mRNA_S-dermatodea_contig1132.853.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig1132.853.1
Unique NamemRNA_S-dermatodea_contig1132.853.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig1132.853.1 vs. uniprot
Match: A0A6H5JZ94_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ94_9PHAE)

HSP 1 Score: 395 bits (1016), Expect = 6.670e-134
Identity = 206/311 (66.24%), Postives = 232/311 (74.60%), Query Frame = 3
Query:    3 MRQEIEVMRHLYHRSVVLLFEVLEEREEWEAGDGEGRVCMVQEYMEGGPTMTFDDDTGLFKRPGASRCGGSGGAGDAGERRSVGDAYSEDEAKPLFRDLLQGLLYLHEEGVVHRDIKPDNLLLFENGTLRICDFGCAQHVKIARR-PNKHDSNEGAGGDGGGQETEEDE--------------------------EGLTNSVGTYAFHCPESVTGDGVPYSGRAADAWAAACTLYCWTFACLPFHHESLEQLFEKIRNGELDVGQAISPELAALLKGMLEKDPAGRIGLQAALEHSWMQGVPDPPPPAGFV 854
            MRQEIEVMRHLYHRSVVLLFEVLEE++EWE G  EGRVCMV+EYMEGGPTMTFDD++GLFKRP     GG  G          G  YSEDEAKPLFRDLLQGLLYLH + +VHRD+KPDNLL+FENGTLRICDFGCA++VKI RR P+K  S +  G +  G+  EED                           EGLT SVGTY FH PESV GDG  YSGRAADAWAAACTLYCWTF CLPFH  SLE++FEKI+  ++DVG+A+SPEL +LL+GML KDP  RIGLQAALEH WM+GVPDPPPPAGF+
Sbjct:  136 MRQEIEVMRHLYHRSVVLLFEVLEEQDEWEDGQ-EGRVCMVEEYMEGGPTMTFDDESGLFKRPD----GGGSGTKAXXXXXXXGSFYSEDEAKPLFRDLLQGLLYLHGKNIVHRDVKPDNLLIFENGTLRICDFGCARYVKIVRRQPSK--SKDATGSEAMGRCHEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLTGSVGTYTFHSPESVMGDGKTYSGRAADAWAAACTLYCWTFGCLPFHDPSLERVFEKIKEQQVDVGKAVSPELTSLLRGMLCKDPLQRIGLQAALEHPWMRGVPDPPPPAGFI 439          
BLAST of mRNA_S-dermatodea_contig1132.853.1 vs. uniprot
Match: D8LHH8_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH8_ECTSI)

HSP 1 Score: 392 bits (1007), Expect = 2.520e-132
Identity = 206/312 (66.03%), Postives = 232/312 (74.36%), Query Frame = 3
Query:    3 MRQEIEVMRHLYHRSVVLLFEVLEEREEWEAGDGEGRVCMVQEYMEGGPTMTFDDDTGLFKRPGASRCGGSGGAGDAGERRSVGDAYSEDEAKPLFRDLLQGLLYLHEEGVVHRDIKPDNLLLFENGTLRICDFGCAQHVKIARR-PNKHDSNEGAGGDGGGQETEEDE---------------------------EGLTNSVGTYAFHCPESVTGDGVPYSGRAADAWAAACTLYCWTFACLPFHHESLEQLFEKIRNGELDVGQAISPELAALLKGMLEKDPAGRIGLQAALEHSWMQGVPDPPPPAGFV 854
            MRQEIEVMRHLYHRSVVLLFEVLEE++ WE G  EGRVCMVQEYMEGGPTMTFDD++GLFKRP     GGSG              YSEDEAKPLFRDLLQGLLYLH + +VHRD+KPDNLL+FENGTLRICDFGCA++VKI RR P+K  S +  G +  G+   ED+                           EGLT SVGTY FH PESV GDG  YSGRAADAWAAACTLYCWTF CLPFH  SLE++FEKI+  E+DVG+A+SP+LA+LL+GML KDP  RIGLQAALEH WM+GVPDPPPPAGF+
Sbjct:  149 MRQEIEVMRHLYHRSVVLLFEVLEEQDGWEDGQ-EGRVCMVQEYMEGGPTMTFDDESGLFKRPDG---GGSGTXXXXXXXXXXXSFYSEDEAKPLFRDLLQGLLYLHGKNIVHRDVKPDNLLIFENGTLRICDFGCARYVKIVRRQPSK--SKDANGSEAMGRCQGEDQQQPXXXXXXXXXXXXXXXXXXXXXXXXEGLTGSVGTYTFHSPESVMGDGKTYSGRAADAWAAACTLYCWTFGCLPFHDPSLERVFEKIKGQEVDVGKAVSPDLASLLRGMLCKDPLQRIGLQAALEHPWMRGVPDPPPPAGFI 454          
BLAST of mRNA_S-dermatodea_contig1132.853.1 vs. uniprot
Match: A0A836CED4_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CED4_9STRA)

HSP 1 Score: 208 bits (529), Expect = 3.270e-61
Identity = 118/277 (42.60%), Postives = 157/277 (56.68%), Query Frame = 3
Query:    6 RQEIEVMRHLYHRSVVLLFEVLEEREEWEAGDGEGRVCMVQEYMEGGPTMTFDDDTGLFKRPGASRCGGSGGAGDAGERRSVGDAYSEDEAKPLFRDLLQGLLYLHEEGVVHRDIKPDNLLLFENGTLRICDFGCAQHVKIARRPNKHDSNEGAGGDGGGQETEEDEEGLTNSVGTYAFHCPESVTGDGVPYSGRAADAWAAACTLYCWTFACLPFHHESLEQLFEKIRNGELDVGQAISPELAALLKGMLEKDPAGRIGLQAALEHSWMQGVPDPP 836
            R+EI++MRHLYHR+VVLLFEVLE  + +   D +  +CMV E ME GPTM    D G F                  ER   G  + E  A+ +F DL++G+ YLH  G+ HRDIKPDNL+++ENGTLRI DFGCA  V     P +                  D   L ++ G Y F  PE +     PY G  AD W+A  TLY W F  +PF+ +S E L+E IRN  +++G+A+S +L  LL  +L+KDP  RI LQ  L H+W++ VP+PP
Sbjct:  126 RREIDIMRHLYHRNVVLLFEVLESADTY---DDDSHICMVLELMERGPTMVCGAD-GTF----------------VAERGEAG-VWPEAAAQLMFADLVRGMQYLHGRGICHRDIKPDNLMIYENGTLRITDFGCA--VYFPPGPAR------------------DAALLRDTAGAYTFLAPECINLKADPYCGYGADIWSAGVTLYTWIFGEVPFYSDSPEPLYEAIRNDPVELGEALSADLLDLLARLLDKDPRSRITLQQCLSHAWLKDVPEPP 361          
BLAST of mRNA_S-dermatodea_contig1132.853.1 vs. uniprot
Match: H3GBR4_PHYRM (Protein kinase domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GBR4_PHYRM)

HSP 1 Score: 155 bits (392), Expect = 6.490e-41
Identity = 105/288 (36.46%), Postives = 140/288 (48.61%), Query Frame = 3
Query:   12 EIEVMRHLYHRSVVLLFEVLEEREEWEAGDGEGRVCMVQEYMEGGPTMTFDDDTGLFKRPGASRCGGSGGAGDAGERRSVGDAYSEDEAKPLFRDLLQGLLYLHEEGVVHRDIKPDNLLLFENGTLRICDFGCAQHVKIARRPNKHDSNEGAGGDGGGQETEEDEEGLTNSVGTYAFHCPESVTGDGVPYSGRAADAWAAACTLYCWTFACLPFHHESLEQLFEKIRNGEL------DVGQAI--SPELAALLKGMLEKDPAGRIGLQAALEHSWMQGVPDPPPPAGF 851
            EIE+MR LYHR++VLLFEV+E        D   +V MV EYM  GP M +  DT  F                    R+ G   SE+ A+    D+  GL YLH+ G+ HRDIKPDN+LL   G   I DFGCA+                    G G  T E    ++++VGTY F  PE  +G+G  Y     D WA    L+ + F  LPF  ES  +LF++I   ++      + G+ +  SPE+  LL+ +L+KDP  RI +  AL H W  G  D   P  F
Sbjct:  151 EIEIMRSLYHRNIVLLFEVIE-------ADDSDKVYMVLEYMACGPCMVYRPDTKDFYS------------------RATGGTLSEELARSYLSDIFFGLQYLHQRGICHRDIKPDNVLLNGTGRCHITDFGCAKAF------------------GNGSYTNESAR-VSDTVGTYQFLAPECCSGEG--YDPFKVDIWAVGVVLFIFLFGRLPFASESTRELFDEIIRAQIVLPTLEESGRELPFSPEVQDLLRRLLQKDPEQRITIVQALGHPWF-GQDDEEEPLSF 391          
BLAST of mRNA_S-dermatodea_contig1132.853.1 vs. uniprot
Match: A0A6G0XB43_9STRA (Protein kinase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XB43_9STRA)

HSP 1 Score: 139 bits (351), Expect = 1.340e-35
Identity = 89/271 (32.84%), Postives = 130/271 (47.97%), Query Frame = 3
Query:   12 EIEVMRHLYHRSVVLLFEVLEEREEWEAGDGEGRVCMVQEYMEGGPTMTFDDDTGLFKRPGASRCGGSGGAGDAGERRSVGDAYSEDEAKPLFRDLLQGLLYLHEEGVVHRDIKPDNLLLFENGTLRICDFGCAQHVKIARRPNKHDSNEGAGGDGGGQETEEDEEGLTNSVGTYAFHCPESVTGDGVPYSGRAADAWAAACTLYCWTFACLPFHHESLEQLFEKIRNGELDVGQ---AISPELAALLKGMLEKDPAGRIGLQAALEHSWM 815
            EI +MR LYHR+VVLLFEV+ +           ++ ++ EY+  GP M +D DT +FK P                    G    E+ AK   RD++QG+ YLH  G+ HRDIKPDN+LL ++    + DFGCAQ ++ + R                         LT++VGTY F  PE  +G+  P++    D WA   TLY + +  LPF   + +QLF+ I    ++      +IS      L+  L KDP+ R  +     H W+
Sbjct:   89 EINIMRTLYHRNVVLLFEVIND-------PSSDKIYLILEYLPKGPCMLYDADTKVFKSP------------------ITGTTLPEELAKKHIRDIVQGVKYLHNRGICHRDIKPDNILLNDDNRCHLSDFGCAQVLEPSAR-------------------------LTSTVGTYQFLAPECCSGE--PFNPFRVDIWAIGVTLYIFLYGVLPFDAPNTKQLFDDILVKSIEYPSTTTSISVLGMDFLQSALCKDPSERPTIANMELHPWL 307          
BLAST of mRNA_S-dermatodea_contig1132.853.1 vs. uniprot
Match: A0A2I0XAW7_9ASPA (Serine/threonine-protein kinase GRIK1 n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0XAW7_9ASPA)

HSP 1 Score: 137 bits (345), Expect = 6.440e-35
Identity = 91/281 (32.38%), Postives = 135/281 (48.04%), Query Frame = 3
Query:    9 QEIEVMRHLYHRSVVLLFEVLEEREEWEAGDGEGRVCMVQEYMEGGPTMTFDDDTGLFKRPGASRCGGSGGAGDAGERRSVGDAYSEDEAKPLFRDLLQGLLYLHEEGVVHRDIKPDNLLLFENGTLRICDFGCAQHVKIARRPNKHDSNEGAGGDGGGQETEEDEEGLTNSVGTYAFHCPESVTGDGVPYSGRAADAWAAACTLYCWTFACLPFHHESLEQLFEKIRNGELDVGQAISPELAALLKGMLEKDPAGRIGLQAALEHSWMQGVPDP-PPPAG 848
            +E+ +M+ L H +++ L EV+++ +         R  MV EY+EG       D +G        +CGG G                E+ ++   RD++ GL YLH  GV+H DIKP+NLL+ + G ++I DF  +   + A                           L  S GT  F  PE   G  + Y G+ AD WA   TLYC  F   PF  ESL++ ++KI N  L + + + PEL  LL+G+L KDP+ R+ L++A  H W+    DP P P+G
Sbjct:   58 REVSIMKTLEHPNIINLIEVIDDPDS-------DRFFMVLEYVEG---KCICDASG--------QCGGIG----------------EEISRRRLRDIISGLSYLHAHGVIHGDIKPENLLVTKGGAVKIGDFSISHAFEDANDL------------------------LWRSPGTPVFTAPECCIG--LNYHGKTADVWAVGVTLYCMIFGYCPFIGESLQETYDKIVNSPLHISEDLDPELEELLRGLLCKDPSQRMTLESAARHPWLTRGTDPIPQPSG 278          
BLAST of mRNA_S-dermatodea_contig1132.853.1 vs. uniprot
Match: A0A6A5TDJ1_9PLEO (Pkinase-domain-containing protein n=1 Tax=Clathrospora elynae TaxID=706981 RepID=A0A6A5TDJ1_9PLEO)

HSP 1 Score: 142 bits (358), Expect = 2.150e-34
Identity = 91/270 (33.70%), Postives = 129/270 (47.78%), Query Frame = 3
Query:    6 RQEIEVMRHLYHRSVVLLFEVLEEREEWEAGDGEGRVCMVQEYMEGGPTMTFDDDTGLFKRPGASRCGGSGGAGDAGERRSVGDAYSEDEAKPLFRDLLQGLLYLHEEGVVHRDIKPDNLLLFENGTLRICDFGCAQHVKIARRPNKHDSNEGAGGDGGGQETEEDEEGLTNSVGTYAFHCPESVTGDGVPYSGRAADAWAAACTLYCWTFACLPFHHESLEQLFEKIRNGELDVGQAISPELAALLKGMLEKDPAGRIGLQAALEHSWM 815
            ++EI +M+ L+H ++V L EVL++ EE         + MV E  + G  M      GL +R                      D YSE++ +  FRD+L GL YLH +G++HRDIKPDN L+ E   L+I DFG ++                          +E E     S G+ AF  PE         SGRAAD W+  CTLYC  F  +PF    + +L+E IR+  L+     S EL  LL+ ++EKDP  RI ++   EH W+
Sbjct:  173 KEEIAIMKKLHHPNLVTLIEVLDDPEE-------DSLYMVMEMCKKGVVMQI----GLEERA---------------------DPYSEEQCRCWFRDMLLGLEYLHAQGIIHRDIKPDNCLITEEDVLKIVDFGVSEMFD-----------------------KEGEMKTAKSAGSPAFMPPELCVAKHGQVSGRAADIWSMGCTLYCLLFGRIPFERHGMIELYESIRSDPLEFESECSAELKELLQRLMEKDPKKRITMEEIREHPWV 387          
BLAST of mRNA_S-dermatodea_contig1132.853.1 vs. uniprot
Match: UPI001B38274F (Pkinase-domain-containing protein n=1 Tax=Cucurbitaria berberidis CBS 394.84 TaxID=1168544 RepID=UPI001B38274F)

HSP 1 Score: 140 bits (354), Expect = 7.430e-34
Identity = 91/270 (33.70%), Postives = 127/270 (47.04%), Query Frame = 3
Query:    6 RQEIEVMRHLYHRSVVLLFEVLEEREEWEAGDGEGRVCMVQEYMEGGPTMTFDDDTGLFKRPGASRCGGSGGAGDAGERRSVGDAYSEDEAKPLFRDLLQGLLYLHEEGVVHRDIKPDNLLLFENGTLRICDFGCAQHVKIARRPNKHDSNEGAGGDGGGQETEEDEEGLTNSVGTYAFHCPESVTGDGVPYSGRAADAWAAACTLYCWTFACLPFHHESLEQLFEKIRNGELDVGQAISPELAALLKGMLEKDPAGRIGLQAALEHSWM 815
            ++EI +M+ L H ++V L EVL++ EE         + MV E  + G  M      GL +R                      D YSE+  +  FRD++ GL YLH +G++HRDIKPDN L+ E   L+I DFG ++                          +E E     S G+ AF  PE         SGRAAD W+  CTLYC  F  +PF    + +L+E IRN  ++     +PEL  LL  +LEKDP  RI ++   EH W+
Sbjct:  176 KEEIAIMKKLNHPNLVTLIEVLDDPEE-------DSLYMVMEMCKKGVVM----QVGLEERA---------------------DPYSEEHCRCWFRDMILGLEYLHAQGIIHRDIKPDNCLINEEDVLKIVDFGVSEMFD-----------------------KEGEMKTAKSAGSPAFMPPELCVAKHGHVSGRAADIWSMGCTLYCLLFGRIPFEQHGMIELYESIRNDPIEFESECNPELKELLCRLLEKDPMKRITMEEIREHPWV 390          
BLAST of mRNA_S-dermatodea_contig1132.853.1 vs. uniprot
Match: A0A8E2F959_9PEZI (Pkinase-domain-containing protein n=1 Tax=Glonium stellatum TaxID=574774 RepID=A0A8E2F959_9PEZI)

HSP 1 Score: 137 bits (345), Expect = 1.080e-33
Identity = 89/270 (32.96%), Postives = 128/270 (47.41%), Query Frame = 3
Query:    6 RQEIEVMRHLYHRSVVLLFEVLEEREEWEAGDGEGRVCMVQEYMEGGPTMTFDDDTGLFKRPGASRCGGSGGAGDAGERRSVGDAYSEDEAKPLFRDLLQGLLYLHEEGVVHRDIKPDNLLLFENGTLRICDFGCAQHVKIARRPNKHDSNEGAGGDGGGQETEEDEEGLTNSVGTYAFHCPESVTGDGVPYSGRAADAWAAACTLYCWTFACLPFHHESLEQLFEKIRNGELDVGQAISPELAALLKGMLEKDPAGRIGLQAALEHSWM 815
            ++EI +M+ L H +VV L EVL++ EE         + MV E  + G  M      GL +R                      D Y E++ +  FRD++ GL YLH +G++HRDIKPDN L+ ++  L+I DFG ++  +                       +E E     S G+ AF  PE         SGRAAD W+   TLYC  F  +PF    +  L++ IRN E++VG     +L  LL  +LEKDP  RI ++   EH W+
Sbjct:  177 KEEIAIMKKLNHPNVVSLIEVLDDPEE-------DSLYMVMEMCKKGVVM----QVGLEERA---------------------DPYEEEQCRCWFRDMILGLEYLHAQGIIHRDIKPDNCLITDDDVLKIVDFGVSEMFE-----------------------KESEMQTAKSAGSPAFMPPELCVAKHGQVSGRAADIWSMGVTLYCLRFGRIPFEKTGVLDLYDSIRNDEVEVGSDCDEDLKDLLTRLLEKDPQKRIKMEELREHPWV 391          
BLAST of mRNA_S-dermatodea_contig1132.853.1 vs. uniprot
Match: A0A8J2IPT6_9PLEO (Hypothetical protein n=1 Tax=Alternaria atra TaxID=119953 RepID=A0A8J2IPT6_9PLEO)

HSP 1 Score: 140 bits (352), Expect = 1.330e-33
Identity = 89/270 (32.96%), Postives = 129/270 (47.78%), Query Frame = 3
Query:    6 RQEIEVMRHLYHRSVVLLFEVLEEREEWEAGDGEGRVCMVQEYMEGGPTMTFDDDTGLFKRPGASRCGGSGGAGDAGERRSVGDAYSEDEAKPLFRDLLQGLLYLHEEGVVHRDIKPDNLLLFENGTLRICDFGCAQHVKIARRPNKHDSNEGAGGDGGGQETEEDEEGLTNSVGTYAFHCPESVTGDGVPYSGRAADAWAAACTLYCWTFACLPFHHESLEQLFEKIRNGELDVGQAISPELAALLKGMLEKDPAGRIGLQAALEHSWM 815
            ++EI +M+ L+H ++V L EVL++ EE         + MV E  + G  M      GL +R                      D YSE++ +  FRD++ GL YLH +G++HRDIKPDN L+ E   L+I DFG ++                          +E E     S G+ AF  PE         SGRAAD W+  CTLYC  F  +PF    + +L++ IR   L+     +PEL  LL+ ++EKDP  RI ++   EH W+
Sbjct:  151 KEEIAIMKKLHHPNLVTLIEVLDDPEE-------DSLYMVMEMCKKGVVM----QVGLEERA---------------------DPYSEEQCRCWFRDMILGLEYLHAQGIIHRDIKPDNCLITEEDVLKIVDFGVSEMFD-----------------------KEGEMKTAKSAGSPAFMPPELCVAKHGHVSGRAADIWSMGCTLYCLLFGRIPFEKHGMIELYQSIRTDPLEFEGECNPELKDLLQRLMEKDPKKRITMEEIREHPWV 365          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1132.853.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZ94_9PHAE6.670e-13466.24Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LHH8_ECTSI2.520e-13266.03Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A836CED4_9STRA3.270e-6142.60Kinase-like domain-containing protein n=1 Tax=Trib... [more]
H3GBR4_PHYRM6.490e-4136.46Protein kinase domain-containing protein n=1 Tax=P... [more]
A0A6G0XB43_9STRA1.340e-3532.84Protein kinase domain-containing protein n=1 Tax=A... [more]
A0A2I0XAW7_9ASPA6.440e-3532.38Serine/threonine-protein kinase GRIK1 n=2 Tax=Dend... [more]
A0A6A5TDJ1_9PLEO2.150e-3433.70Pkinase-domain-containing protein n=1 Tax=Clathros... [more]
UPI001B38274F7.430e-3433.70Pkinase-domain-containing protein n=1 Tax=Cucurbit... [more]
A0A8E2F959_9PEZI1.080e-3332.96Pkinase-domain-containing protein n=1 Tax=Glonium ... [more]
A0A8J2IPT6_9PLEO1.330e-3332.96Hypothetical protein n=1 Tax=Alternaria atra TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1132contigS-dermatodea_contig1132:1890..5045 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score394.0
Seed ortholog evalue5.8e-107
Seed eggNOG ortholog2880.D8LHH8
KEGG koko:K07298,ko:K07359
KEGG Pathwayko04068,ko04140,ko04150,ko04151,ko04152,ko04211,ko04530,ko04920,ko04921,ko05034,map04068,map04140,map04150,map04151,map04152,map04211,map04530,map04920,map04921,map05034
EggNOG free text desc.peptidyl-threonine phosphorylation
EggNOG OGsKOG0585@1,KOG0585@2759
EC2.7.11.1,2.7.11.17
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein kinase-like domain
Ec32 orthologEc-11_004020.1
Exons2
Model size901
Cds size864
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1132.853.1prot_S-dermatodea_contig1132.853.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig1132 1892..5010 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924197.2612994-UTR-S-dermatodea_contig1132:1889..18911622924197.2612994-UTR-S-dermatodea_contig1132:1889..1891Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1132 1890..1891 +
1694079085.3083022-UTR-S-dermatodea_contig1132:1889..18911694079085.3083022-UTR-S-dermatodea_contig1132:1889..1891Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1132 1890..1891 +
1622924197.293314-UTR-S-dermatodea_contig1132:5010..50451622924197.293314-UTR-S-dermatodea_contig1132:5010..5045Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1132 5011..5045 +
1694079085.3372402-UTR-S-dermatodea_contig1132:5010..50451694079085.3372402-UTR-S-dermatodea_contig1132:5010..5045Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1132 5011..5045 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924197.2738397-CDS-S-dermatodea_contig1132:1891..22421622924197.2738397-CDS-S-dermatodea_contig1132:1891..2242Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1132 1892..2242 +
1694079085.319449-CDS-S-dermatodea_contig1132:1891..22421694079085.319449-CDS-S-dermatodea_contig1132:1891..2242Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1132 1892..2242 +
1622924197.2836497-CDS-S-dermatodea_contig1132:4497..50101622924197.2836497-CDS-S-dermatodea_contig1132:4497..5010Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1132 4498..5010 +
1694079085.327573-CDS-S-dermatodea_contig1132:4497..50101694079085.327573-CDS-S-dermatodea_contig1132:4497..5010Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1132 4498..5010 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig1132.853.1

>prot_S-dermatodea_contig1132.853.1 ID=prot_S-dermatodea_contig1132.853.1|Name=mRNA_S-dermatodea_contig1132.853.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=288bp
MRQEIEVMRHLYHRSVVLLFEVLEEREEWEAGDGEGRVCMVQEYMEGGPT
MTFDDDTGLFKRPGASRCGGSGGAGDAGERRSVGDAYSEDEAKPLFRDLL
QGLLYLHEEGVVHRDIKPDNLLLFENGTLRICDFGCAQHVKIARRPNKHD
SNEGAGGDGGGQETEEDEEGLTNSVGTYAFHCPESVTGDGVPYSGRAADA
WAAACTLYCWTFACLPFHHESLEQLFEKIRNGELDVGQAISPELAALLKG
MLEKDPAGRIGLQAALEHSWMQGVPDPPPPAGFVSDA*
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mRNA from alignment at S-dermatodea_contig1132:1890..5045+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig1132.853.1 ID=mRNA_S-dermatodea_contig1132.853.1|Name=mRNA_S-dermatodea_contig1132.853.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3156bp|location=Sequence derived from alignment at S-dermatodea_contig1132:1890..5045+ (Saccorhiza dermatodea SderLu1190fm monoicous)
AGATGCGCCAAGAAATAGAAGTCATGCGACACCTGTACCACCGCAGTGTG GTGCTCCTGTTCGAGGTGCTGGAGGAGCGAGAAGAATGGGAAGCCGGCGA CGGCGAGGGGCGCGTGTGCATGGTCCAAGAGTATATGGAAGGCGGCCCGA CCATGACGTTTGACGACGATACGGGGTTGTTCAAGCGCCCCGGCGCTAGC AGATGCGGTGGCTCTGGCGGTGCAGGCGACGCAGGCGAAAGGAGAAGTGT GGGGGACGCCTACTCGGAGGACGAAGCTAAGCCGCTATTCCGCGACTTGC TGCAAGGCCTGCTGTACCTGCACGAGGAAGGGGTTGTGCACCGCGACATC AAGGTATGTGCGTGGCGTGGGAAGGGTCTCGGGGTTTTATGCGTTAATTC TATTTTATGTGGTATAATAGCGTTGTTCCAAATAGCATCCATCGATCAAT TTCAGTGTGATTTGTGTATCTTGCAGTGTGGTGCTAAAAAGGAAATTTTA CGGTATTTTTACTGTCATAATATTTTAACTCGATAGAATATGGATATTTT GTTGTGGCATGTTCCTTGAGAGAGGTCTCGCTCTCGATGGTTTCCTTTGG CCCACTCAGCCTTGGCGAAAATATCGTGCTACGCTTTTGCACAATTGGTG CAACAATATCGTTTCCAGCAGGGCAATTAATTTTCCCCCTCCCGACACCT GTCCCCAACTACTAGGTCAAAACGCTGCAGCGCCACGTGCTTAGGTTAGG CGTCACGATGTCACGCTGGTATTATAGTATGATGATCTTTCAGGCCGTTC AGATGTTGCCGAGCTTGATCGTGCTCTGCTTCTAGGGCGCTTATCCTTCC CTTCAGAACTACAGCGGGGAGTTTCATCGGGAAAATAGTATAAATGCTGG TACACACTTTTATCGACACGATAGTCTTTTCCGCTGAAAAACGCTGCGTG CGGACGGACCGCCGTGACCCGCACCGTGCTGTGCGCCCATGACAGCTGCA TTTTGGACAGCTGCATTTGTTTCCCGCACGCCTTCTTGTAGATATATAGG CGCACGCCGAGCGATTGTGGTGTTGATCGCAATTCCCATGGGCTTAAAAT ATTGCACGCGGACCCCGATACAGTATATACATACAAAGTATACAATACCC GGGGCTGCGTCTCACCGATTGTATTATTTTCCACGCATTAGATCGATTGG CCTGCAACCCCGTTGCTGGTATCTCTATGATGTCACCAGACCCCTACAGA CGGAAGCCTCGGCTCTTTAGGAATCGTGGACCGAGATCCCTCGCTTGCAA CCGGACACAACGTCTCGAGCTTCCCCCAGACATTTCACCGGTCGCCAAAT ATTCGGATACCTTCCCTGTCCGATGAATACGTGTATTAATAGTTCAGGTA GGCCCTTGGTGATTGCTGCGGCCGGGTTTCGGGCAAGTTTGGCGGCTCAT CCTCTGGTTTCTTTGGGCCGCCTTCAAAAAGGGCCTCACAGCATTGTGGC TGCTGTAAACTTATGTATCATGCACCATTTACGTATGACGGGGGTTCCGG TTTCAAAACTATTCGAGGGCCGTCTCAGTTTTTCCCGCCCATCGGTCGAC AGCCGATTACTGTACCTCCTTTAGGAAGGTTGGATTCAGCTCAGACCTTG CCCACGTATCGTACGGCTTTCCCCTGGTACGGGGTGCAAGTGCACACCAA TGGTATGATTATGTATCGCGACGAGCATACTGTAGCATAAGGGGAGCACT GTTTCAACAGGACGTACGATACTGCGTCGGACTCTGCGGAAAACTGTCCA AAAATTGAGAGACGATTTGAGTTAATATAGTAGATGGGCTGACCCGCTAC GTCCTCATCGTGAGATGCCGCGATCAGTAGTTGTCGTAGCCGTGGCGACT CCTGGCCTCGGATTAGTACTCCAAAGATACAGTAGAGGGGGTAAGATAAT GTTAGAAGGCGTTTTTTATCTGCCGCGCGGGAGTTAGAAGGCGTTTTTTC ATTTTGCCGTGCTCGCGCCTGATTGGCCATCCCATCTCAGATAATGGTCC GATTTTACCAGGTTAAAGAAACGAATATGTTCCAGGATTGCAACAGTATT ATTGTGTTATTGTATCATTGTGGCCGACCGGCCGGCCGACCCCCGAAGAC GACAGCAAAGCTTAAATAAACACAGAAGTACTATTATATAGCGTTGGGGT CCAATCTTTTTGGTAGAGGAAAAAGATGGCCCAATCTAACTCCTATAACT CAGTGGAAGGAAGCCTACGTTATACGAAGTAAATATATTGCTATGGGGTG ATGTTGTAGTACCATCGTACGTACTGTATACAGCAGTGTTCACCCCCCCT CCCCCTCTCTTTGGATTGCTCGCATGGCGGTATTTTTCATTAGTCCCGGC AAACCTCAGTCCAATCAAACATATCACGTGCCTCCATCAGCCATGTTTTC GTCCTGTCTGTGATGCTCGGAGCGCTGAGGCTTGAAATACTTGTGTGCTT TCTTCGCCGCCTCTCACACTCACCCGTATCGTGTCGTTTGCACGCCTTTC TCCGACCTCACCCGTTCTCAAAAATGTTGAAAAACAAAAAAACACACATC CGATTCAGCCGGACAACCTCCTGCTCTTCGAGAATGGCACCCTACGAATC TGCGATTTCGGATGCGCCCAGCACGTCAAAATCGCCCGTCGCCCGAACAA ACACGACAGCAATGAAGGGGCTGGCGGAGACGGCGGAGGGCAAGAGACGG AGGAGGATGAGGAAGGGCTGACGAATTCGGTGGGAACCTACGCGTTTCAC TGCCCGGAAAGCGTCACGGGAGACGGCGTTCCGTACTCAGGGCGCGCGGC GGACGCCTGGGCGGCGGCGTGCACCCTCTACTGCTGGACGTTCGCCTGCC TGCCGTTTCACCATGAGTCACTAGAGCAGCTCTTCGAGAAGATCAGGAAC GGGGAGTTGGACGTTGGGCAGGCGATCTCGCCCGAGCTCGCAGCCCTTCT GAAGGGCATGTTGGAAAAGGACCCCGCCGGGCGTATCGGCCTGCAGGCCG CCCTCGAGCACTCTTGGATGCAGGGGGTACCAGACCCCCCCCCGCCAGCT GGGTTTGTTTCGGACGCGTAGATTATAGGTGATTATTTGTGGAGGTTGGG GGGGGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig1132:1890..5045+

>mRNA_S-dermatodea_contig1132.853.1 ID=mRNA_S-dermatodea_contig1132.853.1|Name=mRNA_S-dermatodea_contig1132.853.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1728bp|location=Sequence derived from alignment at S-dermatodea_contig1132:1890..5045+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCGCCAAGAAATAGAAGTCATGCGACACCTGTACCACCGCAGTGTGGT
GCTCCTGTTCGAGGTGCTGGAGGAGCGAGAAGAATGGGAAGCCGGCGACG
GCGAGGGGCGCGTGTGCATGGTCCAAGAGTATATGGAAGGCGGCCCGACC
ATGACGTTTGACGACGATACGGGGTTGTTCAAGCGCCCCGGCGCTAGCAG
ATGCGGTGGCTCTGGCGGTGCAGGCGACGCAGGCGAAAGGAGAAGTGTGG
GGGACGCCTACTCGGAGGACGAAGCTAAGCCGCTATTCCGCGACTTGCTG
CAAGGCCTGCTGTACCTGCACGAGGAAGGGGTTGTGCACCGCGACATCAA
GATGCGCCAAGAAATAGAAGTCATGCGACACCTGTACCACCGCAGTGTGG
TGCTCCTGTTCGAGGTGCTGGAGGAGCGAGAAGAATGGGAAGCCGGCGAC
GGCGAGGGGCGCGTGTGCATGGTCCAAGAGTATATGGAAGGCGGCCCGAC
CATGACGTTTGACGACGATACGGGGTTGTTCAAGCGCCCCGGCGCTAGCA
GATGCGGTGGCTCTGGCGGTGCAGGCGACGCAGGCGAAAGGAGAAGTGTG
GGGGACGCCTACTCGGAGGACGAAGCTAAGCCGCTATTCCGCGACTTGCT
GCAAGGCCTGCTGTACCTGCACGAGGAAGGGGTTGTGCACCGCGACATCA
AGCCGGACAACCTCCTGCTCTTCGAGAATGGCACCCTACGAATCTGCGAT
TTCGGATGCGCCCAGCACGTCAAAATCGCCCGTCGCCCGAACAAACACGA
CAGCAATGAAGGGGCTGGCGGAGACGGCGGAGGGCAAGAGACGGAGGAGG
ATGAGGAAGGGCTGACGAATTCGGTGGGAACCTACGCGTTTCACTGCCCG
GAAAGCGTCACGGGAGACGGCGTTCCGTACTCAGGGCGCGCGGCGGACGC
CTGGGCGGCGGCGTGCACCCTCTACTGCTGGACGTTCGCCTGCCTGCCGT
TTCACCATGAGTCACTAGAGCAGCTCTTCGAGAAGATCAGGAACGGGGAG
TTGGACGTTGGGCAGGCGATCTCGCCCGAGCTCGCAGCCCTTCTGAAGGG
CATGTTGGAAAAGGACCCCGCCGGGCGTATCGGCCTGCAGGCCGCCCTCG
AGCACTCTTGGATGCAGGGGGTACCAGACCCCCCCCCGCCAGCTGGGTTT
GTTTCGGACGCGTAGCCGGACAACCTCCTGCTCTTCGAGAATGGCACCCT
ACGAATCTGCGATTTCGGATGCGCCCAGCACGTCAAAATCGCCCGTCGCC
CGAACAAACACGACAGCAATGAAGGGGCTGGCGGAGACGGCGGAGGGCAA
GAGACGGAGGAGGATGAGGAAGGGCTGACGAATTCGGTGGGAACCTACGC
GTTTCACTGCCCGGAAAGCGTCACGGGAGACGGCGTTCCGTACTCAGGGC
GCGCGGCGGACGCCTGGGCGGCGGCGTGCACCCTCTACTGCTGGACGTTC
GCCTGCCTGCCGTTTCACCATGAGTCACTAGAGCAGCTCTTCGAGAAGAT
CAGGAACGGGGAGTTGGACGTTGGGCAGGCGATCTCGCCCGAGCTCGCAG
CCCTTCTGAAGGGCATGTTGGAAAAGGACCCCGCCGGGCGTATCGGCCTG
CAGGCCGCCCTCGAGCACTCTTGGATGCAGGGGGTACCAGACCCCCCCCC
GCCAGCTGGGTTTGTTTCGGACGCGTAG
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