mRNA_S-dermatodea_contig11243.799.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11243.799.1 vs. uniprot
Match: D8LG69_ECTSI (Glutaminyl-tRNA synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG69_ECTSI) HSP 1 Score: 221 bits (564), Expect = 6.190e-68 Identity = 123/157 (78.34%), Postives = 136/157 (86.62%), Query Frame = 1
Query: 1 LKPTYGLVPRHGLIAYASSLDTPGILARSVLDSAMVLDVIAGEDPNDSTCIPSGDG-AASGSFATALLGR---GTQSS--LDGVTVGIPKEFNVKELDAGVREAWEHTAGMAADLGAVVVEVSLPSVPQALAAYAVIASAEASSNLSRYDGLRYGAR 453
LKPTYGL+PRHGLIAYASSLDTPG+LARS+LD+AMVLDV+AG D DSTCIP+G G A G FA+ LLG G+ SS L+GVTVGIPKEFNV+ELDAGVREAWE+TA AA LGA VVEV +PSVPQALAAYAV+ASAEASSNLSRYDGLRYGAR
Sbjct: 225 LKPTYGLIPRHGLIAYASSLDTPGVLARSILDAAMVLDVVAGPDSRDSTCIPAGKGRAGGGGFASDLLGAAAAGSSSSWPLEGVTVGIPKEFNVEELDAGVREAWENTARTAAALGAAVVEVFMPSVPQALAAYAVLASAEASSNLSRYDGLRYGAR 381
BLAST of mRNA_S-dermatodea_contig11243.799.1 vs. uniprot
Match: A0A6H5KIR5_9PHAE (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIR5_9PHAE) HSP 1 Score: 220 bits (561), Expect = 3.200e-66 Identity = 123/157 (78.34%), Postives = 135/157 (85.99%), Query Frame = 1
Query: 1 LKPTYGLVPRHGLIAYASSLDTPGILARSVLDSAMVLDVIAGEDPNDSTCIPSGDG-AASGSFATALL---GRGTQSS--LDGVTVGIPKEFNVKELDAGVREAWEHTAGMAADLGAVVVEVSLPSVPQALAAYAVIASAEASSNLSRYDGLRYGAR 453
LKPTYGL+PRHGLIAYASSLDTPG+LARSVLD+AMVLDV+AG DP DSTCIP+G G A G FA+ LL G+ SS L+GVTVGIPKEFNV+ELD GVREAWE+TA AA LGA VVEVS+ SVPQALAAYAV+ASAEASSNLSRYDGLRYGAR
Sbjct: 204 LKPTYGLIPRHGLIAYASSLDTPGVLARSVLDAAMVLDVVAGPDPKDSTCIPAGKGHAGGGGFASDLLKAAAAGSSSSWPLEGVTVGIPKEFNVEELDVGVREAWENTARTAAALGATVVEVSMSSVPQALAAYAVLASAEASSNLSRYDGLRYGAR 360
BLAST of mRNA_S-dermatodea_contig11243.799.1 vs. uniprot
Match: W7TVN2_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVN2_9STRA) HSP 1 Score: 149 bits (376), Expect = 3.000e-39 Identity = 85/161 (52.80%), Postives = 108/161 (67.08%), Query Frame = 1
Query: 1 LKPTYGLVPRHGLIAYASSLDTPGILARSVLDSAMVLDVIAGEDPNDSTCI-----PSGDGAASGSFATALLGRGTQSSLDGVTVGIPKEFNVKELDAGVREAWEHTAGMAADLGAVVVEVSLPSVPQALAAYAVIASAEASSNLSRYDGLRYGARAEEAI 468
LKPTYG V RHGLIAYASSLD PG+L R+V D+A+VLDV+AG DP DSTC+ P D + ++ G SL G+ VGIP EF ++EL+ AWE A + D GA V+ VS+PS+P AL Y VIA AEASSNL+RYDG+R+G R +++
Sbjct: 266 LKPTYGRVSRHGLIAYASSLDCPGVLTRTVADAALVLDVVAGRDPLDSTCLEQPHRPCFDRTMEAAASSRAAGLAV--SLRGLKVGIPAEFAIQELEGSAVTAWEEGARLLRDAGADVLPVSVPSIPLALPTYFVIACAEASSNLARYDGIRFGFRGSKSL 424
BLAST of mRNA_S-dermatodea_contig11243.799.1 vs. uniprot
Match: A0A7S3XY74_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY74_HETAK) HSP 1 Score: 135 bits (341), Expect = 1.790e-37 Identity = 79/154 (51.30%), Postives = 106/154 (68.83%), Query Frame = 1
Query: 1 LKPTYGLVPRHGLIAYASSLDTPGILARSVLDSAMVLDVIAGEDPNDSTCIP-----SGDGAASGSFATALLGRGTQSSLDGVTVGIPKEFNVKELDAGVREAWEHTAGMAADLGAVVVEVSLPSVPQALAAYAVIASAEASSNLSRYDGLRYG 447
LKPTYG + RHGLIAYASSLDT G+LARS D A++LD AG DP DSTC+ + AA G G+ + SSL G +GIP+EF+++ ++ + AW+ T + + GA +V +SLP+VP A+ AY V+ASAEA+SNL+RYDG+RYG
Sbjct: 16 LKPTYGRISRHGLIAYASSLDTVGVLARSAADCAVLLDAAAGPDPLDSTCLRECLKVNHFKAAVGITEETPTGK-SLSSLKGFRIGIPQEFHIEGMEDEIVRAWDDTVHILSAGGAEIVPLSLPTVPFAVPAYIVLASAEAASNLARYDGIRYG 168
BLAST of mRNA_S-dermatodea_contig11243.799.1 vs. uniprot
Match: A0A6B2L2T2_9EUKA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L2T2_9EUKA) HSP 1 Score: 136 bits (343), Expect = 3.700e-35 Identity = 82/149 (55.03%), Postives = 99/149 (66.44%), Query Frame = 1
Query: 1 LKPTYGLVPRHGLIAYASSLDTPGILARSVLDSAMVLDVIAGEDPNDSTCIPSGDGAASGSFATALLGRGTQSSLDGVTVGIPKEFNVKELDAGVREAWEHTAGMAADLGAVVVEVSLPSVPQALAAYAVIASAEASSNLSRYDGLRYG 447
LKP+YGL R+GL++YASSLDTP I R+V DSA++LD+IAG DPNDST I + AT + Q L GVTVGIP E NV+EL + +AW G GA V VSLP++ AL AY +IA AEASSNL+RYDGLRYG
Sbjct: 186 LKPSYGLCSRYGLVSYASSLDTPAIFTRTVEDSALLLDIIAGYDPNDSTSIKNP--------ATRNYNKDIQ-ELSGVTVGIPLECNVEELPEEIEDAWNEGIGFLKARGARVKFVSLPNMKYALPAYYIIAPAEASSNLARYDGLRYG 325
BLAST of mRNA_S-dermatodea_contig11243.799.1 vs. uniprot
Match: D0MYV2_PHYIT (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=11 Tax=Phytophthora TaxID=4783 RepID=D0MYV2_PHYIT) HSP 1 Score: 136 bits (342), Expect = 1.080e-34 Identity = 80/159 (50.31%), Postives = 100/159 (62.89%), Query Frame = 1
Query: 1 LKPTYGLVPRHGLIAYASSLDTPGILARSVLDSAMVLDVIAGEDPNDSTCIPSGDGAASGSFATALLGRGTQSS---LDGVTVGIPKEFNVKELDAGVREAWEHTAGMAADLGAVVVEVSLPSVPQALAAYAVIASAEASSNLSRYDGLRYGARAEEAI 468
LKP+YG V RHG+I+YASSLDTPGI ARSV D+ VL IAG D DSTC+ A G++ T + QS L GV VG+P E+ VKEL + W+ D GA V VSLP+ + AY ++A AEASSNLSRYDG+RYG RA++ +
Sbjct: 216 LKPSYGRVSRHGMISYASSLDTPGIFARSVGDATAVLQAIAGPDHMDSTCMTD---ALPGNWCTNTVEASQQSKKVDLTGVRVGVPAEYFVKELPEEILNVWDEGVAWLRDAGAQAVSVSLPTTKLCIPAYYILACAEASSNLSRYDGVRYGYRAKDKV 371
BLAST of mRNA_S-dermatodea_contig11243.799.1 vs. uniprot
Match: A0A1G0Y099_9BACT (Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Lentisphaerae bacterium GWF2_45_14 TaxID=1798572 RepID=A0A1G0Y099_9BACT) HSP 1 Score: 135 bits (340), Expect = 1.280e-34 Identity = 76/156 (48.72%), Postives = 106/156 (67.95%), Query Frame = 1
Query: 1 LKPTYGLVPRHGLIAYASSLDTPGILARSVLDSAMVLDVIAGEDPNDSTCIPSGDGAASGSFATALLGRGTQSSLDGVTVGIPKE-FNVKELDAGVREAWEHTAGMAADLGAVVVEVSLPSVPQALAAYAVIASAEASSNLSRYDGLRYGARAEEA 465
LKPTYG V R+GL+A+ASSLD G + SVLD+A +LD+I G DP DST +P SG+FA A+ + + +L GV +GIPKE FN+ ++ GV+ E + + LGA +E+SLP A+A Y +IA+AEAS+NL+R+DG+RYG R +A
Sbjct: 195 LKPTYGRVSRYGLVAFASSLDQIGPIGHSVLDTAAILDIIGGHDPLDSTSLPE----ESGTFADAVR-KSSGGNLKGVKIGIPKEYFNIDAIEPGVKAVMEESVNILQALGAETIEISLPHTEYAIAVYYIIATAEASANLARFDGIRYGVRPSDA 345
BLAST of mRNA_S-dermatodea_contig11243.799.1 vs. uniprot
Match: A0A8K1CS67_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CS67_PYTOL) HSP 1 Score: 135 bits (340), Expect = 2.440e-34 Identity = 81/158 (51.27%), Postives = 101/158 (63.92%), Query Frame = 1
Query: 1 LKPTYGLVPRHGLIAYASSLDTPGILARSVLDSAMVLDVIAGEDPNDSTCIPSGDGAASGSFATALLGRGTQSS----LDGVTVGIPKEFNVKELDAGVREAWEHTAGMAADLGAVVVEVSLPSVPQALAAYAVIASAEASSNLSRYDGLRYGARAEE 462
LKP+YG V RHG+I+YASSLDTPGI ARSV D+A++L IAG D DST I S A L TQSS L GV +G+P+E+ V EL + + W+ D GA VV VSLP+ + AY ++A AEASSNLSRYDG+RYG RA++
Sbjct: 237 LKPSYGRVSRHGMISYASSLDTPGIFARSVADAAIMLKAIAGSDDKDSTSIQS-------EVAQDWLNTVTQSSGRTDLSGVRIGVPEEYFVAELPEEILQVWDRGVQWLRDAGAQVVSVSLPTTKLCIPAYYILACAEASSNLSRYDGVRYGYRAKD 387
BLAST of mRNA_S-dermatodea_contig11243.799.1 vs. uniprot
Match: A0A6S8CN71_9STRA (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8CN71_9STRA) HSP 1 Score: 134 bits (338), Expect = 4.830e-34 Identity = 80/151 (52.98%), Postives = 101/151 (66.89%), Query Frame = 1
Query: 1 LKPTYGLVPRHGLIAYASSLDTPGILARSVLDSAMVLDVIAGEDPNDSTCIPSGDGAASGSFATALLGRGTQSSLDGVTVGIPKEFNVKELDAGVREAWEHTAGMAADLGAVVVEVSLPSVPQALAAYAVIASAEASSNLSRYDGLRYGAR 453
LKP+YG V R GLI YASSLDTPGILA +V ++++VLD+IAG D DST P D + +++L+GV +G+P EF V EL E W+ A M D GA VVE+S+PS+ AL AY VIASAEASSNLSRYDG+++G R
Sbjct: 258 LKPSYGRVSRWGLIPYASSLDTPGILASNVQNASLVLDIIAGPDERDSTSFPQ-DYVLHQNELKLTESIKNKTNLEGVRIGLPVEFFVDELPETTVETWKLAANMLEDAGASVVEISIPSIVDALPAYYVIASAEASSNLSRYDGVQFGFR 407
BLAST of mRNA_S-dermatodea_contig11243.799.1 vs. uniprot
Match: A0A0G4J7N4_PLABS (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J7N4_PLABS) HSP 1 Score: 133 bits (334), Expect = 6.680e-34 Identity = 82/152 (53.95%), Postives = 99/152 (65.13%), Query Frame = 1
Query: 1 LKPTYGLVPRHGLIAYASSLDTPGILARSVLDSAMVLDVIAGEDPNDST---CIPSGDGAASGSFATALLGRGTQSSLDGVTVGIPKEFNVKELDAGVREAWEHTAGMAADLGAVVVEVSLPSVPQALAAYAVIASAEASSNLSRYDGLRYG 447
+KPTYG + R GL+AYASSLD PGILA SV ++A VL+VI G DP D C P G A L G + LDG+TVGIP EFNV+EL A VR+AW+ A GA VV VS+P+V +L AY +I AEA+SNLSRYDG R+G
Sbjct: 152 MKPTYGRLSRWGLVAYASSLDCPGILATSVEETARVLEVIDGFDPRDPNAVKCEPFDAGRA-------LAANGDR--LDGITVGIPDEFNVEELTADVRQAWQTAVDWAIGAGARVVRVSMPAVRYSLPAYYIIVPAEAASNLSRYDGTRFG 294 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11243.799.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11243.799.1 >prot_S-dermatodea_contig11243.799.1 ID=prot_S-dermatodea_contig11243.799.1|Name=mRNA_S-dermatodea_contig11243.799.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=157bp LKPTYGLVPRHGLIAYASSLDTPGILARSVLDSAMVLDVIAGEDPNDSTCback to top mRNA from alignment at S-dermatodea_contig11243:4114..6320- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11243.799.1 ID=mRNA_S-dermatodea_contig11243.799.1|Name=mRNA_S-dermatodea_contig11243.799.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2207bp|location=Sequence derived from alignment at S-dermatodea_contig11243:4114..6320- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11243:4114..6320- >mRNA_S-dermatodea_contig11243.799.1 ID=mRNA_S-dermatodea_contig11243.799.1|Name=mRNA_S-dermatodea_contig11243.799.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=942bp|location=Sequence derived from alignment at S-dermatodea_contig11243:4114..6320- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |