mRNA_S-dermatodea_contig11313.850.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11313.850.1
Unique NamemRNA_S-dermatodea_contig11313.850.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig11313.850.1 vs. uniprot
Match: A0A6H5KL44_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL44_9PHAE)

HSP 1 Score: 240 bits (613), Expect = 2.380e-74
Identity = 113/152 (74.34%), Postives = 127/152 (83.55%), Query Frame = 2 
Query:    2 EHGFLMNVDTKWRTHPDVSTVPVEQWHGHPSVAELYCLAICHKRGIRTLRDLRASHIPMLKEIYQRGVQTIGEVYGVAEDQLRVFVHYMPQFYHFHVHFTR---LNNTIGVEVERAHLLQDVVQNLEQDDEFYLKRTIQFRLRTTDALLGAF 448
            EHGFL+N+DTKWRTHPD+ST P  +W GHPSV ELYCLAI H+RGIRTLRDLRA H+PMLKEIY RGV+TI  VYGV EDQLRVFVHYMPQF+HFHVHFTR   L+NTIGVE ERAHLL D++QNLE+D  FY  RT+QF +R  DAL  AF
Sbjct:  210 EHGFLLNIDTKWRTHPDISTTPRHEWEGHPSVGELYCLAISHQRGIRTLRDLRAKHVPMLKEIYGRGVETIEAVYGVPEDQLRVFVHYMPQFFHFHVHFTRRVVLHNTIGVEAERAHLLVDIIQNLERDSYFYETRTMQFGVRENDALHTAF 361
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BLAST of mRNA_S-dermatodea_contig11313.850.1 vs. uniprot
Match: A0A7S2XNU1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNU1_9STRA)

HSP 1 Score: 197 bits (502), Expect = 5.480e-58
Identity = 85/142 (59.86%), Postives = 107/142 (75.35%), Query Frame = 2 
Query:   11 FLMNVDTKWRTHPDVSTVPVEQWHGHPSVAELYCLAICHKRGIRTLRDLRASHIPMLKEIYQRGVQTIGEVYGVAEDQLRVFVHYMPQFYHFHVHFTRLNNTIGVEVERAHLLQDVVQNLEQDDEFYLKRTIQFRLRTTDAL 436
            F++NVDTKWR+HPD  + P  +W+ HP+ A+LYCL I  + G+RTLRDLR  H+PMLK + Q G + I  +YG+  +Q+RVFVHY PQFYHFHVHFTRL N +G  VER HL+ D+VQNL  D ++Y KRTI FRLRTTD L
Sbjct:  181 FVLNVDTKWRSHPDALSTPRSEWYQHPATADLYCLGIVKQSGLRTLRDLRGEHVPMLKAMMQEGTKAIQTIYGIESNQIRVFVHYQPQFYHFHVHFTRLENEVGCSVERGHLVSDIVQNLGMDSDYYKKRTISFRLRTTDTL 322
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BLAST of mRNA_S-dermatodea_contig11313.850.1 vs. uniprot
Match: K8EMC5_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EMC5_9CHLO)

HSP 1 Score: 186 bits (473), Expect = 1.610e-53
Identity = 81/149 (54.36%), Postives = 106/149 (71.14%), Query Frame = 2 
Query:    8 GFLMNVDTKWRTHPDVSTVPVEQWHGHPSVAELYCLAICHKRGIRTLRDLRASHIPMLKEIYQRGVQTIGEVYGVAEDQLRVFVHYMPQFYHFHVHFTRLNNTIGVEVERAHLLQDVVQNLEQDDEFYLKRTIQFRLRTTDALLGAFTQ 454
            GFL+N D KW THPD  T P EQW  HPS  ELYCL +CH++ +R+LRDLRA+H+PML+ + ++G + I   YG+A + LR+FVHY PQFYHFHVHFT ++   GV  ERAHLL DV++N+E+D E Y KR+I  R+   D L   F +
Sbjct:  192 GFLLNTDPKWTTHPDPKTTPKEQWMNHPSTRELYCLGLCHRKDVRSLRDLRAAHLPMLRAMAKKGREVIKNTYGLANESLRIFVHYPPQFYHFHVHFTNVSVEHGVSAERAHLLDDVIENIERDSEHYAKRSITCRMGENDELWRRFKE 340
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BLAST of mRNA_S-dermatodea_contig11313.850.1 vs. uniprot
Match: A0A0M0JXI4_9EUKA (Scavenger mRNA-decapping enzyme n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JXI4_9EUKA)

HSP 1 Score: 184 bits (467), Expect = 3.060e-53
Identity = 84/157 (53.50%), Postives = 111/157 (70.70%), Query Frame = 2 
Query:    2 EHGFLMNVDTKWRTHPDVSTVPVEQ--WHGHPSVAELYCLAICHKRGIRTLRDLRASHIPMLKEIYQRGVQTIGEVYGVAEDQLRVFVHYMPQFYHFHVHFTRLNNTIGVEVERAHLLQDVVQNLEQDDEFYLKRTIQFRLRTTDALLGAFTQEEFA 466
            E GFL+N+DTKW++HP   +    +  W  H SV +LYCLAICH+R +R+LRDLRA H+P+L+ I   G + I  VYGV  D+LRVFVHY PQFYHFHVHFTRL+N +G +VERAHLL  ++  LE D + Y K+T+ ++L+  D LL A    +FA
Sbjct:  141 ERGFLLNIDTKWKSHPPCVSDEFARVAWRCHASVQDLYCLAICHRRDLRSLRDLRARHLPLLRHILHEGCRVIEAVYGVPVDELRVFVHYQPQFYHFHVHFTRLHNDLGCQVERAHLLPQIIAELEADGDAYAKKTLWYQLKANDKLLEAIRAADFA 297
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BLAST of mRNA_S-dermatodea_contig11313.850.1 vs. uniprot
Match: C1MPA0_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MPA0_MICPC)

HSP 1 Score: 182 bits (462), Expect = 4.290e-52
Identity = 80/154 (51.95%), Postives = 107/154 (69.48%), Query Frame = 2 
Query:    8 GFLMNVDTKWRTHPDVSTVPVEQWHGHPSVAELYCLAICHKRGIRTLRDLRASHIPMLKEIYQRGVQTIGEVYGVAEDQLRVFVHYMPQFYHFHVHFTRLNNTIGVEVERAHLLQDVVQNLEQDDEFYLKRTIQFRLRTTDALLGAFTQEEFAG 469
            GFL+N D KW THPD    P EQW  HP   ELYCL +CH++ +R+LRDLRA+H+PML+ + ++G + I   YG+A++ LR+FVHY PQFYHFHVHFT ++   GV  ERAHLL DV++N+E+D E Y K +I  R+   D L   F + + AG
Sbjct:  182 GFLVNTDPKWVTHPDPKATPKEQWMNHPGTRELYCLGLCHRKDVRSLRDLRAAHLPMLRAMARKGREVIKNTYGLADESLRIFVHYPPQFYHFHVHFTNVSVDHGVSAERAHLLDDVIENIERDSEHYAKCSITCRMGENDELWRRFKELDKAG 335
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BLAST of mRNA_S-dermatodea_contig11313.850.1 vs. uniprot
Match: A0A7S3SDN6_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SDN6_EMIHU)

HSP 1 Score: 182 bits (463), Expect = 9.760e-52
Identity = 84/153 (54.90%), Postives = 110/153 (71.90%), Query Frame = 2 
Query:    8 GFLMNVDTKWRTHPDVSTVPV--EQWHGHPSVAELYCLAICHKRGIRTLRDLRASHIPMLKEIYQRGVQTIGEVYGVAEDQLRVFVHYMPQFYHFHVHFTRLNNTIGVEVERAHLLQDVVQNLEQDDEFYL-KRTIQFRLRTTDALLGAFTQE 457
            GFL+NVDTKW++HP  +  P     W GH +V +LYCLAICH+R IR+LRDL A H+P+L+ I  +GV+T+ E YGV    LRVFVHY PQFYHFHVHFTRL+N +G + ERAHLLQ+V+ +LE D   Y  K+T+ ++L+  D LL    +E
Sbjct:  196 GFLLNVDTKWKSHPPCTADPQLRASWRGHTAVKDLYCLAICHRRDIRSLRDLTAEHLPLLRRILDQGVRTLCETYGVEPHDLRVFVHYQPQFYHFHVHFTRLHNDLGCQAERAHLLQEVIDSLEADGACYAQKKTLYYQLKANDRLLARLREE 348
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BLAST of mRNA_S-dermatodea_contig11313.850.1 vs. uniprot
Match: A0A7S0AGM9_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AGM9_9STRA)

HSP 1 Score: 176 bits (446), Expect = 7.710e-51
Identity = 74/142 (52.11%), Postives = 100/142 (70.42%), Query Frame = 2 
Query:   11 FLMNVDTKWRTHPDVSTVPVEQWHGHPSVAELYCLAICHKRGIRTLRDLRASHIPMLKEIYQRGVQTIGEVYGVAEDQLRVFVHYMPQFYHFHVHFTRLNNTIGVEVERAHLLQDVVQNLEQDDEFYLKRTIQFRLRTTDAL 436
            +++N+DTKWR+HPD +T P E+W  H S A+LYCL I    G+  +RDL+  H+P LK +   G+  I   YGV  DQ+R + HY+PQF HFHVH+TRL N IG +VER HL+ D++QNLE D ++Y KRTI ++LR TD L
Sbjct:   80 YIVNIDTKWRSHPDPNTTPREEWLHHSSTADLYCLGIFKADGVACMRDLKVEHVPTLKSMVDEGIAAIERTYGVPRDQIRCYCHYLPQFMHFHVHYTRLENEIGCQVERGHLVSDIIQNLEMDPDYYSKRTITYKLRVTDEL 221
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BLAST of mRNA_S-dermatodea_contig11313.850.1 vs. uniprot
Match: B8C6P1_THAPS (Histidine triad-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C6P1_THAPS)

HSP 1 Score: 172 bits (436), Expect = 2.820e-50
Identity = 78/128 (60.94%), Postives = 96/128 (75.00%), Query Frame = 2 
Query:   35 WRTHPDVSTVPVEQWHGHPSVAELYCLAICHKRGIRTLRDLRASHIPMLKEIYQRGVQTIGEVYGVAEDQLRVFVHYMPQFYHFHVHFTRLNNTIGVEVERAHLLQDVVQNLEQDDEFYLKRTIQFRL 418
            WR+HP    VP ++W  HPSV +LYCLAI   +GI +LRDLR+ HIPMLK + + G++ I  +YGV  DQ+RVFVHY PQFYHFHVHFTRL N +G   ER HLL DV+QNLE DDE+Y KRTI ++L
Sbjct:   44 WRSHPSPLNVPRKEWLNHPSVEDLYCLAITKLKGIASLRDLRSEHIPMLKAMNEEGLRAIKTIYGVESDQIRVFVHYQPQFYHFHVHFTRLQNEVGSSCERGHLLFDVLQNLEMDDEYYSKRTIVYKL 171
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BLAST of mRNA_S-dermatodea_contig11313.850.1 vs. uniprot
Match: A0A6S8T777_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8T777_9STRA)

HSP 1 Score: 179 bits (455), Expect = 1.560e-49
Identity = 83/147 (56.46%), Postives = 105/147 (71.43%), Query Frame = 2 
Query:    2 EHG-FLMNVDTKWRTHPDVSTVPVEQWHGHPSVAELYCLAICHKRGIRTLRDLRASHIPMLKEIYQRGVQTIGEVYGVAEDQLRVFVHYMPQFYHFHVHFTRLNNTIGVEVERAHLLQDVVQNLE-QDDEFYLKRTIQFRLRTTDAL 436
            EH  F++N+DTKWR+HPD +TVP EQW  H S ++LYCL I  + GI TLRDL  +HIP+LK + + G   I ++YGV  DQ+R FVHY PQFYHFHVHFTRL N IG  +ER HL+ D++QNLE  D  FY KRTI ++L+    L
Sbjct:  333 EHDLFVVNIDTKWRSHPDPNTVPREQWLNHESTSDLYCLGIVKQDGIATLRDLTVTHIPLLKTLQEEGFSAIEKIYGVTRDQVRCFVHYQPQFYHFHVHFTRLENEIGSTIERGHLVSDIIQNLEIGDGSFYEKRTITYKLKKASPL 479
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BLAST of mRNA_S-dermatodea_contig11313.850.1 vs. uniprot
Match: A0A1Z5KFD6_FISSO (M7GpppX diphosphatase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFD6_FISSO)

HSP 1 Score: 173 bits (439), Expect = 1.670e-48
Identity = 79/145 (54.48%), Postives = 103/145 (71.03%), Query Frame = 2 
Query:    2 EHGFLMNVDTKWRTHPDVSTVPVEQWHGHPSVAELYCLAICHKRGIRTLRDLRASHIPMLKEIYQRGVQTIGEVYGVAEDQLRVFVHYMPQFYHFHVHFTRLNNTIGVEVERAHLLQDVVQNLEQDDEFYLKRTIQFRLRTTDAL 436
            EH FL+NVDTKWR+HPD  T   E W+ H +V +LYCLAI   + I +LRDLR SH+ MLK + Q   + I + YG++ D +R F HY PQFY  H+HFTR++N IG +VER HL+QDV+QNLE D ++Y KRT+ + LR TD L
Sbjct:  192 EH-FLLNVDTKWRSHPDPKTTSREVWYQHEAVDDLYCLAILKDKSIASLRDLRGSHLAMLKVLIQECPKVIKKTYGISSDMIRCFFHYQPQFYQTHIHFTRIHNEIGAQVERGHLVQDVIQNLEMDPDYYAKRTVTYALRITDPL 335
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11313.850.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KL44_9PHAE2.380e-7474.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XNU1_9STRA5.480e-5859.86Hypothetical protein n=1 Tax=Attheya septentrional... [more]
K8EMC5_9CHLO1.610e-5354.36Uncharacterized protein n=1 Tax=Bathycoccus prasin... [more]
A0A0M0JXI4_9EUKA3.060e-5353.50Scavenger mRNA-decapping enzyme n=1 Tax=Chrysochro... [more]
C1MPA0_MICPC4.290e-5251.95Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A7S3SDN6_EMIHU9.760e-5254.90Hypothetical protein n=2 Tax=Emiliania huxleyi Tax... [more]
A0A7S0AGM9_9STRA7.710e-5152.11Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
B8C6P1_THAPS2.820e-5060.94Histidine triad-like protein (Fragment) n=1 Tax=Th... [more]
A0A6S8T777_9STRA1.560e-4956.46Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A1Z5KFD6_FISSO1.670e-4854.48M7GpppX diphosphatase n=1 Tax=Fistulifera solaris ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11313contigS-dermatodea_contig11313:3291..6723 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score239.6
Seed ortholog evalue9.7e-61
Seed eggNOG ortholog2880.D8LCA8
Preferred nameDCPS
KEGG rclassRC00002
KEGG koko:K01301,ko:K03494,ko:K12584,ko:K12860
KEGG ReactionR04368,R06153
KEGG Pathwayko00601,ko01100,ko03018,ko03040,map00601,map01100,map03018,map03040
KEGG ModuleM00353,M00355
GOsGO:0000288,GO:0000290,GO:0000291,GO:0000339,GO:0000340,GO:0000375,GO:0000377,GO:0000398,GO:0000932,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004779,GO:0004780,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006163,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006725,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0008380,GO:0009056,GO:0009057,GO:0009117,GO:0009150,GO:0009259,GO:0009266,GO:0009267,GO:0009408,GO:0009605,GO:0009628,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010467,GO:0010468,GO:0010604,GO:0010605,GO:0010629,GO:0010941,GO:0016070,GO:0016071,GO:0016462,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016819,GO:0019219,GO:0019222,GO:0019439,GO:0019637,GO:0019693,GO:0030234,GO:0031086,GO:0031323,GO:0031325,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032069,GO:0032075,GO:0032991,GO:0033554,GO:0034641,GO:0034655,GO:0035690,GO:0035770,GO:0036245,GO:0036464,GO:0042221,GO:0042493,GO:0042594,GO:0043067,GO:0043069,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043928,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044692,GO:0045292,GO:0045935,GO:0046483,GO:0046700,GO:0047627,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050072,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051336,GO:0051345,GO:0051716,GO:0055086,GO:0060255,GO:0060548,GO:0060700,GO:0065007,GO:0065009,GO:0070013,GO:0070566,GO:0070887,GO:0071310,GO:0071496,GO:0071704,GO:0072521,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0098772,GO:0140098,GO:1901135,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901575,GO:1901654,GO:1901655,GO:1901700,GO:1901701,GO:1901917,GO:1901919,GO:1905777,GO:1905779,GO:1990904
EggNOG free text desc.m7G(5')pppN diphosphatase activity
EggNOG OGsCOG5075@1,KOG3969@2759
EC2.4.99.4,3.4.17.21,3.6.1.59
COG Functional cat.M
CAZyGT29
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko01003,ko03019,ko03041,ko03400
Hectar predicted targeting categoryother localisation
Exons3
Model size839
Cds size456
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11313.850.1prot_S-dermatodea_contig11313.850.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11313 3658..6707 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924196.9679155-UTR-S-dermatodea_contig11313:3290..36571622924196.9679155-UTR-S-dermatodea_contig11313:3290..3657Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11313 3291..3657 -
1694079085.1408277-UTR-S-dermatodea_contig11313:3290..36571694079085.1408277-UTR-S-dermatodea_contig11313:3290..3657Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11313 3291..3657 -
1622924197.0088687-UTR-S-dermatodea_contig11313:6707..67231622924197.0088687-UTR-S-dermatodea_contig11313:6707..6723Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11313 6708..6723 -
1694079085.1792421-UTR-S-dermatodea_contig11313:6707..67231694079085.1792421-UTR-S-dermatodea_contig11313:6707..6723Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11313 6708..6723 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924196.9764822-CDS-S-dermatodea_contig11313:3657..38261622924196.9764822-CDS-S-dermatodea_contig11313:3657..3826Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11313 3658..3826 -
1694079085.1520514-CDS-S-dermatodea_contig11313:3657..38261694079085.1520514-CDS-S-dermatodea_contig11313:3657..3826Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11313 3658..3826 -
1622924196.9879477-CDS-S-dermatodea_contig11313:5271..53791622924196.9879477-CDS-S-dermatodea_contig11313:5271..5379Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11313 5272..5379 -
1694079085.160591-CDS-S-dermatodea_contig11313:5271..53791694079085.160591-CDS-S-dermatodea_contig11313:5271..5379Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11313 5272..5379 -
1622924196.9979513-CDS-S-dermatodea_contig11313:6528..67071622924196.9979513-CDS-S-dermatodea_contig11313:6528..6707Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11313 6529..6707 -
1694079085.1712725-CDS-S-dermatodea_contig11313:6528..67071694079085.1712725-CDS-S-dermatodea_contig11313:6528..6707Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11313 6529..6707 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11313.850.1

>prot_S-dermatodea_contig11313.850.1 ID=prot_S-dermatodea_contig11313.850.1|Name=mRNA_S-dermatodea_contig11313.850.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=152bp
MNVDTKWRTHPDVSTVPVEQWHGHPSVAELYCLAICHKRGIRTLRDLRAS
HIPMLKEIYQRGVQTIGEVYGVAEDQLRVFVHYMPQFYHFHVHFTRLNNT
IGVEVERAHLLQDVVQNLEQDDEFYLKRTIQFRLRTTDALLGAFTQEEFA
G*
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mRNA from alignment at S-dermatodea_contig11313:3291..6723-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11313.850.1 ID=mRNA_S-dermatodea_contig11313.850.1|Name=mRNA_S-dermatodea_contig11313.850.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3433bp|location=Sequence derived from alignment at S-dermatodea_contig11313:3291..6723- (Saccorhiza dermatodea SderLu1190fm monoicous)
GGAGCACGGCTTCCTGATGAACGTGGACACCAAATGGCGGACGCACCCGG
ACGTCTCGACCGTGCCTGTAGAGCAGTGGCACGGACACCCAAGTGTGGCG
GAGCTGTACTGCCTCGCTATCTGCCACAAGCGAGGCATCCGGACCCTCAG
AGACCTGCGAGCGTCGCACATTCCGATGCTCAAGGAGATATACCAGTGAG
TGAGGTCGGCGAGGAGATCGCTCAGGACAAAGACTCTAGTACAAAAACCA
TATTACATCATGCATGACATGGCGACATACAATACATCATACCAGTACGT
AACAAGTGGCCCTCCATACGTGCACCTTGAGCCCATCTTCCCTCTTGAAA
AGGAATGACCCCAACGCTCGCTCGCTCGCTCGCTCTATGCTAAATTTTCT
GATGTATTTATTTTTAGCGGGGGGGGGGGGGTTCGCTTCGTCGTTAAAGC
TCTCGAGCACATTGTTGCGTGTACGCACGCACGCACGGGCGCGTGTTACG
TTTTCTTCGGGAGGTTTGTTGATAGATGGAGGGCAAGCGGAGATTTTGTT
CAAAAACAAAGCGGTTTTGCTCGGAGGCACAAGTAATATAGCAGGCCGAC
CCTTAGGGAGGGGTCTTTATTGTGGCGGGAATGACATTGTGTGTGTGTGA
AAAGGAGTCCGGCGTTTCAACCCCGTGAAGGAGACGAAGAAGGCGGGCGG
TAATTCTTGCGTAATAGTAATATTTTTAATAATAGTTTGATTGATTGATT
GATTGATTGATTTGCACACGTAGAACATAGTAATAGTAATACTAATACAA
GTAGTATAATACAGTAATATTAATATTAATATTAATATTACGGAGGACGA
TAGCTAACGTTAACAGGTCCAAATTCGCCACAAATCTTAACTTACCAAAA
TAAAACAGGCCGGAACGTTTGGGTATATTATATATTCATGGTCGGTGTTT
GTATCACAAGGGTAGGCCTGTTCTTGACCTCCTGCTGGTTTTTGTTCTTG
AGCTTTTGGTGGTGTTTGGGTGTGAGATTTTGTCCTGGTTACTTGATTAT
AGTGTACCTCCGTAATAAACGACCCAACCCCCTCTATCCGCAGCAGATAG
AGACGTGATAGGAGGCAACAGAAACCCCGGCACTACGAGACCGTGAACAC
TAACAAATAATGTCGGCAGGGTGTTATGATACAACTGTAGAGCTCTATCG
TATGTGGGGCTACTATAAGTACTTGTAGAACATGACTTTTTGTTCTGAAG
ACTTTTCCCGAGAGGCAAAAGTGGCGTGTGCTGTATGAGATAGCCGCGCG
CCGATCCGGTCTCTTGACAAGAGCCCCCTCCTTGCTCCGGCCAGGCGAGG
CGTGCAGACGATAGGCGAGGTGTACGGCGTGGCCGAGGACCAGCTGCGGG
TGTTCGTGCACTACATGCCGCAGTTCTACCACTTCCACGTCCACTTCACC
AGGTGAGCTAAAAACGTTAGAAGGCGGAGATTTGTAGTGTGCGCTGTACA
CGTGTGCAGCCCCCGTGTGCTTTACGAGCATACGACAGCCGTAGTGCACA
GTGAATTCCAATCGTACCTGGTTGTATGATACCGGATTCAAAATACGCGT
GTATTAGGCTGTGTATCTGAGTGTTTACAATACCCCAAATTACACGTATA
CTTGCTCTAAACTACAATCTACGCCGTTGATTGCTTGATTGATTGATTGA
TTGATTGATTGATTGATTGATTGATTGATTATAACAGTTACGACTGCCCG
ACCGGTCCGTCAATGGTTGCCGATCCCGATCGTGGTCAGATCAGAAATCG
AGCGATAAAAAAAAAAATTACGTACTGAATACAGCAGTACTTGACACTTT
GGATCTCTGCGTACAACGAAAGTTTTTTTTCGGCTCGCGGAGCAGGTACA
GGAGAAATAGGGTCTTCGAACCAAGGGCAGGCCCATCCTGCTGTGTCCTG
AGGTTAAGCGTGGAAGGGTTGAATTGCACATGTATAGCCGATCGGCTTAA
TCCGACCCGACTTGTGGTCAGATAAGCAAAGAGTCAAGAAAAACAACTAG
TCAGAACTCTACTTGTACTATACACCGTACCGTCCCTGGTACTTACTTCT
ATGAGGTACAAGGAAGAAAAAATAGCACCCCCCCCGATTTACTTGTAGAA
AAAGTCCTTACTAATTAAAGGAACAATCCACGTTTTTTCATAGCGATTTA
GAGTTGAGGCGACGATACATCTTTTTGAAGCCGGACAAAACGTTCACGGG
CGGCATGATAGCCCGTGGCTACCTGCTATTAATAGTGTATATTGAACGAA
ATATCGACGACCGTAACAGGTGACGAACACACTCGCAATATACAGAGTAC
TCACCCGGTCGGCAGATAGATCCACCTCGCGTATTTGAGAGCACCAACGC
GTGTCCCGTCGTGATGCCGCCTTTTCTCCCCCTTGCGCTATCCCGCTCTC
TCCCTGTCTTGTGGCGCTCCATAGTTAACAGGTCCAAATTTGCCTCAAAT
CTCAACCTAGAAAAATCAAAATAGGCTGGAATCATCGAGATTTCAAGGTC
GATGTTCTTGTGTATGGCCATATCTCGTGTCTTTTTTGTTTTTCGTGCGA
TTTTTGTTGTTTTGGGTATTCATGTTCGGAACATTTGGGTGTTGTTTTCA
TGGTCATGAGATTTGGTCCTGATTACTTGATTATAGTGTACCTCCGTAAT
AAAAACATATACAGAACACGGAGCGAGCGAACGTTGGAGTCCAATATTTT
TGTAGTGGAGAAGACGGCCCAAGCTAAATACTCAGTGGAAGTCTACGTTT
ATGTATGGTACTGTCTGTGGGGTTGTAGAAATGTTACCTCCGCCCTCCCC
TCCCTCTTTGGCCTCCCGGCATGCCTGGGGTCGCTTTGACTTTACAGGCT
GAACAACACCATCGGGGTGGAGGTTGAGCGAGCCCATCTGCTGCAGGATG
TCGTGCAGAACCTGGAGCAGGACGACGAGTTTTACCTCAAGCGCACGATT
CAGTTCCGCCTGAGGACCACCGATGCGCTCCTCGGCGCCTTTACGCAGGA
GGAGTTCGCGGGTTGATTTCAAGAGCCGAGATATTACGTGCAATAAGATT
AATCCCGAGATGAATTAAAACAAAACAAAAATGAACCTTCATCGTCACCA
CCAAGAAACGGGTTTTTCGAGCCAAAAGCACGATATTTTGTTTTTTTACG
GCCCCTGGCAATTCTCGCTTGCGCGGGCGGGCCATGGGCGCCACAGGCCG
CGGGTTTAGGTTTGGGTTTTCGCCCTGCGCCCGGAATTTTTTTGGAAACA
AACAGCGTGTGACAGGTTTGCTCGTTGGGCGCGCGCGCGTACGTGCTTGT
TTCCTCCCCCCCCCTTTTCTCTCCCCGCCAGTGTTATTTGTTTTTTGTCT
CGCCTTTTTTTTTTAACGCAGCTGCTGTTGGGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig11313:3291..6723-

>mRNA_S-dermatodea_contig11313.850.1 ID=mRNA_S-dermatodea_contig11313.850.1|Name=mRNA_S-dermatodea_contig11313.850.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=912bp|location=Sequence derived from alignment at S-dermatodea_contig11313:3291..6723- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAACGTGGACACCAAATGGCGGACGCACCCGGACGTCTCGACCGTGCC
TGTAGAGCAGTGGCACGGACACCCAAGTGTGGCGGAGCTGTACTGCCTCG
CTATCTGCCACAAGCGAGGCATCCGGACCCTCAGAGACCTGCGAGCGTCG
CACATTCCGATGCTCAAGGAGATATACCAATGAACGTGGACACCAAATGG
CGGACGCACCCGGACGTCTCGACCGTGCCTGTAGAGCAGTGGCACGGACA
CCCAAGTGTGGCGGAGCTGTACTGCCTCGCTATCTGCCACAAGCGAGGCA
TCCGGACCCTCAGAGACCTGCGAGCGTCGCACATTCCGATGCTCAAGGAG
ATATACCAGCGAGGCGTGCAGACGATAGGCGAGGTGTACGGCGTGGCCGA
GGACCAGCTGCGGGTGTTCGTGCACTACATGCCGCAGTTCTACCACTTCC
ACGTCCACTTCACCAGGCGAGGCGTGCAGACGATAGGCGAGGTGTACGGC
GTGGCCGAGGACCAGCTGCGGGTGTTCGTGCACTACATGCCGCAGTTCTA
CCACTTCCACGTCCACTTCACCAGGCTGAACAACACCATCGGGGTGGAGG
TTGAGCGAGCCCATCTGCTGCAGGATGTCGTGCAGAACCTGGAGCAGGAC
GACGAGTTTTACCTCAAGCGCACGATTCAGTTCCGCCTGAGGACCACCGA
TGCGCTCCTCGGCGCCTTTACGCAGGAGGAGTTCGCGGGTTGAGCTGAAC
AACACCATCGGGGTGGAGGTTGAGCGAGCCCATCTGCTGCAGGATGTCGT
GCAGAACCTGGAGCAGGACGACGAGTTTTACCTCAAGCGCACGATTCAGT
TCCGCCTGAGGACCACCGATGCGCTCCTCGGCGCCTTTACGCAGGAGGAG
TTCGCGGGTTGA
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