TTACGGAGGTACACTATAATCAAGTAATGAGGACCAAATATCATGACCAG GAATACCCAACTAGTTCGACCACGAGTACCCAAACAACGGAGATCTCGTG AAAAGCAAAAAAGACACGAGATATGATATGGCCATACACAAGACACACCG ACCTTGTGAAAAAAATATCGATAATTCCTGCCTATTTTTATTTTTGTAGG TTGAGACTCGTGGCAAATTTGGACCTGTTAACGTTAACTATGGTCCCCCC TTACAGCTCTTGTGTTTAGAATACTGCGCGCCCCAAGACCCGACGATAAC CACCACAAATCGTGCCACGCGCCTTACCCGATCGGTGTCATCGGCAGGTC CTATCGTTCATGCCGGGCGGTGGCGGCGGAGGCAGCAAGGGAGGCGGTGG TGCTAAGGGCGGCGGGTTTAGGAAGCAGCTGGTGGTGATGGACGAGGTGG ACGGGATGGGCGGGTCGGACCGCGGCGGCATCCAGGAGCTGATCCTGCTG ATCAAGAAGAGCAAGGTGCCCATCATCGCCATCTGCAACGACCGCCAGCA CCAGAAAATCAGGTGTGGTTTTCCCACGTTCCTCTTCCTTCTGTGTGATA CGCCATCATATCATATTAAAACCTTTTTGGTACGAAGTATTAAATTGGTA CTATTAAATTAGTAATAGTAGGGCTCTCCGAAACGACAAAAAAACTATCT CGATGCCAGTCGACAGCTACAACCAGCCCCGTTTCCCTTGAGTTCCCTTC TCTCTCATTCCTGCGTCATAACCCATGGAGTTCCCCAGGGCCCCGCTTCA AGCACGCCTCATTACGTGCTAACAGGCGCTCCAAACAGGGGGCTATTAAT AGTACCAAAAGGGTTAAGATGTTGTAGCGGAGGTGGACAATTTACGCGGA TACACCCTGCTACGGTGTGGCTTGCTTGCTTTCGTCAACGGTCGCGCACT TGTGGGTGCACGTCGTCGCCATGTCATGTATTAATATTAATGTTACGGAG GCACACACTATACTATAATACACTATACTACACTATAATCAAGTAATCAG GACCAAATATCACGACCATGAAAACCCAACTATTCCAACCATTACGTACC CGAACAAAAACCAAAATATCATTAAACAAAAACAAAAACAAAAAGGCCAC AAGATATGGCCGTACACAAGAGAACATCGACCTTGGAATCTCTCGATAAG TCCAGCCTGTTTTGATGTTTGTAGGTTTGAGACTTGTGGCAAATTTGGAG CTGTTAAAGTTAAAGTTAACTATGGTCTAGTCCTCCGTATTAGCACTGTA CTGTACTATACTATGTCTATACTATGTAGTATACTATGTACTATACTATG TACAAGTAAGTCACCGGCGAGACCAACAGAAGGGCTCAATCAAAACAACA CAAAAATCGATACAGTACGACAAAAGTATGTGGTATGGTAGAAAGGAAAA GTTATTATTCCTGGCGCTCACAATTAGCACAGCAAAGATACGCCACCAGG ATATCGCTATTAATAGGACAAAAGACTCTTGTACCATTACCATGTAACAT CATACCTGATATACCTGATATGACACGGCACCATAGCATCACAAGTAACA GCTGAGCCTCCATTATACCCATTGTGACGATGTTCAGCACCATAAAGAAG TCGGTGCCCATAGGGTAAAAAAAGGGGGAGTCTCAGGGGTTCCATTATTT GAGCGAGAGTGCAATCAAGGCCTCAAAGCTGATTTCACAGTTTTGCGCTG ATGATACGCGCCTGCGAGCGCTGCGCGTCATTCCGCCATGTCATGCCATG CCCCTGCCGAAAACTCTCTCTCTCTTACCCTTACTCTTTTTTTCTTTTTT CTTTTTTTTGCTCCAACAGGTCGCTGGTGAACCACTGCTACGACCTGCGG TTCTCGCGACCGCAGAAGGCGACGATCGCGAAGAGAGTGAAGGCGATCGC GACTATGGAGGGGATGGAGGTGGACGAAAACGCGGCCGAGATGCTGGTGG AGGCCAACGGGAACGACATTCGACAGGTGTGCGATAGAAAGATACGAAGT AGATAGATAGATAGACAGACAGATAGATAGACAGACGCCTGCGCATGAAA AGGCAAAGCTTCGTCGGACGGCACCATCCACCAGCCCACCGAGGGCGGGA GTATATATTGAATGTGTTGGAAGCGCATCGTATCGTGCTGCGGCCGCACT TGTGACCGCCGCGACGGTCCATCCGCCCGGTGCATTTTTTGCACGGAAAA GGTTCTACACGCGATGCAGATGTGGAGCCGCAAGTCGTCCAAGATGACCT ACATGAACCTCAAAGGTGGAATATCCAGCATCGAGAAGGACAAGGTGCGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig11356:120..7119-

>mRNA_S-dermatodea_contig11356.874.1 ID=mRNA_S-dermatodea_contig11356.874.1|Name=mRNA_S-dermatodea_contig11356.874.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2544bp|location=Sequence derived from alignment at S-dermatodea_contig11356:120..7119- (Saccorhiza dermatodea SderLu1190fm monoicous)
CTCCGCCAGTACGGAGCCAAGGTGACGGGCTCGGTGAGCAGCAGGACGAC
GTACCTGCTGCTGGGATCTGTGCTGGATGACGGCCGAGCGCCGGAGGAGG
GAAGCTCCGCCAGTACGGAGCCAAGGTGACGGGCTCGGTGAGCAGCAGGA
CGACGTACCTGCTGCTGGGATCTGTGCTGGATGACGGCCGAGCGCCGGAG
GAGGGAAGCAAATACAAGAAGGCCCAGCAGCACAAGACCAAGGTCGTCGA
TGAGGATGACCTCTTCAAGATGCTGAGGGACTCCAACCCCGGCGGCAAGT
CGCCGCCATCGGAGTTGAAGCCGGGGGCAGCTGGGGGCGCGGCGGCGGCG
GCGGCTGGAGGAGAGAAACAAATACAAGAAGGCCCAGCAGCACAAGACCA
AGGTCGTCGATGAGGATGACCTCTTCAAGATGCTGAGGGACTCCAACCCC
GGCGGCAAGTCGCCGCCATCGGAGTTGAAGCCGGGGGCAGCTGGGGGCGC
GGCGGCGGCGGCGGCTGGAGGAGAGAAACCGCTAGTGGCGAACCCGTACG
CGAAGGCGGCGGTGGTGAACCCCTACGGTGCCAAGAAACCCGCCGTCGGC
GGTAAGGCTGCCGTCGTGAATCCGTACGGGGCTGCGGCGGTGGGGGGCGG
GGGCGGAAGGGCGTCGAGCGGGAAGTCTCCGGCGAAGGTGGTGAGAAGGG
TGGTGGCGCCGCTAGTGGCGAACCCGTACGCGAAGGCGGCGGTGGTGAAC
CCCTACGGTGCCAAGAAACCCGCCGTCGGCGGTAAGGCTGCCGTCGTGAA
TCCGTACGGGGCTGCGGCGGTGGGGGGCGGGGGCGGAAGGGCGTCGAGCG
GGAAGTCTCCGGCGAAGGTGGTGAGAAGGGTGGTGGCGGCTTCTGCTCTG
GGGGCGGCGCACTCCAGCGCGCCCGGACAGATGTGGGTGGATAAGTACAA
ACCAAGGAGCTCCTCGGAAGTGATCGGGCACTCTGGGCAGGTGAAGAAGC
TGAGGGTCTGGCTGGAGAACTGGGAGCGGTGGCACCTCGGTAATACGGGC
GTAAAGCCTCCCACGGCTTCTGCTCTGGGGGCGGCGCACTCCAGCGCGCC
CGGACAGATGTGGGTGGATAAGTACAAACCAAGGAGCTCCTCGGAAGTGA
TCGGGCACTCTGGGCAGGTGAAGAAGCTGAGGGTCTGGCTGGAGAACTGG
GAGCGGTGGCACCTCGGTAATACGGGCGTAAAGCCTCCCACGGGCAAGGA
AAACCCGGGGGCGCGCGCCGCCCTTCTCTCCGGCGTTCCCGGCGTGGGCA
AGTCGTCGACGGCTAACCTCGTGGCGAAGGAGATGGGGTACCACGTGATG
GAGCTGAACGCGAGCGACACGCGAAACAAGAACTCGCTGTCTACGGAGCT
GGCCTCGGTTATAGGCAATCAGGGCAAGGAAAACCCGGGGGCGCGCGCCG
CCCTTCTCTCCGGCGTTCCCGGCGTGGGCAAGTCGTCGACGGCTAACCTC
GTGGCGAAGGAGATGGGGTACCACGTGATGGAGCTGAACGCGAGCGACAC
GCGAAACAAGAACTCGCTGTCTACGGAGCTGGCCTCGGTTATAGGCAATC
AGGTCCTATCGTTCATGCCGGGCGGTGGCGGCGGAGGCAGCAAGGGAGGC
GGTGGTGCTAAGGGCGGCGGGTTTAGGAAGCAGCTGGTGGTGATGGACGA
GGTGGACGGGATGGGCGGGTCGGACCGCGGCGGCATCCAGGAGCTGATCC
TGCTGATCAAGAAGAGCAAGGTGCCCATCATCGCCATCTGCAACGACCGC
CAGCACCAGAAAATCAGGTCCTATCGTTCATGCCGGGCGGTGGCGGCGGA
GGCAGCAAGGGAGGCGGTGGTGCTAAGGGCGGCGGGTTTAGGAAGCAGCT
GGTGGTGATGGACGAGGTGGACGGGATGGGCGGGTCGGACCGCGGCGGCA
TCCAGGAGCTGATCCTGCTGATCAAGAAGAGCAAGGTGCCCATCATCGCC
ATCTGCAACGACCGCCAGCACCAGAAAATCAGGTCGCTGGTGAACCACTG
CTACGACCTGCGGTTCTCGCGACCGCAGAAGGCGACGATCGCGAAGAGAG
TGAAGGCGATCGCGACTATGGAGGGGATGGAGGTGGACGAAAACGCGGCC
GAGATGCTGGTGGAGGCCAACGGGAACGACATTCGACAGGTCGCTGGTGA
ACCACTGCTACGACCTGCGGTTCTCGCGACCGCAGAAGGCGACGATCGCG
AAGAGAGTGAAGGCGATCGCGACTATGGAGGGGATGGAGGTGGACGAAAA
CGCGGCCGAGATGCTGGTGGAGGCCAACGGGAACGACATTCGACAGGTTC
TACACGCGATGCAGATGTGGAGCCGCAAGTCGTCCAAGATGACCTACATG
AACCTCAAAGGTGGAATATCCAGCATCGAGAAGGACAAGGTGCGGGTTCT
ACACGCGATGCAGATGTGGAGCCGCAAGTCGTCCAAGATGACCTACATGA
ACCTCAAAGGTGGAATATCCAGCATCGAGAAGGACAAGGTGCGG
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