mRNA_S-dermatodea_contig11297.832.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11297.832.1
Unique NamemRNA_S-dermatodea_contig11297.832.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig11297.832.1 vs. uniprot
Match: D7G9F4_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9F4_ECTSI)

HSP 1 Score: 263 bits (671), Expect = 1.160e-79
Identity = 123/139 (88.49%), Postives = 129/139 (92.81%), Query Frame = 1 
Query:    1 KVPDVRFYKQTGDINKIPWSGLFGTGGYIAPEIMSQKPFGKPADLWSVGVMLYQMISGRLPFIPARVCVTKPVSFPATVWADVSVGVKEVICGLLEKDPSQRLTAVQALQHPWIQTIHHLRPSFPHFVPKQGRCNSVGS 417
            KVPDVRFYKQTGDINKIPWSGLFGTGGYIAPEIMSQ+PFGKPADLWSVGVMLYQMISGRLPFIPAR CVTKPVSFPA VWADV+VGVK +I GLLEK+PSQRLTA QALQHPW+QTIHHLRPSFPHFVPK G  +  GS
Sbjct:  823 KVPDVRFYKQTGDINKIPWSGLFGTGGYIAPEIMSQQPFGKPADLWSVGVMLYQMISGRLPFIPARKCVTKPVSFPAAVWADVNVGVKSLIEGLLEKEPSQRLTAAQALQHPWVQTIHHLRPSFPHFVPKPGSMSRSGS 961
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BLAST of mRNA_S-dermatodea_contig11297.832.1 vs. uniprot
Match: A0A835ZDX2_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDX2_9STRA)

HSP 1 Score: 183 bits (464), Expect = 9.440e-51
Identity = 77/129 (59.69%), Postives = 105/129 (81.40%), Query Frame = 1 
Query:    1 KVPDVRFYKQTGDINKIPWSGLFGTGGYIAPEIMSQKPFGKPADLWSVGVMLYQMISGRLPFIPARVCVTKPVSFPATVWADVSVGVKEVICGLLEKDPSQRLTAVQALQHPWIQTIHHLRPSFPHFVP 387
            KVPD++F+K TGD+NKIP+S L GTGG+IAPEIM Q+PFGK AD+WSVGVM+YQM+ GR+PF+PAR C+ +P S+    W +VS   K++I  +LE+DPS+RLTA +AL+HPW++++ +L   FPHFVP
Sbjct:  641 KVPDIKFFKLTGDVNKIPFSTLCGTGGFIAPEIMRQQPFGKAADMWSVGVMIYQMLCGRMPFMPARACLERPPSYLGATWRNVSEEAKDLINKMLERDPSKRLTAAEALEHPWLESVQYLESGFPHFVP 769
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BLAST of mRNA_S-dermatodea_contig11297.832.1 vs. uniprot
Match: A0A7S3XRG1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRG1_HETAK)

HSP 1 Score: 158 bits (399), Expect = 2.550e-44
Identity = 65/127 (51.18%), Postives = 97/127 (76.38%), Query Frame = 1 
Query:    1 KVPDVRFYKQTGDINKIPWSGLFGTGGYIAPEIMSQKPFGKPADLWSVGVMLYQMISGRLPFIPARVCVTKPVSFPATVWADVSVGVKEVICGLLEKDPSQRLTAVQALQHPWIQTIHHLRPSFPHF 381
            KVPDVR++K TGD+NKIP++ L GT  Y+APEI+ ++P+GKPADLWSVGV++Y++++G +PFIP R C  +  +FP  +W   S+   +++  LL  +P +RLT  QALQHPW+ +++HL+ +FPHF
Sbjct:  229 KVPDVRYFKATGDVNKIPFTALTGTEQYMAPEILLKEPYGKPADLWSVGVLMYKLLAGIMPFIPTRACFARKPAFPGYMWDKFSLLAPDMVGKLLTVNPDERLTVAQALQHPWLDSVYHLQVTFPHF 355
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BLAST of mRNA_S-dermatodea_contig11297.832.1 vs. uniprot
Match: A0A6G0XFT2_9STRA (Protein kinase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFT2_9STRA)

HSP 1 Score: 149 bits (376), Expect = 2.660e-40
Identity = 62/116 (53.45%), Postives = 86/116 (74.14%), Query Frame = 1 
Query:    1 KVPDVRFYKQTGDINKIPWSGLFGTGGYIAPEIMSQKPFGKPADLWSVGVMLYQMISGRLPFIPARVCVTKPVSFPATVWADVSVGVKEVICGLLEKDPSQRLTAVQALQHPWIQT 348
            KVPDVRFYKQTGD++K+P++GL G+ GY+APE+   +P+GKP DLWSVG++LY+M++G  PF P  VCV +P  F   +W   S   K+++  LLE+DP++R TA QAL HPW  +
Sbjct:  324 KVPDVRFYKQTGDVHKVPFNGLTGSVGYMAPELFQSQPYGKPVDLWSVGIILYEMLTGYQPFYPPSVCVDEPAEFTPRIWKKFSAEAKDLVSHLLERDPAKRFTAEQALTHPWFDS 439
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BLAST of mRNA_S-dermatodea_contig11297.832.1 vs. uniprot
Match: W7TQL8_9STRA (Calcium calmodulin-dependent protein variant variant n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQL8_9STRA)

HSP 1 Score: 139 bits (351), Expect = 1.150e-38
Identity = 62/123 (50.41%), Postives = 86/123 (69.92%), Query Frame = 1 
Query:    1 KVPDVRFYKQTGDINKIPWSGLFGTGGYIAPEIMSQKPFGKPADLWSVGVMLYQMISGRLPFIPARVCVTKPVSFPATVWADVSVGVKEVICGLLEKDPSQRLTAVQALQHPWIQTIHHLRPS 369
            KVPDVRF+KQTGDI ++P+S + GTGG+I PEI+ ++PFGKP DLW+VGV+ Y+M++G LPFIP   C+ +PV F    W  +S   +  I  LL  D ++R TA +AL H W+QT+    P+
Sbjct:   67 KVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWLQTVPEWGPT 189
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BLAST of mRNA_S-dermatodea_contig11297.832.1 vs. uniprot
Match: A0A8K1CHE0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHE0_PYTOL)

HSP 1 Score: 146 bits (368), Expect = 5.010e-38
Identity = 60/113 (53.10%), Postives = 85/113 (75.22%), Query Frame = 1 
Query:    1 KVPDVRFYKQTGDINKIPWSGLFGTGGYIAPEIMSQKPFGKPADLWSVGVMLYQMISGRLPFIPARVCVTKPVSFPATVWADVSVGVKEVICGLLEKDPSQRLTAVQALQHPW 339
            KVPDVRFYK TGD++K+P++G+ GT GYIAPE++ Q+P+GKP D+WSVG+++Y+M++G  PF P   C+ +   F   VW+ VS   K+++ GLLE DP++RLTA  AL H W
Sbjct:  566 KVPDVRFYKLTGDVHKVPFTGVTGTPGYIAPELLQQQPYGKPVDMWSVGIVIYEMLTGYQPFYPPHACIDEKADFNDRVWSSVSAQAKDLVQGLLESDPTKRLTAADALSHGW 678
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BLAST of mRNA_S-dermatodea_contig11297.832.1 vs. uniprot
Match: A0A485L9B2_9STRA (Aste57867_18155 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9B2_9STRA)

HSP 1 Score: 145 bits (367), Expect = 8.080e-38
Identity = 60/116 (51.72%), Postives = 85/116 (73.28%), Query Frame = 1 
Query:    1 KVPDVRFYKQTGDINKIPWSGLFGTGGYIAPEIMSQKPFGKPADLWSVGVMLYQMISGRLPFIPARVCVTKPVSFPATVWADVSVGVKEVICGLLEKDPSQRLTAVQALQHPWIQT 348
            KVPDVRFYK TGD++K+P++GL G+ GY+APE+   +P+GKP DLWSVG++LY+M++G  PF P  +CV +P  F   VW   S   ++++  LLE+DP++R TA QAL HPW  +
Sbjct:  602 KVPDVRFYKHTGDVHKVPFNGLTGSVGYMAPELFQSQPYGKPVDLWSVGIILYEMLTGYQPFYPPSICVDEPAEFTPRVWNKFSAEARDLVSHLLERDPTKRFTAEQALTHPWFDS 717
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BLAST of mRNA_S-dermatodea_contig11297.832.1 vs. uniprot
Match: A0A397B3Z2_9STRA (Protein kinase domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397B3Z2_9STRA)

HSP 1 Score: 141 bits (356), Expect = 2.080e-37
Identity = 57/116 (49.14%), Postives = 83/116 (71.55%), Query Frame = 1 
Query:    1 KVPDVRFYKQTGDINKIPWSGLFGTGGYIAPEIMSQKPFGKPADLWSVGVMLYQMISGRLPFIPARVCVTKPVSFPATVWADVSVGVKEVICGLLEKDPSQRLTAVQALQHPWIQT 348
            KVPDVRF+K TGD++K+P++GL G+ GY+APE+   +P+GKP DLWSVG++LY+M++G  PF P  +CV +P  F   +W   S    +++  LLE+DP++R T  QAL HPW  +
Sbjct:  318 KVPDVRFFKHTGDVHKVPFNGLTGSVGYMAPELFQSQPYGKPVDLWSVGIILYEMLTGYQPFSPPSICVDEPAEFTPRIWKKFSAEAADLVAHLLERDPTKRFTVEQALTHPWFDS 433
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BLAST of mRNA_S-dermatodea_contig11297.832.1 vs. uniprot
Match: A0A1V9ZMV2_9STRA (Kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZMV2_9STRA)

HSP 1 Score: 143 bits (361), Expect = 5.860e-37
Identity = 59/116 (50.86%), Postives = 85/116 (73.28%), Query Frame = 1 
Query:    1 KVPDVRFYKQTGDINKIPWSGLFGTGGYIAPEIMSQKPFGKPADLWSVGVMLYQMISGRLPFIPARVCVTKPVSFPATVWADVSVGVKEVICGLLEKDPSQRLTAVQALQHPWIQT 348
            KVPDVRF+K TGD++K+P++G+ G+ GY+APE+   +P+GKP DLWSVG+M+Y+M++G  PF P   C+T+PV F   +W   S   ++ +  LLE+DP++R TA QAL HPW  T
Sbjct:  628 KVPDVRFFKHTGDVHKVPFTGMTGSVGYMAPELFDSQPYGKPIDLWSVGIMVYEMLTGFQPFYPPSSCITEPVQFQPRLWKKFSPEAQDFVTHLLERDPTKRFTAEQALTHPWFDT 743
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BLAST of mRNA_S-dermatodea_contig11297.832.1 vs. uniprot
Match: A0A3F2S2D0_9STRA (Protein kinase domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S2D0_9STRA)

HSP 1 Score: 143 bits (360), Expect = 6.610e-37
Identity = 56/116 (48.28%), Postives = 88/116 (75.86%), Query Frame = 1 
Query:    1 KVPDVRFYKQTGDINKIPWSGLFGTGGYIAPEIMSQKPFGKPADLWSVGVMLYQMISGRLPFIPARVCVTKPVSFPATVWADVSVGVKEVICGLLEKDPSQRLTAVQALQHPWIQT 348
            KVPDVRFYK TGD++K+P++G+ GT GYIAPE++ ++ +GKP D+WSVG+++++M++G  PF P  +C+ +   F   VW  +S   K ++ GLL++DP++RLTA +AL HPW ++
Sbjct:  572 KVPDVRFYKFTGDVHKVPFTGVTGTSGYIAPELLMKQSYGKPVDMWSVGIIIFEMLTGYQPFYPPHMCIEENADFSDRVWKTISANAKSLVEGLLQRDPTKRLTAAEALAHPWFES 687
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11297.832.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9F4_ECTSI1.160e-7988.49Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A835ZDX2_9STRA9.440e-5159.69Protein kinase domain-containing protein n=1 Tax=T... [more]
A0A7S3XRG1_HETAK2.550e-4451.18Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6G0XFT2_9STRA2.660e-4053.45Protein kinase domain-containing protein n=1 Tax=A... [more]
W7TQL8_9STRA1.150e-3850.41Calcium calmodulin-dependent protein variant varia... [more]
A0A8K1CHE0_PYTOL5.010e-3853.10Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A485L9B2_9STRA8.080e-3851.72Aste57867_18155 protein n=1 Tax=Aphanomyces stella... [more]
A0A397B3Z2_9STRA2.080e-3749.14Protein kinase domain-containing protein (Fragment... [more]
A0A1V9ZMV2_9STRA5.860e-3750.86Kinase n=1 Tax=Thraustotheca clavata TaxID=74557 R... [more]
A0A3F2S2D0_9STRA6.610e-3748.28Protein kinase domain-containing protein n=3 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11297contigS-dermatodea_contig11297:2234..6195 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score262.7
Seed ortholog evalue1e-67
Seed eggNOG ortholog2880.D7G9F4
Preferred nameCDPK1
KEGG koko:K00924,ko:K02183,ko:K04515,ko:K06180,ko:K08794,ko:K13412
KEGG Pathwayko04012,ko04014,ko04015,ko04016,ko04020,ko04022,ko04024,ko04066,ko04070,ko04114,ko04217,ko04218,ko04261,ko04270,ko04310,ko04360,ko04371,ko04626,ko04713,ko04720,ko04722,ko04725,ko04728,ko04740,ko04744,ko04745,ko04750,ko04910,ko04911,ko04912,ko04915,ko04916,ko04921,ko04922,ko04924,ko04925,ko04934,ko04970,ko04971,ko05010,ko05031,ko05034,ko05133,ko05145,ko05152,ko05167,ko05200,ko05205,ko05214,ko05418,map04012,map04014,map04015,map04016,map04020,map04022,map04024,map04066,map04070,map04114,map04217,map04218,map04261,map04270,map04310,map04360,map04371,map04626,map04713,map04720,map04722,map04725,map04728,map04740,map04744,map04745,map04750,map04910,map04911,map04912,map04915,map04916,map04921,map04922,map04924,map04925,map04934,map04970,map04971,map05010,map05031,map05034,map05133,map05145,map05152,map05167,map05200,map05205,map05214,map05418
GOsGO:0001101,GO:0001558,GO:0002831,GO:0002832,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004683,GO:0004697,GO:0004698,GO:0004713,GO:0004721,GO:0004722,GO:0005488,GO:0005509,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005777,GO:0005778,GO:0005783,GO:0005789,GO:0005829,GO:0005886,GO:0005911,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0006970,GO:0007154,GO:0007165,GO:0007275,GO:0007568,GO:0008150,GO:0008152,GO:0009266,GO:0009267,GO:0009314,GO:0009408,GO:0009409,GO:0009414,GO:0009415,GO:0009416,GO:0009506,GO:0009555,GO:0009605,GO:0009607,GO:0009620,GO:0009628,GO:0009636,GO:0009651,GO:0009719,GO:0009725,GO:0009737,GO:0009738,GO:0009751,GO:0009755,GO:0009787,GO:0009789,GO:0009931,GO:0009937,GO:0009939,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010119,GO:0010150,GO:0010152,GO:0010243,GO:0010286,GO:0010359,GO:0010646,GO:0010647,GO:0010769,GO:0010857,GO:0010959,GO:0012505,GO:0014070,GO:0016020,GO:0016036,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0018105,GO:0018108,GO:0018193,GO:0018209,GO:0018212,GO:0019538,GO:0019899,GO:0019902,GO:0019903,GO:0021700,GO:0022603,GO:0022604,GO:0022898,GO:0023051,GO:0023052,GO:0023056,GO:0030054,GO:0031090,GO:0031347,GO:0031348,GO:0031667,GO:0031668,GO:0031669,GO:0031903,GO:0031984,GO:0032101,GO:0032102,GO:0032409,GO:0032412,GO:0032501,GO:0032502,GO:0032870,GO:0032879,GO:0033554,GO:0033993,GO:0034762,GO:0034765,GO:0035556,GO:0036211,GO:0040008,GO:0042175,GO:0042221,GO:0042493,GO:0042578,GO:0042579,GO:0042594,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043266,GO:0043269,GO:0043412,GO:0043900,GO:0043901,GO:0044070,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045595,GO:0046677,GO:0046777,GO:0046872,GO:0046898,GO:0047484,GO:0048229,GO:0048366,GO:0048367,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048585,GO:0048638,GO:0048731,GO:0048827,GO:0048831,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050832,GO:0050896,GO:0051049,GO:0051128,GO:0051239,GO:0051510,GO:0051704,GO:0051707,GO:0051716,GO:0055044,GO:0060284,GO:0060688,GO:0060992,GO:0065007,GO:0065009,GO:0070887,GO:0071215,GO:0071229,GO:0071310,GO:0071396,GO:0071495,GO:0071496,GO:0071704,GO:0071944,GO:0080092,GO:0080134,GO:0090693,GO:0097305,GO:0097306,GO:0098542,GO:0098588,GO:0098805,GO:0098827,GO:0099402,GO:0140096,GO:1900424,GO:1900425,GO:1900618,GO:1901000,GO:1901001,GO:1901002,GO:1901016,GO:1901379,GO:1901419,GO:1901421,GO:1901564,GO:1901654,GO:1901698,GO:1901700,GO:1901701,GO:1901979,GO:1902456,GO:1902584,GO:1903959,GO:1904062,GO:1905428,GO:1905957,GO:1905959,GO:2000026,GO:2000032,GO:2000070,GO:2000241,GO:2001257
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0032@1,KOG0032@2759
EC2.7.11.1,2.7.11.17,5.4.99.23
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko01009,ko03009,ko03036,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Exons4
Model size444
Cds size444
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11297.832.1prot_S-dermatodea_contig11297.832.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11297 2234..6195 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924195.6746092-CDS-S-dermatodea_contig11297:2233..23721622924195.6746092-CDS-S-dermatodea_contig11297:2233..2372Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11297 2234..2372 -
1694079084.2509558-CDS-S-dermatodea_contig11297:2233..23721694079084.2509558-CDS-S-dermatodea_contig11297:2233..2372Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11297 2234..2372 -
1622924195.6835513-CDS-S-dermatodea_contig11297:3497..35631622924195.6835513-CDS-S-dermatodea_contig11297:3497..3563Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11297 3498..3563 -
1694079084.269257-CDS-S-dermatodea_contig11297:3497..35631694079084.269257-CDS-S-dermatodea_contig11297:3497..3563Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11297 3498..3563 -
1622924195.6915615-CDS-S-dermatodea_contig11297:4597..46991622924195.6915615-CDS-S-dermatodea_contig11297:4597..4699Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11297 4598..4699 -
1694079084.2798128-CDS-S-dermatodea_contig11297:4597..46991694079084.2798128-CDS-S-dermatodea_contig11297:4597..4699Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11297 4598..4699 -
1622924195.7018507-CDS-S-dermatodea_contig11297:6058..61951622924195.7018507-CDS-S-dermatodea_contig11297:6058..6195Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11297 6059..6195 -
1694079084.2908626-CDS-S-dermatodea_contig11297:6058..61951694079084.2908626-CDS-S-dermatodea_contig11297:6058..6195Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11297 6059..6195 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11297.832.1

>prot_S-dermatodea_contig11297.832.1 ID=prot_S-dermatodea_contig11297.832.1|Name=mRNA_S-dermatodea_contig11297.832.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=148bp
KVPDVRFYKQTGDINKIPWSGLFGTGGYIAPEIMSQKPFGKPADLWSVGV
MLYQMISGRLPFIPARVCVTKPVSFPATVWADVSVGVKEVICGLLEKDPS
QRLTAVQALQHPWIQTIHHLRPSFPHFVPKQGRCNSVGSSSGGGGGSG
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mRNA from alignment at S-dermatodea_contig11297:2234..6195-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11297.832.1 ID=mRNA_S-dermatodea_contig11297.832.1|Name=mRNA_S-dermatodea_contig11297.832.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3962bp|location=Sequence derived from alignment at S-dermatodea_contig11297:2234..6195- (Saccorhiza dermatodea SderLu1190fm monoicous)
AAGGTGCCGGATGTGCGCTTCTACAAGCAAACAGGGGACATCAACAAGAT
CCCGTGGTCCGGGCTGTTCGGCACCGGCGGTTACATCGCCCCAGAGATCA
TGAGCCAGAAGCCCTTCGGCAAGCCCGCCGACCTCTGGTGAGCATGAGGC
TTGGAGTTGCGCTACTACTGTTGTACCACTTTTTGTTTGTTGTCTCCCAC
AGCTAAATTGTACCCAGTCAATAGGACAGCTGGTAAGTACCGCCTGTCGA
TAAGATGCAGGTGTCTGCGGAGCGTTTTTGGCGACATTTCAATGGTGTCA
CTGACTTTATCTTCTTTAGTATCTTGCCGTCGGGCAAAGTGCTACAGTAG
AAGACAGTACAATAGTCAGCTACGGCAATCACCTAATACCAGAGACACAC
GGAGGGCGCATACTCAATCGTGCACATACATGAAGCGCATGCATAAACAC
AGTCAGACTACATAATATCATAATACCAGCCTAGGTACACGCCTAGATAC
CAGCAGTCATGCTACATATCATATTACACGCCTAGGCACATACATACTTC
GTATAAAGTGCATATGCGAAGAACCAGACTATATATTTTTTATAAACTAA
GAAGTATAATATTGTGAAGGGTATACCGGCTCTTCTTGGTGCGGCAACTA
TGCTTACGGCTGGGGGTTCTGCTTTTAGCTCGGTGTTAGCTCGATGTTCT
CCTCTTTTAGAACATATATAGCCGAAAGCGCTTGTCAACACAACATAATT
TTTTCAAGTGTTAATTTATTGAAAATAAGTCCGTTTTTTTTTTTAACCCT
TCAAAAGGCGTTTTAGCCTCAGAGATGATGTATGATAACGGTTGCCATTG
TCTTTGTGGTTTGGTTCGCCCTCGCTCGTGCCCCTTTGTTGGACGCTGTT
TGTGTTTGCATACCCCGGTTACATGCTAATTCCAATATTTTTTGTGGATT
TATCGATTTGTCATGTGACCACGAGCGAGGGCGGGATCGGTAACCATTGG
CAGGCAGGCCGGTCGGTTGTAAATCTTATTAATTGTGTGGTAATCAATCA
ATCAATCAATCAATCAATCAAACCAATCGATCAATCATTGATTATCAATC
AATCCAATCAAATAAACCAAACAAATACACCAATCAAGGCAATCATCCAA
TCAATCAGTCAATCAAAGCAATCAATCTATCAACTAATAAAATCAGCCAA
TCAATCAATCAAATCACTCAATCAACCAATCAATCAATCAATCAAGCCAA
TCAATCAATCAATCAATCCAATCACACCAATCAAATCGATCAACCAATCA
AATCAACCAACCAACCAATCATATCAATCAACCAATCCAATCAATCAATC
AAATCAGTCAATCAATCAATCAAATCAGTCAATCAATCAATCACTCAAAG
ATCAGACACTATCATACATTCGTTTGGTTCTCTTACCTCCGTGACACTTC
CTGACGCGATTTTCTCTCTTGATCCGACGTCCCGATATACACCCAGGAGC
GTCGGGGTTATGCTGTACCAGATGATCAGCGGACGCCTGCCCTTCATACC
TGCGAGGGTGTGTGTCACCAAGCCAGTCTCCTTCCCGGCCACTGTTTGGT
GAGCGAGAGCCTGCTGGACGCTAAAACCTCGCGCGTTTGCTGACTGAGTT
CCGTTGCTTCTTTTTCTGTTTCTCGTTTTTGTCTCACCACGAGCGGAATC
AACGACTTTTCGCCTGGCCGGGGCCCTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTATCTGTTTTCGAGTGTTTGTTTTTTTTAATTCCTTTTTNNNNNNN
NNNCCCCCGCGTCTGTTGTTTGCTGGGGCGGGTCCCCGCTTCTGCCTCCC
CTCGGTGGGTTTCGTCGTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTGCATACTTGTGTATCTGTTTCCGAGAGTTAGTTTATGTCAATTCCT
TCTTCTTTTTTTAATAAAGAAACAGAACACAGAAAGTGCACAATCCATAC
TATTAATAACTCATCCGGACAGGACCCGGGTGGACTTTGTTGTACACAAA
ACTGATACCTGGTACTATGTAGGTAATTCCGTAGGGTATCTTTCTCTATC
TCACGATTTCTTTCTCATCTGACCACGAGCGGGATCGGCAACCATTGGTG
GGCCGGTCGGTTGTAAGTGTGATAACCGAATCAATCAATCAAATCAAAAT
CAATATACGAGTATGACAGACAGGCTTTTTTCGGAATCCCGTCTATGGTC
TCGATGGGTTTGTCAATGAACCAACCAATCAATCACTCAATGTTGGCAGC
ACTTTTCTTCGCTCAGAGCACGTATCGGCCGTTTCTGCCATTTCTCAGCG
GTCGTTTTCGACCAACGCGTGCGTGTAATAAAAAATACACAAGTATTTCG
ACCAAACGCGTTCATGCGAAAATGGAAACGTTGAAGATCTTGTTCGAGTT
TTGCCCTGTTTTTTCGCGGCACCGCGAATAATGCGTACACAGCCCTCACC
CGTTCTCCAGACAGGCAGACAGACAGACAGACAGATTGATTAGTCGCTTT
CAAAATACCATCCGACACTCGCGCGTCGCTGAACTGGATGCTGTTTCGTT
TTATTTATTTTTTGTCTTTCGTTGATTGACAGGGCGGACGTTAGCGTGGG
CGTCAAGGAAGTTATCTGCGGACTGTTGGAGAAGGATCCCTCCCAAAGGT
AATTTCAGGACAGGTGCAGGCAGCAGTACGATACGAGAGCTTGCGATAGC
CAGTCGCGCGAACGGAGCGGGAACCCAGGCCCAGTCAAGCCCAGCTCGGG
CCGGGACGGGGCCGTTGTGTGTTCGTCGCGCGATGGTGATGGGCACACAA
TATTTATTGTGTGGTAGTGCTGCGGGGAACCGGCATTTAGAAACAAGCCG
GAGAGGGTACATTGGACAGCAGTACAAAAAATGTGGTTGTGTCCATTCAC
CCTCTGAAACATTTTTTTTTTGTAAACACAGAGCGAGCGTTGAGGTCCCT
ATCTTTTTTGTAGAGGGAAATAAGTACGATGGCTCAAGCTAACTCTCAGT
GGAGGTCTACGTTTATGTATCCCACTGTGGGGTCATTGTCGGGATGTTTA
CATCTGGGTAGGGGTGTGGCACTACAATACAACTAAAATGCAACTCTGGG
AATAGAGTTTTCCCAGTTGTGGAATTTTGTGCGTGGACGTCCGTTTGTTA
TCGCAACTCGTGTTCACCCCTGAAACACTAAAATATTTGTAAAACACAGC
GAATGTTGGGGTCCAATTGTTTCTGTAGCATAAAATATGGCCCAAGCTAA
CTCAGTGGAGGTCCTCGTTATGTATGATGCTCTATTAATATAGTCCTACT
CTGTACTGCAGGTTATACTATTATATATGCTACATTGAGGTGGCTGCCGA
TTGGGTACCGTGACGTCTCCCGATGGCCAAATGTCCCGGTATCATCATCG
TCGTGATCACCCCTCCCGGCGCGTTTGCGCTCGCACGGAGATCAAAGTCC
CTTTGCGGTACTTGGAGTATAGTCACGCCTACTGAATGCGCAACATTTGG
TTGTCCGGTATGTCTAGTCAACCCATGGCATACCGTTTGGCGTCGCAACG
CAATGATGATGACCAGCAGCTGGGGTTTCATCCCTGTGAAACGCAGCCTG
GCCGCCGAAAACCCGGCATATCGCTCCGTCCCGGCATTGTTGGGACGCGG
TCTATGTCCGTATGAATACGACATGCGTTTAACAAAAGTAAGAACACCCC
CCCCCCCACCCGGTCTTCTGCCGCTATGTTGATCGACCAATCGAATATCT
GTGGCCCGATTCAATACCGACAGGCTTACGGCCGTTCAGGCCCTCCAGCA
CCCGTGGATCCAGACAATTCATCACCTTCGACCATCCTTCCCGCACTTCG
TGCCCAAGCAAGGCCGCTGTAACAGCGTCGGGAGTAGCTCGGGCGGCGGC
GGCGGCAGCGGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig11297:2234..6195-

>mRNA_S-dermatodea_contig11297.832.1 ID=mRNA_S-dermatodea_contig11297.832.1|Name=mRNA_S-dermatodea_contig11297.832.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=888bp|location=Sequence derived from alignment at S-dermatodea_contig11297:2234..6195- (Saccorhiza dermatodea SderLu1190fm monoicous)
AAGGTGCCGGATGTGCGCTTCTACAAGCAAACAGGGGACATCAACAAGAT
CCCGTGGTCCGGGCTGTTCGGCACCGGCGGTTACATCGCCCCAGAGATCA
TGAGCCAGAAGCCCTTCGGCAAGCCCGCCGACCTCTGAAGGTGCCGGATG
TGCGCTTCTACAAGCAAACAGGGGACATCAACAAGATCCCGTGGTCCGGG
CTGTTCGGCACCGGCGGTTACATCGCCCCAGAGATCATGAGCCAGAAGCC
CTTCGGCAAGCCCGCCGACCTCTGGAGCGTCGGGGTTATGCTGTACCAGA
TGATCAGCGGACGCCTGCCCTTCATACCTGCGAGGGTGTGTGTCACCAAG
CCAGTCTCCTTCCCGGCCACTGTTTGGAGCGTCGGGGTTATGCTGTACCA
GATGATCAGCGGACGCCTGCCCTTCATACCTGCGAGGGTGTGTGTCACCA
AGCCAGTCTCCTTCCCGGCCACTGTTTGGGCGGACGTTAGCGTGGGCGTC
AAGGAAGTTATCTGCGGACTGTTGGAGAAGGATCCCTCCCAAAGGGCGGA
CGTTAGCGTGGGCGTCAAGGAAGTTATCTGCGGACTGTTGGAGAAGGATC
CCTCCCAAAGGCTTACGGCCGTTCAGGCCCTCCAGCACCCGTGGATCCAG
ACAATTCATCACCTTCGACCATCCTTCCCGCACTTCGTGCCCAAGCAAGG
CCGCTGTAACAGCGTCGGGAGTAGCTCGGGCGGCGGCGGCGGCAGCGGGG
CTTACGGCCGTTCAGGCCCTCCAGCACCCGTGGATCCAGACAATTCATCA
CCTTCGACCATCCTTCCCGCACTTCGTGCCCAAGCAAGGCCGCTGTAACA
GCGTCGGGAGTAGCTCGGGCGGCGGCGGCGGCAGCGGG
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