mRNA_S-dermatodea_contig11283.817.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11283.817.1 vs. uniprot
Match: D7FVA6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA6_ECTSI) HSP 1 Score: 256 bits (654), Expect = 9.520e-79 Identity = 128/183 (69.95%), Postives = 149/183 (81.42%), Query Frame = 3
Query: 180 APHIVRGRRNQAYRSLMPCPVAQKPTE---LEVADETTRLEGIAQTVFGQDTRPVLLYDGVCNMCNSFVNLALDIDTDAQVRFSALQSQTGRALLSLSGRSPEDISSIVLVEANGDAHIQSDAVLRLGRVLGGPVGLAMFPGVLIPKFVRNKMYDTVADNRYSVLGKREECRCSDERYADRFI 719
A H+VR RS+ +AQ+ + LE+ D+ L GIA +VF +D RPVLLYDGVCNMCN FVNL LD+DTD + RFSALQSQTGRALL+LSGRSP+DISSIVLVE +G AHIQSDA+LR+GR+LGGPVGL + PGVL+PKFVRNKMYDTVADNRYSV+GKR+ CRCSDERYADRFI
Sbjct: 11 ASHVVRSGHKATPRSVTRPVMAQQQQQSSALELVDDAAILPGIAASVFEKDARPVLLYDGVCNMCNGFVNLFLDVDTDEKFRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRLLGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 193
BLAST of mRNA_S-dermatodea_contig11283.817.1 vs. uniprot
Match: A0A836CH16_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH16_9STRA) HSP 1 Score: 167 bits (423), Expect = 1.540e-45 Identity = 78/142 (54.93%), Postives = 108/142 (76.06%), Query Frame = 3
Query: 297 IAQTVFGQDTRPVLLYDGVCNMCNSFVNLALDIDTDAQ-VRFSALQSQTGRALLSLSGRSPEDISSIVLVEANGDAHIQSDAVLRLGRVLGGPVGLAMFPGVLIPKFVRNKMYDTVADNRYSVLGKREECRCSDERYADRFI 719
+ + VF D RPV+L+DGVCN CN++VN AL +D D + +RF+ LQ G+ALL +GR+ +DISSIVLV+ G ++I+SDA+LR+ + LGGP + PG L+P+F R+ +YD VA+NRYS++GKRE CRCSD +YADRFI
Sbjct: 6 VTREVFSSDKRPVVLFDGVCNFCNTWVNAALQLDPDGKALRFTPLQGDVGKALLQQAGRAADDISSIVLVDEQG-SYIKSDAILRISKALGGPAPVLAAPGFLMPQFARDTLYDLVANNRYSLMGKRETCRCSDPKYADRFI 146
BLAST of mRNA_S-dermatodea_contig11283.817.1 vs. uniprot
Match: A0A250X8I3_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X8I3_9CHLO) HSP 1 Score: 162 bits (411), Expect = 8.290e-43 Identity = 77/138 (55.80%), Postives = 98/138 (71.01%), Query Frame = 3
Query: 312 FGQDTRPVLLYDGVCNMCNSFVNLALDIDTDAQVRFSALQSQTGRALLSLSGRSPEDISSIVLVEANGDAHIQSDAVLRLGRVLGGPVGLAMFPGVLIPKFVRNKMYDTVADNRYSVLGKREECRCSDERYADRFI*E 725
F D RPV+LYDGVCN+CN VNL LD+D + R +ALQS GR LL GR P+DISSIV+VE G HI+SDA+LR+ + L P L GV +P F+R+ +YD VADNRYS+LGKR+ CR D+R+++RFI E
Sbjct: 85 FANDRRPVILYDGVCNLCNGAVNLMLDLDPRGEFRMAALQSPAGRRLLQTCGRQPDDISSIVVVERGGKHHIKSDAILRIAQGLSNPFPLFALFGVPVPPFLRDSLYDLVADNRYSILGKRDVCRLKDDRFSERFIAE 222
BLAST of mRNA_S-dermatodea_contig11283.817.1 vs. uniprot
Match: A0A7S2B0P4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B0P4_9STRA) HSP 1 Score: 149 bits (377), Expect = 4.910e-38 Identity = 76/150 (50.67%), Postives = 100/150 (66.67%), Query Frame = 3
Query: 273 DETTRLEGIAQTVFGQ-DTRPVLLYDGVCNMCNSFVNLALDIDTDAQVRFSALQSQTGRALLSLSGRSPEDISSIVLVEANGDAHIQSDAVLRLGRVLGGPVGLAMFPGVLIPKFVRNKMYDTVADNRYSVLGKREECRCSDERYADRFI 719
++T + A +F + D+RPV+L+DGVCNMCN VN ALD D D RF+ALQS TGRALL +GR P+DISSIVLV+ + A+I+SDA+LR+ R L P G+ PK R+ YD +A NRY V G+ + CR SD+R+ RFI
Sbjct: 65 EDTVAWQSRADAIFSEKDSRPVILFDGVCNMCNGGVNFALDWDPDGNFRFAALQSPTGRALLRRAGREPDDISSIVLVDDSA-AYIKSDAILRIARKLNLPFPFLGSAGLFFPKLPRDVFYDVIAQNRYRVFGRSQSCRLSDDRFEARFI 213
BLAST of mRNA_S-dermatodea_contig11283.817.1 vs. uniprot
Match: A0A7S0AWY2_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AWY2_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.130e-37 Identity = 82/149 (55.03%), Postives = 103/149 (69.13%), Query Frame = 3
Query: 297 IAQTVFGQDTRPVLLYDGVCNMCNSFVNLALDIDTDAQVRFSALQSQTGRALLSLSGRSPEDISSIVLVEANGDAHIQSDAVLRLGRVLGG---PVGLAMFPG----VLIPKFVRNKMYDTVADNRYSVLGKREECRCSDER-YADRFI 719
+ VF D RPV+L+DGVCNMCN VNLALD D DA++RFSALQS GRALL +GR +DISSIVLV ++G A I+SDA+LR+ L P+ LA L+PKF+R+ +YD VADNRYS+LG R+ECR DE + RF+
Sbjct: 59 VLSRVFATDKRPVILFDGVCNMCNGAVNLALDYDPDAKLRFSALQSNVGRALLQTNGRDADDISSIVLVTSDG-AFIKSDAILRITEELTPSWLPLPLAKPAARAGRALVPKFLRDLIYDGVADNRYSILGMRDECRFGDENEFTARFV 206
BLAST of mRNA_S-dermatodea_contig11283.817.1 vs. uniprot
Match: A0A176VXX5_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VXX5_MARPO) HSP 1 Score: 149 bits (375), Expect = 3.170e-37 Identity = 74/144 (51.39%), Postives = 98/144 (68.06%), Query Frame = 3
Query: 288 LEGIAQTVFGQDTRPVLLYDGVCNMCNSFVNLALDIDTDAQVRFSALQSQTGRALLSLSGRSPEDISSIVLVEANGDAHIQSDAVLRLGRVLGGPVGLAMFPGVLIPKFVRNKMYDTVADNRYSVLGKREECRCSDERYADRFI 719
L+ F DTRP++L+DGVCNMCN VN LD D + +VRF+ALQS+ GRALL+ SGRSP+DISS+VLV+ A+I+SDA+L R L P ++P F+R+ +YD VADNRYSV G+ CR SD R+ +RF+
Sbjct: 118 LKAKGDAYFATDTRPIILFDGVCNMCNGAVNFMLDNDAEGKVRFAALQSEAGRALLARSGRSPDDISSVVLVDQER-AYIKSDAILNTLRYLQFPFPPVAMAASIVPLFLRDVVYDQVADNRYSVFGRTIACRLSDSRFEERFL 260
BLAST of mRNA_S-dermatodea_contig11283.817.1 vs. uniprot
Match: L1K1V9_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K1V9_GUITC) HSP 1 Score: 145 bits (365), Expect = 3.980e-37 Identity = 76/147 (51.70%), Postives = 100/147 (68.03%), Query Frame = 3
Query: 297 IAQTVFGQDTRPVLLYDGVCNMCNSFVNLALDIDTDAQVR----FSALQSQTGRALLSLSGRSPEDISSIVLVEANGDAHIQSDAVLRLGRVLGGPVGLAM--FPGVLIPKFVRNKMYDTVADNRYSVLGKREECRCSDERYADRFI 719
I + VF +D+RPV+LYDGVCN+CN VN LD D Q+R F+ALQS+ GRALL GR P+DISSIVL +G +++S+A+LR+G+V PV FPG P+ VR+ YD VADNRY+ G +ECR SDER+ +RF+
Sbjct: 9 IVRKVFEKDSRPVILYDGVCNLCNGGVNFMLDWDNPTQLRGNFRFAALQSEVGRALLQRGGRRPDDISSIVLACEDGKTYVKSEAILRIGKVCNQPVRFPSDSFPGPW-PRNVRDVFYDFVADNRYNFFGISDECRLSDERFDNRFV 154
BLAST of mRNA_S-dermatodea_contig11283.817.1 vs. uniprot
Match: A0A7S0XHX8_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0XHX8_9CHLO) HSP 1 Score: 147 bits (370), Expect = 4.120e-37 Identity = 73/137 (53.28%), Postives = 99/137 (72.26%), Query Frame = 3
Query: 312 FGQDTRPVLLYDGVCNMCNSFVNLALDIDTDAQVRFSALQSQTGRALLSLSGRSPEDISSIVLVEANGDAHIQSDAVLRLGRVLGGPV-GLAMFPGVLIPKFVRNKMYDTVADNRYSVLGKREECRCSDERYADRFI 719
F D RP++L+DGVCN+CN VNLALD+D ++RF+ALQS GR LL +GR P DISSIVLVE N +A+ +SDAVLR+ L P+ A G L+P+F+R+ +YD VADNRY +LG ++ CR D+R+ +RF+
Sbjct: 77 FATDKRPIILFDGVCNLCNGGVNLALDLDPPGKLRFAALQSDAGRQLLVRAGRDPTDISSIVLVEEN-NAYTKSDAVLRIATYLENPLLPAAGALGPLVPQFLRDAVYDAVADNRYELLGIQDSCRLGDDRFDERFV 212
BLAST of mRNA_S-dermatodea_contig11283.817.1 vs. uniprot
Match: A0A1Y1IS12_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IS12_KLENI) HSP 1 Score: 145 bits (367), Expect = 5.590e-37 Identity = 69/136 (50.74%), Postives = 97/136 (71.32%), Query Frame = 3
Query: 312 FGQDTRPVLLYDGVCNMCNSFVNLALDIDTDAQVRFSALQSQTGRALLSLSGRSPEDISSIVLVEANGDAHIQSDAVLRLGRVLGGPVGLAMFPGVLIPKFVRNKMYDTVADNRYSVLGKREECRCSDERYADRFI 719
F +D RPV+L+DGVCN+CN+ VN LD D +RFSALQS+ GRALL +GR P+DI+SIVLVE N +I+S+A+L + + L P+ G+++P F R+K Y+ +A NRYS++GKR CR D+R+ DRF+
Sbjct: 55 FAKDKRPVILFDGVCNLCNNGVNFMLDHDPKGNLRFSALQSEAGRALLRRAGRDPQDITSIVLVEPN-KCYIRSEAILHIAQYLHQPLIAFGHLGLIVPGFFRDKFYNLIAYNRYSIMGKRNMCRIGDQRFVDRFV 189
BLAST of mRNA_S-dermatodea_contig11283.817.1 vs. uniprot
Match: A0A7S2E5B0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E5B0_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.190e-36 Identity = 79/162 (48.77%), Postives = 109/162 (67.28%), Query Frame = 3
Query: 252 PTELEVADETTRLEGIAQTVFGQDTRPVLLYDGVCNMCNSFVNLALDIDTDAQVRFSALQSQTGRALLSLSGRSPEDISSIVLVEANGDAHIQSDAVLRLGRVLGGPVGLAMFPG-----VLIPKFVRNKMYDTVADNRYSVLGKREECRCS-DERYADRFI 719
P +E+ + TT I + VF D RP++L+DGVCN+CN+ VN+ALD D ++RF+ALQS GRALL +GR +DISSIVLV G A+I+SDA+L++ L L + P VL+PKF+R+ +YD VADNRY ++GKREECR D ++RF+
Sbjct: 52 PQNIELDNPTT----IQKRVFQNDNRPIILFDGVCNLCNNAVNIALDWDPSGKLRFAALQSNVGRALLQANGRQADDISSIVLVTDEG-AYIKSDAILKITEALTPLSMLPLKPAAVLGRVLVPKFIRDVIYDGVADNRYDLMGKREECRYDVDGSLSERFV 208 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11283.817.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11283.817.1 >prot_S-dermatodea_contig11283.817.1 ID=prot_S-dermatodea_contig11283.817.1|Name=mRNA_S-dermatodea_contig11283.817.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=222bp MNSLDIVRTGIVRRLVHGTSMLTVMLAALVTMSTVVSSFIVAPHIVRGRRback to top mRNA from alignment at S-dermatodea_contig11283:3463..6421+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11283.817.1 ID=mRNA_S-dermatodea_contig11283.817.1|Name=mRNA_S-dermatodea_contig11283.817.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2959bp|location=Sequence derived from alignment at S-dermatodea_contig11283:3463..6421+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11283:3463..6421+ >mRNA_S-dermatodea_contig11283.817.1 ID=mRNA_S-dermatodea_contig11283.817.1|Name=mRNA_S-dermatodea_contig11283.817.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1332bp|location=Sequence derived from alignment at S-dermatodea_contig11283:3463..6421+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |