mRNA_S-dermatodea_contig11283.818.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11283.818.1 vs. uniprot
Match: D7FVA7_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA7_ECTSI) HSP 1 Score: 160 bits (404), Expect = 2.120e-47 Identity = 75/86 (87.21%), Postives = 81/86 (94.19%), Query Frame = 2
Query: 2 GWLNGFGEE-GVKFDSSRDRGRPFSFKVGTGMVIKAWDEALLDMQIGERRQITVPPQLGYGKRGAGGIIPPDSTLYFDVELLAVQP 256
GWLN FG+E G KFDSSRDRGRPFSFKVGTG VIKAWDEA+LDM+IGERRQITVPPQLGYG RGAGG+IPP++TLYFDVELLAVQP
Sbjct: 133 GWLNAFGDEDGAKFDSSRDRGRPFSFKVGTGQVIKAWDEAMLDMRIGERRQITVPPQLGYGSRGAGGVIPPNATLYFDVELLAVQP 218
BLAST of mRNA_S-dermatodea_contig11283.818.1 vs. uniprot
Match: A0A835ZFS8_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFS8_9STRA) HSP 1 Score: 134 bits (337), Expect = 1.480e-37 Identity = 62/85 (72.94%), Postives = 72/85 (84.71%), Query Frame = 2
Query: 2 GWLNGFGEE--GVKFDSSRDRGRPFSFKVGTGMVIKAWDEALLDMQIGERRQITVPPQLGYGKRGAGGIIPPDSTLYFDVELLAV 250
GWL GFG+E VKFDSSRDRGRPF+FK G G VIKAWDE++L M++GERR I VPP LGYGKRGAGG+IP ++TLYFDVELL +
Sbjct: 109 GWLGGFGDEDASVKFDSSRDRGRPFTFKAGVGQVIKAWDESVLAMKVGERRLIIVPPDLGYGKRGAGGVIPANATLYFDVELLGI 193
BLAST of mRNA_S-dermatodea_contig11283.818.1 vs. uniprot
Match: K9U471_CHRTP (Peptidyl-prolyl cis-trans isomerase n=4 Tax=Chroococcidiopsis TaxID=54298 RepID=K9U471_CHRTP) HSP 1 Score: 128 bits (322), Expect = 1.970e-35 Identity = 58/77 (75.32%), Postives = 67/77 (87.01%), Query Frame = 2
Query: 23 EEGVKFDSSRDRGRPFSFKVGTGMVIKAWDEALLDMQIGERRQITVPPQLGYGKRGAGGIIPPDSTLYFDVELLAVQ 253
E+G KFDSSRDRG+PFSFKVGTG VIK WDEAL M++GERRQI +PP+LGYG RGAGG+IPP++TL FDVELL V
Sbjct: 106 EDGSKFDSSRDRGQPFSFKVGTGQVIKGWDEALSTMKVGERRQIVIPPELGYGARGAGGVIPPNATLIFDVELLKVN 182
BLAST of mRNA_S-dermatodea_contig11283.818.1 vs. uniprot
Match: A0A7S3PZM0_9STRA (Peptidylprolyl isomerase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZM0_9STRA) HSP 1 Score: 127 bits (320), Expect = 6.690e-35 Identity = 58/82 (70.73%), Postives = 69/82 (84.15%), Query Frame = 2
Query: 2 GWLNGFGEEGVKFDSSRDRGRPFSFKVGTGMVIKAWDEALLDMQIGERRQITVPPQLGYGKRGAGGIIPPDSTLYFDVELLA 247
GWL+GF E KFDSSRDRGRPFSFKVG G VI+ WDE+ LDM++GERR + +PP+LGYG RGAGG+IP +TLYFDVELL+
Sbjct: 120 GWLDGFQSE-KKFDSSRDRGRPFSFKVGAGQVIRGWDESFLDMKVGERRNVIIPPRLGYGDRGAGGLIPGGATLYFDVELLS 200
BLAST of mRNA_S-dermatodea_contig11283.818.1 vs. uniprot
Match: A0A6U0I9I6_9STRA (Peptidylprolyl isomerase n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0I9I6_9STRA) HSP 1 Score: 125 bits (315), Expect = 2.190e-34 Identity = 58/84 (69.05%), Postives = 69/84 (82.14%), Query Frame = 2
Query: 2 GWLNGFGEEGVKFDSSRDRGRPFSFKVGTGMVIKAWDEALLDMQIGERRQITVPPQLGYGKRGAGGIIPPDSTLYFDVELLAVQ 253
GWL+GF E KFDSSRDRGRPFSF+VG G VI+ WDE+ M++GERRQ+ +P +LGYG RGAGGIIP +TLYFDVELLA+Q
Sbjct: 99 GWLDGF-ESIKKFDSSRDRGRPFSFRVGAGQVIRGWDESFASMKVGERRQVIIPARLGYGDRGAGGIIPGGATLYFDVELLAIQ 181
BLAST of mRNA_S-dermatodea_contig11283.818.1 vs. uniprot
Match: A0A6S8ZS26_9STRA (Peptidylprolyl isomerase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZS26_9STRA) HSP 1 Score: 125 bits (315), Expect = 2.900e-34 Identity = 57/83 (68.67%), Postives = 69/83 (83.13%), Query Frame = 2
Query: 2 GWLNGFGEEGVKFDSSRDRGRPFSFKVGTGMVIKAWDEALLDMQIGERRQITVPPQLGYGKRGAGGIIPPDSTLYFDVELLAV 250
GWL+GF + KFDSSRDRGRPFSFKVG G VI+ WDE+ M++GERRQ+ +PP+LGYG RGAGG+IP +TLYFDVELLA+
Sbjct: 109 GWLDGF-DSIRKFDSSRDRGRPFSFKVGAGQVIRGWDESFASMKVGERRQVIIPPRLGYGDRGAGGVIPGGATLYFDVELLAI 190
BLAST of mRNA_S-dermatodea_contig11283.818.1 vs. uniprot
Match: A0A7S2Y1B3_9STRA (Peptidylprolyl isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1B3_9STRA) HSP 1 Score: 125 bits (315), Expect = 4.360e-34 Identity = 56/83 (67.47%), Postives = 70/83 (84.34%), Query Frame = 2
Query: 2 GWLNGFGEEGVKFDSSRDRGRPFSFKVGTGMVIKAWDEALLDMQIGERRQITVPPQLGYGKRGAGGIIPPDSTLYFDVELLAV 250
GWLNGF + KFDSS DR RPF+F+VG G VIK WDEA++ M++GE+R++ +PP+LGYGKRGAG +IPPDSTLYFDVELL +
Sbjct: 124 GWLNGF-DTAFKFDSSYDRRRPFTFQVGNGNVIKGWDEAVIQMKVGEKRRLIIPPELGYGKRGAGRVIPPDSTLYFDVELLGL 205
BLAST of mRNA_S-dermatodea_contig11283.818.1 vs. uniprot
Match: B8BZS4_THAPS (Peptidylprolyl isomerase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZS4_THAPS) HSP 1 Score: 122 bits (307), Expect = 5.420e-34 Identity = 58/83 (69.88%), Postives = 66/83 (79.52%), Query Frame = 2
Query: 2 GWLNGFGEEGVKFDSSRDRGRPFSFKVGTGMVIKAWDEALLDMQIGERRQITVPPQLGYGKRGAGGIIPPDSTLYFDVELLAV 250
GWL+GF E G KFDSSRDRGRPF FKVG G VI+ WDEA M++GERR I +P +L YG RGAGGIIP +TLYFDVELLA+
Sbjct: 34 GWLDGF-ESGKKFDSSRDRGRPFQFKVGAGQVIRGWDEAFSTMKVGERRNIILPSRLAYGDRGAGGIIPGGATLYFDVELLAI 115
BLAST of mRNA_S-dermatodea_contig11283.818.1 vs. uniprot
Match: A0A7S2R5E6_9STRA (Peptidylprolyl isomerase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R5E6_9STRA) HSP 1 Score: 124 bits (312), Expect = 7.580e-34 Identity = 56/83 (67.47%), Postives = 69/83 (83.13%), Query Frame = 2
Query: 2 GWLNGFGEEGVKFDSSRDRGRPFSFKVGTGMVIKAWDEALLDMQIGERRQITVPPQLGYGKRGAGGIIPPDSTLYFDVELLAV 250
GWL+GF E KFDSSRDRGRPFSFKVG G VI+ WDE+ M++GE+RQ+ +PP+LGYG RGAGG+IP +TLYFD+ELLA+
Sbjct: 106 GWLDGFDSE-KKFDSSRDRGRPFSFKVGAGQVIRGWDESFSVMKVGEKRQVIIPPRLGYGDRGAGGVIPGGATLYFDMELLAI 187
BLAST of mRNA_S-dermatodea_contig11283.818.1 vs. uniprot
Match: UPI0009E03E0B (FKBP-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Myxosarcina sp. GI1 TaxID=1541065 RepID=UPI0009E03E0B) HSP 1 Score: 124 bits (312), Expect = 9.440e-34 Identity = 53/76 (69.74%), Postives = 65/76 (85.53%), Query Frame = 2
Query: 23 EEGVKFDSSRDRGRPFSFKVGTGMVIKAWDEALLDMQIGERRQITVPPQLGYGKRGAGGIIPPDSTLYFDVELLAV 250
E+G KFDSSRDR RPFSFK+G G VIK WDE + DMQ+GERR + +PP+LGYG+RGAGG+IPP++TL FDVELL +
Sbjct: 120 EDGTKFDSSRDRNRPFSFKIGVGQVIKGWDEGVADMQVGERRTLIIPPELGYGERGAGGVIPPNATLIFDVELLKI 195 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11283.818.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11283.818.1 >prot_S-dermatodea_contig11283.818.1 ID=prot_S-dermatodea_contig11283.818.1|Name=mRNA_S-dermatodea_contig11283.818.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=113bp RVVERVRRGRSQVRLFARPRKAVQLQSGHRHGYQGLGRGFARHADRGAPAback to top mRNA from alignment at S-dermatodea_contig11283:6615..7518- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11283.818.1 ID=mRNA_S-dermatodea_contig11283.818.1|Name=mRNA_S-dermatodea_contig11283.818.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=904bp|location=Sequence derived from alignment at S-dermatodea_contig11283:6615..7518- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11283:6615..7518- >mRNA_S-dermatodea_contig11283.818.1 ID=mRNA_S-dermatodea_contig11283.818.1|Name=mRNA_S-dermatodea_contig11283.818.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=678bp|location=Sequence derived from alignment at S-dermatodea_contig11283:6615..7518- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |