mRNA_S-dermatodea_contig11354.871.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11354.871.1
Unique NamemRNA_S-dermatodea_contig11354.871.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig11354.871.1 vs. uniprot
Match: A0A6H5L392_9PHAE (APH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L392_9PHAE)

HSP 1 Score: 730 bits (1884), Expect = 2.860e-251
Identity = 501/904 (55.42%), Postives = 564/904 (62.39%), Query Frame = 1
Query:    1 MAIDFPLAPLHRYLWDHLGEIITP------SSRRLG----VSNAW----------------ASGVGFEGFDDFRVELKKFPGGQSNPTFLLLVCLSPPLPVRQKSRGDPRATPAAAXXXXXRAAAATEMVTEHRFVLRKKPASVKVSSAHAVEREFRVLRALR---ETDVPVPQALLLCEDPGVIGTPFYVMEFVNGRVFSDSALPGMGRRERAAAYASAAETLAKIHRLDFVSVGLEGFGRSSGGYLGRQVATLERVAKKQEEDAEPIPGFGEVVKDLLELSPG---VPDRVTLVHGDFRVDNLVFHPTEPRVIAVLDWELSTLGHPLADLANLCILHHLPAAPAEAPG-------GASKGR-----------------------VKSSPLAGLKGLDLRALGIPEQSELMDVYREAV---------GRDRLAGVAGRGVAELGLAFIFFKMAVIAHGVKARLSRGVASSESASIVSAMVPVMVDLAKGQISALRRTRAHDADD----------------------------------DGGDRGGESXXXXXXXNDRHKSKPQRPRPKAVLFDVGGVLSTSPLLAISRFERETRLPPSYIGVAIAAGGEDGLFQRLERGEERLGDRFLGRFAEYLCGDHAKLAYVEY-VARRARGRSLSTLVVSAAADIAEIGSVEPSAEGSVXXXXXXXXXXXXXXXXXXXX------------------IDVLELFRAITAAAAVPVPEMIAAAKTLRHRGLKVAVVSNDFLLEKGFVLGGQRRSRAGTERDSDSLRHAAAGA------RQASGGVYSQLPALCDAVVLSSVVGRRKPDRRIYEDACESLGVSPREAVFVDDIRANVRAAEACGMQAVWVRPGGSVEGRRAIVELQAITGVALTTGDGYTR 2322
            MAIDFP+ PL R+LWDHL EI++P      +S   G      +AW                A+G G EGFD FR+ELKKF  GQSNPTFLL V LSPPL               A XXXXX     +    + +FVLRKKPASV VSSAHAVEREFR+LRALR    ++VPVP+ LLLCEDP VIGT FYVMEFV GR+FSD+ALPG+   ERAAAY SAAETLA++H +DF+  GLEGFGR  GGYLGRQVATLERVA KQ EDA PI GF  VV+DL EL      V DRV +VHGDFR+DNLVFHP EPRVIAVLDWELSTLGHPLADLANLCILHHLPA+ A           GAS+G                          +SPLAGLKGL+L+ALGIP+QSELM  YR+           G D + GVAG GVAELGLAF+FFKMAVIAHGVKAR SRGVASS  AS+VSAMVP MV LAK Q+S LRR R                                                 XXXXXXX     S P   RP+AV FDVGGVLS SPLLAI RFE+E  LPPSY+GVAIAA G+DGLFQRLERGEERLGDRFL RF EYL  D AK AYV + VARR R  ++      +++                XXXXXXXXXXXXXXXXXXXX                  +DV ELFR ITAAA VPVPEMI AA++LR +G  V  VSNDFL+E+GF LG  RR      RD     HAA  A       +A GGVYS+LP LCD VVLSS  G RKP R+IY+DAC +LGVS  EAVFVDDIR N+  AEA GM+ VWV  GGS+    A+ EL+A+TGV L    G  R
Sbjct:    1 MAIDFPIPPLRRFLWDHLSEIVSPDDVVGSNSSAQGDHGQQQHAWSTHGPGSGXXXXXXXXAAGTGHEGFDGFRIELKKFSSGQSNPTFLLEVHLSPPL---------------AXXXXXXXXXXXSRTNIKRKFVLRKKPASVTVSSAHAVEREFRILRALRLDPGSEVPVPRPLLLCEDPLVIGTAFYVMEFVQGRIFSDAALPGLAPAERAAAYESAAETLARLHHVDFMRAGLEGFGRVEGGYLGRQVATLERVAAKQAEDAGPIEGFDGVVRDLRELIASGSVVQDRVAIVHGDFRIDNLVFHPAEPRVIAVLDWELSTLGHPLADLANLCILHHLPASAAAMAXXXXXXXXGASRGAGVGGAALAGPRENRRPSTLSSPPSATSPLAGLKGLNLKALGIPQQSELMAAYRKTASTLAAGGSGGGDPIRGVAGPGVAELGLAFVFFKMAVIAHGVKARQSRGVASSTQASLVSAMVPAMVALAKEQVSKLRRRRRRPPKHRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTGSPPPLARPRAVFFDVGGVLSQSPLLAILRFEKEALLPPSYVGVAIAAAGQDGLFQRLERGEERLGDRFLKRFEEYLVSDEAKRAYVGWCVARRRRRPTIGKDNTPSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVLAVDVRELFRRITAAARVPVPEMIDAAQSLRRQGFLVGAVSNDFLVERGFDLGRPRR------RDDKPGVHAAEAAVAATVKAEAGGGVYSRLPDLCDVVVLSSATGSRKPSRKIYDDACRALGVSAPEAVFVDDIRENIITAEALGMRTVWVASGGSIAA--ALSELEAVTGVKLVADGGVRR 881          
BLAST of mRNA_S-dermatodea_contig11354.871.1 vs. uniprot
Match: D8LKT3_ECTSI (APH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKT3_ECTSI)

HSP 1 Score: 697 bits (1798), Expect = 1.880e-239
Identity = 465/825 (56.36%), Postives = 519/825 (62.91%), Query Frame = 1
Query:  115 VGFEGFDDFRVELKKFPGGQSNPTFLLLVCLSPPLPVRQKSRGDPRATPAAAXXXXXRAAAATEMVTEHRFVLRKKPASVKVSSAHAVEREFRVLRALR---ETDVPVPQALLLCEDPGVIGTPFYVMEFVNGRVFSDSALPGMGRRERAAAYASAAETLAKIHRLDFVSVGLEGFGRSSGGYLGRQVATLERVAKKQEEDAEPIPGFGEVVKDLLELSPG---VPDRVTLVHGDFRVDNLVFHPTEPRVIAVLDWELSTLGHPLADLANLCILHHLPAAPAEAPG---------------------GASKGRVKS---------SPLAGLKGLDLRALGIPEQSELMDVYREAV----------GRDRLAGVAGRGVAELGLAFIFFKMAVIAHGVKARLSRGVASSESASIVSAMVPVMVDLAKGQISALRRTRAHDADDDGGDRGGESXXXXXXXNDRHKSKPQRPRPKAVLFDVGGVLSTSPLLAISRFERETRLPPSYIGVAIAAGGEDGLFQRLERGEERLGDRFLGRFAEYLCGDHAKLAYVEYVARRAR-----------------------GRSLSTLVVSAAADIA---EIGSVEPSAEGSVXXXXXXXXXXXXXXXXXXXXIDVLELFRAITAAAAVPVPEMIAAAKTLRHRGLKVAVVSNDFLLEKGFVLGGQRRSRAGTERDSDSLRHAAAGARQASGG-----------------VYSQLPALCDAVVLSSVVGRRKPDRRIYEDACESLGVSPREAVFVDDIRANVRAAEACGMQAVWVRPGGSVEGRRAIVELQAITGVALTTGDGYTR 2322
            +G EGFD FR+ELKKF  GQSNPTFLL V LSP                                     FVLRKKPASV VSSAHAVEREFR+LRALR    +DVPVP+ LLLCEDP VIGTPFYVMEFV GR+FSD+ALPG+   ERAAAY SAAETLA++H +DFV  GL GFGR  GGYLGRQVATLERVA KQ EDA PI GF  +V+DL EL      V DRV +VHGDFR+DNLVFHPTE RVIAVLDWELSTLGHPLADLANLCILHHLPA+                           G+++ R  S         SPLAGLKGLDL+ALGIP+QSELM  YR A           G D   GVAG GVAELGLAF+FFKMAVIAHGVKAR  RGVASS  AS+VSAMVP MV LAK Q+S LRR  A              XXXXXXX           RP+AV FDVGGVLS SPLLAI RFE+E  LPPSY+GVAIAA G+DGLFQRLERGEERLGDRFL RF EYL GD AK AYV +   R R                       G+S ++    A+ ++A   E G          XXXXXXXXXXXXXXXXXX  +DV ELF+ ITAAA VPVPEMI AA++LR +G  V  VSNDFL+E+GF LG  RR       D   +R A A                         VYS+LP LCD VVLSS  G RKP R+IY+DAC +LGVS  EAVFVDDIR N+ AAEA GM+ VW+  GGS+    A+ EL+A+TGV L  G G  R
Sbjct:    1 MGHEGFDGFRIELKKFSSGQSNPTFLLEVHLSPXXXXXXXXXXXXXXX--------------XXXXXXXXFVLRKKPASVTVSSAHAVEREFRILRALRLDPASDVPVPRPLLLCEDPAVIGTPFYVMEFVQGRIFSDAALPGLAPAERAAAYESAAETLARLHHVDFVRAGLGGFGRGEGGYLGRQVATLERVAAKQAEDAGPIEGFDGIVRDLRELIASGSVVQDRVAIVHGDFRIDNLVFHPTESRVIAVLDWELSTLGHPLADLANLCILHHLPASAVAIASXXXXXXXXXXXXXXXXXXXRAGSTENRRPSTLSPPPSTTSPLAGLKGLDLKALGIPQQSELMAAYRRAASTLADGGSGGGGDPTRGVAGPGVAELGLAFVFFKMAVIAHGVKARQFRGVASSAQASLVSAMVPAMVALAKEQVSNLRRVLAXXXXXXXXX----XXXXXXXXXXXXXXXXXLARPRAVFFDVGGVLSESPLLAILRFEKEALLPPSYVGVAIAAAGQDGLFQRLERGEERLGDRFLERFEEYLVGDEAKRAYVGWCVARRRWRRPTIGKDKTPSSSTSPAGGKGGQSCASSAPRASTNVATPRERGGGXXXXXXXXXXXXXXXXXXXXXXXXXXVAVDVRELFQRITAAARVPVPEMIDAAQSLRRQGFLVGAVSNDFLVERGFALGRPRR-----RDDKPGVRAAEAAVXXXXXXXXXXXXXXXXXXXXXXXVYSRLPDLCDVVVLSSATGSRKPSRKIYDDACRALGVSAPEAVFVDDIRENIVAAEALGMRTVWMASGGSIAA--ALSELEAVTGVKLAAGGGVRR 800          
BLAST of mRNA_S-dermatodea_contig11354.871.1 vs. uniprot
Match: A0A835Z1G4_9STRA (Phosphotransferase enzyme family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1G4_9STRA)

HSP 1 Score: 461 bits (1185), Expect = 9.020e-148
Identity = 342/818 (41.81%), Postives = 423/818 (51.71%), Query Frame = 1
Query:    4 AIDFPLAPLHRYLWDHLGEIITPS---SRRLGVSNAWASGVGFEGFDDFRVELKKFPGGQSNPTFLLLVCLSPPLPVRQKSRGDPRATPAAAXXXXXRAAAATEMVTEHRFVLRKKPASVKVSSAHAVEREFRVLRALRETDVPVPQALLLCEDPGVIGTPFYVMEFVNGRVFSDSALPGMGRRERAAAYASAAETLAKIHRLDFVSVGLEGFGRSSGGYLGRQVATLERVAKKQEEDAEPIPGFGEVVKDLLELSPGVPDRVTLVHGDFRVDNLVFHPTEPRVIAVLDWELSTLGHPLADLANLCILHHLPAAPAEAPGGASKGRVKSSP------LAGLKGLDLRALGIPEQSELMDVYREAVGRDRLAGVAGRGVAELG------LAFIFFKM-----------------------------------------------------AVIAHGVKARLSRGVASSESASIVSAMVPVMVDLAKGQISALRRTRAHDADDDGGDRGGESXXXXXXXNDRHKSKPQRPRPKAVLFDVGGVLSTSPLLAISRFERETRLPPSYIGVAIAA-----GGEDGLFQRLERGEERLGDRFLGRFAEYLCGDHAKLAYVEYVARRARGRSLSTLVVSAAADIAEIGSVEPSAEGSVXXXXXXXXXXXXXXXXXXXXIDVLELFRAITAAAAVPVPEMIAAAKTLRHRGLKVAVVSNDFLLEKGFVLGGQRRSRAGTERDSDSLRHAAAGARQASGGVYSQLPALCDAVVLSSVVGRRKPDRRIYEDACESLGVSPREAVFVDDIRANVRAAEACGMQAVWVRPG 2238
             +DF +  L RYLWD+L  I+      +   GVS  W SG G+EGFD F ++LKKF GGQSNPTFLL + L+PPL         PRAT + A                   VLRKKPA   ++SAHAVEREFR LRALR + VPVP A +LCED  VIGTPFYVME V GR F D ALPG+ R ER A YASA   LA++H++DF +VGL  FGR+  G+  RQ+ TL RVA  Q + A P+ G   + + L      VPD V L+HGD+R+DNL++H +EPRV+AVLDWELSTLGHP+ADLA+L   H +   P + P   ++G   S P      L+GL G+DL A G+P   EL+  Y            AG   AEL       LAF+FFK                                                      AVIAHGV ARL+RGVASS+ AS V++ VP +V+LA   ++                    +    XXX         R R +A+L DVGGVL+ SPL AI+R+ERE   P  YIG A++      GG+D  F RLERG+E L D FL      +     + A+    A +  G +                       G+ XXXXXXXXXXXXXX      +   EL   I AA+   V EM  AA+  R RG+ + +VSNDF    GF L G                 AA G       +Y+ L    DAVV SS VG RKP+ RIYE AC  L V P EAVFVDD+RANVRAAEA GM+ V  R G
Sbjct:    7 GVDFDVEKLRRYLWDYLVPILPADGGVASGEGVSATWLSGGGYEGFDGFSIKLKKFKGGQSNPTFLLTLSLTPPLGPGGGYLLAPRATESRA------------------VVLRKKPARTAIASAHAVEREFRALRALRGSAVPVPAAHVLCEDAQVIGTPFYVMELVAGRGFDDPALPGVARAERRAIYASAVRALARLHQVDFAAVGLADFGRAGAGFFARQLRTLTRVAAAQAQHAGPLHGLDGLAERLAGALKAVPDAVALMHGDYRLDNLMYHASEPRVVAVLDWELSTLGHPMADLASLVGSHFIWGPPRQPPAARAEGTAPSPPPPALPLLSGLAGVDLAAEGLPTADELVAQY---------VAEAGGRAAELAWHLHFYLAFMFFKASARAAVIRAAALCAARRVSLRRRRCRCCHIALRRQQPARLLLRKFTRKTQSLNAVIAHGVAARLARGVASSQHASAVASAVPRLVELAGDHLARY------------------AAAAPXXXXXXXXXXXXRCR-RALLLDVGGVLTASPLAAIARYEREIGAPQGYIGFALSGAWDGGGGDDSPFHRLERGQEMLDDAFLELLESSVNAPPCRAAFAARSASKGDGGN---------------------HHGTXXXXXXXXXXXXXXXGTEHFHVSARELMTRIAAASRAAVLEMRRAAEAARSRGVLIGIVSNDFKARAGFSLRGGXXXXXXXXXXXXXXXDAARGI-----DIYATLHEFADAVVRSSDVGARKPEARIYELACARLRVRPVEAVFVDDLRANVRAAEALGMRGVHARVG 752          
BLAST of mRNA_S-dermatodea_contig11354.871.1 vs. uniprot
Match: A0A4D9CXK6_9STRA (APH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXK6_9STRA)

HSP 1 Score: 352 bits (903), Expect = 1.730e-107
Identity = 275/745 (36.91%), Postives = 374/745 (50.20%), Query Frame = 1
Query:  145 VELKKFPGGQSNPTFLLLVCLSPPLPVRQKSRGDPRATPAAAXXXXXRAAAATEMVTEHRFVLRKKPASVKVSSAHAVEREFRVLRALRETDVPVPQALLLCEDPGVIGTPFYVMEFVNGRVFSDSALPGMGR-RERAAAYASAAETLAKIHRLDFVSVGLEGFGRSSGGYLGRQVATLERVAKKQEEDAEPIPGFGEVVKDLLELS--PG--VPDRVTLVHGDFRVDNLVFHPTEPRVIAVLDWELSTLGHPLADLANLCILHHLPAAPAEAPGGASKGRVKSSPLAGLKGLDLRALGIPEQSELMDVYREAVGR---DRLAGVAGRGVAELGLAFIFFKMAVIAHGVKARLSRGVASSESASIVSAMVPVMVDLAKGQISALRRTRAHDADDDGGDRGGESXXXXXXXNDRHKSKPQRP---------RPKAVLFDVGGVLS-TSPLLAISRFERETRLPPSYIGVAI-AAGGEDGLFQRLERGEERLGDRFLGRFAEYLCGDHAKLAYVEYVARRARGRSLSTLVVSAAADIAEIGSVEPSAEGSVXXXXXXXXXXXXXXXXXXXXIDVLELFRAITAAAAVPVPEMIAAAKTLRHRGLKVAVVSNDFLLEKGFVLGGQRRSRAGTERDSDSLRHAAAGARQASGGVYSQLPALCDAVVLSSVVGRRKPDRRIYEDACESLGVSPREA---VFVDDIRANVRAAEACGMQAVWVRPGGSVEGRRAIVELQAITGVALTTGDG 2313
            ++  K  GGQSNPT+LL                  R  P                 ++ + VLRKKPA VKV+SAHAVEREFRVL AL+ +DVPVP    LCED  V+GTPFY+M FV GR+F D  LP +   +ERA  Y +   TLA IH LD+    L  FG+  GGY  RQ+  L  V +KQ E+A   PG  EV  D+L  S  PG  + D+  LVHGDF+VDN+VFHPTEPRVIAVLDWELSTLGHP+ADLANL ++  +PA P              +P++GL GLDL ALGIP++ EL+  Y + VGR   DR    A R       AF+FFK AVI  GV+AR  +GVASS+ A  +  + P++V++A+  +   +            +R G+         D+  +    P             V+FD GGVL+ +SPL AI   ER   LP  Y+ VA  +AG E GLFQ LERGE  L D FL ++   L    +  AYV+ VA R +   L                                             I+V  L   I +A+    P M+AA + LR  G++ A+++NDF +   F         +  + +   L      +R          P++ + V+ S+ +  RKP+ RIYE   + LG S + A   +F+DDI  N++AA +  ++ + V+     E +  IV   A+ G+A   G G
Sbjct:   37 IKATKLEGGQSNPTYLL------------------RLQP-----------------SDRQLVLRKKPALVKVASAHAVEREFRVLEALQNSDVPVPPVYHLCEDASVLGTPFYLMGFVEGRIFRDPTLPCIKTSQERAQYYRAMVATLAAIHTLDWRKRSLSTFGKPDGGYFARQLKRLRSVMEKQAENAGYFPGLQEVCSDMLLYSEQPGFKMRDQTCLVHGDFKVDNVVFHPTEPRVIAVLDWELSTLGHPMADLANLAMMFFVPAVP-------------RAPISGLLGLDLEALGIPDEDELVKAYCQLVGRSYPDR----AWR----FYTAFLFFKNAVILQGVEARRQQGVASSKHAIKLLDLAPILVEIARQHLVEAQ------------ERIGQESINNATQEDKKNNVVVSPVKDIEAWAEEVLVVVFDWGGVLTRSSPLAAIRNHERRNGLPAGYLSVAFNSAGDEHGLFQMLERGEVALDDAFLEKWELELTSSRSGQAYVQ-VAHRVKSAELPI-------------------------------------DFRPPYINVRALMYQILSASTTIDPAMLAAVRALRSAGVRTALLTNDFRVAPSFF--------SPADPEGFDL-----WSRLEKIHEIFHDPSIFNFVISSATMRARKPEIRIYEALLQRLGFSKKSASRVLFLDDIGRNLKAARSIDIKTMLVKE----ENKAQIVA--ALEGLARAKGGG 656          
BLAST of mRNA_S-dermatodea_contig11354.871.1 vs. uniprot
Match: A0A7S4JTE3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JTE3_9STRA)

HSP 1 Score: 264 bits (675), Expect = 1.650e-76
Identity = 173/422 (41.00%), Postives = 233/422 (55.21%), Query Frame = 1
Query:   55 GEIITPSSRRLGVSNAWASGVGFEGFDDFRVELKKFPGGQSNPTFLLLVCLSPPLPVRQKSRGDPRATPAAAXXXXXRAAAATEMVTEHRFVLRKKPASVKVSSAHAVEREFRVLRALRET---------------DVPVPQALLLCEDPGVIGTPFYVMEFVNGRVFSDSALPGMGRRERAAAYASAAETLAKIHRLDFVSVGLEGFGRSSGGYLGRQVATLERVAKKQEEDAEPIPGFGEVVKDLLELSPGVPDRVTLVHGDFRVDNLVFHPTEPRVIAVLDWELSTLGHPLADLANLCILHHLPAAPAEAPGGASKGRVKSSPLAGLKGLDLRALGIPEQSELMDVY---REAV----GRDRLAGVAGRGVAELG----LAFIFFKMAVIAHGVKARLSRGVASSESASIVSAMVPVMV 1242
            G++ + S R +GV     +G   E     R+E+++F  GQSNPT+LL+V   P +     S G   +  A +              TE R VLR+KP  V   SAHA+ RE+RVL+ LR                 +VPVP+ +  C D  V+G+ FY+MEFV+GR+F D +LPG     R  AY  A   LA +H +D  +VGL  +GR  GGY+ RQV  L  V+ KQ E   P+ G      DL   S G PD  TL+HGD+++DNLVFHP EPRVIAVLDWELST+G PL DLANL +++++P               K   +AG+ G+DLR  G+PE+ EL+D+Y   R AV    G   + GV    +        LAF+FFK  VI HGV  R+  GVASS +A  V++++P MV
Sbjct:   52 GDVDSHSPREVGVVPP--NGAASEELAS-RMEVRQFGFGQSNPTYLLIVRGCPAVAGDSDSDGGDDSAAAGS--------------TERRLVLRRKPLVVAHKSAHALHREYRVLQCLRRHNLRCRSGGRERASAGEVPVPRPVAYCSDSTVVGSEFYLMEFVSGRIFVDPSLPGTSPDHRRRAYDDAVRVLANVHAVDVDAVGLGDYGRR-GGYVSRQVRRLSAVSAKQAEVVGPVDGLDVAAADLSAGSGGCPDESTLIHGDYKIDNLVFHPVEPRVIAVLDWELSTIGDPLCDLANLSMMYYMPTLD------------KGLGIAGVGGMDLRGTGVPEREELVDMYCRWRSAVKGGSGGGSVGGVIDPALVHAWSGFYLAFLFFKNCVIVHGVAQRVRTGVASSAAAEKVASLLPEMV 443          
BLAST of mRNA_S-dermatodea_contig11354.871.1 vs. uniprot
Match: A0A1Y2GPD5_9FUNG (Kinase-like domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GPD5_9FUNG)

HSP 1 Score: 250 bits (639), Expect = 1.960e-72
Identity = 149/319 (46.71%), Postives = 207/319 (64.89%), Query Frame = 1
Query:  322 RFVLRKKPASVKVSS-AHAVEREFRVLRALRE-TDVPVPQALLLCEDPGVIGTPFYVMEFVNGRVFSDSALPGMGRRERAAAYASAAETLAKIHRLDFVSVGLEGFGRSSGGYLGRQVATLERVAKKQE--EDAE-----PIPGFGEVVKDLLELSPGVPDRVTLVHGDFRVDNLVFHPTEPRVIAVLDWELSTLGHPLADLANLCILHHLPAAPAEAPGGASKGRVKSSPLAGLKGLDLRALGIPEQSELMDVYREAVGRDRLAGVAGRGVAELGLAFIFFKMAVIAHGVKARLSRGVASSESASIVSAMVPVMVDLA 1251
            R+VLRKKPA   +SS AHAVERE+R+L+AL E +DVPVP+   LCED  +IGTPFYVMEF+ GR+FSD  L  +   ER   + SA +TLAK+H++D+V+VGLEG+G+ SG Y  RQ+A+L +V+  Q   +DA+     PIPG  E+     +    V D  ++VHGD+++DNLVFHPTEPRVI +LDWELST+GHP +DLANL   +++PA             +  +P+ GLKG+  + L IP    L++ Y +   R               +AF FF++AVI HG+KAR++RG ASS  A + +A+V  + +LA
Sbjct:   62 RYVLRKKPAGTLLSSTAHAVEREYRILKALGEKSDVPVPKVYTLCEDSSIIGTPFYVMEFLQGRIFSDVTLKKLPFEERRLCWISAIDTLAKLHKVDYVAVGLEGYGKPSGFYP-RQIASLSKVSAAQAAVKDADGKEVGPIPGMEELAAWFKKYE--VKDSTSIVHGDYKMDNLVFHPTEPRVIGILDWELSTIGHPFSDLANLVNPYYVPA-------------MDGNPIGGLKGIPEKDLPIPPVDVLLERYCQQTSRPFPIENW-----MFCIAFSFFRLAVILHGIKARVARGQASSAEAMVYAALVDSVAELA 359          
BLAST of mRNA_S-dermatodea_contig11354.871.1 vs. uniprot
Match: A0A448YZL2_9STRA (APH domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZL2_9STRA)

HSP 1 Score: 248 bits (634), Expect = 3.260e-71
Identity = 156/383 (40.73%), Postives = 222/383 (57.96%), Query Frame = 1
Query:  145 VELKKFPGGQSNPTFLLLVCLSPPLPVRQKSRGDPRATPAAAXXXXXRAAAATEMVTEHRFVLRKKPASVKVSSAHAVEREFRVLRAL--------RETDVPVPQALLLCEDPGVIGTPFYVMEFVNGRVFSDSALPGMGRRERAAAYASAAETLAKIHRLDFVSVGLEGFGRSSGGYLGRQVATLERVAKKQEE-DAEPIPGFGEVVKDLLELSPGVPDRVTLVHGDFRVDNLVFHPTEPRVIAVLDWELSTLGHPLADLANLCILHHLPAAPAEAPGGASKGRVKSSPLAGLKGLDLRALGIPEQSELMDVY-REAVGRDRLAGVAGRGVAELG---LAFIFFKMAVIAHGVKARLSRGVASSESASIVSAMVPVMVDLAK 1254
            +E+++F  GQSNPT+LL           Q  R D  A  AA                  R VLR+KP+SV   SAHA+ REF+VLR L        ++  VPVP     C++  VIG  FY+MEFV GR+++DS++PGM   ER  A+ S    +A +H +D  SVGL  +G+  G Y+ RQ+  L+ V+++Q E    P P    + + L E + G P+R++L+HGDF++DNLVFHPTEPRVIAVLDWELST+G  L DLANLC+++ +P             + K + ++G+ GLDLR+L IP + EL+ +Y R  +  DR   ++   V +     LAF+ FK AVI  GV  R   GVASS  A+ V+  +P++  +A+
Sbjct:   52 MEIRQFGFGQSNPTYLL-----------QIGRSDKDAPSAA----------------PFRAVLRRKPSSVAHPSAHALHREFQVLRGLQKHNQQKTKDEHVPVPHPYAYCKEKSVIGAEFYLMEFVPGRIYTDSSMPGMTNTERKRAFESVVTVMANLHGVDVRSVGLGSYGKG-GKYVQRQLDRLKAVSRRQAELSGTPAPEIERLARQLGEFAAGCPNRISLLHGDFKIDNLVFHPTEPRVIAVLDWELSTVGDSLCDLANLCVMYLMP-------------QSKKAAISGVAGLDLRSLAIPTRKELLGMYSRHRIQTDRTTTISLEEVQKWSGFYLAFVTFKNAVIVQGVAQRAKAGVASSARANEVAKALPLICMMAQ 393          
BLAST of mRNA_S-dermatodea_contig11354.871.1 vs. uniprot
Match: UPI00192AFF02 (phosphotransferase family protein n=4 Tax=Skermanella TaxID=204447 RepID=UPI00192AFF02)

HSP 1 Score: 244 bits (624), Expect = 1.550e-70
Identity = 154/376 (40.96%), Postives = 204/376 (54.26%), Query Frame = 1
Query:  145 VELKKFPGGQSNPTFLLLVCLSPPLPVRQKSRGDPRATPAAAXXXXXRAAAATEMVTEHRFVLRKKPASVKVSSAHAVEREFRVLRALRETDVPVPQALLLCEDPGVIGTPFYVMEFVNGRVFSDSALPGMGRRERAAAYASAAETLAKIHRLDFVSVGLEGFGRSSGGYLGRQVATLERVAKKQEEDAEPIPGFGEVVKDL-LELSPGVPDRVTLVHGDFRVDNLVFHPTEPRVIAVLDWELSTLGHPLADLANLCILHHLPAAPAEAPGGASKGRVKSSPLAGLKGLDLRALGIPEQSELMDVYREAVGRDRLAGVAGRGVAELGLAFIFFKMAVIAHGVKARLSRGVASSESASIVSAMVPVMVDLAKGQISA 1269
            V +K+F GGQSNPTFL+                    TP                  + R+VLRKKP    + SAH +ERE++V+  L+ T  PV    LLCED  +IGT FYVM+FV GR+F D ALPGM   ERA  + +  +TLA++H +D+ + GL  +G+    Y+GRQ+    R  + Q    EP+P    +++ L     PG  D   + HGDFR+DN++FHPTEPRV+AVLDWELSTLGHPLADLA  C++ HLPA                  L GL GLDL ALG+P + E +  Y    GR      +G       +AF  F++A IA GV+AR  +G ASS  A  V  M P++ +L   Q  A
Sbjct:   41 VTIKQFKGGQSNPTFLI-------------------DTP------------------DRRYVLRKKPPGTLLPSAHLIEREYKVMAGLKGTGFPVATPHLLCEDTTIIGTAFYVMDFVEGRIFWDPALPGMSADERAGIFDAMNDTLARLHSVDWRAAGLANYGKPDN-YIGRQIDRWTR--QYQAARTEPMPAMDRLIEWLPANRPPG--DETAIAHGDFRIDNMIFHPTEPRVLAVLDWELSTLGHPLADLAYNCMIWHLPAG--------------QRALTGLGGLDLAALGLPTEDEYVAAYARRTGR------SGIDDWRFYMAFGLFRIAAIAEGVRARALQGNASSPDADAVGGMAPLLAELGWQQARA 354          
BLAST of mRNA_S-dermatodea_contig11354.871.1 vs. uniprot
Match: A0A219B2S6_9SPHN (Phosphotransferase family protein n=1 Tax=Pacificimonas flava TaxID=1234595 RepID=A0A219B2S6_9SPHN)

HSP 1 Score: 242 bits (617), Expect = 1.690e-69
Identity = 146/350 (41.71%), Postives = 202/350 (57.71%), Query Frame = 1
Query:  145 VELKKFPGGQSNPTFLLLVCLSPPLPVRQKSRGDPRATPAAAXXXXXRAAAATEMVTEHRFVLRKKPASVKVSSAHAVEREFRVLRALRETDVPVPQALLLCEDPGVIGTPFYVMEFVNGRVFSDSALPGMGRRERAAAYASAAETLAKIHRLDFVSVGLEGFGRSSGGYLGRQVATLERVAKKQEEDAEPIPGFGEVVKDLLELSPGVPDRVTLVHGDFRVDNLVFHPTEPRVIAVLDWELSTLGHPLADLANLCILHHLPAAPAEAPGGASKGRVKSSPLAG-LKGLDLRALGIPEQSELMDVYREAVGRDRLAGVAGRGVAELGLAFIFFKMAVIAHGVKARLSRGV 1191
            +E+++F GG SNPTFLL             + GD                        HR+VLRKKP    + SAH V+RE+RV++AL ET VPVP    +C+DP VIGT FYVM+F+ GR+F D++LPGM   ERAA Y     TLAK+H +D+ +VGLEGFG+  G Y  RQVA   R  + ++   +P+P   +++++L +  P   D V++ HGD+R++N++FHPTEP+++AVLDWELST+GHPLADL     L H                   SP+ G L G+DL   GIP ++E ++ YR   GRD + G          LAF  F++A I+HGV AR   G+
Sbjct:   44 LEVRQFAGGASNPTFLL-------------TSGD------------------------HRYVLRKKPPGQLLQSAHQVDREYRVMKALGETGVPVPVMRGICDDPEVIGTSFYVMDFLEGRIFRDASLPGMSPDERAAIYDELNATLAKLHVVDWRAVGLEGFGKP-GNYFERQVARWAR--QYRDAPLDPVPAMDQLIEELPDHIPD-DDSVSIAHGDYRLENVMFHPTEPKLVAVLDWELSTIGHPLADLGYSGFLWH-----------------SHSPVWGSLDGVDLETSGIPTEAEWVEAYRRRTGRDEIVGW------NFLLAFSVFRLASISHGVHARALAGI 329          
BLAST of mRNA_S-dermatodea_contig11354.871.1 vs. uniprot
Match: U4KUM1_PYROM (Similar to Acyl-CoA dehydrogenase family member 10 acc. no. Q6JQN1 n=1 Tax=Pyronema omphalodes (strain CBS 100304) TaxID=1076935 RepID=U4KUM1_PYROM)

HSP 1 Score: 242 bits (617), Expect = 2.260e-69
Identity = 147/389 (37.79%), Postives = 222/389 (57.07%), Query Frame = 1
Query:  145 VELKKFPGGQSNPTFLLLVCLSPPLPVRQKSRGDPRATPAAAXXXXXRAAAATEMVTEHRFVLRKKPASVKVS-SAHAVEREFRVLRALRETDVPVPQALLLCEDPGVIGTPFYVMEFVNGRVFSDSALPGMGRRERAAAYASAAETLAKIHRLDFVSVGLEGFGRSSGGYLGRQVATLERVAKKQEE--DAE------PIPGFGEVVKDLLELSPGVPDRVTLVHGDFRVDNLVFHPTEPRVIAVLDWELSTLGHPLADLANLCILHHLPAAPAEAPGGASKGRVKSSPLAGLKGLDLRALGIPEQSELMDVYREAVGRDRLAGVAGRGVAELGLAFIFFKMAVIAHGVKARLSRGVASSESASIVSAMVPVMVDLAKGQISALRRTR 1284
            +++K+F  GQSNPT+LL                                    +  T  ++VLRKKP    ++ +AHAVERE+RVL AL  T VPVP A++LCED  +IGTPFY+M+FV GR+FS+ ++PG+   +R   + SA ETLA +H++DF  VGLE +G+ +G YL RQ+ TL  ++K Q E  D E      PIP F E ++   E  P   DR T++HGD+++DNL+FHP+EP VI +LDWELSTLGHPL+D+ NL   +   A P+ +    ++  V+            +  G+P + E + +Y++A G + + G+      + GLAF+  + +VI  G+ AR +R  ASSE+A +   + P + + A   +   ++ R
Sbjct:   28 LDIKQFGYGQSNPTYLL------------------------------------QCATGAQYVLRKKPPGTLLNPTAHAVEREYRVLAALTPTSVPVPNAIILCEDVSIIGTPFYIMDFVGGRIFSNPSIPGVSAEDRNKMWRSALETLAGLHKIDFKEVGLEKYGKPNGFYL-RQIKTLSTISKAQGETKDVETGKEVGPIPNFAENMQYFSESLPY--DRTTIIHGDYKIDNLIFHPSEPHVIGILDWELSTLGHPLSDVCNLLSPYLFAANPSASMSPDAEAFVEG-----------KTPGLPTREEAVGIYQKAAGME-IEGL------DWGLAFMLCRNSVITQGISARYARRQASSENAGMYEQLTPRLAEYATALVKVDKKRR 359          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11354.871.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L392_9PHAE2.860e-25155.42APH domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LKT3_ECTSI1.880e-23956.36APH domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z1G4_9STRA9.020e-14841.81Phosphotransferase enzyme family-domain-containing... [more]
A0A4D9CXK6_9STRA1.730e-10736.91APH domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S4JTE3_9STRA1.650e-7641.00Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1Y2GPD5_9FUNG1.960e-7246.71Kinase-like domain-containing protein n=1 Tax=Lobo... [more]
A0A448YZL2_9STRA3.260e-7140.73APH domain-containing protein n=1 Tax=Pseudo-nitzs... [more]
UPI00192AFF021.550e-7040.96phosphotransferase family protein n=4 Tax=Skermane... [more]
A0A219B2S6_9SPHN1.690e-6941.71Phosphotransferase family protein n=1 Tax=Pacifici... [more]
U4KUM1_PYROM2.260e-6937.79Similar to Acyl-CoA dehydrogenase family member 10... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11354contigS-dermatodea_contig11354:3551..6935 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score707.6
Seed ortholog evalue6.4e-201
Seed eggNOG ortholog2880.D8LKT3
KEGG koko:K11729
EggNOG free text desc.Phosphotransferase enzyme family
EggNOG OGs2QQPX@2759,COG3173@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHAD-like domain
Ec32 orthologEc-11_005440.1
Exons2
Model size2322
Cds size2322
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924198.9183059-CDS-S-dermatodea_contig11354:3550..51731622924198.9183059-CDS-S-dermatodea_contig11354:3550..5173Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11354 3551..5173 -
1694079086.669952-CDS-S-dermatodea_contig11354:3550..51731694079086.669952-CDS-S-dermatodea_contig11354:3550..5173Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11354 3551..5173 -
1622924198.9262402-CDS-S-dermatodea_contig11354:6236..69351622924198.9262402-CDS-S-dermatodea_contig11354:6236..6935Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11354 6237..6935 -
1694079086.6873362-CDS-S-dermatodea_contig11354:6236..69351694079086.6873362-CDS-S-dermatodea_contig11354:6236..6935Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11354 6237..6935 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11354.871.1prot_S-dermatodea_contig11354.871.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11354 3551..6935 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11354.871.1

>prot_S-dermatodea_contig11354.871.1 ID=prot_S-dermatodea_contig11354.871.1|Name=mRNA_S-dermatodea_contig11354.871.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=774bp
MAIDFPLAPLHRYLWDHLGEIITPSSRRLGVSNAWASGVGFEGFDDFRVE
LKKFPGGQSNPTFLLLVCLSPPLPVRQKSRGDPRATPAAAAAADARAAAA
TEMVTEHRFVLRKKPASVKVSSAHAVEREFRVLRALRETDVPVPQALLLC
EDPGVIGTPFYVMEFVNGRVFSDSALPGMGRRERAAAYASAAETLAKIHR
LDFVSVGLEGFGRSSGGYLGRQVATLERVAKKQEEDAEPIPGFGEVVKDL
LELSPGVPDRVTLVHGDFRVDNLVFHPTEPRVIAVLDWELSTLGHPLADL
ANLCILHHLPAAPAEAPGGASKGRVKSSPLAGLKGLDLRALGIPEQSELM
DVYREAVGRDRLAGVAGRGVAELGLAFIFFKMAVIAHGVKARLSRGVASS
ESASIVSAMVPVMVDLAKGQISALRRTRAHDADDDGGDRGGESDSGGGGG
NDRHKSKPQRPRPKAVLFDVGGVLSTSPLLAISRFERETRLPPSYIGVAI
AAGGEDGLFQRLERGEERLGDRFLGRFAEYLCGDHAKLAYVEYVARRARG
RSLSTLVVSAAADIAEIGSVEPSAEGSVGAAAAAAVAKAKTAVAAVVSID
VLELFRAITAAAAVPVPEMIAAAKTLRHRGLKVAVVSNDFLLEKGFVLGG
QRRSRAGTERDSDSLRHAAAGARQASGGVYSQLPALCDAVVLSSVVGRRK
PDRRIYEDACESLGVSPREAVFVDDIRANVRAAEACGMQAVWVRPGGSVE
GRRAIVELQAITGVALTTGDGYTR
back to top

mRNA from alignment at S-dermatodea_contig11354:3551..6935-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11354.871.1 ID=mRNA_S-dermatodea_contig11354.871.1|Name=mRNA_S-dermatodea_contig11354.871.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3385bp|location=Sequence derived from alignment at S-dermatodea_contig11354:3551..6935- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCGATCGACTTTCCTCTCGCTCCCCTGCATCGATACCTGTGGGATCA CCTCGGGGAGATCATCACGCCGTCGTCCCGCAGGCTCGGCGTGAGCAACG CGTGGGCCTCCGGCGTGGGCTTCGAGGGCTTCGACGACTTCCGCGTGGAG CTCAAGAAGTTTCCCGGCGGGCAGTCGAACCCGACATTCTTGCTGCTGGT CTGCCTCTCGCCTCCGCTACCCGTCCGTCAAAAATCGCGCGGAGACCCGA GGGCGACACCTGCGGCGGCGGCGGCGGCGGACGCGAGAGCGGCAGCGGCG ACGGAGATGGTCACGGAGCACCGCTTCGTTCTGCGCAAGAAACCGGCCAG CGTGAAGGTGTCCTCGGCGCACGCGGTCGAGCGCGAGTTTCGCGTCCTCC GAGCGCTTCGGGAGACCGACGTCCCCGTGCCTCAAGCGTTGCTGCTCTGC GAGGACCCGGGCGTCATCGGCACGCCGTTCTACGTCATGGAGTTCGTCAA CGGCCGCGTTTTTTCCGACTCGGCGCTGCCGGGCATGGGACGGCGTGAGC GGGCGGCGGCCTACGCGAGCGCCGCGGAGACGCTGGCGAAGATCCACCGG TTGGATTTTGTCTCTGTGGGTCTGGAAGGGTTCGGGCGCAGTTCCGGTGG CTACTTGGGTCGGCAGGTGGCGACGCTCGAGCGGGTCGCTAAGAAGCAGG TGCGCTGTTCGAAAAAGCGACCCCCCCCCCGCCTGGGAGTGGTGTGGAAT TTGTTTTGTGTGCATTCGAAACATGCTGTAGTACTTGTAAACATGTTTTT GACTGCGACAGCGTGATAGGCGCATCCGTCCCAACTAACTGTGCTGCGTC GATGATGATGTGTCCCGTGATGCGAGTAGGGCTGCTGGCGCGGGGGGGGG GGAGGAGGTGTTTGTTTGGTCGTGTATCGGTCATGAAAATATCGCGGTTG CCACCTTTTTCTCCTACTGCTTTTGGGACTAAGGCTGTTTTCGGATAACT GTTTGCTATTATTATATACGCTTTTGTTTTGGGGCTAAAGCTGTTTCCGG GTGACTGTTTGCTATTATGGTAGCCAACAGTTACCCGGAAACAGGCTTTG TCCCCTGGCTTAGTCCCAAAAGGGTAATTCATAATAGCAAACAGATGCCC GAAAACAGCTTAGTCCCAAAAGGGTTAAGGCGTTCCTTTGCTCCTCCAAA CGTACGTTGACATCGAATATTATGGGATTATATTATATGTAAACCTGATA AAGGTATTAGTGCAGCAGGCACTGCAGGTGCTCTCTCCCTTTAGGCCGAT CAACCTTCAGGACACGCGTCGCGCACTACGACGAGACACGCGCTTGTAGT CTCCCACGTTCCAAAGACCATCGCGCACCGTCGTCGGCGATAATTTCCAT GCACTTAAAAAAACAAAAAAACACACACACACACATACACACCGAGGGTT ATGTTCTCTCTGTTTAAGAGCTTTTGTGGTTCATTCTTTCTCACATTACA CTCTATAGGGCGATCTAAAATCCTAAGTAAGTGGTATATTTTCGAATTAT CGAATTCTCCTGTGGCCACGGGGCGGAATCGGCAACCAAACATTGGTTGG CGGAACCTATTGGTCTGCTGTAACAGCGCGATTTAGTATATATATCAATC AATCAATCAATCAATCAATCAATCCATCAATCAAAATCAACCAACACAGG CGCACTCACACTCAGAGTCACAATCACACTCACACTTACACTCAACACAC TCCGTGCAACAGGAGGAGGACGCCGAGCCCATCCCCGGGTTCGGAGAGGT CGTCAAAGACCTGCTCGAGCTCAGCCCCGGCGTGCCCGACCGCGTCACCC TCGTCCACGGCGACTTCCGCGTCGACAACCTCGTCTTCCACCCAACGGAG CCCCGCGTTATCGCGGTTCTGGACTGGGAGCTCTCCACGCTCGGGCACCC CTTGGCGGACCTCGCCAACCTCTGCATCTTGCACCATCTCCCAGCCGCTC CGGCAGAGGCACCGGGGGGGGCTAGCAAAGGCCGTGTCAAGTCTTCACCG CTAGCGGGGCTGAAAGGGTTGGACCTCCGCGCCCTCGGCATCCCGGAACA GTCGGAGCTCATGGACGTGTACCGCGAGGCCGTCGGCCGGGATCGCTTGG CCGGAGTGGCGGGGCGAGGCGTCGCGGAACTCGGGCTCGCGTTCATATTC TTCAAGATGGCAGTGATCGCGCACGGGGTGAAGGCGCGGCTGTCGCGGGG CGTGGCGAGCTCCGAGTCAGCGTCGATCGTGTCCGCCATGGTGCCCGTGA TGGTGGATTTGGCTAAGGGGCAAATATCCGCGCTAAGGCGGACCCGAGCG CACGATGCCGACGACGACGGGGGCGATCGTGGCGGGGAAAGCGACAGCGG AGGGGGCGGAGGTAACGACAGGCATAAGAGCAAACCGCAACGCCCGCGGC CGAAAGCCGTCCTTTTCGACGTTGGTGGCGTGCTGAGCACGAGCCCTTTG CTGGCGATTTCACGGTTCGAGCGAGAGACCCGTCTGCCGCCGTCGTACAT CGGCGTCGCAATCGCCGCCGGCGGCGAGGACGGCCTCTTCCAGAGGCTGG AGAGGGGCGAAGAACGGCTCGGGGATCGGTTCTTGGGACGATTCGCGGAG TACCTGTGCGGCGACCACGCAAAGCTCGCGTACGTGGAGTACGTTGCGAG GCGGGCAAGAGGCCGTTCGTTGTCTACGTTGGTCGTTTCCGCCGCGGCAG ACATCGCTGAGATTGGTTCGGTGGAACCTTCGGCAGAAGGATCGGTGGGG GCGGCGGCGGCGGCGGCGGTGGCAAAAGCGAAGACCGCGGTGGCGGCCGT TGTGAGCATAGACGTTTTGGAGCTGTTCCGCGCAATCACTGCCGCGGCTG CTGTGCCGGTCCCCGAGATGATCGCCGCAGCAAAGACCCTGCGCCACCGG GGGTTGAAGGTAGCGGTGGTGTCCAACGATTTTTTGCTTGAGAAAGGATT CGTTCTTGGCGGGCAGCGACGCAGCAGAGCAGGAACAGAAAGAGACAGCG ACAGCTTGCGACACGCTGCTGCGGGCGCGCGGCAAGCTAGCGGCGGCGTT TACTCCCAGCTCCCGGCCCTGTGTGACGCGGTGGTGCTATCCAGCGTGGT GGGTCGCCGCAAACCGGATCGGCGGATCTACGAAGACGCCTGCGAATCGC TTGGGGTTTCCCCCCGCGAGGCGGTTTTCGTTGACGACATACGGGCTAAC GTTCGCGCCGCCGAGGCGTGCGGCATGCAGGCCGTGTGGGTGCGGCCCGG CGGATCTGTGGAAGGGAGAAGAGCTATCGTGGAGCTGCAAGCCATCACCG GCGTGGCGCTGACTACTGGGGACGGATACACTCGC
back to top

Coding sequence (CDS) from alignment at S-dermatodea_contig11354:3551..6935-

>mRNA_S-dermatodea_contig11354.871.1 ID=mRNA_S-dermatodea_contig11354.871.1|Name=mRNA_S-dermatodea_contig11354.871.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=4644bp|location=Sequence derived from alignment at S-dermatodea_contig11354:3551..6935- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCGATCGACTTTCCTCTCGCTCCCCTGCATCGATACCTGTGGGATCA
CCTCGGGGAGATCATCACGCCGTCGTCCCGCAGGCTCGGCGTGAGCAACG
CGTGGGCCTCCGGCGTGGGCTTCGAGGGCTTCGACGACTTCCGCGTGGAG
CTCAAGAAGTTTCCCGGCGGGCAGTCGAACCCGACATTCTTGCTGCTGGT
CTGCCTCTCGCCTCCGCTACCCGTCCGTCAAAAATCGCGCGGAGACCCGA
GGGCGACACCTGCGGCGGCGGCGGCGGCGGACGCGAGAGCGGCAGCGGCG
ACGGAGATGGTCACGGAGCACCGCTTCGTTCTGCGCAAGAAACCGGCCAG
CGTGAAGGTGTCCTCGGCGCACGCGGTCGAGCGCGAGTTTCGCGTCCTCC
GAGCGCTTCGGGAGACCGACGTCCCCGTGCCTCAAGCGTTGCTGCTCTGC
GAGGACCCGGGCGTCATCGGCACGCCGTTCTACGTCATGGAGTTCGTCAA
CGGCCGCGTTTTTTCCGACTCGGCGCTGCCGGGCATGGGACGGCGTGAGC
GGGCGGCGGCCTACGCGAGCGCCGCGGAGACGCTGGCGAAGATCCACCGG
TTGGATTTTGTCTCTGTGGGTCTGGAAGGGTTCGGGCGCAGTTCCGGTGG
CTACTTGGGTCGGCAGGTGGCGACGCTCGAGCGGGTCGCTAAGAAGCAGA
TGGCGATCGACTTTCCTCTCGCTCCCCTGCATCGATACCTGTGGGATCAC
CTCGGGGAGATCATCACGCCGTCGTCCCGCAGGCTCGGCGTGAGCAACGC
GTGGGCCTCCGGCGTGGGCTTCGAGGGCTTCGACGACTTCCGCGTGGAGC
TCAAGAAGTTTCCCGGCGGGCAGTCGAACCCGACATTCTTGCTGCTGGTC
TGCCTCTCGCCTCCGCTACCCGTCCGTCAAAAATCGCGCGGAGACCCGAG
GGCGACACCTGCGGCGGCGGCGGCGGCGGACGCGAGAGCGGCAGCGGCGA
CGGAGATGGTCACGGAGCACCGCTTCGTTCTGCGCAAGAAACCGGCCAGC
GTGAAGGTGTCCTCGGCGCACGCGGTCGAGCGCGAGTTTCGCGTCCTCCG
AGCGCTTCGGGAGACCGACGTCCCCGTGCCTCAAGCGTTGCTGCTCTGCG
AGGACCCGGGCGTCATCGGCACGCCGTTCTACGTCATGGAGTTCGTCAAC
GGCCGCGTTTTTTCCGACTCGGCGCTGCCGGGCATGGGACGGCGTGAGCG
GGCGGCGGCCTACGCGAGCGCCGCGGAGACGCTGGCGAAGATCCACCGGT
TGGATTTTGTCTCTGTGGGTCTGGAAGGGTTCGGGCGCAGTTCCGGTGGC
TACTTGGGTCGGCAGGTGGCGACGCTCGAGCGGGTCGCTAAGAAGCAGGA
GGAGGACGCCGAGCCCATCCCCGGGTTCGGAGAGGTCGTCAAAGACCTGC
TCGAGCTCAGCCCCGGCGTGCCCGACCGCGTCACCCTCGTCCACGGCGAC
TTCCGCGTCGACAACCTCGTCTTCCACCCAACGGAGCCCCGCGTTATCGC
GGTTCTGGACTGGGAGCTCTCCACGCTCGGGCACCCCTTGGCGGACCTCG
CCAACCTCTGCATCTTGCACCATCTCCCAGCCGCTCCGGCAGAGGCACCG
GGGGGGGCTAGCAAAGGCCGTGTCAAGTCTTCACCGCTAGCGGGGCTGAA
AGGGTTGGACCTCCGCGCCCTCGGCATCCCGGAACAGTCGGAGCTCATGG
ACGTGTACCGCGAGGCCGTCGGCCGGGATCGCTTGGCCGGAGTGGCGGGG
CGAGGCGTCGCGGAACTCGGGCTCGCGTTCATATTCTTCAAGATGGCAGT
GATCGCGCACGGGGTGAAGGCGCGGCTGTCGCGGGGCGTGGCGAGCTCCG
AGTCAGCGTCGATCGTGTCCGCCATGGTGCCCGTGATGGTGGATTTGGCT
AAGGGGCAAATATCCGCGCTAAGGCGGACCCGAGCGCACGATGCCGACGA
CGACGGGGGCGATCGTGGCGGGGAAAGCGACAGCGGAGGGGGCGGAGGTA
ACGACAGGCATAAGAGCAAACCGCAACGCCCGCGGCCGAAAGCCGTCCTT
TTCGACGTTGGTGGCGTGCTGAGCACGAGCCCTTTGCTGGCGATTTCACG
GTTCGAGCGAGAGACCCGTCTGCCGCCGTCGTACATCGGCGTCGCAATCG
CCGCCGGCGGCGAGGACGGCCTCTTCCAGAGGCTGGAGAGGGGCGAAGAA
CGGCTCGGGGATCGGTTCTTGGGACGATTCGCGGAGTACCTGTGCGGCGA
CCACGCAAAGCTCGCGTACGTGGAGTACGTTGCGAGGCGGGCAAGAGGCC
GTTCGTTGTCTACGTTGGTCGTTTCCGCCGCGGCAGACATCGCTGAGATT
GGTTCGGTGGAACCTTCGGCAGAAGGATCGGTGGGGGCGGCGGCGGCGGC
GGCGGTGGCAAAAGCGAAGACCGCGGTGGCGGCCGTTGTGAGCATAGACG
TTTTGGAGCTGTTCCGCGCAATCACTGCCGCGGCTGCTGTGCCGGTCCCC
GAGATGATCGCCGCAGCAAAGACCCTGCGCCACCGGGGGTTGAAGGTAGC
GGTGGTGTCCAACGATTTTTTGCTTGAGAAAGGATTCGTTCTTGGCGGGC
AGCGACGCAGCAGAGCAGGAACAGAAAGAGACAGCGACAGCTTGCGACAC
GCTGCTGCGGGCGCGCGGCAAGCTAGCGGCGGCGTTTACTCCCAGCTCCC
GGCCCTGTGTGACGCGGTGGTGCTATCCAGCGTGGTGGGTCGCCGCAAAC
CGGATCGGCGGATCTACGAAGACGCCTGCGAATCGCTTGGGGTTTCCCCC
CGCGAGGCGGTTTTCGTTGACGACATACGGGCTAACGTTCGCGCCGCCGA
GGCGTGCGGCATGCAGGCCGTGTGGGTGCGGCCCGGCGGATCTGTGGAAG
GGAGAAGAGCTATCGTGGAGCTGCAAGCCATCACCGGCGTGGCGCTGACT
ACTGGGGACGGATACACTCGCGAGGAGGACGCCGAGCCCATCCCCGGGTT
CGGAGAGGTCGTCAAAGACCTGCTCGAGCTCAGCCCCGGCGTGCCCGACC
GCGTCACCCTCGTCCACGGCGACTTCCGCGTCGACAACCTCGTCTTCCAC
CCAACGGAGCCCCGCGTTATCGCGGTTCTGGACTGGGAGCTCTCCACGCT
CGGGCACCCCTTGGCGGACCTCGCCAACCTCTGCATCTTGCACCATCTCC
CAGCCGCTCCGGCAGAGGCACCGGGGGGGGCTAGCAAAGGCCGTGTCAAG
TCTTCACCGCTAGCGGGGCTGAAAGGGTTGGACCTCCGCGCCCTCGGCAT
CCCGGAACAGTCGGAGCTCATGGACGTGTACCGCGAGGCCGTCGGCCGGG
ATCGCTTGGCCGGAGTGGCGGGGCGAGGCGTCGCGGAACTCGGGCTCGCG
TTCATATTCTTCAAGATGGCAGTGATCGCGCACGGGGTGAAGGCGCGGCT
GTCGCGGGGCGTGGCGAGCTCCGAGTCAGCGTCGATCGTGTCCGCCATGG
TGCCCGTGATGGTGGATTTGGCTAAGGGGCAAATATCCGCGCTAAGGCGG
ACCCGAGCGCACGATGCCGACGACGACGGGGGCGATCGTGGCGGGGAAAG
CGACAGCGGAGGGGGCGGAGGTAACGACAGGCATAAGAGCAAACCGCAAC
GCCCGCGGCCGAAAGCCGTCCTTTTCGACGTTGGTGGCGTGCTGAGCACG
AGCCCTTTGCTGGCGATTTCACGGTTCGAGCGAGAGACCCGTCTGCCGCC
GTCGTACATCGGCGTCGCAATCGCCGCCGGCGGCGAGGACGGCCTCTTCC
AGAGGCTGGAGAGGGGCGAAGAACGGCTCGGGGATCGGTTCTTGGGACGA
TTCGCGGAGTACCTGTGCGGCGACCACGCAAAGCTCGCGTACGTGGAGTA
CGTTGCGAGGCGGGCAAGAGGCCGTTCGTTGTCTACGTTGGTCGTTTCCG
CCGCGGCAGACATCGCTGAGATTGGTTCGGTGGAACCTTCGGCAGAAGGA
TCGGTGGGGGCGGCGGCGGCGGCGGCGGTGGCAAAAGCGAAGACCGCGGT
GGCGGCCGTTGTGAGCATAGACGTTTTGGAGCTGTTCCGCGCAATCACTG
CCGCGGCTGCTGTGCCGGTCCCCGAGATGATCGCCGCAGCAAAGACCCTG
CGCCACCGGGGGTTGAAGGTAGCGGTGGTGTCCAACGATTTTTTGCTTGA
GAAAGGATTCGTTCTTGGCGGGCAGCGACGCAGCAGAGCAGGAACAGAAA
GAGACAGCGACAGCTTGCGACACGCTGCTGCGGGCGCGCGGCAAGCTAGC
GGCGGCGTTTACTCCCAGCTCCCGGCCCTGTGTGACGCGGTGGTGCTATC
CAGCGTGGTGGGTCGCCGCAAACCGGATCGGCGGATCTACGAAGACGCCT
GCGAATCGCTTGGGGTTTCCCCCCGCGAGGCGGTTTTCGTTGACGACATA
CGGGCTAACGTTCGCGCCGCCGAGGCGTGCGGCATGCAGGCCGTGTGGGT
GCGGCCCGGCGGATCTGTGGAAGGGAGAAGAGCTATCGTGGAGCTGCAAG
CCATCACCGGCGTGGCGCTGACTACTGGGGACGGATACACTCGC
back to top