mRNA_S-dermatodea_contig11275.814.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11275.814.1 vs. uniprot
Match: D7FV68_ECTSI (Probable chromatin remodelling complex ATPase chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV68_ECTSI) HSP 1 Score: 436 bits (1121), Expect = 4.510e-140 Identity = 214/231 (92.64%), Postives = 221/231 (95.67%), Query Frame = 1
Query: 1 EQWFNLEIDDKEAKEQIIHQLHKILRPFMLRRLKADVEKSLPPKTETILYVGEFTAGWLSSKQKEVYRNVLLRDIDMVNGTAGGGSAGRTVILNIVMQLRKCCNHPYLFAGVEDRKLDPLGDHLVLSCGKMVLLDKLLAKLYAKGHRVLIFTQMTKMLDIFEDFCVMRRYEYCRIDGNTSYESREDCIDAYNKPESTKFVFMLSTRAGGLGINLQTADTVILYDSDWNPQA 693
+QWFNLEIDDKEAKE IIHQLHKILRPFMLRRLKADVEKSLPPKTETILYVG LSSKQKEVYRNVLLRDIDMVNGT GGG+AGRTVILNIVMQLRKCCNHPYLFAGVEDRKLDPLGDHL+++CGKMVLLDKLL KL+ KGHRVLIFTQMTKMLDIFEDFCVMRRYEYCRIDGNTSYESREDCIDAYNKP+STKFVFMLSTRAGGLGINLQTADTVILYDSDWNPQA
Sbjct: 447 DQWFNLEIDDKEAKENIIHQLHKILRPFMLRRLKADVEKSLPPKTETILYVG------LSSKQKEVYRNVLLRDIDMVNGTGGGGNAGRTVILNIVMQLRKCCNHPYLFAGVEDRKLDPLGDHLIINCGKMVLLDKLLKKLFDKGHRVLIFTQMTKMLDIFEDFCVMRRYEYCRIDGNTSYESREDCIDAYNKPDSTKFVFMLSTRAGGLGINLQTADTVILYDSDWNPQA 671
BLAST of mRNA_S-dermatodea_contig11275.814.1 vs. uniprot
Match: A0A835YGX5_9STRA (Putative chromatin remodelling complex ATPase chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGX5_9STRA) HSP 1 Score: 383 bits (984), Expect = 1.130e-120 Identity = 188/232 (81.03%), Postives = 208/232 (89.66%), Query Frame = 1
Query: 1 EQWFNLEIDDKEAKEQIIHQLHKILRPFMLRRLKADVEKSLPPKTETILYVGEFTAGWLSSKQKEVYRNVLLRDIDMVNGTAGGG-SAGRTVILNIVMQLRKCCNHPYLFAGVEDRKLDPLGDHLVLSCGKMVLLDKLLAKLYAKGHRVLIFTQMTKMLDIFEDFCVMRRYEYCRIDGNTSYESREDCIDAYNKPESTKFVFMLSTRAGGLGINLQTADTVILYDSDWNPQA 693
++WFNLEIDDKEAKE++I QLHKILRPFMLRRLKADVEKSLPPK ETIL+VG +S KQKEVYRN+LLRDID VNGT GGG +AGRT ILNIVMQLRKCCNHPYLFAGVEDR DPLG+HL+ +CGKMVLL KLL KL +G+RVLIF+QMT+MLDI EDFC+MRRYEYCRIDG+TSYE RED IDAYN+P S+KF+FMLSTRAGGLGINLQTADTVILYDSDWNPQA
Sbjct: 477 DEWFNLEIDDKEAKERMIQQLHKILRPFMLRRLKADVEKSLPPKNETILFVG------MSYKQKEVYRNILLRDIDAVNGTGGGGGAAGRTAILNIVMQLRKCCNHPYLFAGVEDRSQDPLGEHLIQNCGKMVLLSKLLGKLKERGNRVLIFSQMTRMLDILEDFCLMRRYEYCRIDGSTSYEDREDFIDAYNRPNSSKFIFMLSTRAGGLGINLQTADTVILYDSDWNPQA 702
BLAST of mRNA_S-dermatodea_contig11275.814.1 vs. uniprot
Match: A0A4Q3BVS4_9BACT (DEAD/DEAH box helicase n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q3BVS4_9BACT) HSP 1 Score: 325 bits (833), Expect = 3.230e-107 Identity = 158/226 (69.91%), Postives = 183/226 (80.97%), Query Frame = 1
Query: 7 WFNLEIDDKEAKEQIIHQLHKILRPFMLRRLKADVEKSLPPKTETILYVGEFTAGWLSSKQKEVYRNVLLRDIDMVNGTAGGGSA-GRTVILNIVMQLRKCCNHPYLFAGVEDRKLDPLGDHLVLSCGKMVLLDKLLAKLYAKGHRVLIFTQMTKMLDIFEDFCVMRRYEYCRIDGNTSYESREDCIDAYNKPESTKFVFMLSTRAGGLGINLQTADTVILYDSDW 681
WFNL++DD AK+++I QLHK+LRPFMLRRLKADVE SLPPK+ETIL+ G +S+ QK +YR +LLRDID +N S RT ILNIVMQLRKCCNHPYLF VEDR LDPLGDHL +CGKMVL+DKLL K+ +GHRVLIF+QMT+MLDI ED+ + R Y YCRIDGNTSYE RED I+ +N+P S KFVF+LSTRAGGLGINLQTADTVILYDSDW
Sbjct: 229 WFNLDVDDTAAKQRMISQLHKLLRPFMLRRLKADVESSLPPKSETILFTG------MSTLQKTLYRQILLRDIDTINSAGSSNSQQSRTAILNIVMQLRKCCNHPYLFPSVEDRSLDPLGDHLFANCGKMVLMDKLLRKMKERGHRVLIFSQMTRMLDIMEDYLISRDYRYCRIDGNTSYEEREDRIEDFNRPNSDKFVFILSTRAGGLGINLQTADTVILYDSDW 448
BLAST of mRNA_S-dermatodea_contig11275.814.1 vs. uniprot
Match: F0Y4E7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4E7_AURAN) HSP 1 Score: 330 bits (847), Expect = 1.900e-106 Identity = 159/234 (67.95%), Postives = 191/234 (81.62%), Query Frame = 1
Query: 1 EQWFNLEIDDKEAKEQIIHQLHKILRPFMLRRLKADVEKSLPPKTETILYVGEFTAGWLSSKQKEVYRNVLLRDIDMVNGTAGGGS---AGRTVILNIVMQLRKCCNHPYLFAGVEDRKLDPLGDHLVLSCGKMVLLDKLLAKLYAKGHRVLIFTQMTKMLDIFEDFCVMRRYEYCRIDGNTSYESREDCIDAYNKPESTKFVFMLSTRAGGLGINLQTADTVILYDSDWNPQA 693
++WF+L+++D++AK+ +I QLHK+LRPF+LRRLK DVEKSLPPKTETIL+ G LS QK+VY+++L RD ++ G GG A R + NI MQLRKCCNHPYLF GVEDR LDPLGDH+V +CGK+VLLDKLLAKL +GHRVL+F+QMT +LD+ EDF MR YEYCRIDGNTSYE R+D I+AYN P S KFVF+LSTRAGGLGINLQTADTV+LYDSDWNPQA
Sbjct: 318 DEWFDLDVEDEDAKKTMITQLHKLLRPFVLRRLKVDVEKSLPPKTETILFTG------LSVSQKQVYKSLLKRDASLLAGPEAGGDRAGASRAKMANIAMQLRKCCNHPYLFQGVEDRNLDPLGDHVVANCGKLVLLDKLLAKLKDRGHRVLVFSQMTALLDVLEDFMAMRDYEYCRIDGNTSYEERDDLIEAYNAPNSDKFVFLLSTRAGGLGINLQTADTVVLYDSDWNPQA 545
BLAST of mRNA_S-dermatodea_contig11275.814.1 vs. uniprot
Match: A0A7S3HIT7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIT7_9STRA) HSP 1 Score: 335 bits (859), Expect = 2.260e-104 Identity = 160/230 (69.57%), Postives = 194/230 (84.35%), Query Frame = 1
Query: 7 WFNLEIDDKEAKEQIIHQLHKILRPFMLRRLKADVEKSLPPKTETILYVGEFTAGWLSSKQKEVYRNVLLRDIDMVNGTAGGGSAG-RTVILNIVMQLRKCCNHPYLFAGVEDRKLDPLGDHLVLSCGKMVLLDKLLAKLYAKGHRVLIFTQMTKMLDIFEDFCVMRRYEYCRIDGNTSYESREDCIDAYNKPESTKFVFMLSTRAGGLGINLQTADTVILYDSDWNPQA 693
WFNL++DD EAK+++I QLHK+LRPFMLRRLKADVEKSLPPK+ETIL+ G +S+ QK +YR+VL+RDID +NG + S G RT ILNIVMQLRKCCNHPYLF GVEDR DP+G+HL ++CGKMVLL KLL K+ +GHRVL+F+QMT+M+DI ED+ + + Y+YCRIDGNTSYE RED I +N+P+S KF+F+LSTRAGGLGINLQTADTVILYDSDWNPQA
Sbjct: 152 WFNLDVDDNEAKQRMIGQLHKLLRPFMLRRLKADVEKSLPPKSETILFTG------MSAVQKNLYRSVLMRDIDTINGASTTNSNGSRTAILNIVMQLRKCCNHPYLFPGVEDRAQDPMGEHLYMNCGKMVLLHKLLGKMKERGHRVLVFSQMTRMIDILEDYMISQGYQYCRIDGNTSYEDREDRIADFNRPDSDKFIFVLSTRAGGLGINLQTADTVILYDSDWNPQA 375
BLAST of mRNA_S-dermatodea_contig11275.814.1 vs. uniprot
Match: M4C6I8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C6I8_HYAAE) HSP 1 Score: 329 bits (844), Expect = 5.090e-104 Identity = 162/229 (70.74%), Postives = 190/229 (82.97%), Query Frame = 1
Query: 7 WFNLEIDDKEAKEQIIHQLHKILRPFMLRRLKADVEKSLPPKTETILYVGEFTAGWLSSKQKEVYRNVLLRDIDMVNGTAGGGSAGRTVILNIVMQLRKCCNHPYLFAGVEDRKLDPLGDHLVLSCGKMVLLDKLLAKLYAKGHRVLIFTQMTKMLDIFEDFCVMRRYEYCRIDGNTSYESREDCIDAYNKPESTKFVFMLSTRAGGLGINLQTADTVILYDSDWNPQA 693
WFNL++DD EAK+Q+I QLHKILRPFMLRRLKADVEKSLPPK ET+L++G +S QK +Y+++LLRD++ V G AGG S R+ + NIVMQLRKCC HPYLF G EDR LDPLG+H+V +CGKMVL+DKLL KL +G RVLIFTQMT++LDI EDFC MR+YEYCRIDG TSYE RE ID +N PES+KF+F+LSTRAGGLGINL TAD VILYDSDWNPQA
Sbjct: 317 WFNLDVDDDEAKKQMISQLHKILRPFMLRRLKADVEKSLPPKKETLLFIG------MSEMQKVLYKSLLLRDLNTVMGGAGGVS--RSALQNIVMQLRKCCGHPYLFEGQEDRSLDPLGEHVVHNCGKMVLMDKLLKKLKQRGSRVLIFTQMTRVLDIMEDFCRMRQYEYCRIDGQTSYEVRESSIDEFNHPESSKFLFLLSTRAGGLGINLYTADVVILYDSDWNPQA 537
BLAST of mRNA_S-dermatodea_contig11275.814.1 vs. uniprot
Match: W7TKM9_9STRA (Putative chromatin remodelling complex atpase chain (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKM9_9STRA) HSP 1 Score: 324 bits (830), Expect = 2.970e-103 Identity = 158/229 (69.00%), Postives = 184/229 (80.35%), Query Frame = 1
Query: 7 WFNLEIDDKEAKEQIIHQLHKILRPFMLRRLKADVEKSLPPKTETILYVGEFTAGWLSSKQKEVYRNVLLRDIDMVNGTAGGGSAGRTVILNIVMQLRKCCNHPYLFAGVEDRKLDPLGDHLVLSCGKMVLLDKLLAKLYAKGHRVLIFTQMTKMLDIFEDFCVMRRYEYCRIDGNTSYESREDCIDAYNKPESTKFVFMLSTRAGGLGINLQTADTVILYDSDWNPQA 693
WFNLEIDD E K+++I QLHKILRPFMLRRLKADVEKSLP KTET+++ + Q++ Y+ +L RD+ ++ AG +AGRT +LN+VMQLRK CNHPYLF GVEDR LDPLGDH++ +CGKM LLDKLL KL KGHRVL+F QMT+MLDI EDF MR + YCRIDGNTSYE RE+ ID YN P S+KF F+LSTRAGGLGINLQTADTVILYDSDWNPQA
Sbjct: 458 WFNLEIDDAEQKQRLITQLHKILRPFMLRRLKADVEKSLPKKTETLVFCE------MMPTQRDTYKKILERDLSVI---AGSETAGRTAVLNLVMQLRKACNHPYLFTGVEDRTLDPLGDHVIKNCGKMYLLDKLLKKLKEKGHRVLVFCQMTRMLDILEDFMYMRGHSYCRIDGNTSYEERENLIDTYNAPNSSKFAFLLSTRAGGLGINLQTADTVILYDSDWNPQA 677
BLAST of mRNA_S-dermatodea_contig11275.814.1 vs. uniprot
Match: A0A0W8D9Y4_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D9Y4_PHYNI) HSP 1 Score: 328 bits (840), Expect = 5.950e-103 Identity = 161/229 (70.31%), Postives = 188/229 (82.10%), Query Frame = 1
Query: 7 WFNLEIDDKEAKEQIIHQLHKILRPFMLRRLKADVEKSLPPKTETILYVGEFTAGWLSSKQKEVYRNVLLRDIDMVNGTAGGGSAGRTVILNIVMQLRKCCNHPYLFAGVEDRKLDPLGDHLVLSCGKMVLLDKLLAKLYAKGHRVLIFTQMTKMLDIFEDFCVMRRYEYCRIDGNTSYESREDCIDAYNKPESTKFVFMLSTRAGGLGINLQTADTVILYDSDWNPQA 693
WFNL++DD EAK+Q+I QLHKILRPFMLRRLKADVEKSLPPK ET+L+VG +S QK +Y+++LLRD++ + G GG S ++ + NIVMQLRKCC HPYLF G EDR LDPLG+H+V +CGKMVLLDKLL KL +G RVLIFTQMT++LDI EDFC MR Y+YCRIDG TSYE RE ID YNKP S+KF+F+LSTRAGGLGINL TAD VILYDSDWNPQA
Sbjct: 446 WFNLDVDDDEAKKQMISQLHKILRPFMLRRLKADVEKSLPPKKETLLFVG------MSEMQKALYKSLLLRDMNTIMGGTGGVS--KSALQNIVMQLRKCCGHPYLFEGQEDRSLDPLGEHVVENCGKMVLLDKLLKKLKQRGSRVLIFTQMTRVLDIMEDFCRMRLYDYCRIDGQTSYEDRESSIDEYNKPNSSKFLFLLSTRAGGLGINLYTADVVILYDSDWNPQA 666
BLAST of mRNA_S-dermatodea_contig11275.814.1 vs. uniprot
Match: F0W8L4_9STRA (Uncharacterized protein AlNc14C35G3140 n=2 Tax=Albugo TaxID=65356 RepID=F0W8L4_9STRA) HSP 1 Score: 334 bits (856), Expect = 7.590e-103 Identity = 163/231 (70.56%), Postives = 192/231 (83.12%), Query Frame = 1
Query: 1 EQWFNLEIDDKEAKEQIIHQLHKILRPFMLRRLKADVEKSLPPKTETILYVGEFTAGWLSSKQKEVYRNVLLRDIDMVNGTAGGGSAGRTVILNIVMQLRKCCNHPYLFAGVEDRKLDPLGDHLVLSCGKMVLLDKLLAKLYAKGHRVLIFTQMTKMLDIFEDFCVMRRYEYCRIDGNTSYESREDCIDAYNKPESTKFVFMLSTRAGGLGINLQTADTVILYDSDWNPQA 693
++WFNL++DD EAK+Q+I QLHKILRPFMLRRLKADVEKSLPPK ET+L+VG +S QK +Y+++LLRD+D + G G G R+ + NIVMQLRKCC HPYLF G EDR LDPLGDH+V +CGKMVLLDKLL KL +G RVL+FTQMT++LDIFEDFC MR+YEYCRIDG TSYE RE I+AYN+ +S+KFVF+LSTRAGGLGINL TAD VILYDSDWNPQA
Sbjct: 451 DEWFNLDVDDDEAKKQMIGQLHKILRPFMLRRLKADVEKSLPPKKETLLFVG------MSLMQKALYKSLLLRDMDTITGKVGAG-VSRSALQNIVMQLRKCCGHPYLFEGQEDRTLDPLGDHVVENCGKMVLLDKLLKKLKQRGSRVLLFTQMTRVLDIFEDFCRMRKYEYCRIDGRTSYEDRESAIEAYNELDSSKFVFLLSTRAGGLGINLYTADIVILYDSDWNPQA 674
BLAST of mRNA_S-dermatodea_contig11275.814.1 vs. uniprot
Match: B7G256_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G256_PHATC) HSP 1 Score: 334 bits (856), Expect = 1.290e-102 Identity = 162/231 (70.13%), Postives = 192/231 (83.12%), Query Frame = 1
Query: 1 EQWFNLEIDDKEAKEQIIHQLHKILRPFMLRRLKADVEKSLPPKTETILYVGEFTAGWLSSKQKEVYRNVLLRDIDMVNGTAGGGSAGRTVILNIVMQLRKCCNHPYLFAGVEDRKLDPLGDHLVLSCGKMVLLDKLLAKLYAKGHRVLIFTQMTKMLDIFEDFCVMRRYEYCRIDGNTSYESREDCIDAYNKPESTKFVFMLSTRAGGLGINLQTADTVILYDSDWNPQA 693
++WFNL+I+D + K ++I QLHKILRPFMLRRLKADVEKSLPPK ETIL+ G +S+ QK++YR++L+RDID V GT+G RT ILNIVMQLRKC HPYLF G EDR L PLG+HLV +CGKMV+LDKLL +L+ +GHRVL+FTQMT++LDI ED+ VMRR+ YCRIDGNTSYE RE+ IDAYN P S KF+F+LSTRAGGLGINLQTAD VILYDSDWNPQA
Sbjct: 513 DEWFNLDIEDNDEKNKLISQLHKILRPFMLRRLKADVEKSLPPKHETILFTG------MSAMQKKLYRDILIRDIDAVQGTSGS----RTAILNIVMQLRKCAGHPYLFPGTEDRSLPPLGEHLVENCGKMVVLDKLLKRLHERGHRVLLFTQMTRVLDIMEDYLVMRRFPYCRIDGNTSYEQREEYIDAYNAPNSEKFIFLLSTRAGGLGINLQTADVVILYDSDWNPQA 733 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11275.814.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11275.814.1 >prot_S-dermatodea_contig11275.814.1 ID=prot_S-dermatodea_contig11275.814.1|Name=mRNA_S-dermatodea_contig11275.814.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=234bp EQWFNLEIDDKEAKEQIIHQLHKILRPFMLRRLKADVEKSLPPKTETILYback to top mRNA from alignment at S-dermatodea_contig11275:3649..6758- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11275.814.1 ID=mRNA_S-dermatodea_contig11275.814.1|Name=mRNA_S-dermatodea_contig11275.814.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3110bp|location=Sequence derived from alignment at S-dermatodea_contig11275:3649..6758- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11275:3649..6758- >mRNA_S-dermatodea_contig11275.814.1 ID=mRNA_S-dermatodea_contig11275.814.1|Name=mRNA_S-dermatodea_contig11275.814.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1404bp|location=Sequence derived from alignment at S-dermatodea_contig11275:3649..6758- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |