mRNA_S-dermatodea_contig11255.806.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11255.806.1
Unique NamemRNA_S-dermatodea_contig11255.806.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig11255.806.1 vs. uniprot
Match: D7G5C5_ECTSI (DUF1394 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5C5_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 3.180e-85
Identity = 136/191 (71.20%), Postives = 158/191 (82.72%), Query Frame = 1
Query:   19 LDLQRCSDAIRIAQEYEGCGMIIRQSMSAPGDEELQRATSRALLPNVEGIRTFFEVSRDMEQSVPILLRRLVELDSIVERPLLVCKLTELLQAVLEWDQLKMMRPQIQNDFASYRRHLPRMKREHEEGLLPQLPVVDTDANAISMFIAENVPFMVTLARATAETAREVPRVVNVIATVANMCCGMVQRRLY 591
            L ++RCSDAI+  Q+YEGC  +IRQSMSAP D ELQ A + ALLPNV+ I+TFF+++RD+EQ  P LL RL  L SIVE PLL C LTELLQAVLEWDQ+KMMRPQ+QNDFA+YRR+L R+KRE E GLL +LPV DTDANAISMFIAENVP MV L++ TA+TA EVPRV NVIATVANMCCGMV RR +
Sbjct:   56 LVVERCSDAIQSVQQYEGCSALIRQSMSAPKDTELQSAVTEALLPNVKKIKTFFDLARDVEQLAPALLGRLAGLGSIVEAPLLACMLTELLQAVLEWDQIKMMRPQVQNDFATYRRYLSRLKREQEAGLLLELPVADTDANAISMFIAENVPMMVMLSKVTAKTAEEVPRVQNVIATVANMCCGMVHRRAH 246          
BLAST of mRNA_S-dermatodea_contig11255.806.1 vs. uniprot
Match: A0A7S4DWY5_9EUKA (Hypothetical protein n=2 Tax=Lotharella TaxID=74819 RepID=A0A7S4DWY5_9EUKA)

HSP 1 Score: 114 bits (285), Expect = 3.780e-27
Identity = 63/194 (32.47%), Postives = 115/194 (59.28%), Query Frame = 1
Query:   25 LQRCSDAIRIAQEYEGCGMIIRQSMSAPGDEELQRATSRALLPNVEGIRTFFEVSRDMEQSVPILLRRLVE-----LDSIVERPLLVCKLTELLQAVLEWDQLKMMRPQIQNDFASYRRHLPRMKREHEEGLLPQLPVVDTDANAISMFIAENVPFMVTLARATAETAREVPRVVNVIATVANMCCGMVQRRLY 591
            L +C   + +  EY+ C  +  ++MS+P +E  ++A S ALL +V+ ++ F++ S D+++ VP+LL  L +       ++ ++  LV +   +L  VL +DQ++MMRP + NDF+ YRR+LP+  R       P + V   +A+A+++F A + P MV+L+ ATAE   +   V N ++ +AN C  M++ + +
Sbjct:   59 LDQCPKVLSLINEYKDCTQLCSKAMSSPSEESEEKAFS-ALLKSVKSVKVFYDFSNDLKKCVPVLLNELSKPAEETKQTLQDQQALVKQFANILDFVLTFDQIRMMRPHLSNDFSYYRRYLPKFSRR------PDIDVKADEASAMALFTARHCPMMVSLSSATAECLEQNRHVTNAMSAMANACLAMLKNKRF 245          
BLAST of mRNA_S-dermatodea_contig11255.806.1 vs. uniprot
Match: A0A210Q409_MIZYE (Protein FAM49B n=2 Tax=Pectinidae TaxID=6566 RepID=A0A210Q409_MIZYE)

HSP 1 Score: 99.4 bits (246), Expect = 1.770e-21
Identity = 68/197 (34.52%), Postives = 103/197 (52.28%), Query Frame = 1
Query:   19 LDLQRCSDAIRIAQEYEGCGMIIRQSMSAPGDEELQRATSRALLPNVEGIRTFFEVSRDMEQSVPILLRRL-----VELDSIVERPLLVCKLTELLQAVLEWDQLKMMRPQIQNDFASYRRHLPRMKREHEEGLLPQLPVVDTDANAISMFIAENVPFMVTLARATAETA---REVP--RVVNVIATVANMCCGMVQ 579
            L L      +R  Q Y G    IRQ++S P ++ELQ+    ++ P VE ++T+FE S  +E  VP+LL  L     V L+ +  +  L  +  E+L  VL +D LKM  P IQNDF+ YRR L RMK  +E+    +  V +  AN +S+F A   P +  L+ AT       +E+P       +  +AN+C  M++
Sbjct:   41 LVLNEGQSILRSVQSYAGAADAIRQAISNPSNDELQKTAWSSVCPLVEKLKTYFEFSAQLEHVVPVLLSDLCSNDMVPLEHLESQQALFKQFAEILDFVLRFDDLKMTNPSIQNDFSYYRRTLSRMKMANEDDSHTENVVSNEMANRMSLFYANATPMLKVLSDATTRFVTQNKELPVENTTECLGAMANICRVMIE 237          
BLAST of mRNA_S-dermatodea_contig11255.806.1 vs. uniprot
Match: A0A835YT34_9STRA (DUF1394 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT34_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 9.450e-21
Identity = 76/189 (40.21%), Postives = 94/189 (49.74%), Query Frame = 1
Query:   43 AIRIAQEYEGCGMIIRQSMSAPGDEELQRATSRALLPNVEGIRTFFEVSRDMEQSVPILLRRLVELDS-------IVERPLLVCKLTELLQAVL--EWDQLKMMRPQIQNDFASYRRHLPRMKREHEEGLLPQLPVVDTDANAISMFIAENVPFMVTLARATAETAREVPRVVNVIATVANMCCGMVQR 582
            A+     Y GC  +IR SMSAPGD   QRA   ALLPNV+ I +    S+           +LV            VE    VC  +  LQ      +D+L  +  QIQNDFA Y+R +PRM    +   L QL V D  A  ISMFIAEN+P  V L+ A  +      R  N+IA VAN+CCG V R
Sbjct:   41 ALEAVNAYTGCADVIRHSMSAPGDHSAQRAAFDALLPNVDRIASLHATSQASSSE------KLVGYGGGEHFHFFAVEEMRGVCAPSYTLQRTHFDHYDRLVTL-SQIQNDFAFYKRLMPRMVASSDY-TLEQLTVSDRHAGTISMFIAENMPLTVALSTALRDNTTA-SRTANIIAQVANLCCGTVAR 220          
BLAST of mRNA_S-dermatodea_contig11255.806.1 vs. uniprot
Match: A0A0G4IKW3_PLABS (DUF1394 domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IKW3_PLABS)

HSP 1 Score: 96.3 bits (238), Expect = 1.950e-20
Identity = 66/192 (34.38%), Postives = 104/192 (54.17%), Query Frame = 1
Query:   25 LQRCSDAIRIAQEYEGCGMIIRQSMSAPGDEELQRATSRALLPNVEGIRTFFEVSRDMEQSVPILLRRLV---ELDSIVERPLLVCKLTELLQAVLEWDQLKMMRPQIQNDFASYRRHLPRMKREHEEGLLPQLPVVDTDANAISMFIAENVPFMVTLARATAETAREVPRVVNVIATVANMCCGMVQRRLY 591
            L+R    I   + Y  CG  IR+++S P  +  Q A  +A+  NV  I  FF  S+++   V  LL+ L    E ++       V +L  LL  VL +D+LKM+RP IQNDF+ YRR LP+   +      P L V D +A+ IS++IA+ +P M  LA++T+      P V   +A +AN+C  +++ + +
Sbjct:   42 LERAPGVIAALEAYANCGAQIRKALSDPNPKSEQEAF-QAVKANVAIINMFFNFSKEVANMVRELLKTLATGQEKEAFCAHQFSVKQLGRLLDFVLRFDELKMLRPGIQNDFSYYRRVLPKHSND------PDLKVRDEEASFISLYIAQPIPMMTALAKSTSSLYVSNPNVPAALALMANVCLELLKSKRF 226          
BLAST of mRNA_S-dermatodea_contig11255.806.1 vs. uniprot
Match: A0A6M2DEX0_9NEOP (DUF1394 domain-containing protein n=3 Tax=Pulicidae TaxID=7511 RepID=A0A6M2DEX0_9NEOP)

HSP 1 Score: 89.4 bits (220), Expect = 9.220e-18
Identity = 66/193 (34.20%), Postives = 106/193 (54.92%), Query Frame = 1
Query:   31 RCSDAI-RIAQEYEGCGMIIRQSMSAPGDEELQRATSRALLPNVEGIRTFFEVSRDMEQSVPILLRRLV-----ELDSIVERPLLVCKLTELLQAVLEWDQLKMMRPQIQNDFASYRRHLPRMKREHEEGLLPQLPVVDTDANAISMFIAENVPFMVTLARAT----AETAREVPRVVNVIATVANMCCGMVQ 579
            R SD I    Q Y+G G  +R+++S P  E L+RA  + +LP VE +R  +E S ++E++VP LL +LV         +  +  LV +L E+L+ VL++D+ KM  P IQNDF+ YRR + R +  H+    P+L V    AN +S+F A   P +  L+ +     AE   ++      + T+A +C  M++
Sbjct:   48 RASDRILEEIQSYKGAGKEVREAISDPNPECLERAW-KTILPLVEKLRYCYEHSVELEKAVPHLLEKLVGGEWSPTQHLETQQALVKQLAEILEFVLKFDEYKMKTPAIQNDFSYYRRVVSRQRNTHDSES-PELLVSVELANKMSLFYAHATPMLKVLSESVSKFVAEHESDIENTTETLGTMAKVCLRMLE 238          
BLAST of mRNA_S-dermatodea_contig11255.806.1 vs. uniprot
Match: A0A1J1HU61_9DIPT (CLUMA_CG003457, isoform A n=1 Tax=Clunio marinus TaxID=568069 RepID=A0A1J1HU61_9DIPT)

HSP 1 Score: 89.0 bits (219), Expect = 1.280e-17
Identity = 63/185 (34.05%), Postives = 105/185 (56.76%), Query Frame = 1
Query:   58 QEYEGCGMIIRQSMSAPGDEELQRATSRALLPNVEGIRTFFEVSRDMEQSVPILLRRLV-----ELDSIVERPLLVCKLTELLQAVLEWDQLKMMRPQIQNDFASYRRHLPRMKREHEEGLLPQLPVVDTD-ANAISMFIAENVPFMVTLARATA----ETAREVPRVVNVIATVANMCCGMVQR 582
            Q Y+G G  IR+++S P  E L+RA +  +LP VE ++  +E S ++E+ VP LL +LV         +  +  LV +L E+L+ VL++D+ KM  P IQNDF+ YRR + R + ++   +L     + T+ AN +S+F A   P +  L+ AT+    + A +V      I T+A +C  M+++
Sbjct:   61 QVYKGAGKEIREAISDPSSEVLERAWN-VVLPLVEKLKACYEHSLELERIVPKLLSQLVGGRLNPTQHLETQQALVKQLAEILEFVLKFDEYKMKTPAIQNDFSYYRRTVSRQRFDYNNQML-----ISTELANRMSLFYAHATPMLKVLSEATSKFVQDNANDVDNTTETIGTMAKVCLRMLEK 239          
BLAST of mRNA_S-dermatodea_contig11255.806.1 vs. uniprot
Match: A0A2R5G7E3_9STRA (Protein FAM49A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G7E3_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 2.840e-17
Identity = 54/184 (29.35%), Postives = 99/184 (53.80%), Query Frame = 1
Query:   25 LQRCSDAIRIAQEYEGCGMIIRQSMSAPGDEELQRATSRALLPNVEGIRTFFEVSRDMEQSVPILLRRLVELDSIVERPL-----LVCKLTELLQAVLEWDQLKMMRPQIQNDFASYRRHLPRMKREHEEGLLPQLPVVDTDANAISMFIAENVPFMVTLARATAETAREVPRVVNVIATVANM 561
            L+    ++   + Y+    +++Q++ +P D ++++     + PNVEGIR F+E+S ++  +V  +LR +  +      PL     LV KL  L + +  +D  KM +P +QNDF+ YRR L +          P +PV D+ A+AISMF+A+  P +  LA   +  +++   +V  +A  +N+
Sbjct:   43 LEHAEFSLEFLRAYKANDKLVQQALGSPNDPKVRQEAFEGMFPNVEGIRGFYELSSEINSAVGDILRLVAPVAMRGGTPLSSEQALVAKLAALFEVIFLFDWAKMSQPAVQNDFSFYRRELSKNMNN------PNVPVDDSMASAISMFVAQGSPLLTALANDLSLLSKQYRELVPYLADFSNL 220          
BLAST of mRNA_S-dermatodea_contig11255.806.1 vs. uniprot
Match: S4REM1_PETMA (Family with sequence similarity 49 member Ba n=2 Tax=Petromyzon marinus TaxID=7757 RepID=S4REM1_PETMA)

HSP 1 Score: 85.1 bits (209), Expect = 3.190e-16
Identity = 63/200 (31.50%), Postives = 103/200 (51.50%), Query Frame = 1
Query:   25 LQRCSDAIRIAQEYEGCGMIIRQSMSAPGDEELQRATSRALLPNVEGIRTFFEVSRDMEQSVPILLRRLV-----ELDSIVERPLLVCKLTELLQAVLEWDQLKMMRPQIQNDFASYRRHLPRMKREHEEGLLPQLPVVDTDANAISMFIAENVPFMVTLARATAETARE-----VPRVVNVIATVANMCCGMVQRRLYQ 594
            LQ     +   QEY G G  IR+++S PG+E  Q     A+ P V  ++ FFE S+ +++++  LL  L       +  +     L  +  E+L   L++D+LKM  P IQNDF+ YRR L RM R +  G   ++ V +  AN +S+F AE  P + TL+  T    +E     +    + ++T+A +C  M++   Y+
Sbjct:   43 LQGTRSVLSELQEYCGAGNEIREAISNPGNEIFQEKAWNAVCPLVSKLKRFFEFSQRLDRALQSLLVALTCPPLTSMQHLEREQALAKQFAEILHFTLQFDELKMTNPAIQNDFSYYRRTLSRM-RINNMGSDVEMEVNNEMANRMSLFYAEATPMLKTLSDGTTRFVQEHKSLPLENTTDCLSTMARVCKVMLETPEYR 241          
BLAST of mRNA_S-dermatodea_contig11255.806.1 vs. uniprot
Match: A0A0H5RBK7_9EUKA (DUF1394 domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RBK7_9EUKA)

HSP 1 Score: 84.3 bits (207), Expect = 5.110e-16
Identity = 61/193 (31.61%), Postives = 99/193 (51.30%), Query Frame = 1
Query:   25 LQRCSDAIRIAQEYEGCGMIIRQSMSAPGDEELQRATSRALLPNVEGIRTFFEVSRDMEQSVPILLRRLV---ELDSIVERPLLVCKLTELLQAVLEWDQLKMMRPQIQNDFASYRRHLPRMKREHEEGLLPQLPVVDTDANAISMFIAENVPFMVTLARATAETAREVPRVVNVIATVANMCCGMVQRRLYQ 594
            L R      + + Y  CG  IR+++S P  +    A     L NV+ I  F+  S+++   V  LL+ L    E ++       V +   LL  VL +D+LKM RP IQNDF+ YRR L +   +      P + V D +A+ IS++IA+++P M  LA+AT+      P V   +A  +N+C  +++ + +Q
Sbjct:   41 LSRSYRMTEMLEAYCNCGTYIRKALSEPSSKSELEAFLAVKL-NVDVISAFYTYSKEVANIVRDLLKFLATGQEKEAFCSHQYSVKQFGRLLDFVLRFDELKMQRPGIQNDFSYYRRVLAKHAND------PDIKVRDEEASFISLYIAQSIPMMSALAKATSSLYVSNPNVPQALALTSNVCLELLKSKRFQ 226          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11255.806.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5C5_ECTSI3.180e-8571.20DUF1394 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A7S4DWY5_9EUKA3.780e-2732.47Hypothetical protein n=2 Tax=Lotharella TaxID=7481... [more]
A0A210Q409_MIZYE1.770e-2134.52Protein FAM49B n=2 Tax=Pectinidae TaxID=6566 RepID... [more]
A0A835YT34_9STRA9.450e-2140.21DUF1394 domain-containing protein n=1 Tax=Tribonem... [more]
A0A0G4IKW3_PLABS1.950e-2034.38DUF1394 domain-containing protein n=1 Tax=Plasmodi... [more]
A0A6M2DEX0_9NEOP9.220e-1834.20DUF1394 domain-containing protein n=3 Tax=Pulicida... [more]
A0A1J1HU61_9DIPT1.280e-1734.05CLUMA_CG003457, isoform A n=1 Tax=Clunio marinus T... [more]
A0A2R5G7E3_9STRA2.840e-1729.35Protein FAM49A n=1 Tax=Hondaea fermentalgiana TaxI... [more]
S4REM1_PETMA3.190e-1631.50Family with sequence similarity 49 member Ba n=2 T... [more]
A0A0H5RBK7_9EUKA5.110e-1631.61DUF1394 domain-containing protein n=1 Tax=Spongosp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11255contigS-dermatodea_contig11255:5134..7524 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score265.4
Seed ortholog evalue2.2e-68
Seed eggNOG ortholog2880.D7G5C5
Preferred nameFAM49B
GOsGO:0001817,GO:0001819,GO:0001910,GO:0001912,GO:0001914,GO:0001916,GO:0002576,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0002697,GO:0002699,GO:0002703,GO:0002705,GO:0002706,GO:0002708,GO:0002709,GO:0002711,GO:0002819,GO:0002821,GO:0002822,GO:0002824,GO:0003674,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005929,GO:0006810,GO:0006887,GO:0008150,GO:0009987,GO:0012505,GO:0016192,GO:0022407,GO:0022409,GO:0023023,GO:0023025,GO:0023029,GO:0023030,GO:0030141,GO:0030155,GO:0031091,GO:0031093,GO:0031341,GO:0031343,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032649,GO:0032729,GO:0032940,GO:0034774,GO:0042287,GO:0042995,GO:0043226,GO:0043227,GO:0043229,GO:0043233,GO:0044422,GO:0044424,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045055,GO:0045785,GO:0046903,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051249,GO:0051251,GO:0060205,GO:0065007,GO:0070013,GO:0097708,GO:0099503,GO:0120025,GO:1903037,GO:1903039,GO:2000567,GO:2000568
EggNOG free text desc.positive regulation of memory T cell activation
EggNOG OGsKOG3951@1,KOG3951@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size597
Cds size597
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11255.806.1prot_S-dermatodea_contig11255.806.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11255 5134..7524 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924193.8593469-CDS-S-dermatodea_contig11255:5133..52261622924193.8593469-CDS-S-dermatodea_contig11255:5133..5226Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11255 5134..5226 +
1694079082.9801733-CDS-S-dermatodea_contig11255:5133..52261694079082.9801733-CDS-S-dermatodea_contig11255:5133..5226Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11255 5134..5226 +
1622924193.868782-CDS-S-dermatodea_contig11255:5771..58821622924193.868782-CDS-S-dermatodea_contig11255:5771..5882Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11255 5772..5882 +
1694079082.989831-CDS-S-dermatodea_contig11255:5771..58821694079082.989831-CDS-S-dermatodea_contig11255:5771..5882Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11255 5772..5882 +
1622924193.8773751-CDS-S-dermatodea_contig11255:6290..64071622924193.8773751-CDS-S-dermatodea_contig11255:6290..6407Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11255 6291..6407 +
1694079082.9978526-CDS-S-dermatodea_contig11255:6290..64071694079082.9978526-CDS-S-dermatodea_contig11255:6290..6407Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11255 6291..6407 +
1622924193.8858104-CDS-S-dermatodea_contig11255:7006..71501622924193.8858104-CDS-S-dermatodea_contig11255:7006..7150Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11255 7007..7150 +
1694079083.0076091-CDS-S-dermatodea_contig11255:7006..71501694079083.0076091-CDS-S-dermatodea_contig11255:7006..7150Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11255 7007..7150 +
1622924193.8988135-CDS-S-dermatodea_contig11255:7392..75241622924193.8988135-CDS-S-dermatodea_contig11255:7392..7524Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11255 7393..7524 +
1694079083.0170379-CDS-S-dermatodea_contig11255:7392..75241694079083.0170379-CDS-S-dermatodea_contig11255:7392..7524Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11255 7393..7524 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11255.806.1

>prot_S-dermatodea_contig11255.806.1 ID=prot_S-dermatodea_contig11255.806.1|Name=mRNA_S-dermatodea_contig11255.806.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=199bp
MIIAFPLDLQRCSDAIRIAQEYEGCGMIIRQSMSAPGDEELQRATSRALL
PNVEGIRTFFEVSRDMEQSVPILLRRLVELDSIVERPLLVCKLTELLQAV
LEWDQLKMMRPQIQNDFASYRRHLPRMKREHEEGLLPQLPVVDTDANAIS
MFIAENVPFMVTLARATAETAREVPRVVNVIATVANMCCGMVQRRLYQ*
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mRNA from alignment at S-dermatodea_contig11255:5134..7524+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11255.806.1 ID=mRNA_S-dermatodea_contig11255.806.1|Name=mRNA_S-dermatodea_contig11255.806.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2391bp|location=Sequence derived from alignment at S-dermatodea_contig11255:5134..7524+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGATCATTGCGTTTCCACTCGACCTGCAGAGGTGCTCGGACGCGATTCG AATAGCTCAGGAGTATGAGGGCTGCGGTATGATCATCCGACAGGTGAGCT CGGCACAAAAAAGTTAGAGAACTCGACATGGCTCGTGCCCCGCCTGCCTG CTGGCTTTGCTTGTATGATGGAGTCACGGGACCAAAGGACCCACCGAGCA TGCTGTACGAGGTAGAACTACCCAAGGAATGCACGGCGTGGGATCGGTGA TCGGTGGAAGTGCAAACGCCTTTACAACGTGATTCCGCAGCAGTGAAGAG CCCGCGCGTTCGCGTTCATTCCGAACGGCGCCCTTTAGGGTACTTGTACT GCTTTTTACACTTCGATGTATCTTGTATTCAAATAGCGCCAAGCGACAAT TGGGCTGGCGCGCGTCTGAGTGAAGTGCATGCGATAAGTCAGTGCGTCAC CCCAGAGTTCAGCAACGCCGCCCGAAGCTGCGCCTCATGTGACACTCAGT AACCGAATCCCCGGACTGAAAGCTCAATCAAGTCCATCCGCTACAGTGGC GTGGAACTTTTGAACGGTTCCATATTTCGGGGCTGATAGTGCGTGTGTGT ATTTGTCTGTCTTGTGTCCATCTTCGTGCATGTTCCAGTCGATGAGCGCA CCGGGGGACGAGGAGTTGCAGCGCGCTACCAGCAGGGCTCTCCTACCGAA CGTAGAGGGGATTCGGACTTTCTTCGAAGTTTCGCGAGATATGGAGCAGG TACGGATACTGGTATTGCTGTGCCGCTCATGCGCCACACGCTTTTCGTCC CAAGACGCACCATGACGCTCAGCCGGCTGATCTTTTTGTCGCCTAAGGCA CAGAGATCGCACTCAGGAGAGCAACGCAGAACTACAGCAAACGTGCGGAA CCCCCCACCCCCACCCCCCGTTCCTCAGCGGCTGTGGTGTTTCTGGGAGC GTGTCACCGTGCTACGTAGAGAAAAATAGAACGCTCTGTGTGCGTGTGTG CTCGTCCTTGTGTGGTGCGAAGTAGATGTTGGGTACGTGTGGACGTACTT GAGCTCACGTGCTTTGGTGGAGACCTCGACCTTCGTCCCCGCACTTTTAC AATAATGCGGCGAGAACATCCCTGCCGAACGCGTCTGCTCCATCTCTATA TCTATAGAGCGTTCCGATTCTACTGCGGAGGCTGGTGGAGCTGGACTCAA TCGTGGAGCGGCCGCTATTGGTGTGCAAGTTGACAGAGCTGCTACAGGCA GTGCTGGAGTGGGATCAACTTAAGGTCCGCCGTTGCGACCTCTTTTGTGT TTTGTGCGGGGGTGGAATTATGTCTAGTTGTGCTCCAACATACTCTATAC ATTACTGTATCTAGTCGCCTTGGAATCGATCGCGTTGACATAGCTGGGCG CCCCGGGCCAATAGCTAGGGCATAAAGCGCTCTCCCTTCACTGGCGTAGG ATAATCGCAAGTGGAAACAGGCTGCTGTTCGTGGCATGATGCGGGATCGC TGGCTGCGTTCAAGATGCCGATGCCGCAAGCTGTTTTGTGATATTGGACG AGGCGCGTTGTATTGTACCAGTACGTACTTTGTTCGTGAGCTCTCACCTA TCAACTGATGCCCGCGGCAGCTGGACGTAGACCTCCCACACGGGGCAGTG CGGTCGGGGCGGGCAGCCGACTTTACAGTCGCGAACACGACCGCTGGTGG CAGCAAACAACGCTGACCTATCTCCATGAGTTTATATTGCTGTGTCGAGC ATGTAAAACTTAGCTACCATCGATCACCAGGGGTGGGTATTGTTGCGAGT CATTCTTCACTTGAGCTGTGCATGGGCGTCGAAGCTGATGCAACTTTCCT TGCATCCCCACGTTTGCCGACAGATGATGCGCCCGCAGATCCAGAACGAC TTCGCCTCCTACCGCAGGCATCTTCCTCGAATGAAAAGGGAACATGAGGA GGGGCTGTTGCCGCAGTTACCCGTCGTGGATACCGATGCGAACGCTATAT CTATGTTCATCGCTGAGGTGTGTGCGACTGATTTTCCTTCAAGTGATGCA GGGAGTCATCTGCAGAGTCCGGGCGATCTAGAGCTGCTTCTCTTCCCCCC GCCCGCTGTCGAGATTACCGGGATCAAAAGCGCACCCAGGGTATTTCGTT GTAGACATCGTTCGTTTTACTGCGTTATGGCCGTCTTAGTCTCCTCAATC CTTATCTCCTCCATCCTGAACGCGAACCTTGCCCGCCACCCGACTTGCCG TGCGAGCAGAACGTGCCGTTCATGGTGACGCTCGCGAGGGCGACGGCGGA GACGGCGAGGGAGGTGCCGCGCGTAGTTAACGTCATCGCCACGGTGGCAA ACATGTGCTGCGGGATGGTGCAGCGAAGGCTCTACCAGTAA
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Coding sequence (CDS) from alignment at S-dermatodea_contig11255:5134..7524+

>mRNA_S-dermatodea_contig11255.806.1 ID=mRNA_S-dermatodea_contig11255.806.1|Name=mRNA_S-dermatodea_contig11255.806.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1194bp|location=Sequence derived from alignment at S-dermatodea_contig11255:5134..7524+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGATCATTGCGTTTCCACTCGACCTGCAGAGGTGCTCGGACGCGATTCG
AATAGCTCAGGAGTATGAGGGCTGCGGTATGATCATCCGACAGATGATCA
TTGCGTTTCCACTCGACCTGCAGAGGTGCTCGGACGCGATTCGAATAGCT
CAGGAGTATGAGGGCTGCGGTATGATCATCCGACAGTCGATGAGCGCACC
GGGGGACGAGGAGTTGCAGCGCGCTACCAGCAGGGCTCTCCTACCGAACG
TAGAGGGGATTCGGACTTTCTTCGAAGTTTCGCGAGATATGGAGCAGTCG
ATGAGCGCACCGGGGGACGAGGAGTTGCAGCGCGCTACCAGCAGGGCTCT
CCTACCGAACGTAGAGGGGATTCGGACTTTCTTCGAAGTTTCGCGAGATA
TGGAGCAGAGCGTTCCGATTCTACTGCGGAGGCTGGTGGAGCTGGACTCA
ATCGTGGAGCGGCCGCTATTGGTGTGCAAGTTGACAGAGCTGCTACAGGC
AGTGCTGGAGTGGGATCAACTTAAGAGCGTTCCGATTCTACTGCGGAGGC
TGGTGGAGCTGGACTCAATCGTGGAGCGGCCGCTATTGGTGTGCAAGTTG
ACAGAGCTGCTACAGGCAGTGCTGGAGTGGGATCAACTTAAGATGATGCG
CCCGCAGATCCAGAACGACTTCGCCTCCTACCGCAGGCATCTTCCTCGAA
TGAAAAGGGAACATGAGGAGGGGCTGTTGCCGCAGTTACCCGTCGTGGAT
ACCGATGCGAACGCTATATCTATGTTCATCGCTGAGATGATGCGCCCGCA
GATCCAGAACGACTTCGCCTCCTACCGCAGGCATCTTCCTCGAATGAAAA
GGGAACATGAGGAGGGGCTGTTGCCGCAGTTACCCGTCGTGGATACCGAT
GCGAACGCTATATCTATGTTCATCGCTGAGAACGTGCCGTTCATGGTGAC
GCTCGCGAGGGCGACGGCGGAGACGGCGAGGGAGGTGCCGCGCGTAGTTA
ACGTCATCGCCACGGTGGCAAACATGTGCTGCGGGATGGTGCAGCGAAGG
CTCTACCAGTAAAACGTGCCGTTCATGGTGACGCTCGCGAGGGCGACGGC
GGAGACGGCGAGGGAGGTGCCGCGCGTAGTTAACGTCATCGCCACGGTGG
CAAACATGTGCTGCGGGATGGTGCAGCGAAGGCTCTACCAGTAA
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