mRNA_S-dermatodea_contig11336.862.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11336.862.1
Unique NamemRNA_S-dermatodea_contig11336.862.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig11336.862.1 vs. uniprot
Match: D8LBA2_ECTSI (GPA4, alpha subunit of a heterotrimeric G protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBA2_ECTSI)

HSP 1 Score: 384 bits (985), Expect = 1.430e-131
Identity = 183/223 (82.06%), Postives = 205/223 (91.93%), Query Frame = 1 
Query:   13 EAERNHFKILLLGAGESGKSTVLKQVKLIYKGRLGDEDLQQCAMAIRKNAVECMQGVLKAMDTLGISVGLAENAPRKKRVRSFTEETLFTPEVADDIATLWADPGVKEAYSRQDQYWLLDAASYYFDHALRLGQPDYAANDEDVIMTRIRTTGIDTTEFSEPPYMYSVVDVGGQRNERRKWIHCFDNVRGVVFLVGLNGYNQRLFEDSAVNKMQESLNLFQQV 681
            E  RNHFKILLLGAGESGKSTVLKQVK+IY+GR+ D+DLQQC MAIRKN++ECMQGVL+AMDT  I++GLAENAPRKKRVR F EE +FTP VADDIA+LWADPGV+EAY RQ +YWLLD ASYYFD+ALRLGQ D+   DEDVIMTRIRTTGIDTT+F+EPPYMYSVVDVGGQRNERRKWIHCFDNVR VVFLVGLNGY+QRLFEDS++NKM+ESLNLF+QV
Sbjct:   30 ENSRNHFKILLLGAGESGKSTVLKQVKMIYRGRIADDDLQQCVMAIRKNSIECMQGVLRAMDTFEITLGLAENAPRKKRVREFAEEGVFTPAVADDIASLWADPGVREAYGRQSEYWLLDGASYYFDNALRLGQADFVPTDEDVIMTRIRTTGIDTTDFTEPPYMYSVVDVGGQRNERRKWIHCFDNVRCVVFLVGLNGYDQRLFEDSSINKMRESLNLFRQV 252
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BLAST of mRNA_S-dermatodea_contig11336.862.1 vs. uniprot
Match: A0A835YY90_9STRA (GPA4, alpha subunit of a heterotrimeric G protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY90_9STRA)

HSP 1 Score: 291 bits (746), Expect = 4.630e-95
Identity = 137/218 (62.84%), Postives = 175/218 (80.28%), Query Frame = 1 
Query:   28 HFKILLLGAGESGKSTVLKQVKLIYKGRLGDEDLQQCAMAIRKNAVECMQGVLKAMDTLGISVGLAENAPRKKRVRSFTEETLFTPEVADDIATLWADPGVKEAYSRQDQYWLLDAASYYFDHALRLGQPDYAANDEDVIMTRIRTTGIDTTEFSEPPYMYSVVDVGGQRNERRKWIHCFDNVRGVVFLVGLNGYNQRLFEDSAVNKMQESLNLFQQV 681
            +FKILLLGAGESGKSTVLKQV+LI+KG++  +D++QC  AIRKN+VECMQ VL+AM    I +    NA  + R+ +  E+T F+ +VADDI  LW+D GVK  Y ++D YWLLDAA+YYFD   R+  P +   ++DVIMTR+RTTGID+T+F EPP+ YSVVDVGGQRNERRKW+HCF+NV+ VV+LVGL+GYNQ LFED++VN+MQESL LF+QV
Sbjct:   28 NFKILLLGAGESGKSTVLKQVRLIHKGKMTAKDIRQCTDAIRKNSVECMQAVLQAMTVHSIPLANEANAEARTRILTIQEDTTFSQQVADDITQLWSDTGVKACYEKRDLYWLLDAAAYYFDEVQRIADPGFEPTEDDVIMTRVRTTGIDSTDFVEPPFSYSVVDVGGQRNERRKWVHCFENVKAVVYLVGLSGYNQCLFEDASVNRMQESLKLFKQV 245
[Close]
BLAST of mRNA_S-dermatodea_contig11336.862.1 vs. uniprot
Match: A0A835ZKP0_9STRA (GPA4, alpha subunit of a heterotrimeric G protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKP0_9STRA)

HSP 1 Score: 282 bits (722), Expect = 1.280e-91
Identity = 136/225 (60.44%), Postives = 173/225 (76.89%), Query Frame = 1 
Query:    7 AEEAERNHFKILLLGAGESGKSTVLKQVKLIYKGRLGDEDLQQCAMAIRKNAVECMQGVLKAMDTLGISVGLAENAPRKKRVRSFTEETLFTPEVADDIATLWADPGVKEAYSRQDQYWLLDAASYYFDHALRLGQPDYAANDEDVIMTRIRTTGIDTTEFSEPPYMYSVVDVGGQRNERRKWIHCFDNVRGVVFLVGLNGYNQRLFEDSAVNKMQESLNLFQQV 681
            ++E +  + KILLLGAGESGKSTVLKQV++IYKGR+  +D++QC  AIR+NA+E MQ VL+AM   GI +     A  + R+   +E++  T +VADDI  LW D GVK  Y ++D YWLLDAA+YYF+   R+  P Y   +EDVIMTR+RTTGID TEF E PY +SVVDVGGQRNERRKWIHCF+NV+ VV+LVGL+GYNQ LFED++VN+MQES+ LF+QV
Sbjct:    8 SDEQQLQNIKILLLGAGESGKSTVLKQVRMIYKGRMSAQDVRQCVEAIRRNAIESMQAVLQAMKVYGIPLEDEAKAAARTRIIGLSEDSALTKDVADDITALWNDGGVKACYEKRDLYWLLDAAAYYFNEVQRISDPKYEPTEEDVIMTRVRTTGIDHTEFIEHPYNWSVVDVGGQRNERRKWIHCFENVKAVVYLVGLSGYNQCLFEDASVNRMQESIKLFRQV 232
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BLAST of mRNA_S-dermatodea_contig11336.862.1 vs. uniprot
Match: A0A6S9GGW2_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GGW2_HETAK)

HSP 1 Score: 265 bits (676), Expect = 8.290e-85
Identity = 131/228 (57.46%), Postives = 168/228 (73.68%), Query Frame = 1 
Query:    1 AEAEEAERNHFKILLLGAGESGKSTVLKQVKLIYKGRLGDEDLQQCAMAIRKNAVECMQGVLKAMDTLGISVGLAENAPRKKRVRSFTEETLFTPEVADDIATLWADPGVKEAYSRQDQYWLLDAASYYFDHALRLGQPDYA-ANDEDVIMTRIRTTGIDTTEFSEPPYMYSVVDVGGQRNERRKWIHCFDNVRGVVFLVGLNGYNQRLFEDSAVNKMQESLNLFQQV 681
            AEA+  E N FKILLLGAGESGKSTV+KQ+K+IYK  +  ++ ++   AIR+NA++ MQ +L+AMDTL I V   E +    RV+    +   TP++A +IA LWAD GV+  Y R+ +YWLLDAA YY D  LRLG  DYA   +ED+IMTR+RTTGI  TEF + P  Y++VDVGGQR+ERRKWIHCFD+V+ ++FLVGL+GYNQ LFED+  N+M ESL LFQ V
Sbjct:   25 AEAQAEEENLFKILLLGAGESGKSTVVKQIKMIYKNGVSKKEKEEYIGAIRRNAIDVMQTILEAMDTLSIDVSKEELSEAATRVKEIAADATLTPDLAQNIADLWADAGVQACYERRAEYWLLDAAPYYLDEVLRLGAADYADPTEEDMIMTRVRTTGIVITEFDDGPSRYNIVDVGGQRSERRKWIHCFDDVKAIIFLVGLSGYNQVLFEDNTQNRMTESLELFQDV 252
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BLAST of mRNA_S-dermatodea_contig11336.862.1 vs. uniprot
Match: A0A835Z6Q6_9STRA (GPA5, alpha subunit of a heterotrimeric G protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Q6_9STRA)

HSP 1 Score: 263 bits (672), Expect = 3.340e-84
Identity = 125/226 (55.31%), Postives = 169/226 (74.78%), Query Frame = 1 
Query:    4 EAEEAERNHFKILLLGAGESGKSTVLKQVKLIYKGRLGDEDLQQCAMAIRKNAVECMQGVLKAMDTLGISVGLAENAPRKKRVRSFTEETLFTPEVADDIATLWADPGVKEAYSRQDQYWLLDAASYYFDHALRLGQPDYAANDEDVIMTRIRTTGIDTTEFSEPPYMYSVVDVGGQRNERRKWIHCFDNVRGVVFLVGLNGYNQRLFEDSAVNKMQESLNLFQQV 681
            EA++ E+  FKILLLGAGESGKSTV+KQVKLIYKG +  ++ ++   AIR+N ++ MQ +L AM++ GI +    +     RVR    E   +  +A D+  LWAD G++  Y R+D++WLLDA+ YYF+ A+RL +PDY   DED+IMTRIRTTGI  TEF + PY +S+VDVGGQR+ERRKWIHCFD+V+ ++FL GL+GY+Q LFED+AVN+M ESL LF++V
Sbjct:   25 EAQDKEQYQFKILLLGAGESGKSTVVKQVKLIYKGVVTAKEKEEYTSAIRRNVIDSMQTMLDAMESFGIELARPGSGDAAARVRGADAEAALSEALAADVTALWADEGLRACYERRDEFWLLDASHYYFEEAMRLAEPDYEPTDEDMIMTRIRTTGIVVTEFEDKPYSFSLVDVGGQRSERRKWIHCFDDVKAIIFLEGLSGYHQVLFEDTAVNRMHESLQLFEEV 250
[Close]
BLAST of mRNA_S-dermatodea_contig11336.862.1 vs. uniprot
Match: D8LTN0_ECTSI (GPA5, alpha subunit of a heterotrimeric G protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTN0_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 8.660e-80
Identity = 121/225 (53.78%), Postives = 165/225 (73.33%), Query Frame = 1 
Query:   16 AERNHFKILLLGAGESGKSTVLKQVKLIYKGRLGDEDLQQCAMAIRKNAVECMQGVLKAMDTLGISVGLAENA---PRKKRVRSFTEETLFTPEVADDIATLWADPGVKEAYSRQDQYWLLDAASYYFDHALRLGQPDYAANDEDVIMTRIRTTGIDTTEFSEPPYMYSVVDVGGQRNERRKWIHCFDNVRGVVFLVGLNGYNQRLFEDSAVNKMQESLNLFQQV 681
            A++ H K+LLLGAGESGKSTV+KQVK+IYKG +  ++    A AIR+N +E MQ ++  + TLG+++   +       K+ +   T E   TPE+A+D++ LWAD G++E +SR+ ++W LDA  YY   A RL  P+    DED+IMTR RTTGI  TEFS+ PY YS+VDVGGQR+ERRKW+HCFD+V+ +VFLVGL+GY+Q LFED++VN+MQESL LF +V
Sbjct:   29 ADQRHVKVLLLGAGESGKSTVVKQVKMIYKGGVSKKEKDDYARAIRRNVIESMQTLIDTLGTLGLALKGDDQEGLKAAKENIALLTPEDTLTPEIAEDVSKLWADEGMQELWSRRSEFWALDATPYYLQEARRLADPELEVTDEDMIMTRTRTTGIIVTEFSDNPYTYSLVDVGGQRSERRKWMHCFDDVKAIVFLVGLSGYHQVLFEDNSVNRMQESLELFTEV 253
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BLAST of mRNA_S-dermatodea_contig11336.862.1 vs. uniprot
Match: A0A6H5L0R0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0R0_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 3.390e-73
Identity = 114/224 (50.89%), Postives = 159/224 (70.98%), Query Frame = 1 
Query:   10 EEAERNHFKILLLGAGESGKSTVLKQVKLIYKGRLGDEDLQQCAMAIRKNAVECMQGVLKAMDTLGISVGLAENAPRKKRVRSFTEETLFTPEVADDIATLWADPGVKEAYSRQDQYWLLDAASYYFDHALRLGQPDYAANDEDVIMTRIRTTGIDTTEFSEPPYMYSVVDVGGQRNERRKWIHCFDNVRGVVFLVGLNGYNQRLFEDSAVNKMQESLNLFQQV 681
            +E ER H+KILLLG GE+GKSTVLKQ+K IYKG +   + +   +AIR+N ++ MQ +L+A   LGI +   E A    RV    E T  +PE+  D+  LW + GV+ AY  + +YWLLDAA+YYFD+  R G   +A N+ED++M R RT+GI+ T+ ++  + +SVVDVGGQR+ERRKWIHCFD+V+ ++F+V L+GYNQ LFED+ VN+M E L LF++V
Sbjct:   27 QEEERTHYKILLLGPGEAGKSTVLKQLKCIYKGGIPLAEQRMHGLAIRRNTIQSMQAILEATVVLGIPLE-GEAAAAAGRVLMLDEGTDLSPEIVQDVVLLWHNGGVRAAYGERHRYWLLDAAAYYFDNVERFGSESFAPNEEDMLMARARTSGINVTQIADGLHKFSVVDVGGQRSERRKWIHCFDDVKAIIFVVALSGYNQVLFEDTGVNRMHEGLQLFEEV 249
[Close]
BLAST of mRNA_S-dermatodea_contig11336.862.1 vs. uniprot
Match: UPI0006449EC0 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006449EC0)

HSP 1 Score: 226 bits (575), Expect = 2.210e-69
Identity = 113/220 (51.36%), Postives = 151/220 (68.64%), Query Frame = 1 
Query:   31 FKILLLGAGESGKSTVLKQVKLIYKGRLGDEDLQQCAMAIRKNAVECMQGVLKAMDTLGISVGLAENAPRKKRVRSFT--EETLFTP-EVADDIATLWADPGVKEAYSRQDQYWLLDAASYYFDHALRLGQPDYAANDEDVIMTRIRTTGIDTTEFSEPPYMYSVVDVGGQRNERRKWIHCFDNVRGVVFLVGLNGYNQRLFEDSAVNKMQESLNLFQQV 681
            F++LLLGAGESGKSTV+KQ+K IYK ++ D +LQ  A  I KN V CMQ +L+A +TLG+ +   E+  R   +RSF   +E    P  +  DI  LW D  +++ + R+ +YW LDA  YYFD+  R    D+   +ED+IMTR+RTTGI  TEF E P  + VVDVGGQRNER+KWIHCFD+V+ ++F+V L GY+Q +FED   N+MQESL LF Q+
Sbjct:   34 FRVLLLGAGESGKSTVVKQLKSIYKIQVDDAELQSYAANIHKNTVLCMQVLLEACETLGVELSDQESKKRANNIRSFQFEQEVKQMPVSIGLDIEELWKDQDIQKIWERRSEYWFLDATPYYFDNINRFLDDDFRPTEEDIIMTRVRTTGISVTEFDEGPVHFRVVDVGGQRNERKKWIHCFDDVKALLFVVNLAGYDQVMFEDPTQNRMQESLTLFGQI 253
[Close]
BLAST of mRNA_S-dermatodea_contig11336.862.1 vs. uniprot
Match: A0A8J4Q695_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q695_9MYCE)

HSP 1 Score: 224 bits (572), Expect = 7.170e-69
Identity = 116/224 (51.79%), Postives = 150/224 (66.96%), Query Frame = 1 
Query:   31 FKILLLGAGESGKSTVLKQVKLIYKGRLGDEDLQQCAMAIRKNAVECMQGVLKAMDTLGISVGLAENAPRKKRVRSFTEETLFTPEVAD-------DIATLWADPGVKEAYSRQDQYWLLDAASYYFDHALRLGQPDYAANDEDVIMTRIRTTGIDTTEFSEPPYMYSVVDVGGQRNERRKWIHCFDNVRGVVFLVGLNGYNQRLFEDSAVNKMQESLNLFQQV 681
            F+ILLLGAGESGKSTV+KQ+K IYK ++ + +LQ  A+ I KN V CMQ +L+A +TL I     E   R   VRSF     F P+V         DI  LW DP +++ + R+ +YW LDA  YYFD+  R    D+   +ED IMTR+RTTGI  TEF E P  + VVDVGGQRNER+KWIHCFD+V+ ++F+V L GY+Q +FED + N+MQESL LF Q+
Sbjct:   34 FRILLLGAGESGKSTVVKQLKSIYKIQVDEAELQSYAVNIHKNTVLCMQVLLEAGETLNIEFSNIETKKRAANVRSFQ----FEPDVKQMPVSIGLDIEELWKDPEIQKIWDRRSEYWFLDATPYYFDNIQRFLDDDFIPTEEDCIMTRVRTTGISVTEFDEGPVHFRVVDVGGQRNERKKWIHCFDDVKALLFVVNLAGYDQVMFEDPSQNRMQESLTLFGQI 253
[Close]
BLAST of mRNA_S-dermatodea_contig11336.862.1 vs. uniprot
Match: GPA8_DICDI (Guanine nucleotide-binding protein alpha-8 subunit n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=GPA8_DICDI)

HSP 1 Score: 223 bits (567), Expect = 8.220e-68
Identity = 115/224 (51.34%), Postives = 151/224 (67.41%), Query Frame = 1 
Query:   31 FKILLLGAGESGKSTVLKQVKLIYKGRLGDEDLQQCAMAIRKNAVECMQGVLKAMDTLGISVGLAENAPRKKRVRSFTEETLFTPEVAD-------DIATLWADPGVKEAYSRQDQYWLLDAASYYFDHALRLGQPDYAANDEDVIMTRIRTTGIDTTEFSEPPYMYSVVDVGGQRNERRKWIHCFDNVRGVVFLVGLNGYNQRLFEDSAVNKMQESLNLFQQV 681
            F+ILLLGAGESGKSTV+KQ+K IYK ++ D++L   A+ I KN V CMQ +L+A +TLGI +   E   R   V+SF     F PEV         DI  LW D  +++ + R+ +YW LDA  YYF++  R    D+   +ED IMTR+RTTGI  TEF E P  + VVDVGGQRNER+KWIHCFD+V+ ++F+V L GY+Q +FED + N+MQESL LF Q+
Sbjct:   33 FRILLLGAGESGKSTVVKQLKSIYKIQVDDDELHSYAVNIHKNTVLCMQVLLEAGETLGIELTDPETKKRAINVKSFQ----FEPEVKQMPVSIGLDIEELWRDEDIQKIWDRRSEYWFLDATPYYFENIQRFLDDDFVPTEEDCIMTRVRTTGISVTEFDEGPVHFRVVDVGGQRNERKKWIHCFDDVKALLFVVNLAGYDQVMFEDPSQNRMQESLTLFGQI 252
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11336.862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBA2_ECTSI1.430e-13182.06GPA4, alpha subunit of a heterotrimeric G protein ... [more]
A0A835YY90_9STRA4.630e-9562.84GPA4, alpha subunit of a heterotrimeric G protein ... [more]
A0A835ZKP0_9STRA1.280e-9160.44GPA4, alpha subunit of a heterotrimeric G protein ... [more]
A0A6S9GGW2_HETAK8.290e-8557.46Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A835Z6Q6_9STRA3.340e-8455.31GPA5, alpha subunit of a heterotrimeric G protein ... [more]
D8LTN0_ECTSI8.660e-8053.78GPA5, alpha subunit of a heterotrimeric G protein ... [more]
A0A6H5L0R0_9PHAE3.390e-7350.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0006449EC02.210e-6951.36hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A8J4Q695_9MYCE7.170e-6951.79Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
GPA8_DICDI8.220e-6851.34Guanine nucleotide-binding protein alpha-8 subunit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11336contigS-dermatodea_contig11336:921..7327 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score384.8
Seed ortholog evalue2.8e-104
Seed eggNOG ortholog2880.D8LBA2
Preferred namegpaH
KEGG koko:K04630
KEGG Pathwayko04015,ko04022,ko04024,ko04062,ko04071,ko04261,ko04360,ko04371,ko04540,ko04611,ko04670,ko04713,ko04723,ko04724,ko04725,ko04726,ko04727,ko04728,ko04730,ko04914,ko04915,ko04916,ko04921,ko04923,ko04924,ko04926,ko04934,ko04971,ko05012,ko05030,ko05032,ko05034,ko05133,ko05142,ko05145,ko05200,map04015,map04022,map04024,map04062,map04071,map04261,map04360,map04371,map04540,map04611,map04670,map04713,map04723,map04724,map04725,map04726,map04727,map04728,map04730,map04914,map04915,map04916,map04921,map04923,map04924,map04926,map04934,map04971,map05012,map05030,map05032,map05034,map05133,map05142,map05145,map05200
KEGG ModuleM00695
GOsGO:0001664,GO:0003674,GO:0003824,GO:0003924,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005834,GO:0005886,GO:0007154,GO:0007165,GO:0007186,GO:0007187,GO:0007188,GO:0008150,GO:0009898,GO:0009966,GO:0009987,GO:0010469,GO:0010646,GO:0010810,GO:0010811,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019897,GO:0019898,GO:0022407,GO:0022409,GO:0023051,GO:0023052,GO:0030155,GO:0031234,GO:0031683,GO:0032092,GO:0032101,GO:0032103,GO:0032991,GO:0040012,GO:0040017,GO:0043393,GO:0043937,GO:0043938,GO:0044093,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044877,GO:0045595,GO:0045785,GO:0048518,GO:0048519,GO:0048583,GO:0048584,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0050920,GO:0050921,GO:0050923,GO:0050924,GO:0051094,GO:0051098,GO:0051099,GO:0051716,GO:0065007,GO:0065009,GO:0071944,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:1900120,GO:1900122,GO:1902494,GO:1903664,GO:1903665,GO:1903667,GO:1903669,GO:1905360
EggNOG free text desc.G-protein beta/gamma-subunit complex binding
EggNOG OGsKOG0082@1,KOG0082@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04031,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGPA4, alpha subunit of a heterotrimeric G protein
Ec32 orthologEc-27_004650.1
Exons5
Model size681
Cds size681
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11336.862.1prot_S-dermatodea_contig11336.862.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11336 921..7327 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924198.218005-CDS-S-dermatodea_contig11336:920..10221622924198.218005-CDS-S-dermatodea_contig11336:920..1022Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11336 921..1022 -
1694079086.1172428-CDS-S-dermatodea_contig11336:920..10221694079086.1172428-CDS-S-dermatodea_contig11336:920..1022Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11336 921..1022 -
1622924198.2313457-CDS-S-dermatodea_contig11336:2567..27901622924198.2313457-CDS-S-dermatodea_contig11336:2567..2790Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11336 2568..2790 -
1694079086.1325264-CDS-S-dermatodea_contig11336:2567..27901694079086.1325264-CDS-S-dermatodea_contig11336:2567..2790Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11336 2568..2790 -
1622924198.2441785-CDS-S-dermatodea_contig11336:4350..44601622924198.2441785-CDS-S-dermatodea_contig11336:4350..4460Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11336 4351..4460 -
1694079086.1418324-CDS-S-dermatodea_contig11336:4350..44601694079086.1418324-CDS-S-dermatodea_contig11336:4350..4460Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11336 4351..4460 -
1622924198.2544188-CDS-S-dermatodea_contig11336:6009..61721622924198.2544188-CDS-S-dermatodea_contig11336:6009..6172Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11336 6010..6172 -
1694079086.151877-CDS-S-dermatodea_contig11336:6009..61721694079086.151877-CDS-S-dermatodea_contig11336:6009..6172Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11336 6010..6172 -
1622924198.2637677-CDS-S-dermatodea_contig11336:7244..73271622924198.2637677-CDS-S-dermatodea_contig11336:7244..7327Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11336 7245..7327 -
1694079086.1614206-CDS-S-dermatodea_contig11336:7244..73271694079086.1614206-CDS-S-dermatodea_contig11336:7244..7327Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11336 7245..7327 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11336.862.1

>prot_S-dermatodea_contig11336.862.1 ID=prot_S-dermatodea_contig11336.862.1|Name=mRNA_S-dermatodea_contig11336.862.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=227bp
AEAEEAERNHFKILLLGAGESGKSTVLKQVKLIYKGRLGDEDLQQCAMAI
RKNAVECMQGVLKAMDTLGISVGLAENAPRKKRVRSFTEETLFTPEVADD
IATLWADPGVKEAYSRQDQYWLLDAASYYFDHALRLGQPDYAANDEDVIM
TRIRTTGIDTTEFSEPPYMYSVVDVGGQRNERRKWIHCFDNVRGVVFLVG
LNGYNQRLFEDSAVNKMQESLNLFQQV
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mRNA from alignment at S-dermatodea_contig11336:921..7327-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11336.862.1 ID=mRNA_S-dermatodea_contig11336.862.1|Name=mRNA_S-dermatodea_contig11336.862.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6407bp|location=Sequence derived from alignment at S-dermatodea_contig11336:921..7327- (Saccorhiza dermatodea SderLu1190fm monoicous)
GCGGAGGCGGAAGAGGCAGAGCGAAATCACTTCAAGATACTGCTGTTGGG
CGCTGGAGAGTCGGGCAAGAGTACAGTTCTCAAGTAAGTCGACCACGTCG
TTTGCGATCTGAGAGAGCTTGTTGGAGTTTGTACTTGTGTGCGCGCGCGG
TAAATGGGGATCTCACTGGTGTGGTTAAATGGACATGATGATGTAGGGAT
ACTTACCGGGTGGCTTATTGAGGGCCGAAGAGAGAATTGATGGGTGATCC
ATGATGCATGCGGCAGGTGAGGTCGTCGAGATCACTGTAATATTTATTCC
CGCATTTCATTATACGGCTGTTCATGCATACGGCTGTAATATTATATGTA
AACGTAGGGACCGTGTACTCCTGTTTTATTAGTAGTCGGCATGCGCATTG
TATAGGCGTCGCAGATTGCAGTCGGTGTTTGAGAGATAGATGTTGCACGA
GAAATGGCGTCAGGACGCTCGCTTGTCCCGGCTAGGCCAAACCAAAACAC
GGCCACTTTGGCCCCGGGGGTGCTACCTATTATCCCTTTTGGGACTAAGG
CTGTTTTCGGGTAACTGTTTGCTATTATTATATGCCCTTTTGTTTTGCGA
CTAAGGCTGTTTTCGCGTAACTGTTTGATATTATGGTAGCCAACAGTTAC
CCGAATACAGGCTTCGTCCCCAGGCTTAGTCCCAAAAAAGGGCAATTATA
GTATATACCTGGTACAGATCAAGAATGTGACCCATCAGTTTTTCCATCGG
AACAGGAGCTCGCCAGGTACGTGCATACATGATCGAAGGGCCTCTGTCTC
TTGTATCCTCCTCCGCCAACAAAGCGCTTGCTCTATCATTTGTTTTCTTG
TTTTTTTTTATCACACGTCTGCTGCAAGGCCGGCCTTCCGTGCCCTGTTG
AATTTATTTTGTTCGATTCTTGCACACAGAGATCACTTACGACCGCAGGT
GGATGCGCAACATAGAACCGAGGCGTTCACACAATAACTGCCAACCGTTT
ACGTTCCTTATCAGCACCGTGCATGGTGATTTCATATGTCGCGTATGCGC
TGATGGCCACCTGTGGTACCCCACGCGGGCCGTACGTCCCCCGCTTGTTT
TTTTACATTTTTTTCTTCTTTCCGTTTTTTTTTTTTTTTTTTTGCCATGA
ACCAGGCAAGTTAAATTGATCTACAAGGGCCGGCTCGGAGATGAAGACTT
GCAGCAATGCGCGATGGCCATCCGCAAGAACGCCGTGGAGTGCATGCAGG
GCGTCTTGAAGGCGATGGATACCTTGGGCATCTCTGTCGGCCTCGCGGAA
AACGCTCCTCGCAAGAAGGTGCGTTGTGTGAATACTTGCGCCGATAGAAG
TCAACAGAGCGGTGGCAGGGCGGGGGGCGGGGGGGGGGGGGGCAGAGGAG
GGACACGCCGCGTCCCATTGAACCCCGCCGCGTTTGCTCGGGCAGGTTTA
AAATTATGAAGGATCCTGGGACTCCTCCGTTCATGTTCCAAGCAGTTTGC
GTCTCTCGGGCAAAAGGGATGGCGGTGGCGGCGGCGGTCGGCCGTGGGGT
TGGCGATGGCGGGCTGTTACTGCGTTACCTGCGCTGTCGTATTCTGCCAA
TCAGATTGGGGGGGGGGGGGCGGTGTTACCGGCGCCACACAACAGTATTT
GTTTCGGGTGCATTTCGCGCGTCCTGATTTTTATCGTGATCGTGCACCGA
TCCAAAAGACAGCATGTATACTCGCCATTAACAACCGGTGGGTGGAGCCC
CGGTTGTGGTTTGTTTTTGCTCTGATCGTGCACGCCTGGCCGGGAGTCGT
TGCTTGTCGCCGCGCCGTTTGTCTGGCGATGCGTGCCGCGTGAGGCTGCG
CCGCGTGCCACTGCCCCAAAGAATCCAAATGCCGCACTTGTGTGGCCGAA
AAAACGGCTAGCGCTTCGACGTTCGATGGGATTTACTACACGGTCCAGAG
TTTACTACCCCGCCGCACCCAGGCAGCTGTCTCGTCTGTCGTCTTTATCA
CTCATCGGTTTGTAAGCAAAAGCAATCCCGCTGCCAACAGGGCGAGCGAG
ATATACTTAATTTACAGGCGCCCCGATTTGACGCTGCCCGCGAAGCTCTT
TCGCCATCTGGTGTAGTCGTGTTTTGTTTTTCGGACTCAGTTCTTAAAAG
GGTTAATGGCCGGACTGATTCACAGTTACTGTGTACAGTGGGTATTTTAG
TAGGTTTTTTCAGGTAGTTTCCGTACAGAGAAATGTAGACTGGTACTCCC
TTCCGTAGGGATGCGTCACAAGTGGGCGAAGTTATAGTTGCCCCACGGGA
CAACAGGCCGGAATGTTCCTGAGTTCGGGCTCGGCTCCAGCTTATGCGGT
GGTGGTTGCGGTGCTGGACATGGGGGAATTTGTATACACGCGGGATTTAT
GTTGCCCGGTCGTGTTTCGTTTTCCTCCACCGCGTGGGCGACATTTTTTG
TAAGACCGTCGTCCCTTCCACGCTTAGCAAAGCCAGCCGAGCCATCCTGT
TTTGCTTATGTCGTCCCTGTTTGTGCCTGCTTGCGGAGGCAGAGGCCTCA
TCTGACATTTTATCTGACATTTTTCTGGACTTTTTGTGGTGCTGCTCCGT
CGCCTTTTTTTGTTTTTTTTTGTCGCCTTCGTCCGCTCGTTCGGTTGTTT
CTCGTTCTCGTCTTTCTGCTTCGTTTTTTTGTTTTTTGTTTCGTTCGGTC
CGATTCGGTGCGGTGCTGTGCGGTGCTGTGGGGGTGCTGTGCGGTGCGGT
GCTGTGGGGGTGCTGTGCGGTGCGGTGCTGTGGGGGTGCTGTGCGGTGCT
GTGCGGTGCGGTGCGGTGCGGTGCGGTGCGGTGCGGTGCGATGCGATGCG
GTCCCGCGCGCACACAGCGAGTGCGAAGCTTCACGGAGGAGACGCTTTTC
ACGCCCGAGGTGGCGGACGACATCGCCACCTTGTGGGCAGATCCCGGGGT
AAAGGAAGCTTACAGCCGCCAGGACCAGTGAGTGCACATTTGAGACTTTG
CAATCGTGAATGAATTGTCATATCTTGGTGGGGTACCGTTTTTGTTTTTT
GGGGTGTTTTTAACGGTACGAGTAGAAGAAAAAGTGTTACATGCATACGC
ATGGGGAGAGATGGGATCATCCCTCGTGACACGGCAGGCGGTTTTGGAGA
AGTTTGAGGATCAGTCGTTTGTTACACGTGCGCAAAACATACACACGCAC
AGACACAGACACACACTCCTCGCGAAAAGTGAACGGAGCACATCGAAAGA
GTTTCGCATCGGGAATGTTTTCGTTCTTCACGGACGGCCAGAACCGACTG
GTCGTGGCTCCGGTGACCTCTGGTGTGCTATGGTAAGGGGTTCGGAAAAC
ACGCCGTAGACATTCACGCGAAGCCAGAGGTCCTCAAGGTATTTAACCTA
GCACCGGTCGGTCACTTAGTTACATCGTCGGCGTGTGGCGGCTTCTCTCG
TGAAGGGCTACGATATTTGGTATCGAAGACCACACGTTCCGCTGAAAAAG
ATCGGCGTATCCGCTGGAACGTTGTTCCTCAGCCTATGGTGCACTAGAGA
GAGAGAGAGAGAGGCATACAGGCAGTAGTTCAATTCCGACCCCTGGTCTG
GTGCGTTTGTTCACGCATCTGGCTACAAGTCGGGTCGGACTTAAACCGAT
CGGCGATAATAAGCTGTACTTGTATGGTATTTGAGAAATTTTCAAGCAGC
ACATAAAACAAAAGTGTATACCCCAAAACGCGACTTGGCAAACGCACAAC
GGCCTCGACAGAGTGTCGGCAAGTCAGAGCGGCTGCTGCTTGCTCTTTCT
TTATCGCGACATCATCGGCTCCGTGCGATGCGGGTGCGCTTCACGCCCTC
AGATCATACAGGGGCGAGGCGGGGCGGGCATATCGTATGAGCGCTACGCA
ATTTTCCCCAACGGATTTATCGTTCGAGGTAGTCGAGGTAGTCCATCGAT
CGTCGGTCTGGCCGCGGCGCGCGCCAGCGGCCGAGTCGAAACGGGTCGCT
CCCGTGAAGAACTGCTACGTATAGTAACTGCTGTCGATATTTTTTCTGCT
GCAGCCGAACAAAATGTAACCTCTCGGTCAGAGGAACCATGATGATACTG
TATGTTTTCACACTTGAACAACCAGCAAATTGCCGTCGAATCGGCCGATC
TTATCCCTTTTGGGACCAAGCCTGTTTTCGGTGTTAGGCCATCTGCACGC
ACTATACCTCACATGGAACAAGTACAGTACCCGAACGGTGGCTACTATAT
ACGAGTACTACTATATACTATATACTATATAGCCATCTGCCCGCACTATA
CCTCACATGGAACAGGTACAGTACCCGAACGTTGGCTACTATATACTATA
TACTCACAGATGGACTATTAATAACCCCCAAAACAGGTTCAGTCCCAAAA
GGGTTATAACACAAATACAGACGGTAGTCGATCGGTTCAATCACCATCCA
TTTTTTCGGGCCGGATCTTAAATCTTAAATCGTATGGGATCGTATGGGAT
CGGATCGGATCGGATCGTATCGGGTCGAACCGCGCAGGTACTGGCTTCTA
GACGCTGCGAGCTACTACTTCGACCACGCCCTGCGATTGGGGCAGCCGGA
CTACGCCGCGAACGACGAGGACGTGATCATGACGCGAATCAGGACCACGG
GCATCGACACCACAGAGTTTTCCGAGCCACCCTACATGTACTCCGTCGTA
GACGTCGGGGGGCAGAGGAACGAGAGGAGAAAGTGGATCCACTGCTTTGA
CAACGTCCGGGTAAATAAATGCATTAATAATTAAGTTGTTTTTTTGTTTT
CCCTCATGAACTATTATAGCCTGCTTGACGTATCCGGTAGCGCAGCGATG
TGCCAGCCTTGGGCAAGGGCTCTACGTAGCCGCGTCGAGATTCGAATTAC
GCTGTTTTCTTCTGCAGTTTTTTTGCTTGTGTTTTTTTTGTTTTGTTTTT
TCGGTGTTTTTGAGTTTTTTGCTTATTTTCTCTTTTGGACGAAAGAAAAA
GCTTTGTGTTTGTACAGTTACAATAGTTTTGGGGGTCAACTATTATTCTT
AGTGTGTGTATTATAGTGTTTTGAGCGTGCTATTTTCGCCTTTGGAGATA
GAGGAGCTTGATTGGTTGTATGATATACCAGTGGCACACTCGTACCAGCA
GTGGCACACTCCACTGCTGCTGTTGGCTCCTTCTCGAGCGTTGAGGCGCT
TACGTTTATTTTCTTCTTTTTGCTGTCAGCCAGCGTTTCGTTTTTTTGCC
TCGCCCCGTTTTCCTGTCTTGCCTTGACCTGCGTTCGCCACGGCGTCGAT
CTGGGTGGCGATCATGCAACAACTTTTATTGAACGAACTTGCAATCTGTT
GCGCTGATGTATCCTCTTAATAGCTATATGCCGGGATAGCGCCACGGAGA
CCGACCGCATGTGTGGCTGGCCTCTGCGCACGGCAAGTTGGGCTCGGCGC
TCCGGCGGCGAGCTACCCAGATGCCTGCCGTCACGTCTTTGAATGCCAAT
CCATCGTGGCGTACCCGCTTCTGCGACTGGTGAACGCTGGCAGTGCATGG
GCGTCTCGCGAGAAAGGCGGGGTCGGGGTTATGGCCTAACGATTGTTTTG
TCCCAAAAGGAAGGGTATCGGCCGTACAACGTGTGATACTATAATACGAG
GGAAGAGAAGCGCACTACAGTATAGTACTTTTTACGATGATGTCACGGAG
GTCACAGTATCACGGTATTGTTATAGCAGCCTAATTAACTATTATTGAGC
TAATTATTACTATTATTGAGCTAATTAGACCAGACCTATTATTGAGCTAA
TTAGACCAGACCTATTTTTGAGCTAATTTGCCAAAAAACGAACGCAGTGA
AGATAAAAAACATAAATCAATATGGTCTGGCCTTTACGATATGCATAAAA
ACACCCGCGATCTTCCGGCCTCAAGCGTAAAGAAAAATCTGAACCTGTAG
CAACCATTACAAGGTGTTCGGGCCGACGTTGAGAAAGTACAATAGTACAA
TACTTCCTTACGCTAGAATAGTAGCAGATACTGTAGCAGATATTTGGGTC
CTGATGACTACTGTTGTGTACCCTCTGTAATAGTGATTTGCCTTCATCGT
GCGTTGAGACATATCTCCTCCTTCTTTTACTCTCGCACGATTGTTTGCCA
CGATGCCCCCCGCGCACAGCTATAGCTCCGTACAACATTTTCTGCCTCGA
TTTTGGAGGACTTTTTTTTTTCTTGTCTCTCGTGTCTCTCACGTTCCTCG
TTTCCGTCCCCTTATCATACGCATGATGGCCCGATTTCGCCTCCCTCCCC
AAAAGGGCGTGGTTTTCCTGGTGGGCCTGAACGGGTATAACCAGCGCCTG
TTCGAGGACAGCGCCGTCAACAAGATGCAGGAGAGCCTCAACCTCTTCCA
GCAGGTA
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Coding sequence (CDS) from alignment at S-dermatodea_contig11336:921..7327-

>mRNA_S-dermatodea_contig11336.862.1 ID=mRNA_S-dermatodea_contig11336.862.1|Name=mRNA_S-dermatodea_contig11336.862.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1362bp|location=Sequence derived from alignment at S-dermatodea_contig11336:921..7327- (Saccorhiza dermatodea SderLu1190fm monoicous)
GCGGAGGCGGAAGAGGCAGAGCGAAATCACTTCAAGATACTGCTGTTGGG
CGCTGGAGAGTCGGGCAAGAGTACAGTTCTCAAGCGGAGGCGGAAGAGGC
AGAGCGAAATCACTTCAAGATACTGCTGTTGGGCGCTGGAGAGTCGGGCA
AGAGTACAGTTCTCAAGCAAGTTAAATTGATCTACAAGGGCCGGCTCGGA
GATGAAGACTTGCAGCAATGCGCGATGGCCATCCGCAAGAACGCCGTGGA
GTGCATGCAGGGCGTCTTGAAGGCGATGGATACCTTGGGCATCTCTGTCG
GCCTCGCGGAAAACGCTCCTCGCAAGAAGGCAAGTTAAATTGATCTACAA
GGGCCGGCTCGGAGATGAAGACTTGCAGCAATGCGCGATGGCCATCCGCA
AGAACGCCGTGGAGTGCATGCAGGGCGTCTTGAAGGCGATGGATACCTTG
GGCATCTCTGTCGGCCTCGCGGAAAACGCTCCTCGCAAGAAGCGAGTGCG
AAGCTTCACGGAGGAGACGCTTTTCACGCCCGAGGTGGCGGACGACATCG
CCACCTTGTGGGCAGATCCCGGGGTAAAGGAAGCTTACAGCCGCCAGGAC
CACGAGTGCGAAGCTTCACGGAGGAGACGCTTTTCACGCCCGAGGTGGCG
GACGACATCGCCACCTTGTGGGCAGATCCCGGGGTAAAGGAAGCTTACAG
CCGCCAGGACCAGTACTGGCTTCTAGACGCTGCGAGCTACTACTTCGACC
ACGCCCTGCGATTGGGGCAGCCGGACTACGCCGCGAACGACGAGGACGTG
ATCATGACGCGAATCAGGACCACGGGCATCGACACCACAGAGTTTTCCGA
GCCACCCTACATGTACTCCGTCGTAGACGTCGGGGGGCAGAGGAACGAGA
GGAGAAAGTGGATCCACTGCTTTGACAACGTCCGGGTACTGGCTTCTAGA
CGCTGCGAGCTACTACTTCGACCACGCCCTGCGATTGGGGCAGCCGGACT
ACGCCGCGAACGACGAGGACGTGATCATGACGCGAATCAGGACCACGGGC
ATCGACACCACAGAGTTTTCCGAGCCACCCTACATGTACTCCGTCGTAGA
CGTCGGGGGGCAGAGGAACGAGAGGAGAAAGTGGATCCACTGCTTTGACA
ACGTCCGGGGCGTGGTTTTCCTGGTGGGCCTGAACGGGTATAACCAGCGC
CTGTTCGAGGACAGCGCCGTCAACAAGATGCAGGAGAGCCTCAACCTCTT
CCAGCAGGTAGGCGTGGTTTTCCTGGTGGGCCTGAACGGGTATAACCAGC
GCCTGTTCGAGGACAGCGCCGTCAACAAGATGCAGGAGAGCCTCAACCTC
TTCCAGCAGGTA
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