mRNA_S-dermatodea_contig11192.771.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11192.771.1 vs. uniprot
Match: A0A6H5L3L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3L2_9PHAE) HSP 1 Score: 355 bits (912), Expect = 8.290e-109 Identity = 211/368 (57.34%), Postives = 229/368 (62.23%), Query Frame = 1
Query: 49 DVEKLFLQNQEREQALRNLLKTRPSESRDVQALRGEIRAAYSVILGMDPEFCASKDVELLLWKNCYYKRIE---------------------------------------------------------------------DFRKRLRKYSHLSGSTERSKAFEAREHLHGICLAFARFLGEAAEFYSSLLRRFEAMQHQYSNGG-----------------------------QAVGSSERRARLARLVVLSINRCFIFLGDLARYRELHGENSAKDWSGAERFYLHALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIENPFQTAHENLTLLFEKNKTKAFGVPPGGSEGGKDGFAGSGRD 858
DVEKLF +NQEREQ LR+LL+TR SESRDVQALR E+R AYS +LGMDPEFCA+KDVELLLWKNCYYKRIE DFRKR RKY L+ S ER+KA EAREHL GIC AFA FLGEA EFY SLLRRFEAMQHQY+ G A+GS + R RL RLVVLSINRCFIFLGDLARYREL +S KDWS AER+Y ALAVLPTSGNPHNQLA+LATYTDAECVSVYRYCRSLMIE+PFQTAHENLTLLFEKNK K FG+P EGGK+ G GR+
Sbjct: 6 DVEKLFAENQEREQHLRDLLRTRHSESRDVQALRAEMRGAYSEMLGMDPEFCAAKDVELLLWKNCYYKRIEASTTKKTCHSAGCYLFPLCPLCTLRVSALSLGTPHGGYVGGLPFVFVFSLAVPRVSSNPPLDRSPSPSQDFRKRSRKYDQLAASLERAKALEAREHLEGICQAFASFLGEATEFYRSLLRRFEAMQHQYAKGAGVGGGKGXXXXXXXXXXXXXXXXXXXXAPAAIGSGDGRTRLERLVVLSINRCFIFLGDLARYRELL-RDSVKDWSTAERYYHQALAVLPTSGNPHNQLALLATYTDAECVSVYRYCRSLMIESPFQTAHENLTLLFEKNK-KGFGMPA--LEGGKE-SRGGGRE 368
BLAST of mRNA_S-dermatodea_contig11192.771.1 vs. uniprot
Match: D7FXG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXG2_ECTSI) HSP 1 Score: 320 bits (820), Expect = 3.300e-99 Identity = 178/268 (66.42%), Postives = 190/268 (70.90%), Query Frame = 1
Query: 49 DVEKLFLQNQEREQALRNLLKTRPSESRDVQALRGEIRAAYSVILGMDPEFCASKDVELLLWKNCYYKRIEDFRKRLRKYSHLSGSTERSKAFEAREHLHGICLAFARFLGEAAEFYSSLLRRFEAMQHQYSNGGQ--AVGSSERRARLARLVVLSINRCFIFLGDLARYRELHGENSAKDWSGAERFYLHALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIENPFQTAHENLTLLFEKNKTKAFGVPPGGSEGGKDGFAG 846
DVEKLF +NQEREQ LRNLLKTRPSESRDVQALR E+R AYS ILGMDPEFCA+KDVELLLWKNCYYKRIE STE+ F G C GG A+GSS+R+ RL RLVVLSINRCFIFLGDLARYRELHGENS KDWS AER+Y ALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMI++PFQTAHENLTLLFEKNK K FG+P EGGK+ G
Sbjct: 6 DVEKLFAENQEREQELRNLLKTRPSESRDVQALRAEMRGAYSEILGMDPEFCAAKDVELLLWKNCYYKRIE-------------ASTEKYILF-------GEC----------------------------GRGGPPAAIGSSDRKTRLVRLVVLSINRCFIFLGDLARYRELHGENSVKDWSSAERYYHQALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIDSPFQTAHENLTLLFEKNKQKGFGMPA--LEGGKESLGG 223
BLAST of mRNA_S-dermatodea_contig11192.771.1 vs. uniprot
Match: A0A835Z7T1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T1_9STRA) HSP 1 Score: 239 bits (611), Expect = 3.630e-74 Identity = 129/242 (53.31%), Postives = 166/242 (68.60%), Query Frame = 1
Query: 76 QEREQALRNLLKTRPSESRDVQALRGEIRAAYSVILGMDPEFCASKDVELLLWKNCYYKRIEDFRKRLRKYSHLSGSTERSKAFEAREHLHGICLAFARFLGEAAEFYSSLLRRFEA-MQH--QYSNGGQAVGSSERRARLARLVVLSINRCFIFLGDLARYRELHGENSAKDWSGAERFYLHALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIENPFQTAHENLTLLFEKNKTK 792
Q +E L+ L K++ ++ AL+ +IR Y+ +L DP F A+ DVE+ LW++CYYKRIEDFRKR RKY++ + + + A REHLH IC+ F RFL +A FY++LL ++A + H Q GS AR+ +L SI+RC IF+GDLARYRELH E DWS AE++Y ALA +P GNPHNQ+AVLATYTDAECV+VYRYCRSL+I +PF TA ENL LLFEKNK K
Sbjct: 15 QAKEAQLKALSKSKNFDTAAAYALQDDIRHCYADVLAADPLFAATNDVEMALWRSCYYKRIEDFRKRTRKYANHAVPSGDALA---REHLHRICMDFQRFLADATAFYATLLTAYDAELAHLRQQLQLAPHEGSHPESARIDKLSQ-SIHRCLIFMGDLARYRELHSEAQTPDWSHAEQYYQRALAAMPHGGNPHNQMAVLATYTDAECVAVYRYCRSLLIRHPFMTARENLALLFEKNKQK 252
BLAST of mRNA_S-dermatodea_contig11192.771.1 vs. uniprot
Match: K3X593_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X593_GLOUD) HSP 1 Score: 211 bits (536), Expect = 9.110e-59 Identity = 119/264 (45.08%), Postives = 159/264 (60.23%), Query Frame = 1
Query: 43 AQDVEKLFLQNQEREQALRNLLKTRPSESRDVQALRGEIRAAYSVILGMDPEFCASKDVELLLWKNCYYKRIEDFRKRLRKYSHLSGSTERSKAFEAREHLHGICLAFARFLGEAAEFYSSLLRRFEA------MQHQYSNGGQAVGSSERRARLARLVVL---SINRCFIFLGDLARYRELHGENSAKDWSGAERFYLHALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIENPFQTAHENLTLLFEKNKTKAFGVP 807
A D +L+ + E E+ LR LL+ P S+D LR + I + P F ASK++E LWK C+YKRIEDFR+R+RKY+ + S +RS REH + F RFL E++ FY L + A + SN + S+ + S++RCFIFLGDLARYRELH + + K+++ AE FY ALA+LP +GNPHNQLAVLATY +AE V+VYRYCRSL+I PF TA ENL LLFE+++ + P
Sbjct: 2 ATDPRRLYREIVEVEKQLRELLRANPLNSQDANVLRSRLVEKAKAIADVSPAFAASKEIEQALWKPCFYKRIEDFRRRIRKYA-SAPSNDRS----VREHFARVSTEFQRFLNESSAFYEHLRDAYAAWLSTNRVSRIASNSAPSFTSNVPAGAAQDAIPRCRQSLHRCFIFLGDLARYRELHSQKAKKNFAAAESFYYKALALLPENGNPHNQLAVLATYVEAETVAVYRYCRSLLIAQPFATAEENLALLFERSRQRPLAAP 260
BLAST of mRNA_S-dermatodea_contig11192.771.1 vs. uniprot
Match: A0A3R7NMQ1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NMQ1_9STRA) HSP 1 Score: 201 bits (510), Expect = 1.810e-58 Identity = 115/263 (43.73%), Postives = 165/263 (62.74%), Query Frame = 1
Query: 49 DVEKLFLQNQEREQALRNLLKTRPSESRDVQALRGEIRAAYSVILGMDPEFCASKDVELLLWKNCYYKRIEDFRKRLRKYSHLSGSTERSKAFEAREHLHGICLAFARFLGEAAEFYSSLLRRFEAMQHQYSNGGQAVGSSERR------ARLARLVVL---SINRCFIFLGDLARYRELHGENSAKDWSGAERFYLHALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIENPFQTAHENLTLLFEKNKTKAFGVPP 810
D + +++ ++ LR LL+ P ++D ALR + A + ++ +P F ASK+VE LWK C+Y+RIEDFR+R+RKY+ + +R+ REH + F FL EAA FY+ L F Q +N ++ +S R + +A+ + S++RC++FLGDLARYRELH + + K+++ AE Y ALAVLP +GNPHNQLAVLATY +AE V+VYRYCRSL+ PF TA ENL LLFE+++ + VPP
Sbjct: 2 DPRRAYMELVTLDKQLRELLRANPLNAQDANALRRRLMGAATRLVDANPAFGASKEVEQALWKPCFYRRIEDFRRRIRKYA-AAAQADRN----VREHFARVSSEFQSFLTEAAAFYAHLRDVFA--QWLLNNRVSSITASTSRDLTKDGSEMAKNIARCRQSLHRCYVFLGDLARYRELHSQKAKKNFAAAEALYHRALAVLPENGNPHNQLAVLATYIEAETVAVYRYCRSLLTAQPFVTAEENLALLFERSRQRPL-VPP 256
BLAST of mRNA_S-dermatodea_contig11192.771.1 vs. uniprot
Match: A0A2D4C910_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C910_PYTIN) HSP 1 Score: 208 bits (530), Expect = 8.170e-58 Identity = 118/261 (45.21%), Postives = 162/261 (62.07%), Query Frame = 1
Query: 49 DVEKLFLQNQEREQALRNLLKTRPSESRDVQALRGEIRAAYSVILGMDPEFCASKDVELLLWKNCYYKRIEDFRKRLRKYSHLSGSTERSKAFEAREHLHGICLAFARFLGEAAEFYSSLLRRFEA--MQHQYSNGGQAVGSSERR---ARLARLVVL---SINRCFIFLGDLARYRELHGENSAKDWSGAERFYLHALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIENPFQTAHENLTLLFEKNKTKAFGVP 807
D +L+ + E E+ LR+LL++ P D LR + + + P F A++++E LWK C+YKR EDFR+R+RKY+ S S +RS REH + F FL +AA FY SL + +QH+ S A SS + A A+ V S++RC +FLGDLARYRELH + + K+++ AE+FY AL+VLP +GNPHNQLAVLATY +AE V+VYRYCRSL+I PF TA ENL LLFE+++ + P
Sbjct: 2 DPRRLYREIVEIEKQLRDLLRSNPLNVHDANLLRSRLTEKAQQLTDVSPAFAAAREIEQALWKPCFYKRXEDFRRRIRKYATASAS-DRS----VREHFARVSAEFQAFLTDAAAFYESLRASWTQWLVQHRVSRIASASXSSSSQLSDAEAAQQVERCRHSLHRCLVFLGDLARYRELHNQKARKNFAAAEQFYFRALSVLPENGNPHNQLAVLATYVEAETVAVYRYCRSLLIAQPFATAEENLALLFERSRQRPLAPP 257
BLAST of mRNA_S-dermatodea_contig11192.771.1 vs. uniprot
Match: A0A8K1C7Y5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7Y5_PYTOL) HSP 1 Score: 207 bits (526), Expect = 2.520e-57 Identity = 113/259 (43.63%), Postives = 166/259 (64.09%), Query Frame = 1
Query: 49 DVEKLFLQNQEREQALRNLLKTRPSESRDVQALRGEIRAAYSVILGMDPEFCASKDVELLLWKNCYYKRIEDFRKRLRKYSHLSGSTERSKAFEAREHLHGICLAFARFLGEAAEFYSSLLRRFEA--MQHQYS----NGGQAVGSSERRARLARLVVLSINRCFIFLGDLARYRELHGENSAKDWSGAERFYLHALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIENPFQTAHENLTLLFEKNKTKAFGVP 807
D +L+ + + E+ LR LL++ P ++D LR + ++ + P F A++++E +LWK C+YKRIEDFR+R+RKY+ + ST+R+ REH + F FL +A+ FY +L +Q++ S +G + +SE A + + S++RC +FLGDLARYRELHG+ + K+++ AE FY ALAV+P +GNPHNQLAVLATY +AE V+VYRYCRSL+I PF TA ENL LLFE+ + + P
Sbjct: 2 DPRRLYREIVDVEKQLRELLRSNPLNAQDANVLRSRLMEKARILTQVSPTFAAARELEQVLWKPCFYKRIEDFRRRIRKYA-SAPSTDRT----VREHFARVSNEFQEFLTDASAFYENLRESLTRWLLQNRVSRIAASGPSSAAASEAGANIDKCRQ-SLHRCLVFLGDLARYRELHGQKAKKNFAAAENFYNKALAVIPENGNPHNQLAVLATYVEAETVAVYRYCRSLLIAQPFVTAEENLALLFERARQRPLAPP 254
BLAST of mRNA_S-dermatodea_contig11192.771.1 vs. uniprot
Match: A0A6A4FXL6_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FXL6_9STRA) HSP 1 Score: 205 bits (521), Expect = 1.160e-56 Identity = 112/254 (44.09%), Postives = 156/254 (61.42%), Query Frame = 1
Query: 49 DVEKLFLQNQEREQALRNLLKTRPSESRDVQALRGEIRAAYSVILGMDPEFCASKDVELLLWKNCYYKRIEDFRKRLRKYSHLSGSTERSKAFEAREHLHGICLAFARFLGEAAEFYSSLLRRFEA-MQHQYSNGGQAVGSSERRARLARLVVLSINRCFIFLGDLARYRELHGENSAKDWSGAERFYLHALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIENPFQTAHENLTLLFEKNKTKAFGVP 807
D + +++ ++ LR+LL+ P ++D ALR + A + + P F A+K+VE LWK C+Y+RIEDFR+R+RKY+ + + + REH + F +FL EAA FY+ L F +Q GG A R R S++RC++FLGDLARYRELH + + K+++ AE Y ALAVLP +GNPHNQLAVLATY +AE V+VYRYCRSL+ PF TA ENL LLFE+++ + P
Sbjct: 2 DPRRAYMELVALDKQLRDLLRANPLNAQDANALRRRLVDAATRLADAHPAFAAAKEVEQALWKPCFYRRIEDFRRRIRKYAAAAQADPK-----VREHFARVSSEFQQFLMEAAGFYAHLRDVFALWLQRNRLEGGVATEDGAARCRQ------SLHRCYVFLGDLARYRELHSQKAKKNFAAAEALYHRALAVLPENGNPHNQLAVLATYVEAETVAVYRYCRSLLTSQPFTTAEENLALLFERSRQRPLAAP 244
BLAST of mRNA_S-dermatodea_contig11192.771.1 vs. uniprot
Match: H3GRP2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GRP2_PHYRM) HSP 1 Score: 204 bits (519), Expect = 6.380e-56 Identity = 116/263 (44.11%), Postives = 161/263 (61.22%), Query Frame = 1
Query: 22 GASGVMAAQDVEKLFLQNQEREQALRNLLKTRPSESRDVQALRGEIRAAYSVILGMDPEFCASKDVELLLWKNCYYKRIEDFRKRLRKYSHLSGSTERSKAFEAREHLHGICLAFARFLGEAAEFYSSLLRRFEA-MQHQYSNGGQAVGSSERRARLARLVVLSINRCFIFLGDLARYRELHGENSAKDWSGAERFYLHALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIENPFQTAHENLTLLFEKNKTKAFGVP 807
GA A D +++ ++ LR+LL+ P + + ALR + A + ++ P F A+K+VE LWK C+Y+RIEDFR+R+RKY+ + +R+ REH + F +FL EAA FY+ L F + +QH NG A R R S++RC++FLGDLARYRELH + + K+++ AE Y ALAVLP +GNPHNQLAVLATY +AE V+VYRYCRSL+ PF TA ENL LLFE+++ + P
Sbjct: 330 GAPKANEAMDPRSTYMELAALDKQLRDLLRANPLDLQAANALRRRLTDAATRLVDAQPAFAAAKEVEQALWKPCFYRRIEDFRRRIRKYA-AAAQADRN----VREHFARVSSEFQQFLTEAAGFYAHLRDVFASWLQH---NGQGAKDEDVTRCRQ------SLHRCYVFLGDLARYRELHSQKTKKNFAAAEALYHRALAVLPENGNPHNQLAVLATYVEAETVAVYRYCRSLLTSQPFTTAEENLALLFERSRQRPLAAP 578
BLAST of mRNA_S-dermatodea_contig11192.771.1 vs. uniprot
Match: A0A3M6VGA0_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VGA0_9STRA) HSP 1 Score: 202 bits (515), Expect = 7.780e-56 Identity = 110/238 (46.22%), Postives = 147/238 (61.76%), Query Frame = 1
Query: 94 LRNLLKTRPSESRDVQALRGEIRAAYSVILGMDPEFCASKDVELLLWKNCYYKRIEDFRKRLRKYSHLSGSTERSKAFEAREHLHGICLAFARFLGEAAEFYSSLLRRFEAMQHQYSNGGQAVGSSERRARLARLVVLSINRCFIFLGDLARYRELHGENSAKDWSGAERFYLHALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIENPFQTAHENLTLLFEKNKTKAFGVP 807
LR+LL+ P +D LR ++ A ++ EF SK+VEL LWK C+Y+RIEDFR+R+RKY+ + T+R+ REH + F +FL EA+ FY+ L F Q SS+ +AR S++RC++FLGDLARYRELH + K+++ AE Y ALAVLP +GNPHNQLAVLATY +AE V+VY YCRSL+ PF TA ENL LLFE+ + + P
Sbjct: 8 LRDLLRANPLNVQDANVLRRQLMDAVIQMIDTHIEFAVSKEVELALWKPCFYRRIEDFRRRIRKYA-ATAQTDRN----VREHFARVSSEFQQFLTEASAFYTYLSNVFATWLQQNQPKAAIAESSDVATNVARCRQ-SLHRCYVFLGDLARYRELHSQKVKKNFAAAEALYHRALAVLPENGNPHNQLAVLATYVEAETVAVYHYCRSLLTSQPFTTAEENLALLFERTRQRPLAAP 239 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11192.771.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11192.771.1 >prot_S-dermatodea_contig11192.771.1 ID=prot_S-dermatodea_contig11192.771.1|Name=mRNA_S-dermatodea_contig11192.771.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=288bp AWDLGGEGASGVMAAQDVEKLFLQNQEREQALRNLLKTRPSESRDVQALRback to top mRNA from alignment at S-dermatodea_contig11192:1055..5397+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11192.771.1 ID=mRNA_S-dermatodea_contig11192.771.1|Name=mRNA_S-dermatodea_contig11192.771.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4343bp|location=Sequence derived from alignment at S-dermatodea_contig11192:1055..5397+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11192:1055..5397+ >mRNA_S-dermatodea_contig11192.771.1 ID=mRNA_S-dermatodea_contig11192.771.1|Name=mRNA_S-dermatodea_contig11192.771.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1728bp|location=Sequence derived from alignment at S-dermatodea_contig11192:1055..5397+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |