mRNA_S-dermatodea_contig1129.823.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig1129.823.1
Unique NamemRNA_S-dermatodea_contig1129.823.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1129.823.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1129contigS-dermatodea_contig1129:1758..2554 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score85.5
Seed ortholog evalue2e-14
Seed eggNOG ortholog2880.D8LU43
Preferred nameCAPN7
KEGG koko:K08576
GOsGO:0000815,GO:0003674,GO:0003824,GO:0004175,GO:0004197,GO:0004198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0006082,GO:0006508,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009058,GO:0009268,GO:0009308,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010008,GO:0010565,GO:0010632,GO:0010634,GO:0012505,GO:0016020,GO:0016053,GO:0016787,GO:0016999,GO:0017000,GO:0017144,GO:0018130,GO:0019222,GO:0019538,GO:0019748,GO:0019752,GO:0019904,GO:0030334,GO:0030335,GO:0030653,GO:0030654,GO:0031090,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031410,GO:0031982,GO:0032787,GO:0032879,GO:0032991,GO:0033238,GO:0033240,GO:0033244,GO:0033246,GO:0034248,GO:0034250,GO:0034641,GO:0036452,GO:0040012,GO:0040017,GO:0042316,GO:0042318,GO:0042762,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043455,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0046394,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051176,GO:0051239,GO:0051240,GO:0051270,GO:0051272,GO:0051716,GO:0062012,GO:0062013,GO:0065007,GO:0070011,GO:0071214,GO:0071467,GO:0071704,GO:0072330,GO:0072338,GO:0072339,GO:0090541,GO:0097264,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0104004,GO:0140096,GO:1900196,GO:1900198,GO:1900376,GO:1900378,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:2000145,GO:2000147
EggNOG free text desc.calcium-dependent cysteine-type endopeptidase activity
EggNOG OGsKOG0045@1,KOG0045@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Hectar predicted targeting categoryother localisation
Exons2
Model size395
Cds size393
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924194.9878592-CDS-S-dermatodea_contig1129:1757..20041622924194.9878592-CDS-S-dermatodea_contig1129:1757..2004Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1129 1758..2004 +
1694079083.780947-CDS-S-dermatodea_contig1129:1757..20041694079083.780947-CDS-S-dermatodea_contig1129:1757..2004Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1129 1758..2004 +
1622924195.0012822-CDS-S-dermatodea_contig1129:2408..25541622924195.0012822-CDS-S-dermatodea_contig1129:2408..2554Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1129 2409..2554 +
1694079083.793801-CDS-S-dermatodea_contig1129:2408..25541694079083.793801-CDS-S-dermatodea_contig1129:2408..2554Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1129 2409..2554 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1129.823.1prot_S-dermatodea_contig1129.823.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig1129 1758..2554 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig1129.823.1

>prot_S-dermatodea_contig1129.823.1 ID=prot_S-dermatodea_contig1129.823.1|Name=mRNA_S-dermatodea_contig1129.823.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=131bp
ESVSCFSTALRATNLSRTNRKALVETVEFSQKRAEEIEEEIEIEFFEDLM
PEAPTTRPVAPANAPRAANRAPVKPAPTEAEEEEEKGRLLLKTAIHLDER
GTKSGWAEAGTKKQATEAYVEAAEVCDSRP*
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mRNA from alignment at S-dermatodea_contig1129:1758..2554+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig1129.823.1 ID=mRNA_S-dermatodea_contig1129.823.1|Name=mRNA_S-dermatodea_contig1129.823.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=797bp|location=Sequence derived from alignment at S-dermatodea_contig1129:1758..2554+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GAAAGCGTCTCCTGCTTTTCGACAGCCCTTCGCGCTACCAACCTTTCAAG
AACCAACCGCAAGGCCTTGGTCGAGACCGTGGAGTTCTCCCAAAAGCGGG
CCGAAGAGATAGAGGAGGAGATAGAGATAGAGTTCTTCGAGGACCTCATG
CCGGAGGCGCCGACCACACGGCCGGTCGCGCCTGCCAATGCCCCTAGAGC
GGCCAATAGGGCTCCTGTCAAGCCGGCGCCAACTGAAGCGGAGGAGGGTA
GGTTTATCGGTGTGTAGAGTGTAAACAGGATTGCCATTGCGCGATCAGCG
GAACTAGACTCTATGCTGCAGTTGAAAAGCGCTATGATACAGAAGGGAGC
CCTACACAAGACAGTTGTACGTATCTGGTCTATACTGGCGCAGCAGTGTG
TGCGTAGAATAATATGTGGTTGGTGTACTCATTGATCGTGCATGCCGTAG
TCGTTAGACCATAGACCTCGGTTGGTGGGGGTATCTAAGCGCTTGACAAT
CACTGGCGGCTGAGCTCGCCCGACCGGGTTTCGTTTTCGAAGCGCGCCCC
CCAGATTTGCCGCGTGCCTGTCCCGCTTCCGCTAGTGATGATGTTTTGTC
AAAGTAATCCTAACCCTTACAACGTGTGTGCGCTCGCGTTTGCCGCACCA
GAGGAGGAGAAGGGTAGACTGTTGCTCAAGACTGCCATCCACCTGGATGA
AAGGGGCACCAAGTCAGGGTGGGCGGAGGCAGGGACGAAGAAGCAAGCTA
CGGAGGCATACGTCGAGGCAGCAGAGGTATGTGACTCCCGCCCCTAA
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Coding sequence (CDS) from alignment at S-dermatodea_contig1129:1758..2554+

>mRNA_S-dermatodea_contig1129.823.1 ID=mRNA_S-dermatodea_contig1129.823.1|Name=mRNA_S-dermatodea_contig1129.823.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=786bp|location=Sequence derived from alignment at S-dermatodea_contig1129:1758..2554+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GAAAGCGTCTCCTGCTTTTCGACAGCCCTTCGCGCTACCAACCTTTCAAG
AACCAACCGCAAGGCCTTGGTCGAGACCGTGGAGTTCTCCCAAAAGCGGG
CCGAAGAGATAGAGGAGGAGATAGAGATAGAGTTCTTCGAGGACCTCATG
CCGGAGGCGCCGACCACACGGCCGGTCGCGCCTGCCAATGCCCCTAGAGC
GGCCAATAGGGCTCCTGTCAAGCCGGCGCCAACTGAAGCGGAGGAGGGAA
AGCGTCTCCTGCTTTTCGACAGCCCTTCGCGCTACCAACCTTTCAAGAAC
CAACCGCAAGGCCTTGGTCGAGACCGTGGAGTTCTCCCAAAAGCGGGCCG
AAGAGATAGAGGAGGAGATAGAGATAGAGTTCTTCGAGGACCTCATGCCG
GAGGCGCCGACCACACGGCCGGTCGCGCCTGCCAATGCCCCTAGAGCGGC
CAATAGGGCTCCTGTCAAGCCGGCGCCAACTGAAGCGGAGGAGGAGGAGG
AGAAGGGTAGACTGTTGCTCAAGACTGCCATCCACCTGGATGAAAGGGGC
ACCAAGTCAGGGTGGGCGGAGGCAGGGACGAAGAAGCAAGCTACGGAGGC
ATACGTCGAGGCAGCAGAGGTATGTGACTCCCGCCCCTAAAGGAGGAGAA
GGGTAGACTGTTGCTCAAGACTGCCATCCACCTGGATGAAAGGGGCACCA
AGTCAGGGTGGGCGGAGGCAGGGACGAAGAAGCAAGCTACGGAGGCATAC
GTCGAGGCAGCAGAGGTATGTGACTCCCGCCCCTAA
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