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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Model size | 1562 |
| Cds size | 819 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1134.865.1 >prot_S-dermatodea_contig1134.865.1 ID=prot_S-dermatodea_contig1134.865.1|Name=mRNA_S-dermatodea_contig1134.865.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=273bp
MPGTGCPSQRDEGNGRNDSSRTSGRDGGGRRRGRPHRLKLTQKWGGGGGG
RVADGIPRYVDGCDQTRGLEEKVMTFLTSFERFFCIVDVDGFNVGGTVSM
ICHDVDRLMHACEYNEIRTCYCPAGVFPGGSRTTFLGRMFLALTMRRSYF
GTVRSIVTCVASSSERGMKLGRSGGSSKPGSAKMARITVLLVYETTRCES
STSSKTSPFQKVFELTTIHFPSRSVANSVIYVVHGYLSLHAEDNVCFCLL
HVRTWEHVISAISRAENSQRAS* back to topmRNA from alignment at S-dermatodea_contig1134:11561..18789+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig1134.865.1 ID=mRNA_S-dermatodea_contig1134.865.1|Name=mRNA_S-dermatodea_contig1134.865.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7229bp|location=Sequence derived from alignment at S-dermatodea_contig1134:11561..18789+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GACGACGCCGGGGACGGTGACGCTTTGATCACATCGCGTTTTGCAGGCGC
CCAAAGAGATGTCTCCACAACCTCTAGCCATGGGCGCCGCCATATCCGCG
CGTCTTGTGCCTCTGTCCTTGAGGACCGGCGCAAGATTGCAACATTGGAG
CAAGAAAAACAAGAGGCGGTAGTCGAGGTGTGTGGAAAACGACTGTTGAT
GGGCGGGGAGTATGTCAAGTTGACGATGTGCTAGGGTTGGGTACTGGACC
AGTTCGTACTGGCAGTGTGCTGGTACTGGTTAATACCTAAGAGCTGGCCG
AGGGGTCTGCCAGTACCAGTATATACACTAAAACATACAATATACTACAT
TACACGTCAGTACTTATTGGAAACCCATCAAATTGCCCGGGGGCGCGTTG
AGAGAGGGAGAGAGTGCACACACACGCACACACGTTTAGGAAACAACTTC
TCAATGTTTGTGCCGACATGATTCCGGAGCTAGTCGGCACCGCACCTTTG
TCTGACGTGTACCATATGGATTGTTGGGTTCGTATTTAGCGTTTGTCCCC
GAGTTACTGCCTCCACACATGGTCTAAAATAACTCAATAAGTATCGTCTA
ATGAAGCCAAATCACGTCAAAACGCGCCTCCAGCGGGCCACTCCGGGGGC
GCCTCCTGCGGGGTGCGGCTTCGCCGCGACCGTTTTACTGGTAAGATATT
GTACACTTGCTGCTGACGAAGCCAGTACTTCAGAAACTGGCTGGCTGCGC
CGCTACCCAATCCTATGTTGTCGTGCATCTCTTGGCTATAGAAATACCAG
TTACGGTACTCGACATTGTAGAAGTAGACATATTATCAGTTATTTTCTCC
TAGACGGCTTGCACATCTGACCTCGAGTCGGGTCGGATGAAGCCAATCGG
CTATACGTGGGAAAATCAATCAATCAGGCGATCATATCAATACATGGACG
GGAAAAGCTGGCGCTTACCCAAACAACCCAGGTCGTTATTCTAGCTGGGG
AATACAAGGATCTGTGGCACACGTAGTGGCCTCGGCCTGTGCAGTTCACG
CCACGATCGATCGTCGACTAACGCAGAAACATGTTGTGGTCAGCCATGGG
TCGTTTTGGGTATTATATCTACTTGTTTTATCCCATGCTCGTCTCCACCA
GGGCTCTCCCACCGGTGGTTTGTGACTGCGCTAGCTGCAAAGTGCTCTTT
GCGACAATCGACTCGATTGCCATAAGATTCAGATTCCCCGCGAGCGCTAC
CCTGATCGTGAGCGGTATGTGTTGTCGCAGAGTAGGCGATGATCGGGTGT
AAGGCACACAGGTTGAAGACACTACACCACACGTTGTGTTCCACTCTACA
TTTACTGATCAGGCAAGGGAAACGTACAATTTCAACGATTTTTGCATACA
AATCAATACATAGTCTACGGCATAAATTGACGCGCTTCGATTCCTAGTCT
TCCCATCGCTGGGAAATGTTCAATACATCGCCAGGTTAGCGCCGTAGTTG
CTGATATATTTTGTCGTGCTTCACTTCGTTTAAGGTGAAAAATCTTCGGG
ACGAGGTGGAGGAGCTCAAGAACCAGGTGGCCGATGCCGCGGTCGACAGG
GCCCATGCGGTGGATGAAGCAGCAGGAAAAATCGAAGAAAAATACACCGA
AATTTTTCAGGTGTGCGTACATTCACGACACTACAGACGATGCCTACTTC
TGACCCTTGTATTTCACGGTTTCGTTATATAGGCAGGCACGTTGTCGCCT
TCAACTCTTGAGCGGACGATGACTGCTTTCCCAACGCATGTTATTTTCCC
TCCGATATTTGCTGCTTGTTGACCGGGTCAGCGCAGGCCCTCCGCGAAGA
GCTCGGCGCAGCATCAACGGTTTCGAAGGACAGCAAAGGCGCCATTGAGG
CCGTGTGCGAGGAATGGCAAGCGGTTCGGCAGCAGGTGCGGAACGCCATT
TTTTTGGGTACCATTGATATTGCTTTGATGAATATCCTTTTACCGTTCCT
CTGTCGCGCGCGTGTGGCAGGAAGAGCGCTGTTCTGATTCCGCGAGGAAT
CGCCCGTCGTGCTGCGGTGGTAGTTGTTTTTCGCTGCTTTCGTTGTTCAG
CTTTGTGCGTCGCGGGCAACATGTGTCCCTTGTGCTTTGATCCTGGGCCG
GTAGGTCATCTTTTCGAGCGAGGGTCGGAAGGTTGCCGAAGCTTCGGGTG
TTCCCACGTGGGATGATTGTCCGCGTCATGGCCGGTTTAACGCGTCAAAC
GGCTCACTACGATGCGAGATAAACTTGGTGATACATCTTTGTGTGATAGC
GCGTGCGGGTTCAACGTGAGGCTTTTTTTACGCGCAGAAAGTTTCAGTTC
AGCAAAAGCTGTCTAGATATTGACTGCTTGCAGCTAGTAATGCTGCTCAT
CTGAGTCATGCCCAGCCCAACAAAAACTATGGGATATACCTCTGCGTTAA
AGTGCGTGTGGCCGTATTGTCGATACAGGGGTAGTTCTATTTCAGCTTTG
CTGCGCTTGCATTATGTGGTGTCCACACATACACGTGTTACTTGCTCTGC
TTCCACATTGTGTTTGGTTTATCCTGATTGCGGCCCTCAAGGGACGCGTG
ATATATGATGGCGTTTGTCCTTTCGCCGTCTACCCGATAATGGCACTATC
CACCAGATTGAGGCAATTGTAACGAATGGTTTCCCAGTATTCCCCTTCCC
GGGTGAGTACGGCTTTTGTTATCGAGTGTGTTGGTTTTGGCCCCGAACTT
CCTCTAGCATTGATTGTGCTATCACGGCTGGTGTATGTGACCAGTCAACT
CACTAACATGATTGTCCATGACTGCTGTAGAGACGACTACGGTGCGAGCT
TCTTTCGGCCAAGCAACTTGCCGTGATACCCAATTGAGATGGGGCATTCG
ATCCTCCTTTTGGAATTTGTTTGTTTTCTTCCTTGGACACTTCGTTTTAC
TCGATAAAATGTTGCGAAGATCCAGATGAAGGTAGCCGCTGCCGCTAGAA
AGATCAAGGCAGAGGCGGCCAAGACGGAAAAGGTCAAAGAAGAGTTTCAG
CAACATATGAAGGTAAGACAGTGCCGTCGGACATGCTTTGATGTAGGATT
CCGTGATATCTTTATTTTGCCTTGAATGACCGAACTACATACCCAGGAAC
CATCGGGTCGAGGGGGTAGATGCCACGTTCAGGCGCAATGCTGTGCCTCC
TCTCTTCTGCCTGACCCTACACCCTTTGTCACTTGTCTTCATATACGTCT
TTGTACATTTTTCCGTTCCAGTCGTAGCAGCATCGGCCGTACTGAAGTAT
TGTGAGGATTATAGCGATTCCGATTGTTGTCCGATTTTTCCCGTTTGCGT
TTTTTTCTGTTCCGTTTATCACGCAGTCTTGATACGCAGGAGTAAACATA
TACTATTGTTCAGTTCTTCCGTGAGTACGTGTGTAGCGGACCACGCATAT
CACGACGATCTGGTATGACTTAGCCAATCAACTACAAGTAGTGTGAAAGT
CATCCCCATTCCCCCCAAGGTCGCTCGTGCCGGTGCTCGAAGTGACGCTC
GTGTAATGTCCGGGCTGTACTTGTTGCCCGCCGTCCTAGCGTCCATTTTT
GTTTTGTAATTGTGCTGCCACTAAAATTCTGTCGACAAATTATAACGCAG
GCATTGCATGCAGAGCTTACCGCGACGTCGAAGGGTTGGGGGAACACCAA
GGGCGACCTTAAACCGATATGCCAGGAACGGGATGCCCTTCACAAAGAGG
TACACGGGATGTTTTGGAAGTGTGCCGTAAGTGTTGGGTGTGCTCTCAGC
AGAGCTTGTGCTAGGTATGTTCGGAGGGGGCAACTCCTCTACTGAAAACT
TGGGTGGTAGTGTCTGAGCGTCGGCTACGGTTGAATCATTTGCTTTTTGC
TGCCTGGCTCATTACCAGCTCAACGTCTTCGTGGTCGTGCCGGGGTACGC
TGTCTCGCTTGGGATATTAGGTAGCGTGTGTGTCTCAGGCGAGAACCTGC
CAAACAGCCCCAATAATTTGTTTTCCTATTCGGGCATAACTTGGCCAAGA
GAGCGCTCGGAAGTCGTTTCCTTGCTGATAAACACACTTCTAATTTCTTT
GGTTTTGTCCCCTCCCTCCCGTTTTCGTTAACATCTGCATTTGAGGCTTG
AGAGGCGTCCAAATTTTTTTTTTTTTTTATCTTTGCACGCAGATGCGCTT
ATGGTGTGTGCACGTGCACACAGGCGTTTCGTACATTGGTTTACCGTCTC
CCGCAATCACCAGGTCTTTCGTTGAGCTCCTGGGATCAGCAGCGACTGCG
GTATCTTCGCCACAAACCCCCTCATGAAACCCTCACTATATGTCTTATCA
TAGGTCCAAGGGGCTATGTAGCACCTGACAGTTCCGCCGAATCTCCCCAC
GCGCTGAAAATATAATACTGTACTAGCACACTACTTATCATGGTGTAGCC
AGTCTAGCAGCCGCAGCGTGTTGATCACAGCACACGTAACCATAGCGCAC
AGCAGTTGTCTAGCAGTGTCACGGCGTTTTGATAACATCACACGTCGTTT
CTCCCAGGGAGCTCGTGTCTGGGATGTGCGCACATTAAAAAAAAAAAAAA
AATGAGTTAACTCTTTACTTTATCATACAATCGTACGTGTGTACAGAGAT
TCACAATTTTAATTGAAAATAGAAAGTATGCTCTACGCTGGTCCAGGTCT
ATGCAGAATTTCACACAGCAGTCCGGCCGATTCCCCCCCTGCGTTGATAA
CAACACATCGGGTCATAGTGCAACAGCCTCAGCGGATTGATAATATAAGC
ACAACTGCAGTAGTTGGTCAGCAGTGTCAGGGCGTTGATCACAGCACACC
TCGTGTTTCACCACGTGTACAAGTATTGAATGTCCGTGCGTACGTCACAA
CAACAAAAATATTCCGAATCTTTCATTCAAAGCGGCGCAATTGAAGTGCG
TATCCCATTTATCCCGATCCTGGACCCGTATTTCTGATCTCACGAGTTCG
ATTCCCTTCGCCGTGGCATTTTTTTATCGTTTTTTACATGTTTTTTTTTT
TAGGCCTTTTACTAATTTATTTCGACAGTACTACTGTAATGTTATTTTTT
TTGGGAAGTGGCGTCCACTCTGTTTTTCATGTGTTTACTTTGCGACTTGA
GTGTTGTCAGCTGTTGGCTTCCGTTGAGTAGCTGCGCATATTCTCCAGCT
ATTGTTTTGCTCTATATAATACATAATAGGTTGCTTTTATAATTAATATT
ATAAAATATAATTATCCTGTCCTGTGGAAATAACATGTATCCATCGCCCT
CCTTGCCGATGTTTCCTTGCAACACCCTTCACCCTTTAGCTTTCCCACGT
CCCGAAGGGAAACCTTGTATGTAGTTATGTTTTTCGACGCGTTTTTCTTC
CTCCACGCAATATGTGATCACAGTGTGTGTTCACAAACGATGCATATCGA
ATCCCGCAGATCGTAACTAACGATCCGTTTTTGGGCGTAGCGTGCGATTG
TGTACCCCAAAAAGAAAATCCCGATTCCGCCGTGGGGTTCAAAACCATTG
GTGCGTTATATTGATCGTGTCTTGTTATCGTACGATATACGCAGGGCCCA
CACAATGTGCTGCTCAATAGATTCACTACGTACCTATTCCTAGCCTGGTC
CGGCGAAAACCCGGCGTGCTCCGTCCCGGCTTTGTAGGGATGCGAGGTCT
ATGGTCTAACGACTACGGCATGCACGATCAATGAGTACACGATCAATGAA
TGAGTACGTACCTATCCCTACAACGGCACTCTGCCTTCCCGGTTGAAATT
AAGCTCGGGGCACAGGTGGTTTTTGACGAGGACATTGCCTCCAAGGTAGC
GCCAATATCGAAGGCCTTAGGGCATCGGGTGACGAGTGTCAAGGGTTGAC
CCGGTACAGCGGTTCAGTCACTTTCTTGGTACGCGATGTTTAGGTGTATT
TTTGGTACGTGATTTAGAACTTCTTTCTTGTGCTGTTGGAATGGCAACAA
CTTCCTCAAATGCAACCAAGCATAGAACACATAGCAAGGGTTGATGCTCC
CTAAGATCAACGCCTTGTAGCCGGCCAGCAGGTTGATCCAAGCGCGAAGA
CGTCAAAACGTATGCGGGGAGATGTGATGCAATCACGTAGGACAGCTATC
CGTTTCTTTATCCCACATCTATCGCAGAATGGCTGAAAATAGCTCTGACA
TGAGCTGACGTTACAAACTCACGTTTATGCCGCCCGTCGATTACGCCTCC
CTGAGGCCCAGACGAGGGAAATGGTAGAAACGATAGCTCCAGAACCAGTG
GACGTGATGGTGGAGGAAGGAGACGCGGACGACCACATCGGCTTAAGCTA
ACTCAAAAATGGGGGGGCGGGGGAGGAGGCCGTGTCGCCGATGGTATCCC
TAGATATGTCGATGGTTGCGATCAAACCCGAGGGTTAGAAGAGAAGGTGA
TGACGTTTCTGACCTCTTTCGAGCGTTTTTTTTGCATTGTTGATGTAGAC
GGCTTTAATGTTGGCGGGACCGTATCGATGATATGCCACGATGTCGATCG
TCTAATGCACGCGTGCGAATACAACGAGATTCGTACATGTTATTGTCCGG
CGGGAGTATTTCCGGGTGGCAGTCGAACAACGTTTTTGGGGCGTATGTTT
CTCGCGTTAACGATGCGACGATCGTATTTCGGGACGGTTCGGTCGATTGT
TACTTGTGTAGCAAGTTCTAGCGAGAGGGGAATGAAGTTGGGGAGGTCGG
GGGGCTCCAGCAAACCTGGAAGCGCAAAAATGGCGAGGATTACAGTCCTG
CTGGTGTATGAAACGACCCGCTGTGAATCTTCCACGTCCAGCAAAACATC
CCCCTTCCAGAAGGTCTTCGAGTTGACAACGATACATTTCCCCTCAAGAT
CCGTCGCGAATTCTGTCATATACGTAGTACACGGGTACCTCTCTCTACAT
GCGGAAGACAACGTTTGCTTTTGTCTGCTGCATGTACGTACTTGGGAACA
TGTGATTTCTGCAATCAGTCGAGCAGAAAATTCTCAAAGAGCTTCTTGAG
AGCTGGCTTGTTGGCCCATATATCCTGCTGTGGCGAATTGATATAGTTTT
CTGTATTTGAACTCGAAGATCAAACTCAGGCTGCATGAGGAATGTGTCGT
TCCCGCGATACGAGGTATGGCAATGCTGGGAACCCTTTGATGGGGAAACC
GCGTCAGCCACGGAAACCAGTGCACGGCC back to topCoding sequence (CDS) from alignment at S-dermatodea_contig1134:11561..18789+ >mRNA_S-dermatodea_contig1134.865.1 ID=mRNA_S-dermatodea_contig1134.865.1|Name=mRNA_S-dermatodea_contig1134.865.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1638bp|location=Sequence derived from alignment at S-dermatodea_contig1134:11561..18789+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCCAGGAACGGGATGCCCTTCACAAAGAGATGCCAGGAACGGGATGCC
CTTCACAAAGAGACGAGGGAAATGGTAGAAACGATAGCTCCAGAACCAGT
GGACGTGATGGTGGAGGAAGGAGACGCGGACGACCACATCGGCTTAAGCT
AACTCAAAAATGGGGGGGCGGGGGAGGAGGCCGTGTCGCCGATGGTATCC
CTAGATATGTCGATGGTTGCGATCAAACCCGAGGGTTAGAAGAGAAGGTG
ATGACGTTTCTGACCTCTTTCGAGCGTTTTTTTTGCATTGTTGATGTAGA
CGGCTTTAATGTTGGCGGGACCGTATCGATGATATGCCACGATGTCGATC
GTCTAATGCACGCGTGCGAATACAACGAGATTCGTACATGTTATTGTCCG
GCGGGAGTATTTCCGGGTGGCAGTCGAACAACGTTTTTGGGGCGTATGTT
TCTCGCGTTAACGATGCGACGATCGTATTTCGGGACGGTTCGGTCGATTG
TTACTTGTGTAGCAAGTTCTAGCGAGAGGGGAATGAAGTTGGGGAGGTCG
GGGGGCTCCAGCAAACCTGGAAGCGCAAAAATGGCGAGGATTACAGTCCT
GCTGGTGTATGAAACGACCCGCTGTGAATCTTCCACGTCCAGCAAAACAT
CCCCCTTCCAGAAGGTCTTCGAGTTGACAACGATACATTTCCCCTCAAGA
TCCGTCGCGAATTCTGTCATATACGTAGTACACGGGTACCTCTCTCTACA
TGCGGAAGACAACGTTTGCTTTTGTCTGCTGCATGTACGTACTTGGGAAC
ATGTGATTTCTGCAATCAGTCGAGCAGAAAATTCTCAAAGAGCTTCTTGA
ACGAGGGAAATGGTAGAAACGATAGCTCCAGAACCAGTGGACGTGATGGT
GGAGGAAGGAGACGCGGACGACCACATCGGCTTAAGCTAACTCAAAAATG
GGGGGGCGGGGGAGGAGGCCGTGTCGCCGATGGTATCCCTAGATATGTCG
ATGGTTGCGATCAAACCCGAGGGTTAGAAGAGAAGGTGATGACGTTTCTG
ACCTCTTTCGAGCGTTTTTTTTGCATTGTTGATGTAGACGGCTTTAATGT
TGGCGGGACCGTATCGATGATATGCCACGATGTCGATCGTCTAATGCACG
CGTGCGAATACAACGAGATTCGTACATGTTATTGTCCGGCGGGAGTATTT
CCGGGTGGCAGTCGAACAACGTTTTTGGGGCGTATGTTTCTCGCGTTAAC
GATGCGACGATCGTATTTCGGGACGGTTCGGTCGATTGTTACTTGTGTAG
CAAGTTCTAGCGAGAGGGGAATGAAGTTGGGGAGGTCGGGGGGCTCCAGC
AAACCTGGAAGCGCAAAAATGGCGAGGATTACAGTCCTGCTGGTGTATGA
AACGACCCGCTGTGAATCTTCCACGTCCAGCAAAACATCCCCCTTCCAGA
AGGTCTTCGAGTTGACAACGATACATTTCCCCTCAAGATCCGTCGCGAAT
TCTGTCATATACGTAGTACACGGGTACCTCTCTCTACATGCGGAAGACAA
CGTTTGCTTTTGTCTGCTGCATGTACGTACTTGGGAACATGTGATTTCTG
CAATCAGTCGAGCAGAAAATTCTCAAAGAGCTTCTTGA back to top
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