mRNA_S-dermatodea_contig11355.872.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11355.872.1 vs. uniprot
Match: UPI001C727911 (uncharacterized protein LOC107440395 n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C727911) HSP 1 Score: 85.5 bits (210), Expect = 7.140e-16 Identity = 49/128 (38.28%), Postives = 72/128 (56.25%), Query Frame = 1
Query: 208 GPRTECALCFALLWEDDGETSSLCCQKGKVKLWPIPTAPPPEIAGLVSGDSAESRHFLLNIRRANSAFAFASTGAGNGHPLNQRRFPAGGPFTFVIQGEFRHTIGPVAPRPGVPPRYAQIYYYSGEDE 591
G TEC C AL W+ GET S+CC GK+KL + T P P +A L++ S E+ HF NIRR NS F S G+G+ + ++ F TF +QG+ H IG + P+ P + Q+Y+ +++
Sbjct: 156 GMATECISCQALKWK--GETPSMCCSNGKIKLCELQTPPEPLLA-LLTDSSIETVHFQSNIRRYNSCFQMTSFGSGS--EIREQGFMP----TFKVQGQVYHRIGSLQPQINDKPNFLQLYFVGDQEK 274
BLAST of mRNA_S-dermatodea_contig11355.872.1 vs. uniprot
Match: A0A8D9E7Q7_9HEMI (ATP-dependent DNA helicase n=3 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D9E7Q7_9HEMI) HSP 1 Score: 85.5 bits (210), Expect = 7.310e-16 Identity = 53/138 (38.41%), Postives = 72/138 (52.17%), Query Frame = 1
Query: 178 HEDDWPQHLLGPRTECALCFALLWEDDGETSSLCCQKGKVKLWPIPTAPPPEIAGLVSGDSAESRHFLLNIRRANSAFAFASTGAGNGHPLNQRRFPAGGPFTFVIQGEFRHTIGPVAPRPGVPPRYAQIYYYSGEDE 591
+ED+ + EC C AL W E + +CC +GKVKL PI PP + L+ G+SA+S+HFL NIR NS FA S A H ++ P TF IQG+ H +G + P G P + QIY+ E +
Sbjct: 58 YEDNRKLDIGRMSKECNHCSALKWTR--EPAGMCCSQGKVKLLPI-RDPPEPLQSLLLGESADSKHFLKNIRLYNSLFAMTSFAA---HEVSDGWTP-----TFKIQGQVYHRVGSLLPAEGTQPVFLQIYFLGSETD 184
BLAST of mRNA_S-dermatodea_contig11355.872.1 vs. uniprot
Match: A0A815TLT8_ADIRI (ATP-dependent DNA helicase n=1 Tax=Adineta ricciae TaxID=249248 RepID=A0A815TLT8_ADIRI) HSP 1 Score: 85.5 bits (210), Expect = 7.350e-16 Identity = 54/136 (39.71%), Postives = 74/136 (54.41%), Query Frame = 1
Query: 184 DDWPQHLLGPRTE-CALCFALLWEDDGETSSLCCQKGKVKLWPIPTAPPPEIAGLVSGDSAESRHFLLNIRRANSAFAFASTGAGNGHPLNQRRFPAGGPFTFVIQGEFRHTIGPVAPRPGVPPRYAQIYYYSGED 588
D+ PQ +G T+ C C AL W GET +CC GKVKL P PP + L+SG +AES HFL NIR+ NS F S G +++ +G TF +QG+ H +G + P P++ QIY+ G+D
Sbjct: 141 DNHPQLCIGRMTDVCPYCEALKWP--GETRGMCCSGGKVKL-PQLRPPPEPLESLMSGSTAESNHFLDNIRKYNSCFQMTSFG------MSKEVVDSGFMPTFRVQGQVYHRVGSLLPPSDDEPKFLQIYFM-GDD 266
BLAST of mRNA_S-dermatodea_contig11355.872.1 vs. uniprot
Match: A0A8D9BS93_9HEMI (ATP-dependent DNA helicase (Fragment) n=1 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D9BS93_9HEMI) HSP 1 Score: 84.7 bits (208), Expect = 1.310e-15 Identity = 53/138 (38.41%), Postives = 72/138 (52.17%), Query Frame = 1
Query: 178 HEDDWPQHLLGPRTECALCFALLWEDDGETSSLCCQKGKVKLWPIPTAPPPEIAGLVSGDSAESRHFLLNIRRANSAFAFASTGAGNGHPLNQRRFPAGGPFTFVIQGEFRHTIGPVAPRPGVPPRYAQIYYYSGEDE 591
+ED+ + EC C AL W E + +CC +GKVKL PI PP + L+ G+SA+S+HFL NIR NS FA S A H ++ P TF IQG+ H +G + P G P + QIY+ E +
Sbjct: 41 YEDNRKLDIGRMSKECNHCSALKWTR--EPAGMCCSQGKVKLLPI-RDPPEPLQSLLLGESADSKHFLKNIRLYNSLFAMTSFAA---HEVSDGWTP-----TFKIQGQVYHRVGSLLPAEGSQPVFLQIYFLGSETD 167
BLAST of mRNA_S-dermatodea_contig11355.872.1 vs. uniprot
Match: UPI001156685D (uncharacterized protein LOC115261339 n=3 Tax=Aedes albopictus TaxID=7160 RepID=UPI001156685D) HSP 1 Score: 84.3 bits (207), Expect = 1.880e-15 Identity = 47/121 (38.84%), Postives = 69/121 (57.02%), Query Frame = 1
Query: 223 CALCFALLWEDDGETSSLCCQKGKVKLWPIPTAPPPEIAGLVSGDSAESRHFLLNIRRANSAFAFASTGAGNGHPLNQRRFPAGGPFTFVIQGEFRHTIGPVAPRPGVPPRYAQIYYYSGE 585
C C A +++ E+ LCC+ GKVKL + PP + +SGD+AES+HFL NIR+ NS F S GA + + Q FP+ TF +QG+ H G + P P PP++ Q+Y+ +
Sbjct: 610 CRYCQAQKFKN--ESPGLCCKNGKVKLLQL-DQPPEALMNYMSGDTAESKHFLKNIRKYNSCFQMTSFGATS--VVEQGGFPS----TFTVQGQIYHKAGSLLPLPDQPPKFLQLYFIGND 721
BLAST of mRNA_S-dermatodea_contig11355.872.1 vs. uniprot
Match: UPI0010BDDA4F (uncharacterized protein LOC114828554 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0010BDDA4F) HSP 1 Score: 79.7 bits (195), Expect = 3.690e-15 Identity = 50/137 (36.50%), Postives = 74/137 (54.01%), Query Frame = 1
Query: 184 DDWPQHLLGPRTE-CALCFALLWEDDGETSSLCCQKGKVKLWPIPTAPPPEIAGLVSGDSAESRHFLLNIRRANSAFAFASTGAGNGHPLNQRRFPAGGPFTFVIQGEFRHTIGPVAPRPGVPPRYAQIYYYSGEDE 591
D P+ ++G + C C AL +++ ET+ +CC G+VKL P +PP + LV+G+++ES+HFL NIR+ NSAF S GA N P TF QG+ H G + P P ++ QIY+ D+
Sbjct: 59 DLHPKVVIGRMDQSCQFCRALKFKN--ETAGMCCANGQVKL-PDLRSPPQTLRALVAGETSESKHFLKNIRKYNSAFQMTSFGATE--TFNDEFMP-----TFKCQGQIYHRAGSLLPLPNEEHQFLQIYFMGDADQ 185
BLAST of mRNA_S-dermatodea_contig11355.872.1 vs. uniprot
Match: UPI001652E20F (uncharacterized protein LOC110907174 n=3 Tax=Helianthus annuus TaxID=4232 RepID=UPI001652E20F) HSP 1 Score: 82.0 bits (201), Expect = 1.160e-14 Identity = 54/134 (40.30%), Postives = 68/134 (50.75%), Query Frame = 1
Query: 223 CALCFALLWEDDGETSS-----------LCCQKGKVKLWPIPTAPPPEIAGLVSGDSAESRHFLLNIRRANSAFAFASTGAGNGHPLNQRRFPAGGPFTFVIQGEFRHTIGPVAPRPGVPPRYAQIYYYSGEDE 591
C +C+A LW D E S LCC KV L TA P + +S D+ ES+HFL NIRR NS FAF S G H +N PF + I GE H+IG + P GV P++ Q+Y Y E+E
Sbjct: 196 CEVCYAKLW--DAEKGSGRKEGGKICHMLCCGYAKVVLPDYKTATPYYKSLFMSNDN-ESKHFLKNIRRYNSMFAFTSMGGKVDHTVNT----GNAPFCYRISGENYHSIGSLVPPNGVKPKFCQLYIYDTENE 322
BLAST of mRNA_S-dermatodea_contig11355.872.1 vs. uniprot
Match: A0A816KES6_BRANA ((rape) hypothetical protein n=2 Tax=Brassica napus TaxID=3708 RepID=A0A816KES6_BRANA) HSP 1 Score: 80.5 bits (197), Expect = 2.640e-14 Identity = 52/136 (38.24%), Postives = 71/136 (52.21%), Query Frame = 1
Query: 211 PRTECALCFALLWED-----DGETSSL----CCQKGKVKLWPIPTAPPPEIAGLVSGDSAESRHFLLNIRRANSAFAFASTGAGNGHPLNQRRFPAGGPFTFVIQGEFRHTIGPVAPRPGVPPRYAQIYYYSGEDE 591
P EC C AL+W+ D T L CC +G++KL P+ PPP + L+ + + F IR NS AF S GA + + R GPFTF IQG+ H IG + P+PG+PPRY Q+Y + +E
Sbjct: 57 PILECPSCGALVWQSESTGRDPRTKELRFTICCNQGQIKLPPM-RQPPPVLEKLL-----QCKQFRETIRVYNSLLAFTSIGANIDYSVVFGR----GPFTFRIQGQTYHRIGSLIPKPGLPPRYLQLYIFDTANE 182
BLAST of mRNA_S-dermatodea_contig11355.872.1 vs. uniprot
Match: UPI0016531018 (uncharacterized protein LOC110903608 n=3 Tax=Helianthus annuus TaxID=4232 RepID=UPI0016531018) HSP 1 Score: 79.3 bits (194), Expect = 9.360e-14 Identity = 53/134 (39.55%), Postives = 68/134 (50.75%), Query Frame = 1
Query: 223 CALCFALLWEDDGETSS-----------LCCQKGKVKLWPIPTAPPPEIAGLVSGDSAESRHFLLNIRRANSAFAFASTGAGNGHPLNQRRFPAGGPFTFVIQGEFRHTIGPVAPRPGVPPRYAQIYYYSGEDE 591
C +C+A LW D E S LCC KV L TA P + +S D+ ES+HFL NIRR NS FAF S G ++Q PF + I GE H+IG + P GV P++ Q+Y Y E+E
Sbjct: 196 CEVCYAKLW--DAEKGSGRKEGGKICHMLCCGYAKVVLPDYKTATPYYKSLFMSNDN-ESKHFLKNIRRYNSMFAFTSMGG----KVDQTVNTGNAPFCYRISGENYHSIGSLVPPNGVKPKFCQLYIYDTENE 322
BLAST of mRNA_S-dermatodea_contig11355.872.1 vs. uniprot
Match: UPI001653246C (uncharacterized protein LOC110876575 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI001653246C) HSP 1 Score: 79.3 bits (194), Expect = 9.900e-14 Identity = 53/134 (39.55%), Postives = 68/134 (50.75%), Query Frame = 1
Query: 223 CALCFALLWEDDGETSS-----------LCCQKGKVKLWPIPTAPPPEIAGLVSGDSAESRHFLLNIRRANSAFAFASTGAGNGHPLNQRRFPAGGPFTFVIQGEFRHTIGPVAPRPGVPPRYAQIYYYSGEDE 591
C +C+A LW D E S LCC KV L TA P + +S D+ ES+HFL NIRR NS FAF S G ++Q PF + I GE H+IG + P GV P++ Q+Y Y E+E
Sbjct: 197 CEVCYAKLW--DAEKGSGRKEGGKICHMLCCGYAKVVLPDYKTATPYYKSLFMSNDN-ESKHFLKNIRRYNSMFAFTSMGG----KVDQTVNTGNAPFCYRISGENYHSIGSLVPPNGVKPKFCQLYIYDTENE 323 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11355.872.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11355.872.1 >prot_S-dermatodea_contig11355.872.1 ID=prot_S-dermatodea_contig11355.872.1|Name=mRNA_S-dermatodea_contig11355.872.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=197bp QQQQRRQQQRDVGAAAAAAAAALRQQPRLRLQRRARTTRQATQLARTLGSback to top mRNA from alignment at S-dermatodea_contig11355:1049..1894+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11355.872.1 ID=mRNA_S-dermatodea_contig11355.872.1|Name=mRNA_S-dermatodea_contig11355.872.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=846bp|location=Sequence derived from alignment at S-dermatodea_contig11355:1049..1894+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11355:1049..1894+ >mRNA_S-dermatodea_contig11355.872.1 ID=mRNA_S-dermatodea_contig11355.872.1|Name=mRNA_S-dermatodea_contig11355.872.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1182bp|location=Sequence derived from alignment at S-dermatodea_contig11355:1049..1894+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |