mRNA_S-dermatodea_contig11247.800.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11247.800.1
Unique NamemRNA_S-dermatodea_contig11247.800.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig11247.800.1 vs. uniprot
Match: A0A6H5L0H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H5_9PHAE)

HSP 1 Score: 449 bits (1154), Expect = 2.950e-155
Identity = 217/314 (69.11%), Postives = 253/314 (80.57%), Query Frame = 1 
Query:   85 VRSLSSLLDTSDEAPVVAAPLGRSWRAWARRQGDGAIAVYVLTSLLAIGLVLGFVVPPSVELHGPYRRISAVIGWTYFCSWSVSFYPQVLLNFRRKTSVGLSFDFLVYNVLAFSCYAAFTASLYWSNTVKRAYDKRHGGQGSKVQLNDAVFALHALFITLVTLAQVIYYDWRTGRQRPSFAAVVTCSLIVTCASVYAVAVASARLAWGAGGEDSSESEVALLNWLDFLYFLSYVKIAVTILKYVPQAVLNTKRRSTKGWAIWNVILDFTGGLLSVVQLVLDCWNTGDWGGIRGYPVKFAIGFVSVFFDIVFMFQ 1026
            VRSLS LLDTS+E     AP  RS RAW R +GD A+A+ +L  ++ +G+ LG V+P S ELHGPYRRISA+IGWTYFCSWSVSFYPQVLLN+RRKTSVGLSFDFL+YNVLAFSCY+AFT SL+WS  ++RAYDKRH GQ +KVQLNDAVFALHA F++  TLAQV+YYDWR  +QRPS AAV  C +I+  +S YAV+V + +   G G      S+  LLNWLDFLYFLSYVK+   I+KYVPQ +LN +R ST GW IWNVILD TGGLLSVVQLVLDCWNTGDWGGI GYPVKFAIGFVSVFFD++F+FQ
Sbjct:    6 VRSLSCLLDTSEEISAGGAPACRSLRAWVRGRGDPALALLILGFIVVVGVALGSVLPASDELHGPYRRISAIIGWTYFCSWSVSFYPQVLLNYRRKTSVGLSFDFLLYNVLAFSCYSAFTCSLHWSKFMQRAYDKRHAGQPNKVQLNDAVFALHATFVSFFTLAQVVYYDWRDRKQRPSSAAVAVCGVILASSSAYAVSVWAGQTTRGNG------SDRGLLNWLDFLYFLSYVKVVTGIIKYVPQVILNIRRHSTAGWTIWNVILDLTGGLLSVVQLVLDCWNTGDWGGIAGYPVKFAIGFVSVFFDLIFLFQ 313
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BLAST of mRNA_S-dermatodea_contig11247.800.1 vs. uniprot
Match: D7FJH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJH4_ECTSI)

HSP 1 Score: 360 bits (925), Expect = 2.200e-121
Identity = 172/236 (72.88%), Postives = 196/236 (83.05%), Query Frame = 1 
Query:  319 CSWSVSFYPQVLLNFRRKTSVGLSFDFLVYNVLAFSCYAAFTASLYWSNTVKRAYDKRHGGQGSKVQLNDAVFALHALFITLVTLAQVIYYDWRTGRQRPSFAAVVTCSLIVTCASVYAVAVASARLAWGAGGEDSSESEVALLNWLDFLYFLSYVKIAVTILKYVPQAVLNTKRRSTKGWAIWNVILDFTGGLLSVVQLVLDCWNTGDWGGIRGYPVKFAIGFVSVFFDIVFMFQ 1026
            CSWSVSFYPQVLLN+RRKTSVGLSFDFL+YNVLAFSCY+AFT SLYWS +V+RAYDKRH GQ +KVQLNDAVFALHA F++  TLAQV+YYDWR  +QRPS AAV  C +I+  +S YA++V + R   G G      S+  LLNWLDFLYFLSYVK+   I+KYVPQ +LN +R ST GW IWNVILD TGGLLSVVQLVLDCWNTGDWGGI GYPVKFAIGFVSVFFD++F+FQ
Sbjct:   24 CSWSVSFYPQVLLNYRRKTSVGLSFDFLLYNVLAFSCYSAFTCSLYWSKSVQRAYDKRHAGQPNKVQLNDAVFALHATFVSFFTLAQVVYYDWRDRKQRPSSAAVAVCGVILASSSAYALSVWAGRTTRGNG------SDRGLLNWLDFLYFLSYVKVVTGIIKYVPQVILNIRRHSTAGWTIWNVILDLTGGLLSVVQLVLDCWNTGDWGGIAGYPVKFAIGFVSVFFDLIFLFQ 253
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BLAST of mRNA_S-dermatodea_contig11247.800.1 vs. uniprot
Match: A0A836C9F4_9STRA (Putative lysosomal cystine transporter family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9F4_9STRA)

HSP 1 Score: 307 bits (786), Expect = 1.970e-100
Identity = 149/276 (53.99%), Postives = 205/276 (74.28%), Query Frame = 1 
Query:  199 VYVLTSLLAIGLVLGFVVPPSVELHGPYRRISAVIGWTYFCSWSVSFYPQVLLNFRRKTSVGLSFDFLVYNVLAFSCYAAFTASLYWSNTVKRAYDKRHGGQGSKVQLNDAVFALHALFITLVTLAQVIYYDWRTGRQRPSFAAVVTCSLIVTCASVYAVAVASARLAWGAGGEDSSESEVALLNWLDFLYFLSYVKIAVTILKYVPQAVLNTKRRSTKGWAIWNVILDFTGGLLSVVQLVLDCWNTGDWGGIRGYPVKFAIGFVSVFFDIVFMFQ 1026
            V V  +L++ G+VL FV+PP+ +LHGPYRRISA+IGW YF +WSVSFYPQV+LN+RRKT++GLSFDF +YN+L F+CY+ +T++ YWS  V+R Y+  H G  +K++ ND  FA+HA+ IT VT+AQVIYYD  +G  RPS  A+   +++ T A +   AV +A L+ GA             +W D+L  +S+VK+AVT++KY+PQA LN +RRST+GW+I+NV+LDFTGGLLS++QL+LDC NT DW GI G PVKF +G  S+ FD+VF+ Q
Sbjct:   10 VLVGGALISAGVVLAFVLPPNEKLHGPYRRISAIIGWIYFLAWSVSFYPQVVLNYRRKTTIGLSFDFQLYNLLGFTCYSIYTSAFYWSTAVQREYEHSHNGNSNKIEPNDVAFAIHAVAITCVTIAQVIYYDHVSG-HRPSRVAI--SAVLATTAFLAVHAVVAAILSPGASHP---------FHWTDWLSAVSFVKLAVTLVKYIPQAALNARRRSTQGWSIYNVLLDFTGGLLSLLQLLLDCGNTRDWSGIVGTPVKFGLGLTSMVFDVVFLTQ 273
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BLAST of mRNA_S-dermatodea_contig11247.800.1 vs. uniprot
Match: A0A7S4DB46_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB46_HETAK)

HSP 1 Score: 262 bits (670), Expect = 2.760e-82
Identity = 134/266 (50.38%), Postives = 174/266 (65.41%), Query Frame = 1 
Query:  229 GLVLGFVVPPSVELHGPYRRISAVIGWTYFCSWSVSFYPQVLLNFRRKTSVGLSFDFLVYNVLAFSCYAAFTASLYWSNTVKRAYDKRHGGQGSKVQLNDAVFALHALFITLVTLAQVIYYDWRTGRQRPSFAAVVTCSLIVTCASVYAVAVASARLAWGAGGEDSSESEVALLNWLDFLYFLSYVKIAVTILKYVPQAVLNTKRRSTKGWAIWNVILDFTGGLLSVVQLVLDCWNTGDWGGIRGYPVKFAIGFVSVFFDIVFMFQ 1026
            G+VLG V+PPS  L   Y+ IS +IG+TYF +WS+SFYPQV LN+ RK++ GLSFDF  YN L F  Y+ F    Y+   ++  Y K H G  +KV LND  FA+HAL IT++T+ Q+ YYD    + R S+   +   +   C + YA  V   R                 L WL +LYFLSYVK+A+T++KY+PQA LN +RRST GW+I NV+LD  GGLLSV+QL+LDC  TGDWGGI G PVKF +GFVS+FFD++FM Q
Sbjct:   67 GVVLGLVLPPSSNLPKKYKYISNIIGYTYFVAWSISFYPQVWLNWCRKSTRGLSFDFEAYNFLGFLTYSVFNLCFYFVPAIQDEYRKTHDGNDNKVALNDVCFAVHALIITVITIMQMRYYD--RYQTRASWVGCLLLGIGFLCIAGYAGGVLLLR---------------RRLTWLGWLYFLSYVKMAITVVKYIPQAYLNYRRRSTAGWSIGNVLLDALGGLLSVLQLILDCHATGDWGGITGDPVKFGLGFVSIFFDVIFMLQ 315
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BLAST of mRNA_S-dermatodea_contig11247.800.1 vs. uniprot
Match: A0A024UGL0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UGL0_9STRA)

HSP 1 Score: 256 bits (653), Expect = 3.950e-80
Identity = 133/273 (48.72%), Postives = 177/273 (64.84%), Query Frame = 1 
Query:  208 LTSLLAIGLVLGFVVPPSVELHGPYRRISAVIGWTYFCSWSVSFYPQVLLNFRRKTSVGLSFDFLVYNVLAFSCYAAFTASLYWSNTVKRAYDKRHGGQGSKVQLNDAVFALHALFITLVTLAQVIYYDWRTGRQRPSFAAVVTCSLIVTCASVYAVAVASARLAWGAGGEDSSESEVALLNWLDFLYFLSYVKIAVTILKYVPQAVLNTKRRSTKGWAIWNVILDFTGGLLSVVQLVLDCWNTGDWGGIRGYPVKFAIGFVSVFFDIVFMFQ 1026
            L+ + A G+ LGF    +  +  PY RIS+VIGW YF  WSVSF+PQV LN+RR++ VGLS DFLVYN+L F CYA F A+ YWS+ ++  Y K H G  + VQ+ND  FALHA+F+TL+T  Q   Y    G Q  S       SL   C SV  ++V  + + +  G   S+E      + L+FLY LSYVK+ V+++KY+PQ +LN +R+ST GW IWNV+LDFTGG LS+ Q++L    T DW  I G PVKF +GF SVFFD++F+ Q
Sbjct:   36 LSVIAATGIGLGFATDSTDNIPQPYNRISSVIGWVYFACWSVSFWPQVFLNWRRQSVVGLSLDFLVYNILGFVCYAVFNAAFYWSDAIQDEYKKHHDGHPNAVQVNDVFFALHAVFVTLLTYYQTTIYT--RGTQTTS-------SL---CKSVVGMSVIVSGVFFLLGFIVSNE----WFSTLNFLYLLSYVKLGVSLVKYIPQVILNYQRKSTVGWTIWNVLLDFTGGTLSMAQIMLTSSVTNDWSAITGDPVKFGLGFTSVFFDVIFITQ 292
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BLAST of mRNA_S-dermatodea_contig11247.800.1 vs. uniprot
Match: W4GGB7_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGB7_9STRA)

HSP 1 Score: 254 bits (650), Expect = 7.440e-80
Identity = 132/266 (49.62%), Postives = 175/266 (65.79%), Query Frame = 1 
Query:  229 GLVLGFVVPPSVELHGPYRRISAVIGWTYFCSWSVSFYPQVLLNFRRKTSVGLSFDFLVYNVLAFSCYAAFTASLYWSNTVKRAYDKRHGGQGSKVQLNDAVFALHALFITLVTLAQVIYYDWRTGRQRPSFAAVVTCSLIVTCASVYAVAVASARLAWGAGGEDSSESEVALLNWLDFLYFLSYVKIAVTILKYVPQAVLNTKRRSTKGWAIWNVILDFTGGLLSVVQLVLDCWNTGDWGGIRGYPVKFAIGFVSVFFDIVFMFQ 1026
            G+ LGF    +  +  PY RIS+VIGW YF  WSVSF+PQV LN+RR++ VGLS DFLVYN+L F CYA F A+ +WS+ V+  Y K H G  + VQ+ND  FALHA+F+TL+T  Q   Y    G Q       VT  L   C SV  V+V ++ L +  G   S+E      + L+FLY LSYVK+ V+++KY+PQ +LN +R+ST GW IWNV+LDF+GG+LS+ Q++L    T DW  I G PVKF +GF SVFFD++F+ Q
Sbjct:   30 GVGLGFATDSTDNIPQPYNRISSVIGWVYFACWSVSFWPQVFLNWRRQSVVGLSLDFLVYNILGFVCYAVFNAAFFWSDAVQDEYKKHHDGNPNAVQVNDVFFALHAVFVTLLTYYQSTIYT--RGAQ-------VTSGL---CKSVVGVSVVASGLFFLLGFVVSNE----WFSTLNFLYLLSYVKLGVSLVKYIPQVILNYQRKSTVGWTIWNVLLDFSGGILSMAQIILTSSVTNDWTAITGDPVKFGLGFTSVFFDVIFITQ 279
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BLAST of mRNA_S-dermatodea_contig11247.800.1 vs. uniprot
Match: A0A1E7EIT9_9STRA (PQ-loop-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EIT9_9STRA)

HSP 1 Score: 254 bits (650), Expect = 2.740e-79
Identity = 126/279 (45.16%), Postives = 182/279 (65.23%), Query Frame = 1 
Query:  208 LTSLLAIGLVLGFVVPPSVELHGPYRRISAVIGWTYFCSWSVSFYPQVLLNFRRKTSVGLSFDFLVYNVLAFSCYAAFTASLYWSNTVKRAYDKRHGGQGS-KVQLNDAVFALHALFITLVTLAQVIYYD-----WRTGRQRPSFAAVVTCSLIVTCASVYAVAVASARLAWGAGGEDSSESEVALLNWLDFLYFLSYVKIAVTILKYVPQAVLNTKRRSTKGWAIWNVILDFTGGLLSVVQLVLDCWNTGDWGGIRGYPVKFAIGFVSVFFDIVFMFQ 1026
            L+++  +G  +G + P +  L  PY+ ISA IG+ YF SWS+SFYPQV+ NF+R+++VGLS DF V NVL FSCY A+ AS +WS T+K  Y +R+G      VQ ND  FA+HAL ++ +TL Q+ YY      W     +P+   +V  S++  CA +Y + V + R   G    D  +  +   NWLD+LY LS+VKI ++++KY+PQ +LN KR+ST GW+IWN++LDFTGG+LS +QL LDC N  D+  I     KF +G++S+ FDI+F+ Q
Sbjct:   28 LSTIFVVGTGIGLLTPKNPALTPPYQCISAAIGYIYFLSWSISFYPQVMSNFQRRSTVGLSADFCVLNVLGFSCYTAYNASFFWSATIKEYYKQRYGPDAEITVQSNDVAFAIHALILSSITLCQIAYYGDEPGIWSIKLSKPTIFIIV--SILGVCA-MYPLLVITHR---GRDNVDYEDDAIGRFNWLDYLYILSFVKIFISLIKYIPQVILNFKRKSTVGWSIWNILLDFTGGMLSDLQLFLDCINLHDFRSITRNLAKFGLGWLSIIFDIIFLVQ 300
[Close]
BLAST of mRNA_S-dermatodea_contig11247.800.1 vs. uniprot
Match: A0A087SL29_AUXPR (Cystinosin n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SL29_AUXPR)

HSP 1 Score: 252 bits (643), Expect = 7.210e-79
Identity = 129/271 (47.60%), Postives = 171/271 (63.10%), Query Frame = 1 
Query:  226 IGLVLGFVVPPSVELHGPYRRISAVIGWTYFCSWSVSFYPQVLLNFRRKTSVGLSFDFLVYNVLAFSCYAAFTASLYWSNTVKRAYDKRHGGQGSKVQLNDAVFALHALFITLVTLAQVIYY-DWRTGRQRPSFAAVVTCSLIVTCASVYAVAVASARLAWGAGGEDSSES---EVALLNWLDFLYFLSYVKIAVTILKYVPQAVLNTKRRSTKGWAIWNVILDFTGGLLSVVQLVLDCWNTGDWGGIRGYPVKFAIGFVSVFFDIVFMFQ 1026
            +GL++G  +P + EL  P   +S +IGWTYF +WSVSFYPQV LN+ RK+  GLS DF + N+L F CYA +  SLYW+  ++ AY   HGG    V  ND  FALHA  +T+VTLAQ + Y   RT   R   AAVV  S         AV   +A L W  G   S  +   E     WL+ LY +S VK+AV+++KY+PQ +LN + RST+GW +WNV+LDF GG LS+ Q+++D    GDW  I G PVKFA+GFVS+FFD++F+ Q
Sbjct:    1 MGLIVGLSLPSNPELPAPLNIVSPIIGWTYFAAWSVSFYPQVWLNYTRKSVSGLSLDFQILNLLGFICYAVYNVSLYWNAAIREAYRLVHGGNSPAVHANDVFFALHAAVLTMVTLAQSLAYPSSRTPPSRLCVAAVVATS--------GAVLAYAAALYWAPGLHPSCLNGCTEGTWFTWLNLLYLVSLVKLAVSLVKYIPQVILNHRLRSTRGWNVWNVLLDFEGGALSLAQMIIDNSVCGDWSAITGNPVKFALGFVSMFFDVIFVGQ 263
[Close]
BLAST of mRNA_S-dermatodea_contig11247.800.1 vs. uniprot
Match: A0A485LCK2_9STRA (Aste57867_19346 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCK2_9STRA)

HSP 1 Score: 251 bits (640), Expect = 2.800e-78
Identity = 128/273 (46.89%), Postives = 173/273 (63.37%), Query Frame = 1 
Query:  208 LTSLLAIGLVLGFVVPPSVELHGPYRRISAVIGWTYFCSWSVSFYPQVLLNFRRKTSVGLSFDFLVYNVLAFSCYAAFTASLYWSNTVKRAYDKRHGGQGSKVQLNDAVFALHALFITLVTLAQVIYYDWRTGRQRPSFAAVVTCSLIVTCASVYAVAVASARLAWGAGGEDSSESEVALLNWLDFLYFLSYVKIAVTILKYVPQAVLNTKRRSTKGWAIWNVILDFTGGLLSVVQLVLDCWNTGDWGGIRGYPVKFAIGFVSVFFDIVFMFQ 1026
            L  +   GL LGF    +  +  PY RIS+++GW YF  WSVSF+PQV LN+RR++ VGLS DFLVYN+L F CYA F  + +WS+ V+  Y K H G  + VQ+ND  FALHA+ +T +T  Q   Y  R G            S+ VTC SV   ++  + L +  G   S+E      + L+FLY LSYVK+ ++++KY+PQ  LN +R+ST GW IWNV+LDFTGG+LS+ Q+++    T DW  I G PVKF +GFVSVFFDI+F+ Q
Sbjct:   28 LAVITVTGLGLGFATDATDNIPAPYNRISSIVGWIYFACWSVSFWPQVFLNWRRQSVVGLSLDFLVYNILGFVCYAIFNCAFFWSDAVQAEYMKLHDGHRNAVQVNDVFFALHAVLVTSLTYYQTTIYS-RGGN-----------SISVTCKSVVGGSLVVSGLFFLLGYVVSNE----WFSTLNFLYLLSYVKLGISLVKYIPQVYLNFQRKSTVGWTIWNVLLDFTGGMLSMAQIIMTSAVTDDWSAITGDPVKFGLGFVSVFFDIIFISQ 284
[Close]
BLAST of mRNA_S-dermatodea_contig11247.800.1 vs. uniprot
Match: A0A6G0WBP7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WBP7_9STRA)

HSP 1 Score: 250 bits (639), Expect = 3.600e-78
Identity = 129/283 (45.58%), Postives = 181/283 (63.96%), Query Frame = 1 
Query:  202 YVLTSLLAIGLV--------LGFVVPPSVELHGPYRRISAVIGWTYFCSWSVSFYPQVLLNFRRKTSVGLSFDFLVYNVLAFSCYAAFTASLYWSNTVKRAYDKRHGGQGSKVQLNDAVFALHALFITLVTLAQVIYYDWRTGRQRPSFAAVVTCSLIVTCASVYAVAVASARLAWGAGGEDSSESEVALLNWLDFLYFLSYVKIAVTILKYVPQAVLNTKRRSTKGWAIWNVILDFTGGLLSVVQLVLDCWNTGDWGGIRGYPVKFAIGFVSVFFDIVFMFQ 1026
            ++ T+ LA+GL         LGF    +  +  PY RIS+++GW YF  WSVSF+PQV LN+RR++ VGLS DFLVYN+L F CYA F  + +W++TV+R Y K H G  + VQ+ND  FALHA+F+T+ T  Q   Y    G Q  S           TC ++   ++  + + +  G   +SE    +L+ L+FLY LSYVK+ V+++KY+PQ +LN +R+ST GW IWNV+LDFTGG+LS+ Q+++    T DW  I G PVKF +GF SVFFDI+F+ Q
Sbjct:   14 WIETNGLAVGLGVIAVTGFGLGFGTDSTDNIPAPYNRISSIVGWIYFACWSVSFWPQVFLNWRRQSVVGLSLDFLVYNILGFLCYAIFNCAFFWNDTVQREYAKFHDGHRNAVQVNDVFFALHAVFVTIFTYYQTTIYT--RGGQVVS----------TTCKTIVGGSLIVSAVFFLLGYIVNSE----VLSALNFLYLLSYVKLGVSLVKYIPQVILNYERKSTAGWTIWNVLLDFTGGMLSMAQIIMTSAVTNDWSAITGDPVKFGLGFTSVFFDIIFIVQ 280
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11247.800.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0H5_9PHAE2.950e-15569.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJH4_ECTSI2.200e-12172.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C9F4_9STRA1.970e-10053.99Putative lysosomal cystine transporter family n=1 ... [more]
A0A7S4DB46_HETAK2.760e-8250.38Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A024UGL0_9STRA3.950e-8048.72Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
W4GGB7_9STRA7.440e-8049.62Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A1E7EIT9_9STRA2.740e-7945.16PQ-loop-domain-containing protein n=1 Tax=Fragilar... [more]
A0A087SL29_AUXPR7.210e-7947.60Cystinosin n=3 Tax=Auxenochlorella protothecoides ... [more]
A0A485LCK2_9STRA2.800e-7846.89Aste57867_19346 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0WBP7_9STRA3.600e-7845.58Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11247contigS-dermatodea_contig11247:1137..6500 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score360.5
Seed ortholog evalue8.5e-97
Seed eggNOG ortholog2880.D7FJH4
KEGG koko:K12386
KEGG Pathwayko04142,map04142
GOsGO:0000099,GO:0000101,GO:0000322,GO:0000323,GO:0000324,GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005773,GO:0005774,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0012505,GO:0015075,GO:0015171,GO:0015179,GO:0015184,GO:0015318,GO:0015711,GO:0015804,GO:0015807,GO:0015811,GO:0015849,GO:0016020,GO:0016021,GO:0022857,GO:0031090,GO:0031224,GO:0031410,GO:0031982,GO:0034220,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072337,GO:0072348,GO:0072349,GO:0097708,GO:0098588,GO:0098656,GO:0098805,GO:1901682,GO:1902475,GO:1903825,GO:1905039
EggNOG free text desc.L-cystine transmembrane transporter activity
EggNOG OGsKOG3145@1,KOG3145@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04147
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionLysosomal cystine transporter
Ec32 orthologEc-04_006130.1
Exons6
Model size1026
Cds size1026
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11247.800.1prot_S-dermatodea_contig11247.800.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11247 1137..6500 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924193.5119367-CDS-S-dermatodea_contig11247:1136..12471622924193.5119367-CDS-S-dermatodea_contig11247:1136..1247Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11247 1137..1247 -
1694079082.7438054-CDS-S-dermatodea_contig11247:1136..12471694079082.7438054-CDS-S-dermatodea_contig11247:1136..1247Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11247 1137..1247 -
1622924193.5217214-CDS-S-dermatodea_contig11247:1571..16971622924193.5217214-CDS-S-dermatodea_contig11247:1571..1697Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11247 1572..1697 -
1694079082.754671-CDS-S-dermatodea_contig11247:1571..16971694079082.754671-CDS-S-dermatodea_contig11247:1571..1697Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11247 1572..1697 -
1622924193.5335574-CDS-S-dermatodea_contig11247:3715..39251622924193.5335574-CDS-S-dermatodea_contig11247:3715..3925Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11247 3716..3925 -
1694079082.762325-CDS-S-dermatodea_contig11247:3715..39251694079082.762325-CDS-S-dermatodea_contig11247:3715..3925Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11247 3716..3925 -
1622924193.541974-CDS-S-dermatodea_contig11247:4285..44191622924193.541974-CDS-S-dermatodea_contig11247:4285..4419Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11247 4286..4419 -
1694079082.7716167-CDS-S-dermatodea_contig11247:4285..44191694079082.7716167-CDS-S-dermatodea_contig11247:4285..4419Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11247 4286..4419 -
1622924193.5532525-CDS-S-dermatodea_contig11247:4592..47141622924193.5532525-CDS-S-dermatodea_contig11247:4592..4714Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11247 4593..4714 -
1694079082.7801812-CDS-S-dermatodea_contig11247:4592..47141694079082.7801812-CDS-S-dermatodea_contig11247:4592..4714Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11247 4593..4714 -
1622924193.5686457-CDS-S-dermatodea_contig11247:6177..65001622924193.5686457-CDS-S-dermatodea_contig11247:6177..6500Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11247 6178..6500 -
1694079082.79437-CDS-S-dermatodea_contig11247:6177..65001694079082.79437-CDS-S-dermatodea_contig11247:6177..6500Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11247 6178..6500 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11247.800.1

>prot_S-dermatodea_contig11247.800.1 ID=prot_S-dermatodea_contig11247.800.1|Name=mRNA_S-dermatodea_contig11247.800.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=342bp
GSQSRQTPGSRQPQPALLSQANIMTGPRVRSLSSLLDTSDEAPVVAAPLG
RSWRAWARRQGDGAIAVYVLTSLLAIGLVLGFVVPPSVELHGPYRRISAV
IGWTYFCSWSVSFYPQVLLNFRRKTSVGLSFDFLVYNVLAFSCYAAFTAS
LYWSNTVKRAYDKRHGGQGSKVQLNDAVFALHALFITLVTLAQVIYYDWR
TGRQRPSFAAVVTCSLIVTCASVYAVAVASARLAWGAGGEDSSESEVALL
NWLDFLYFLSYVKIAVTILKYVPQAVLNTKRRSTKGWAIWNVILDFTGGL
LSVVQLVLDCWNTGDWGGIRGYPVKFAIGFVSVFFDIVFMFQ
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mRNA from alignment at S-dermatodea_contig11247:1137..6500-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11247.800.1 ID=mRNA_S-dermatodea_contig11247.800.1|Name=mRNA_S-dermatodea_contig11247.800.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5364bp|location=Sequence derived from alignment at S-dermatodea_contig11247:1137..6500- (Saccorhiza dermatodea SderLu1190fm monoicous)
GGGTCCCAGTCCAGGCAAACTCCAGGCTCCAGACAGCCACAGCCAGCACT
GCTGTCGCAGGCAAACATAATGACTGGACCGCGAGTGAGGTCACTTTCCT
CCCTCTTAGACACCTCGGATGAAGCTCCAGTTGTCGCAGCGCCTTTAGGC
CGGTCTTGGCGTGCTTGGGCTCGCCGGCAAGGGGACGGGGCAATCGCCGT
GTACGTACTCACGTCGCTGTTGGCCATCGGGCTAGTTCTGGGCTTCGTGG
TGCCCCCATCTGTCGAACTCCATGGCCCCTACCGGAGGATCTCGGCTGTG
ATCGGGTGGACGTACTTCTGCAGGCGGGTCGTCGGGTCGTTTTGAAGTCA
ACATTAGGAATGGTTTGGGTGCAAGTATCAGATGTTTTCAAGTACCTGTC
CTGGGGCAGAATAGGAACACTCGCCCGCCCGCGTTGGGATTGCGTGTGCT
TTCGTCGAGCTATATGCTCTGTCCGATATTGCAGAGAGCACCATGGTGCG
GTGATACAGCGCTGATCGTGTGAGGACGAGGTTTACGCGACCCACCTTGC
TAATTTCCATCTTAGCCGTGCGACTAAAATAGAACTCGCGTGAAAGACAA
AAAAGGAAGGTCTACAAGTAGATGATACACTCTGTTGTTGCTTTATTTAG
AAGTAAGGTCATAAGCCGGAACAGTCTGATTTGGCGGGGGGCCTCCGAAC
GTCAACAGCCCACACGTCTGTTCTGCACCAGTATGGTACATGCCATATCA
AGAACCGGACGGCGCCTTGCGATGTTTGCGACTATCTTATTGCGTAGGAT
GCCACCACCACATCGCAACCAATGTCAACGCCGCATCATATACATATGGC
GCCAGTTTGACGCAGGCGAAGCTCCTTCTCATACGCATATATCATATATA
TAGATAGGTCGTCGAAGCTGAGAATACCGCGGAAGTAGGGCTCGCCTGGG
TTCGACGTTTTGGTAACGTCCCGACTCTGCACGCACCGAGCGCTTGTATC
GGGCTGCACTCGGAAATCATCGACGTACACTCAGCCACCCCGAGTGCCCC
TAGGACAGACAGCCTCGGCATCTTGGCTGTGTGTAAGCTTTGACTGGGTT
CTGCTCTATTAATAGTATGTGTTTACACACGAAGTACTTGCACTGGTTGG
GACGCTCTATAATGGTACACGATTGGAGACCGCACTCTAGAGCTCTAGAA
CGCGGGGGCGCCATGGTGCAGAAACACCTGCAATAGAGCCATGTGGATTG
GTCTGGACTGGTTGCGCAACGTTTAAGGCAGGCACCGTCAACCGGCCGGC
AGCATGGGCCGCACAACACTCTCCTGTTTTTTAGAGCTGGACGTTTCCGA
GTTGGCTCGTCCGTTCCGTCGGCAAACGCGTGCATGTTAATGGCGGGTGG
TTTCCGGTGCAGCCGATGCCGCCGCAAGTGCAAAACGCCACGCATTTGCG
TCGGGGTAAACTTGCAGCGCTGCTGTTGAGGCAACATCAAGCTCGGCTGA
GTATTTCACAACACTGTGTTGCAAATTATCAATTATCACCTCCGAGATCC
CTTCGATGTGGCCCCGCTGCTCAAATCCCCCACCCCCCTGCCGGGCGCTT
TGCTCGCATGCGCAGACACCAGATTACGCCTTGTCAAGCTTCTTTTTGTA
ACCCCTTGTTCGCTTCTGTTTGCGTCCTTGTCGACGGCCGGCTTGTACCG
CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGGTCGCGAC
CGTTCGGTGTTGTGGTGCGTGTGCCGTGCGGTGCAGCTGGAGCGTGTCGT
TCTACCCCCAGGTGCTGCTGAACTTTCGGAGGAAGACGAGCGTCGGGCTG
TCGTTTGACTTCCTCGTGTACAACGTGCTCGCGTTTTCTTGCTACGCCGC
CTTCACCGGTGAGCCTAGTTTTGCGAGGCACCCGGTATCACGTCGAGTCG
CCGAAGCCGCCTGTTTCTGACTGTGCTGCCATCCGCGTCCGTTTTCATAG
GCTGCATGATGCACGCATGGGAGCGCTTATTTACCAACAGTAAATCTTCC
GCGCCGTTCGTTTGAATCGATGCGTCCTCAGCCTCGCTGTACTGGTCGAA
CACGGTGAAGCGGGCGTACGACAAGCGGCACGGGGGACAGGGCAGCAAAG
TGCAGCTGAACGACGCCGTCTTCGCCCTGCACGCGCTTTTTATTACCCTC
GTCACCCTGGCGCAGGTATTAATAATACCTTTCAGACTTTAGGACAAGGC
AAGAATTGAAGTTTTCTGAGGAGTCGCAGCTCGGGCCCATTGAGGGGGGC
TCTTGTGACTTTTCCCCCCCAATATGCCCGTGTCAAGGTGTTGGGCCAAA
GCAGGTGTAGCGTTGCGCTGCGTACCCCCCCTCTCCCGCTACAGTACGCA
TTGAAACTCGAAATTTGTGTGCAGGACCGTGGGCGGTGTTTGCTTCAGTG
GTGGGACCACACCGACGCTGCTCTCCTCCTGGTACGCTCTGGTTAAGCAA
GAAAAATCATACTTGCTTACATGACTCCCCCCCCCCCCGCTTCCGCTCAC
ACACACTCCCACGTTGGCCGCCAAGGTAATTTACTACGATTGGCGAACGG
GTAGGCAACGACCATCTTTCGCTGCCGTGGTGACCTGCAGCCTCATCGTC
ACGTGCGCCTCGGTCTACGCGGTGGCGGTGGCGAGTGCGCGCTTGGCGTG
GGGTGCGGGCGGGGAAGATTCGTCGGAAAGCGAAGTCGCGCTCCTGAACT
GGCTGGACTTTCTCTACTTCCTGTCCTACGTGAAGGTAAGACCTGGGAGG
CTCGAGGAAAGGCTCTGCTGTGGGGAACCTTTTGGTCCTGCTGTTGTGTC
CGGTACGTGTATCAGTTCGGATACGGAGGGTACTTTTTCGTGGGCAGAGG
CCAAAGAAAGGCATACAGATATATACATATACAGTACATATGTATATACG
AAGTATATATATATAACCTTGCTGAACGTTGTCACTCTAAGGTACAGCTG
TCATGTCAGCATAGGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGTGTCT
GTGTTTGTGGCTCACGTTTGATATGACTGGCCGGCCTTTTCCGAACCCCA
TGTGTGGTCAAGAGGAATCATCCCCCCATCTCTGCCCGGCGCGTGCCTTA
CATTTTTGCCGTACATTGGGTTGAGCGCCCCCGCAGGTCACCGACTCTCG
GGTTTTGTTCGCTTGCGCTCTCGTGCTGTCCAAGGCAGTTTAACAGACAA
GTGTACATATTGCTATGATATGGCGTTTTTTTTTTTTAATCAAGGCCCTT
CCCTACCTTGCTTAGGCATATCCCTTAGATATGTTGAATACACACTCCGG
CGGAGACTCATGGGCGAATAGAACCTTCTTGGTGGTGACGGAGATGTGGA
AGAGGCATTTTATGAGAGGGGGGGGGGGGGAGAGGGGGTTCACTCATTGA
TTTGATTGATATTTTATAAGGGTGGATTATCACACATATCACCGACCGAC
CCGCCATTTTTCAATTGCAAAAGTGGATGCTGATCCCGCTCGTGGACGCG
TGCATGTCCTTGGGTTTGGGTAATGGGTGCAAACGGCCTGTGGTGCCCGG
GATGTAGAGAGTCTCCGAGTTTCTGCTCCGTTGCCAATCCTGCTATATTA
AAACCGTGCAATGCTTCACGATCATGAGTGATGAATGATGAGCCGTCCGT
CGTAGTTTATGTCTACTTATAGGAACAACCATTTTCGGAGAATGTTCGGA
GATCTACGTTCGAAGGCTCGCCGACGGGCCCCGAAAAAACCACGCCGAGT
GACAAGACACGAAGACGAAACTTGTCAGCAGTGGCGTCAAAAAGCAACCG
CATACGATATGGCGTCGCCTTGGTGCGGACAATTCAACGTACACCACAGC
AGTCTTCTTGTTGCAGCCCCCGCCTAAGCGCCCCCCCCCATAATAGCTGG
CACTCGAACCTTTTTTCGACCCGCAGAGCGTTGGGAGTGCACCAGAAATA
GTACGGGTAGTAACGCTGAGTGACTATATATGTTGTTAGGGATGTTTAGT
TTACCCCCACGCCTTTTACGGCATCCCGCGACGTGCTGTACCTTGGATTT
ATCAATTTCCGTATGTGTGTGTGTGTTTTTTGTTTGTTTGTTTGTTTGTG
CAATTGCCGTTGTTTCCCCCTTAATCTGGCACACGACACTGCTGTGTTTT
GTGTTGTCACACCAGCCCTACAAATCAGTCGGACGCTCCCACGTCACAAT
CTCGAAGTTTCTCCTCGCCTGTACGATAGACTGCGCTGCTGCCGCACATT
CTATTTGCCGCTGGGCAGCACTGCCGTGCGGCGGTACTTTAGCCTCGCGG
ACATCCAGCTGTAGGATAAGTGCTGTTATCTCTGCTGTATTGTCTACCTG
AGCTTCCTCAGAGATAAGAAGAGCCCTCAAGCCCTACGGTATGCGTGAAA
TATTTCAACAACAGACAACAGTAGTGTAATTAACTTCGGGAATGTTTGAT
ACACAGCAGTATCATTACACACAAACAAATAATTTCCAAAATCACCCACC
TCCCAGAGCGCGCGCCCAGCTTTCCGCGGATTGAACACGTTTCCCGGAGG
GTGTGCCCGTGTGCACCTCTCTCTCTCTCTCTCTCCTTCTATGATATGCA
TTTATTGGCCCTCGTGCTGGCGCGTGCCCAACGTTAATTGATTGATATGA
TACAGCATGTACGTTATCTCGGTTGGGTGAACACGCCGATGATTTATAAA
ATACTGCTGTGTGTGTCATGTCCTGATTGCACCTCCTCTCCGACGACGCG
CAGATAGCCGTGACGATCCTCAAGTATGTGCCGCAGGCCGTTCTCAATAC
GAAGAGGCGAAGCACGAAGGGGTGGGCCATCTGGAACGTCATCCTCGACT
TCACCGGGGGGTTGCTCAGCGTCGTGCAGGTGCGTTCGTGTTTTTTTTTT
TTGCGTCACCTGTTCATTAATCAAAGTAAGCCACCGCACACGATCTCTCC
CGGCTCTCCAGAACAAGAAATACATTCATATATAGTATCAATCCAATTGT
AGGGTTCCCCATCGTACAAGTTCACTGTCTGCATGTGGCGTATCATTGGC
ACTCTACTTTTATATGTACTGTATTTATAGTATGGTACGAGAATTTGATG
CGCCACCAGAGGCATGATCTATCAAGAGTTGTGGACAACAAGCGCTCGTG
GTCTCATCGTTACCTGTTCGTCGTCCGTCCTCCTGTGTGTGTTCTACTCT
CAGCTTGTTCTAGATTGCTGGAATACCGGCGATTGGGGGGGCATCCGAGG
TTACCCGGTCAAGTTCGCCATCGGCTTCGTGAGCGTTTTTTTCGACATCG
TCTTCATGTTTCAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig11247:1137..6500-

>mRNA_S-dermatodea_contig11247.800.1 ID=mRNA_S-dermatodea_contig11247.800.1|Name=mRNA_S-dermatodea_contig11247.800.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2052bp|location=Sequence derived from alignment at S-dermatodea_contig11247:1137..6500- (Saccorhiza dermatodea SderLu1190fm monoicous)
GGGTCCCAGTCCAGGCAAACTCCAGGCTCCAGACAGCCACAGCCAGCACT
GCTGTCGCAGGCAAACATAATGACTGGACCGCGAGTGAGGTCACTTTCCT
CCCTCTTAGACACCTCGGATGAAGCTCCAGTTGTCGCAGCGCCTTTAGGC
CGGTCTTGGCGTGCTTGGGCTCGCCGGCAAGGGGACGGGGCAATCGCCGT
GTACGTACTCACGTCGCTGTTGGCCATCGGGCTAGTTCTGGGCTTCGTGG
TGCCCCCATCTGTCGAACTCCATGGCCCCTACCGGAGGATCTCGGCTGTG
ATCGGGTGGACGTACTTCTGCAGGGGTCCCAGTCCAGGCAAACTCCAGGC
TCCAGACAGCCACAGCCAGCACTGCTGTCGCAGGCAAACATAATGACTGG
ACCGCGAGTGAGGTCACTTTCCTCCCTCTTAGACACCTCGGATGAAGCTC
CAGTTGTCGCAGCGCCTTTAGGCCGGTCTTGGCGTGCTTGGGCTCGCCGG
CAAGGGGACGGGGCAATCGCCGTGTACGTACTCACGTCGCTGTTGGCCAT
CGGGCTAGTTCTGGGCTTCGTGGTGCCCCCATCTGTCGAACTCCATGGCC
CCTACCGGAGGATCTCGGCTGTGATCGGGTGGACGTACTTCTGCAGCTGG
AGCGTGTCGTTCTACCCCCAGGTGCTGCTGAACTTTCGGAGGAAGACGAG
CGTCGGGCTGTCGTTTGACTTCCTCGTGTACAACGTGCTCGCGTTTTCTT
GCTACGCCGCCTTCACCGCTGGAGCGTGTCGTTCTACCCCCAGGTGCTGC
TGAACTTTCGGAGGAAGACGAGCGTCGGGCTGTCGTTTGACTTCCTCGTG
TACAACGTGCTCGCGTTTTCTTGCTACGCCGCCTTCACCGCCTCGCTGTA
CTGGTCGAACACGGTGAAGCGGGCGTACGACAAGCGGCACGGGGGACAGG
GCAGCAAAGTGCAGCTGAACGACGCCGTCTTCGCCCTGCACGCGCTTTTT
ATTACCCTCGTCACCCTGGCGCAGCCTCGCTGTACTGGTCGAACACGGTG
AAGCGGGCGTACGACAAGCGGCACGGGGGACAGGGCAGCAAAGTGCAGCT
GAACGACGCCGTCTTCGCCCTGCACGCGCTTTTTATTACCCTCGTCACCC
TGGCGCAGGTAATTTACTACGATTGGCGAACGGGTAGGCAACGACCATCT
TTCGCTGCCGTGGTGACCTGCAGCCTCATCGTCACGTGCGCCTCGGTCTA
CGCGGTGGCGGTGGCGAGTGCGCGCTTGGCGTGGGGTGCGGGCGGGGAAG
ATTCGTCGGAAAGCGAAGTCGCGCTCCTGAACTGGCTGGACTTTCTCTAC
TTCCTGTCCTACGTGAAGGTAATTTACTACGATTGGCGAACGGGTAGGCA
ACGACCATCTTTCGCTGCCGTGGTGACCTGCAGCCTCATCGTCACGTGCG
CCTCGGTCTACGCGGTGGCGGTGGCGAGTGCGCGCTTGGCGTGGGGTGCG
GGCGGGGAAGATTCGTCGGAAAGCGAAGTCGCGCTCCTGAACTGGCTGGA
CTTTCTCTACTTCCTGTCCTACGTGAAGATAGCCGTGACGATCCTCAAGT
ATGTGCCGCAGGCCGTTCTCAATACGAAGAGGCGAAGCACGAAGGGGTGG
GCCATCTGGAACGTCATCCTCGACTTCACCGGGGGGTTGCTCAGCGTCGT
GCAGATAGCCGTGACGATCCTCAAGTATGTGCCGCAGGCCGTTCTCAATA
CGAAGAGGCGAAGCACGAAGGGGTGGGCCATCTGGAACGTCATCCTCGAC
TTCACCGGGGGGTTGCTCAGCGTCGTGCAGCTTGTTCTAGATTGCTGGAA
TACCGGCGATTGGGGGGGCATCCGAGGTTACCCGGTCAAGTTCGCCATCG
GCTTCGTGAGCGTTTTTTTCGACATCGTCTTCATGTTTCAGCTTGTTCTA
GATTGCTGGAATACCGGCGATTGGGGGGGCATCCGAGGTTACCCGGTCAA
GTTCGCCATCGGCTTCGTGAGCGTTTTTTTCGACATCGTCTTCATGTTTC
AG
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