mRNA_S-dermatodea_contig11349.866.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11349.866.1
Unique NamemRNA_S-dermatodea_contig11349.866.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig11349.866.1 vs. uniprot
Match: D7FIH0_ECTSI (ABC transporter-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH0_ECTSI)

HSP 1 Score: 489 bits (1259), Expect = 1.110e-164
Identity = 244/295 (82.71%), Postives = 259/295 (87.80%), Query Frame = 1
Query:   25 INPINVLPSQLLSTRVDLLSTEYIEELRQLQDDVPGFGGQRAIQIIESELGAPISELFDTFNSTSLAAASLGQVHEAWLDGKRYAVKVQRPGLKELFEVDLKSIGALASVLDRFDPKLDGASRDWGAIFRESSRVLYEEVDYMREGENAERFSENFKGTEWIKAPSINWSRSTSKVLCMEFLQGIKITDVDKIEAAGVDRSLLAKRTAECYLAQLCRHGFFHCDPHPGNAVMVFISGNLACDAVGGGRIIFYDFGMMDELSVPLKREFVNLIFGIYGNSVKEVVDSLEGMDVIRK 909
            + P  +   QLLSTRVDLLSTEYIEEL+QLQD+VPGFGG +A+ IIE ELGAPI +LFD FNSTSLAAASLGQVHEAWLDGKRYAVKVQRPGLK LFEVDL SIGALA +LDRFDPKLDGASRDWGAIFRESSRVLYEEVDY REG+NAERFSENFKGTEWIKAP INWSRS+SKVLCME++QGIKI DVD IE AGVDR+LLA RTAECYL QL RHGFFHCDPHPGN         LACDAV GGRIIFYDFGMMDEL+VPLKR F NLIFGIYGN +KEVVDSLE MDVIRK
Sbjct:  319 LGPTFIKIGQLLSTRVDLLSTEYIEELQQLQDNVPGFGGAKAVSIIEKELGAPIDQLFDKFNSTSLAAASLGQVHEAWLDGKRYAVKVQRPGLKRLFEVDLNSIGALAGILDRFDPKLDGASRDWGAIFRESSRVLYEEVDYTREGKNAERFSENFKGTEWIKAPGINWSRSSSKVLCMEYVQGIKINDVDAIEKAGVDRALLATRTAECYLEQLIRHGFFHCDPHPGN---------LACDAVDGGRIIFYDFGMMDELTVPLKRSFSNLIFGIYGNDLKEVVDSLEEMDVIRK 604          
BLAST of mRNA_S-dermatodea_contig11349.866.1 vs. uniprot
Match: A0A835YN99_9STRA (ABC1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN99_9STRA)

HSP 1 Score: 380 bits (975), Expect = 2.590e-125
Identity = 185/295 (62.71%), Postives = 229/295 (77.63%), Query Frame = 1
Query:   25 INPINVLPSQLLSTRVDLLSTEYIEELRQLQDDVPGFGGQRAIQIIESELGAPISELFDTFNSTSLAAASLGQVHEAWLDGKRYAVKVQRPGLKELFEVDLKSIGALASVLDRFDPKLDGASRDWGAIFRESSRVLYEEVDYMREGENAERFSENFKGTEWIKAPSINWSRSTSKVLCMEFLQGIKITDVDKIEAAGVDRSLLAKRTAECYLAQLCRHGFFHCDPHPGNAVMVFISGNLACDAVGGGRIIFYDFGMMDELSVPLKREFVNLIFGIYGNSVKEVVDSLEGMDVIRK 909
            + P  +   QL+STR+DLLS EYIEELR+LQDDVPGFG   A+ IIESELGAPI+EL+D+FN   +AAASLGQVHEAW++  RYAVK+QRPG++E+F VDL+ +  +A +LDRFDP++DG  +DWGAIFRE+SRVLYEE+DY+REG NA RF+ NFK T W+K P I W  +TSKVL MEF++GIKI+DV+KI+AAG+DR LLA+R AECYLAQL RH    C             GNLA D  GGGRIIFYD+GMMDE+ +  KR FV+L+FGIY N VK V D+LE MD+IR+
Sbjct:   97 LGPTFIKVGQLMSTRIDLLSKEYIEELRRLQDDVPGFGKAAAVAIIESELGAPITELYDSFNENHIAAASLGQVHEAWVNNTRYAVKIQRPGVQEMFAVDLRCLQTMAKLLDRFDPQMDGTKKDWGAIFRENSRVLYEEIDYIREGRNANRFANNFKDTPWLKTPGILWELTTSKVLTMEFVEGIKISDVEKIDAAGLDRKLLARRIAECYLAQLIRHVAASC-------------GNLAVDGKGGGRIIFYDYGMMDEVPLKTKRGFVDLVFGIYENDVKVVCDALEQMDIIRR 378          
BLAST of mRNA_S-dermatodea_contig11349.866.1 vs. uniprot
Match: A0A482SBS9_9ARCH (AarF/ABC1/UbiB kinase family protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SBS9_9ARCH)

HSP 1 Score: 353 bits (905), Expect = 8.030e-117
Identity = 169/295 (57.29%), Postives = 221/295 (74.92%), Query Frame = 1
Query:   25 INPINVLPSQLLSTRVDLLSTEYIEELRQLQDDVPGFGGQRAIQIIESELGAPISELFDTFNSTSLAAASLGQVHEAWLDGKRYAVKVQRPGLKELFEVDLKSIGALASVLDRFDPKLDGASRDWGAIFRESSRVLYEEVDYMREGENAERFSENFKGTEWIKAPSINWSRSTSKVLCMEFLQGIKITDVDKIEAAGVDRSLLAKRTAECYLAQLCRHGFFHCDPHPGNAVMVFISGNLACDAVGGGRIIFYDFGMMDELSVPLKREFVNLIFGIYGNSVKEVVDSLEGMDVIRK 909
            + P  +   QLLSTR+D+L  E+I++L  LQD VPGF G  A++IIE ELG PI +LFD+FN T++AAASLGQVH A ++GK  AVK+QR GLK LF++DLK+I  LA +LD+FDPK DGA RDW +I+ ES+++LY+E+DY  E  N+ RF +NFK   W+K P + ++ +T+ V+ ME++ GIK+ ++  IEAAG+DR LLAKR+AE YL QLCRHGFFHCDPHPGN         LACDAV GGR+I+YDFGMMDELS  +K   VNL+FGIY N V EV D+LE M V+++
Sbjct:   37 LGPTFIKLGQLLSTRIDVLPREFIDQLVLLQDQVPGFSGDVAVEIIEKELGKPIDQLFDSFNRTAIAAASLGQVHLATMNGKTVAVKIQRQGLKRLFDMDLKNIKVLAKILDKFDPKTDGAQRDWISIYDESAKLLYKEIDYQLEALNSIRFQDNFKNVPWVKVPDVYFNMTTTNVIVMEYVPGIKVNNIAAIEAAGIDRQLLAKRSAESYLTQLCRHGFFHCDPHPGN---------LACDAVEGGRLIYYDFGMMDELSTEVKTGLVNLVFGIYENDVMEVCDALEVMGVLKR 322          
BLAST of mRNA_S-dermatodea_contig11349.866.1 vs. uniprot
Match: A0A7S0XEN1_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEN1_9STRA)

HSP 1 Score: 343 bits (881), Expect = 1.850e-111
Identity = 164/295 (55.59%), Postives = 217/295 (73.56%), Query Frame = 1
Query:   25 INPINVLPSQLLSTRVDLLSTEYIEELRQLQDDVPGFGGQRAIQIIESELGAPISELFDTFNSTSLAAASLGQVHEAWLDGKRYAVKVQRPGLKELFEVDLKSIGALASVLDRFDPKLDGASRDWGAIFRESSRVLYEEVDYMREGENAERFSENFKGTEWIKAPSINWSRSTSKVLCMEFLQGIKITDVDKIEAAGVDRSLLAKRTAECYLAQLCRHGFFHCDPHPGNAVMVFISGNLACDAVGGGRIIFYDFGMMDELSVPLKREFVNLIFGIYGNSVKEVVDSLEGMDVIRK 909
            + P  +   QLLSTR+D+L  EYI+ L  LQD VPGF G+ A+ IIE E G PIS+++D+FN+T LAAASLGQVH A L+GK  A+K+QR GLK LF++DLK+I  LA +LD+ DPK DGASRDW +I+ ES+++LY+E+DY  E  N+ RF ENF    W+K P +  + ++ +V+ ME++ GIKI D+ KIEAAG+DR LLAKR+AE YL QLCRHGFFHCDPHPGN         +ACD V GGR+I+YDFGMMDEL + ++   VNLIF +Y N  +E  ++LE +DV++K
Sbjct:   68 LGPTFIKLGQLLSTRIDILPREYIDALELLQDKVPGFSGELAVSIIEEEFGKPISQIYDSFNTTPLAAASLGQVHLATLNGKTLAIKIQRQGLKNLFDMDLKNIKVLAVILDKLDPKTDGASRDWVSIYEESAKLLYKEIDYKLEALNSIRFKENFANNPWVKVPDVYLNLTSPRVVTMEYVPGIKINDIAKIEAAGIDRKLLAKRSAESYLTQLCRHGFFHCDPHPGN---------IACDNVEGGRLIYYDFGMMDELKLNVREGLVNLIFSVYENEPREACNALEQIDVLKK 353          
BLAST of mRNA_S-dermatodea_contig11349.866.1 vs. uniprot
Match: A0A7S2ZTQ7_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZTQ7_9RHOD)

HSP 1 Score: 333 bits (854), Expect = 4.970e-108
Identity = 157/294 (53.40%), Postives = 219/294 (74.49%), Query Frame = 1
Query:   28 NPINVLPSQLLSTRVDLLSTEYIEELRQLQDDVPGFGGQRAIQIIESELGAPISELFDTFNSTSLAAASLGQVHEAWLDGKRYAVKVQRPGLKELFEVDLKSIGALASVLDRFDPKLDGASRDWGAIFRESSRVLYEEVDYMREGENAERFSENFKGTEWIKAPSINWSRSTSKVLCMEFLQGIKITDVDKIEAAGVDRSLLAKRTAECYLAQLCRHGFFHCDPHPGNAVMVFISGNLACDAVGGGRIIFYDFGMMDELSVPLKREFVNLIFGIYGNSVKEVVDSLEGMDVIRK 909
            +P  +   QLLSTRVD+L TEY+ EL+ LQD VPGF G++A++I+E+ELG+ I  LFD F+ T +AAASLGQVH A L G++ AVKVQR GLK+LF+VDLK++  LA +LD+FDPK DGA+RDW +I+ ES+++LYEE+DY  EG NA+RF +NF   +W+K P + W R+T++VL ME+  GIKI++ +++   GV+RSLLA+R+ + YL QL RHGFFHCDPHPGN         ++ D V GGR+I+YDFGMM E+   +K   VNLIFG+Y  + K++ ++LE M ++ +
Sbjct:   23 SPTFIKLGQLLSTRVDVLPTEYVTELKVLQDKVPGFDGKKAVEIVETELGSSIENLFDAFDETPIAAASLGQVHLAVLKGEQVAVKVQRQGLKDLFDVDLKNLRVLAKLLDKFDPKTDGANRDWVSIYEESAKLLYEEIDYFAEGRNADRFRKNFDKVKWVKVPRVYWDRTTTRVLSMEYCPGIKISETEELARNGVNRSLLAERSGQSYLTQLFRHGFFHCDPHPGN---------MSVDNVDGGRLIYYDFGMMAEIKPKVKEGLVNLIFGVYEGNEKDICNALEQMGILNQ 307          
BLAST of mRNA_S-dermatodea_contig11349.866.1 vs. uniprot
Match: A0A7S4D846_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D846_HETAK)

HSP 1 Score: 338 bits (868), Expect = 7.380e-108
Identity = 159/295 (53.90%), Postives = 213/295 (72.20%), Query Frame = 1
Query:   25 INPINVLPSQLLSTRVDLLSTEYIEELRQLQDDVPGFGGQRAIQIIESELGAPISELFDTFNSTSLAAASLGQVHEAWLDGKRYAVKVQRPGLKELFEVDLKSIGALASVLDRFDPKLDGASRDWGAIFRESSRVLYEEVDYMREGENAERFSENFKGTEWIKAPSINWSRSTSKVLCMEFLQGIKITDVDKIEAAGVDRSLLAKRTAECYLAQLCRHGFFHCDPHPGNAVMVFISGNLACDAVGGGRIIFYDFGMMDELSVPLKREFVNLIFGIYGNSVKEVVDSLEGMDVIRK 909
            + P  +   QLLSTR+D+L  EYI  L  LQDDVPGFGG+ A++IIE + G P+SELFDTF+ T LAAASLGQVH A   G+ +AVKVQR GLKELF+VDL+++  LA +LD  DPK DGA RDW +I+RES+++LY E+DY  E E  ++F E+F   EW+K P + W + +S+V+ ME++ GIKI D+++I+  G+DR LLA+R+AE YL QLCR+G+FHCDPHPGN         +ACD   GGR+I+YDFGMMDE    ++   VNL+F +Y N  KE  D+LE M ++R+
Sbjct:  212 LGPTFIKLGQLLSTRIDILPKEYITVLASLQDDVPGFGGEAAVRIIEEDFGKPLSELFDTFDLTPLAAASLGQVHVATAGGRTFAVKVQRQGLKELFDVDLRNLELLARLLDLADPKFDGADRDWVSIYRESAKLLYREIDYRIEAEQGQKFKEDFAKVEWVKVPDVEWDKVSSRVITMEYVPGIKINDLEEIDRRGIDRKLLARRSAESYLTQLCRNGYFHCDPHPGN---------VACDEQYGGRLIYYDFGMMDEFQSNVRSGLVNLVFAVYENDAKEACDALEEMGILRE 497          
BLAST of mRNA_S-dermatodea_contig11349.866.1 vs. uniprot
Match: A0A7S2ZSY5_9RHOD (Hypothetical protein n=8 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZSY5_9RHOD)

HSP 1 Score: 333 bits (855), Expect = 5.160e-105
Identity = 157/295 (53.22%), Postives = 219/295 (74.24%), Query Frame = 1
Query:   25 INPINVLPSQLLSTRVDLLSTEYIEELRQLQDDVPGFGGQRAIQIIESELGAPISELFDTFNSTSLAAASLGQVHEAWLDGKRYAVKVQRPGLKELFEVDLKSIGALASVLDRFDPKLDGASRDWGAIFRESSRVLYEEVDYMREGENAERFSENFKGTEWIKAPSINWSRSTSKVLCMEFLQGIKITDVDKIEAAGVDRSLLAKRTAECYLAQLCRHGFFHCDPHPGNAVMVFISGNLACDAVGGGRIIFYDFGMMDELSVPLKREFVNLIFGIYGNSVKEVVDSLEGMDVIRK 909
            + P  +   QLLSTRVD+L TEY+ EL+ LQD VPGF G++A++I+E+ELG+ I  LFD F+ T +AAASLGQVH A L G++ AVKVQR GLK+LF+VDLK++  LA +LD+FDPK DGA+RDW +I+ ES+++LYEE+DY  EG NA+RF +NF   +W+K P + W R+T++VL ME+  GIKI++ +++   GV+RSLLA+R+ + YL QL RHGFFHCDPHPGN         ++ D V GGR+I+YDFGMM E+   +K   VNLIFG+Y  + K++ ++LE M ++ +
Sbjct:  311 LGPTFIKLGQLLSTRVDVLPTEYVTELKVLQDKVPGFDGKKAVEIVETELGSSIENLFDAFDETPIAAASLGQVHLAVLKGEQVAVKVQRQGLKDLFDVDLKNLRVLAKLLDKFDPKTDGANRDWVSIYEESAKLLYEEIDYFAEGRNADRFRKNFDKVKWVKVPRVYWDRTTTRVLSMEYCPGIKISETEELARNGVNRSLLAERSGQSYLTQLFRHGFFHCDPHPGN---------MSVDNVDGGRLIYYDFGMMAEIKPKVKEGLVNLIFGVYEGNEKDICNALEQMGILNQ 596          
BLAST of mRNA_S-dermatodea_contig11349.866.1 vs. uniprot
Match: A0A7S2TV21_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TV21_9EUKA)

HSP 1 Score: 326 bits (835), Expect = 7.040e-105
Identity = 158/296 (53.38%), Postives = 214/296 (72.30%), Query Frame = 1
Query:   25 INPINVLPSQLLSTRVDLLSTEYIEELRQLQDDVPGFGGQRAIQIIESELGAPISELFDTFNSTSLAAASLGQVHEAWLD-GKRYAVKVQRPGLKELFEVDLKSIGALASVLDRFDPKLDGASRDWGAIFRESSRVLYEEVDYMREGENAERFSENFKGTEWIKAPSINWSRSTSKVLCMEFLQGIKITDVDKIEAAGVDRSLLAKRTAECYLAQLCRHGFFHCDPHPGNAVMVFISGNLACDAVGGGRIIFYDFGMMDELSVPLKREFVNLIFGIYGNSVKEVVDSLEGMDVIRK 909
            + P  +   QLLSTR D+L  EYI+ L +LQDDVPGF G +A +I+E +   P+SELF +F+ T LAAASLGQVH A L  G+  AVK+QR GL +LF+ DL ++  LA +LD+ DPK DGASRDW  I+ ES+R+LY+E+DY  EG+NAERF+ NFK   WIK P I W+ ++ +VL ME++   KI D++KI+A G+D+ LLAKR+A+ YLAQLC+HGFFHCDPHPGN         + CDA  GGR+++YDFGMMDE +V +++  VNLIF IY N  K + ++LE M ++++
Sbjct:   42 LGPTFIKLGQLLSTRRDVLPIEYIKALERLQDDVPGFSGAKAKEILEQDFKKPVSELFRSFDETPLAAASLGQVHRAVLKTGEEVAVKIQRQGLDQLFKSDLVNLKFLAVILDKLDPKTDGASRDWVRIYEESARLLYKEIDYENEGKNAERFANNFKDVSWIKVPKIYWNTTSPRVLTMEYVPSTKINDIEKIQAQGIDQKLLAKRSADSYLAQLCKHGFFHCDPHPGN---------VGCDAKEGGRLVYYDFGMMDEFTVNVRKGLVNLIFSIYENDEKGLCNALEEMGILQE 328          
BLAST of mRNA_S-dermatodea_contig11349.866.1 vs. uniprot
Match: A0A4D9D8Z7_9STRA (ABC1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8Z7_9STRA)

HSP 1 Score: 332 bits (852), Expect = 1.700e-104
Identity = 156/295 (52.88%), Postives = 210/295 (71.19%), Query Frame = 1
Query:   25 INPINVLPSQLLSTRVDLLSTEYIEELRQLQDDVPGFGGQRAIQIIESELGAPISELFDTFNSTSLAAASLGQVHEAWLDGKRYAVKVQRPGLKELFEVDLKSIGALASVLDRFDPKLDGASRDWGAIFRESSRVLYEEVDYMREGENAERFSENFKGTEWIKAPSINWSRSTSKVLCMEFLQGIKITDVDKIEAAGVDRSLLAKRTAECYLAQLCRHGFFHCDPHPGNAVMVFISGNLACDAVGGGRIIFYDFGMMDELSVPLKREFVNLIFGIYGNSVKEVVDSLEGMDVIRK 909
            + P  +   QLLSTR+D+L  EY EEL  LQD+VPGF G+ A Q++  ELG  + E FDTF    LAAASLGQVH A   G+  A+K+QR GL+ELF++DLK++  LA +LD+FDPK DGA+RDW +I+ ES+++LY+E+DY  EG NAERF+ +FK   W+K P I W  ++ +VL ME+  GIK++D++KI+AAG+DR LLAKR+AE YL QLCRHGFFHCDPHPGN         +ACD    GR+I+YDFGMMDE    +K+  V+LIF +Y    K   D++E + ++R+
Sbjct:  310 LGPTFIKFGQLLSTRIDILPKEYTEELSYLQDNVPGFSGKIAKQVVAEELGMSVEEAFDTFQEEPLAAASLGQVHRATYQGQELAIKIQRQGLRELFDLDLKNLKVLAILLDKFDPKNDGAARDWKSIYEESAKLLYKEIDYENEGRNAERFANDFKDIPWVKVPKIYWEFTSRRVLAMEYCPGIKVSDIEKIDAAGIDRKLLAKRSAESYLFQLCRHGFFHCDPHPGN---------VACDNYMDGRLIYYDFGMMDEFRPDVKKGLVDLIFSVYEGDAKATCDAMESVGILRR 595          
BLAST of mRNA_S-dermatodea_contig11349.866.1 vs. uniprot
Match: R7QM65_CHOCR (ABC1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QM65_CHOCR)

HSP 1 Score: 332 bits (852), Expect = 5.390e-104
Identity = 161/293 (54.95%), Postives = 214/293 (73.04%), Query Frame = 1
Query:   25 INPINVLPSQLLSTRVDLLSTEYIEELRQLQDDVPGFGGQRAIQIIESELGAPISELFDTFNSTSLAAASLGQVHEAWLDGKRYAVKVQRPGLKELFEVDLKSIGALASVLDRFDPKLDGASRDWGAIFRESSRVLYEEVDYMREGENAERFSENFKGTEWIKAPSINWSRSTSKVLCMEFLQGIKITDVDKIEAAGVDRSLLAKRTAECYLAQLCRHGFFHCDPHPGNAVMVFISGNLACDAVGGGRIIFYDFGMMDELSVPLKREFVNLIFGIYGNSVKEVVDSLEGMDVI 903
            + P  +   QLLSTRVD++  EYIEEL  LQD VPGF G RA+++IE+E G PISE+FD+FN   +AAASLGQVH A L+G+  AVK+QR GLKELF+VDLK++  LA +LD+FDPK DGASR+W  I+ ES+++LYEE+DY+ EG+NA+RF  NF+ T W+K P I W  ++++VL ME++ GIKI D + IE AG+DRS LAKR+AE YL QL RHG+FH DPH          GNLA D V GGR+I+YDFGMM      +K+  V+++FGIY  + K++ D++  M V+
Sbjct:  374 LGPTFIKLGQLLSTRVDIVPREYIEELSVLQDRVPGFSGTRAVEVIETEFGRPISEVFDSFNMRPIAAASLGQVHRAVLNGEDVAVKIQRAGLKELFDVDLKNLKVLARMLDKFDPKSDGASRNWVQIYDESAKLLYEEIDYVMEGKNADRFRNNFRSTPWVKVPGIYWDLTSTRVLTMEYVPGIKINDYEAIENAGLDRSRLAKRSAESYLTQLLRHGYFHTDPH---------CGNLAVDTVAGGRLIYYDFGMMSTFEPNIKKGLVDVVFGIYEGNAKDICDAMVNMGVL 657          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11349.866.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIH0_ECTSI1.110e-16482.71ABC transporter-like n=1 Tax=Ectocarpus siliculosu... [more]
A0A835YN99_9STRA2.590e-12562.71ABC1 family-domain-containing protein n=1 Tax=Trib... [more]
A0A482SBS9_9ARCH8.030e-11757.29AarF/ABC1/UbiB kinase family protein (Fragment) n=... [more]
A0A7S0XEN1_9STRA1.850e-11155.59Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S2ZTQ7_9RHOD4.970e-10853.40Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A7S4D846_HETAK7.380e-10853.90Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2ZSY5_9RHOD5.160e-10553.22Hypothetical protein n=8 Tax=Rhodosorus marinus Ta... [more]
A0A7S2TV21_9EUKA7.040e-10553.38Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A4D9D8Z7_9STRA1.700e-10452.88ABC1 domain-containing protein n=2 Tax=Monodopsida... [more]
R7QM65_CHOCR5.390e-10454.95ABC1 domain-containing protein n=1 Tax=Chondrus cr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11349contigS-dermatodea_contig11349:177..6183 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score490.7
Seed ortholog evalue4.8e-136
Seed eggNOG ortholog2880.D7FIH0
EggNOG free text desc.regulation of tocopherol cyclase activity
EggNOG OGsCOG0661@1,KOG1235@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size909
Cds size909
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11349.866.1prot_S-dermatodea_contig11349.866.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11349 177..6183 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924198.5187125-CDS-S-dermatodea_contig11349:176..3751622924198.5187125-CDS-S-dermatodea_contig11349:176..375Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11349 177..375 -
1694079086.340183-CDS-S-dermatodea_contig11349:176..3751694079086.340183-CDS-S-dermatodea_contig11349:176..375Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11349 177..375 -
1622924198.527624-CDS-S-dermatodea_contig11349:1839..20001622924198.527624-CDS-S-dermatodea_contig11349:1839..2000Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11349 1840..2000 -
1694079086.3509424-CDS-S-dermatodea_contig11349:1839..20001694079086.3509424-CDS-S-dermatodea_contig11349:1839..2000Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11349 1840..2000 -
1622924198.5421124-CDS-S-dermatodea_contig11349:3764..39211622924198.5421124-CDS-S-dermatodea_contig11349:3764..3921Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11349 3765..3921 -
1694079086.3632517-CDS-S-dermatodea_contig11349:3764..39211694079086.3632517-CDS-S-dermatodea_contig11349:3764..3921Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11349 3765..3921 -
1622924198.552825-CDS-S-dermatodea_contig11349:5239..53881622924198.552825-CDS-S-dermatodea_contig11349:5239..5388Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11349 5240..5388 -
1694079086.3805182-CDS-S-dermatodea_contig11349:5239..53881694079086.3805182-CDS-S-dermatodea_contig11349:5239..5388Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11349 5240..5388 -
1622924198.5673072-CDS-S-dermatodea_contig11349:5940..61831622924198.5673072-CDS-S-dermatodea_contig11349:5940..6183Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11349 5941..6183 -
1694079086.3921409-CDS-S-dermatodea_contig11349:5940..61831694079086.3921409-CDS-S-dermatodea_contig11349:5940..6183Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11349 5941..6183 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11349.866.1

>prot_S-dermatodea_contig11349.866.1 ID=prot_S-dermatodea_contig11349.866.1|Name=mRNA_S-dermatodea_contig11349.866.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=303bp
MNQPINQPINPINVLPSQLLSTRVDLLSTEYIEELRQLQDDVPGFGGQRA
IQIIESELGAPISELFDTFNSTSLAAASLGQVHEAWLDGKRYAVKVQRPG
LKELFEVDLKSIGALASVLDRFDPKLDGASRDWGAIFRESSRVLYEEVDY
MREGENAERFSENFKGTEWIKAPSINWSRSTSKVLCMEFLQGIKITDVDK
IEAAGVDRSLLAKRTAECYLAQLCRHGFFHCDPHPGNAVMVFISGNLACD
AVGGGRIIFYDFGMMDELSVPLKREFVNLIFGIYGNSVKEVVDSLEGMDV
IRK
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mRNA from alignment at S-dermatodea_contig11349:177..6183-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11349.866.1 ID=mRNA_S-dermatodea_contig11349.866.1|Name=mRNA_S-dermatodea_contig11349.866.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6007bp|location=Sequence derived from alignment at S-dermatodea_contig11349:177..6183- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAATCAACCAATCAATCAACCAATCAATCCAATCAATGTCTTGCCTTC GCAGCTGCTGTCGACGCGAGTGGACCTGCTGTCGACGGAGTACATCGAAG AGCTGCGCCAGCTGCAGGACGACGTGCCGGGCTTTGGGGGGCAACGGGCG ATCCAGATAATCGAAAGCGAGCTGGGGGCTCCGATATCGGAGCTGTTCGA CACCTTCAACTCCACCTCGCTGGCGGCCGCTAGCTTGGGGCAGGTGAGTC GAGTGTGTCGAGTGTGTCGAAGTGTCGAGTGTGTGTATTTGGGTGATCAC CTCAACTCACGGTGGCGATCAGCGTAGCTAGCTTTTCATGTTATTTTTTT GCACACATACTAATACTATTATTAAGGCTAATATTTGTATGATATACCGG CTCATCCGAGGTCCGTATGTGGTCACAAGGGATTGATTGATCATCTCATC TCTCTTATCTTATCCCCGGTATGTTCCCACCTCGGGTTTTTACCTCGGGT TTTGATCGCGAATGCATTAGGTTCGGCACTCCCACAGCTCGCCGTTTTCT CGGATGTTGCTTACTCACGCTCTCGCGCTTTCTGCAGCGGGGGACATTGT ACTTTAGATAAGAATATTACTCCAATACAAATCAGTCTGATCTGGCTTTA CGACATGTATCTGCACTCTTCCGTCCTGGAATGTCACTCAAAAACTATAC AATTAATATCAAAGAATACTATTAATATGCCATTATTGCAAGGTGTATGG GCGGAATTATCATGATATTGTATTGTATTGTGATGGCATTGCCAGGTGCA CGAGGCGTGGTTGGACGGAAAACGCTACGCCGTGAAGGTCCAAAGGCCAG GCCTGAAGGAGCTTTTCGAAGTCGACCTCAAGAGCATCGGTGCCTTGGCC AGCGTGCTCGACAGATTCGACCCGAAGCTCGACGGAGCATCAAGGTGAAG GACGAGCGGGGCAATCGCTACCGGTTGGCTAGTGCTTTGCCCCCATTTGC TGTTTTGGAGTTGTTGTGTTGCTTTTGCGCTTGTTGCTTTTTGGTCTTTG TTGATTTGATACTGTAGCGCTTGGGACGTTTAGTAGGGACATAGAGTAGG CTCTTGAGTTTTTTTGTTAAATAGGGCTAATTGCGTAGAGCTCTAGGGGG TTTGAAGCTTGAAGGCTGTGGTCTTGGTTTTGCGCCTTTGCTGCTTCTGG TTTTTATTGATTAGTAATAGCGCTTTGCTGTTTTTAGTAGGATTATAGAA GAGGCTCTTGTTTTTATTGTATATTACTATTATAATTGCGTTGGGGTTTC GAAGCTTGCGGGCCTTTATTCCCTTTCTATTTTATCATGTGCCGTACAGT CACCGCTTCCTACCAACGCACGCCTCACGGGCGTAACTGTGGCTATCATA CCTATTATATGTACTGCACTACATACTACTTTACGGCCGTATAAATACAA GAGTTAGCGTATGAAGAGCTTATGATTCCAAGGATGTTTGCATTTCCCCT ATACACGTATCATACATCCGGAAGGGTTTCCAACATGCGCGGCCGAACCT GATCGATCACAACACCGACGGCATCCAGCGAGTGCTACTTTGCAGTACAT CGTGATGTGTCTTGGTTTGAGCCTGTTCTTTTGAGGCAAGTCCTGGTATC ATGGTGAATTGTGGGTGCATGTTTTACCGCAGCGATCCGGTACACGCCAT TTTGTCGTACAAGTATCATAATATTTGAAGTATCAGACAGCAGTGTGATG CAATAGCTGGATCAACGTGTGATGATGGTGACGATGATGGTGATGATGAT GGTGATGATGGTGGTGATAATGATGGTGATGGTGATGATGATGATGATGG TGATGATGGTGATGGTGAGGGGCCGTGTGCCGCAACATCCACACAGTCCT TGCATACAGTAGAGTACGTGCGAAATGCCTGCTACTCAGACTCGATGTCT CGTCTAAGATTATGATGCTTCCCCGATGCCATCTCGGCTGCTGTATTTTC ACTGGTTGAGTATTGATGCTGAAGATATCGATCTGACACCGCTGTCTCTG ATTAGCCTATTCTACCTCTTGTCTGGGACATGTGGCCGTTTCATTGGTTG ATTCTGGCCCTTGAAGGGATCGATTTGACCTCGCTGTGTCTGATTGGCGT ATTCTGCCTCTTGGGTGTGTGGCCCATTGATTATTATTTTTCCATGGCTG TTGCAGAGATCGATTTGACAATGCCGTCTCTGATTGGCCTATTCTGGTTG TGTGATTTGCAGGGATTGGGGGGCGATCTTCCGCGAGAGCAGCCGGGTGC TGTACGAGGAGGTAGACTACATGAGGGAGGGGGAGAACGCGGAGAGATTC TCGGAGAACTTTAAGGGGACCGAGTGGATCAAGGCTCCCAGCATCAACTG GTCGCGAAGCACGAGCAAGGTGAATTGGTGACACTATTACTTGTATTAAA GGGCATGTTATGTTACTGTAATACGTGTACTGTAATATTAATAGTATAAC AATAGAAGGTGCCTGCGCGCGCCGTCGGGATGTTGTATTACTGGTTTGTC CATTTGTTTATATGATGGGGCTCTAGATATTTTGTGCTTTTATTGTGTCC AGCTGTCTTTTAGGATATTGTATTTATCGTGTGTTCTGTCATTGTAGGAT GTTGTGTTTGTAAGTAGCGTGTCCCATTTTAATAGGATATTGTATTATTT ATGGCAATGTGCCTCATTGTCAATTGGATACTGTATCATGAGTGCGCCCT GTTCGGATATTGTACAGTATAATGTATAATATCAACTGTGTTTCATACCC CTTTAGGATGTTTTACAACATATCATACGACAGCGGCAGTTAATATTAAT ATTAATAGTATTTTTTACCGTTACATTATTGGAATGTCTCCCCATACCCA AATAGTAGCACATGTGCACAATCACTGGTGGGATACCCCCCGAGAATGCA TGTTGACGGGCTGTACACATACGCGGGGATTTAGGATGACTCACAATTTG GAGATGGTGTTTTTATTGTCGCGCCATGTGTACACACTAGTCCACCTGTA CACGTGTAGTCCCCCCCTGCATGTATGCCTTACTTACTGAGAGAGTAAAG GACGTACCTGCGTGCCTGTGAGTTGGGGATGTACAGGTGAAGTAGATTAT GTTTTTTTGTAAATAGCGTTTCCTGTTTGGACGTTGATTGATTGCATGAT CGCCGTGTGTATTGTATATAGTACTGTATTTATTGTGTAGACATATTCGG CGGGATTGATCTTCCGTGTGTACCTTCTGTACCCTCTGTCTTATTACTGT ACCTCCTGTACCTCTTTTGCGACCACTGCAATAGCGGGATATGAGTGGAG AGGCCGATCGGATGCATGTTCCGTGAGGTGTGCGTTAGCACAAGTTACTT GTGCATTACATGATATTTGGCATAACTAAATGTAGAGAAAATTAATTTGG CTTCAAAGGTGAACTAACTCTAAATACTCTAAATAAATCGCTACTACGGA GGTACAAATAAACAGTATTATAATTTAATACAGTAGTACTGTACAGTAAA GTAATCTTAATAGGTCCAAATGTGCCCAAACGTACATCCAATCCAACATT GATAAACCAATGTACCATAATACGAACTATGAATATAATTTGTAATAAGT CTGATCTGGCTTTACATCTACAGACAGTATCTCAGCATAATGTCACTAAA TTTTTTTTGTTTTCCGGCCAACGTTTAAATGCCAGACTTGACTACGCTAT TGAGAGCTTTTGAGCACAAACTTGGTCTTGATTTTACGAGTATTACACAT TCAGTAATGAGGAAATCCACACAGTTACGTAAATAGTCAGGACTAAATAT CCCAGAGAGTGTGCTATTTTAGTAGCCTTGCAACATCTGCAATCTACAAA AAAGTAAAATATGTATTACTACTATACTGACTACTACCTGGTATAATATA ATACTGCTTGCTATTACACTGATTGCTAATATTTTGACTACTATTATACT GATTACTACAGTAATATAGTGATTACTACTGTACAGTAATATAGTGATTA CTATGTGTGTACCTCCGTATTATAACAAAATCGTTCAAAGCGCCAAAGCG GTATTTATTAACAAAGATAACTACTGGTGTTATATAAATATAACCACGCT ATCAAATCACTCTCGTTTAACCCGCCGGCGCAGGTGTTGTGCATGGAGTT TTTGCAGGGCATCAAGATAACGGACGTTGACAAGATCGAGGCGGCGGGGG TGGACCGATCGTTGCTGGCCAAGCGAACAGCGGAGTGCTACTTGGCGCAG CTGTGCCGACACGGCTTCTTCCACTGCGACCCGCACCCAGGCAAGTTTTT TTATTGATTGGTGGCTTTGTTTGATTGATGGATTGATTGATTGATTTGAT TTGACTTGATTTGATGAATTTATTGATTGATTGATTGATTGATTGATTGA TCAATTGATTGATTGATTGATTGATCGATTGATTGATTGATTGATTGATT GGATTTAGTGATTGCTTGATTTCATGGATTTATTGACTTGATTGATAAAG TGATGATCACACTTACAACCATAATACAGTAGTGATGATCACACTTACAA CCATAATACAGTAGTGATGATCACACTTACAACCATAATAGTGATGGTTA TGGTTGCCGATCCCGCTTGCTCGTGGTCAGATGAGAAATCGAAAGATAAA AAAAACCCTACGGAAGGACCTATATAGTACATATTATACAAAGAAGGATT TGACACAAAACAAACTCTATTAATAGGAAACAAAGAGGACATACTTCGGA GTCCAACCTGGGATTGCCTGCTAAAAATAAAAGAGAAAGACTACTCGTAA TCGCCCCCATCTCCTTAAGGAAGGGCTCAGCCCACCCGCGATGTCCTTAT CGAGTCTGGCCACCGCAACATACTTGTACATTTGAAACGATTATACTGTG TTCGTCTTACTAAAACTTGGCCCGCTTGTGGTGTGTTGTACGCGTCCGCG CTACAGTATCTAATAGGAATAGCTAAATCTGCGTACTTTTTGATGCGGTA GTGGAGGTCGAGGGCAGGGTTAGGGTGTGCGATATTGGGTGCGCAATCTT GGGCATATACATTTGCGCGCTTACATGGTTTGTCGAATTGGATTGTTCAT GGCTCGTTGTATTTGTGTAGGGTAGGTCAAATGTGCTCTGTTCATAGAGG TCAATGTCAATGTCATGCTTGCCGTGCGCTGTATTTGTGCACGCTTTGAT GACCTCAATCTGCGCACTTGCACACTGTGGGAGTAATTACCAAGTATGTG GCATTCTCAAGGTAAACCGTATTTGGTACGCTCTCATGGATAAATCTGCG CGCTTGCATCGTCGCCTGTGGCACACCTGTGGTGCGTCATGTTTGTGTAC TTGTTACGTGGACAACACTAATGCAACTAGTGCGCCGTGATATCTTGATC AATTGTTATGCTTTGCACGTTTTTTTAGAGTTGTTGAGCCTTGATGCCAA ATTTGCTGATGCAAAACGTATGAAATAACTCCTACAAGTATCGTATTTAA CACCTACACACTTTGTATATTAGGGATTTTAGAGTAGTCCTTTACAAAGT AGTGGCCTCATTTTCCAAACCCACAATATATCGTCCTGCCAACGCACACC TCACAGCCGTTGCCGTGGCTAGCTACTGTTACTGTACAACCTTGGTACAG TATAGTATAATAGTGCCAAAAGGGTTGAGACGAGTCTCTCTCAAGCAGTC TTTACGCACTTTCCGCCAGGCGACATTCATTACTATTAATATTACTAGCT GATGAAAGCGCCGTCATGGTTTTCATTTCAGGAAACCTGGCGTGCGACGC TGTGGGCGGCGGGCGCATAATTTTCTACGACTTTGGGATGATGGACGAGC TGAGCGTTCCCCTGAAGCGCGAGTTTGTGAATTTGATCTTCGGCATATAT GGCAACAGCGTCAAGGAGGTGGTGGACTCTCTCGAGGGGATGGACGTTAT CCGCAAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig11349:177..6183-

>mRNA_S-dermatodea_contig11349.866.1 ID=mRNA_S-dermatodea_contig11349.866.1|Name=mRNA_S-dermatodea_contig11349.866.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1818bp|location=Sequence derived from alignment at S-dermatodea_contig11349:177..6183- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAATCAACCAATCAATCAACCAATCAATCCAATCAATGTCTTGCCTTC
GCAGCTGCTGTCGACGCGAGTGGACCTGCTGTCGACGGAGTACATCGAAG
AGCTGCGCCAGCTGCAGGACGACGTGCCGGGCTTTGGGGGGCAACGGGCG
ATCCAGATAATCGAAAGCGAGCTGGGGGCTCCGATATCGGAGCTGTTCGA
CACCTTCAACTCCACCTCGCTGGCGGCCGCTAGCTTGGGGCAGATGAATC
AACCAATCAATCAACCAATCAATCCAATCAATGTCTTGCCTTCGCAGCTG
CTGTCGACGCGAGTGGACCTGCTGTCGACGGAGTACATCGAAGAGCTGCG
CCAGCTGCAGGACGACGTGCCGGGCTTTGGGGGGCAACGGGCGATCCAGA
TAATCGAAAGCGAGCTGGGGGCTCCGATATCGGAGCTGTTCGACACCTTC
AACTCCACCTCGCTGGCGGCCGCTAGCTTGGGGCAGGTGCACGAGGCGTG
GTTGGACGGAAAACGCTACGCCGTGAAGGTCCAAAGGCCAGGCCTGAAGG
AGCTTTTCGAAGTCGACCTCAAGAGCATCGGTGCCTTGGCCAGCGTGCTC
GACAGATTCGACCCGAAGCTCGACGGAGCATCAAGGTGCACGAGGCGTGG
TTGGACGGAAAACGCTACGCCGTGAAGGTCCAAAGGCCAGGCCTGAAGGA
GCTTTTCGAAGTCGACCTCAAGAGCATCGGTGCCTTGGCCAGCGTGCTCG
ACAGATTCGACCCGAAGCTCGACGGAGCATCAAGGGATTGGGGGGCGATC
TTCCGCGAGAGCAGCCGGGTGCTGTACGAGGAGGTAGACTACATGAGGGA
GGGGGAGAACGCGGAGAGATTCTCGGAGAACTTTAAGGGGACCGAGTGGA
TCAAGGCTCCCAGCATCAACTGGTCGCGAAGCACGAGCAAGGGATTGGGG
GGCGATCTTCCGCGAGAGCAGCCGGGTGCTGTACGAGGAGGTAGACTACA
TGAGGGAGGGGGAGAACGCGGAGAGATTCTCGGAGAACTTTAAGGGGACC
GAGTGGATCAAGGCTCCCAGCATCAACTGGTCGCGAAGCACGAGCAAGGT
GTTGTGCATGGAGTTTTTGCAGGGCATCAAGATAACGGACGTTGACAAGA
TCGAGGCGGCGGGGGTGGACCGATCGTTGCTGGCCAAGCGAACAGCGGAG
TGCTACTTGGCGCAGCTGTGCCGACACGGCTTCTTCCACTGCGACCCGCA
CCCAGGCAAGTGTTGTGCATGGAGTTTTTGCAGGGCATCAAGATAACGGA
CGTTGACAAGATCGAGGCGGCGGGGGTGGACCGATCGTTGCTGGCCAAGC
GAACAGCGGAGTGCTACTTGGCGCAGCTGTGCCGACACGGCTTCTTCCAC
TGCGACCCGCACCCAGGCAACGCCGTCATGGTTTTCATTTCAGGAAACCT
GGCGTGCGACGCTGTGGGCGGCGGGCGCATAATTTTCTACGACTTTGGGA
TGATGGACGAGCTGAGCGTTCCCCTGAAGCGCGAGTTTGTGAATTTGATC
TTCGGCATATATGGCAACAGCGTCAAGGAGGTGGTGGACTCTCTCGAGGG
GATGGACGTTATCCGCAAGCGCCGTCATGGTTTTCATTTCAGGAAACCTG
GCGTGCGACGCTGTGGGCGGCGGGCGCATAATTTTCTACGACTTTGGGAT
GATGGACGAGCTGAGCGTTCCCCTGAAGCGCGAGTTTGTGAATTTGATCT
TCGGCATATATGGCAACAGCGTCAAGGAGGTGGTGGACTCTCTCGAGGGG
ATGGACGTTATCCGCAAG
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