mRNA_S-dermatodea_contig11192.771.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11192.771.1
Unique NamemRNA_S-dermatodea_contig11192.771.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig11192.771.1 vs. uniprot
Match: A0A6H5L3L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3L2_9PHAE)

HSP 1 Score: 355 bits (912), Expect = 8.290e-109
Identity = 211/368 (57.34%), Postives = 229/368 (62.23%), Query Frame = 1
Query:   49 DVEKLFLQNQEREQALRNLLKTRPSESRDVQALRGEIRAAYSVILGMDPEFCASKDVELLLWKNCYYKRIE---------------------------------------------------------------------DFRKRLRKYSHLSGSTERSKAFEAREHLHGICLAFARFLGEAAEFYSSLLRRFEAMQHQYSNGG-----------------------------QAVGSSERRARLARLVVLSINRCFIFLGDLARYRELHGENSAKDWSGAERFYLHALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIENPFQTAHENLTLLFEKNKTKAFGVPPGGSEGGKDGFAGSGRD 858
            DVEKLF +NQEREQ LR+LL+TR SESRDVQALR E+R AYS +LGMDPEFCA+KDVELLLWKNCYYKRIE                                                                     DFRKR RKY  L+ S ER+KA EAREHL GIC AFA FLGEA EFY SLLRRFEAMQHQY+ G                               A+GS + R RL RLVVLSINRCFIFLGDLARYREL   +S KDWS AER+Y  ALAVLPTSGNPHNQLA+LATYTDAECVSVYRYCRSLMIE+PFQTAHENLTLLFEKNK K FG+P    EGGK+   G GR+
Sbjct:    6 DVEKLFAENQEREQHLRDLLRTRHSESRDVQALRAEMRGAYSEMLGMDPEFCAAKDVELLLWKNCYYKRIEASTTKKTCHSAGCYLFPLCPLCTLRVSALSLGTPHGGYVGGLPFVFVFSLAVPRVSSNPPLDRSPSPSQDFRKRSRKYDQLAASLERAKALEAREHLEGICQAFASFLGEATEFYRSLLRRFEAMQHQYAKGAGVGGGKGXXXXXXXXXXXXXXXXXXXXAPAAIGSGDGRTRLERLVVLSINRCFIFLGDLARYRELL-RDSVKDWSTAERYYHQALAVLPTSGNPHNQLALLATYTDAECVSVYRYCRSLMIESPFQTAHENLTLLFEKNK-KGFGMPA--LEGGKE-SRGGGRE 368          
BLAST of mRNA_S-dermatodea_contig11192.771.1 vs. uniprot
Match: D7FXG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXG2_ECTSI)

HSP 1 Score: 320 bits (820), Expect = 3.300e-99
Identity = 178/268 (66.42%), Postives = 190/268 (70.90%), Query Frame = 1
Query:   49 DVEKLFLQNQEREQALRNLLKTRPSESRDVQALRGEIRAAYSVILGMDPEFCASKDVELLLWKNCYYKRIEDFRKRLRKYSHLSGSTERSKAFEAREHLHGICLAFARFLGEAAEFYSSLLRRFEAMQHQYSNGGQ--AVGSSERRARLARLVVLSINRCFIFLGDLARYRELHGENSAKDWSGAERFYLHALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIENPFQTAHENLTLLFEKNKTKAFGVPPGGSEGGKDGFAG 846
            DVEKLF +NQEREQ LRNLLKTRPSESRDVQALR E+R AYS ILGMDPEFCA+KDVELLLWKNCYYKRIE              STE+   F       G C                              GG   A+GSS+R+ RL RLVVLSINRCFIFLGDLARYRELHGENS KDWS AER+Y  ALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMI++PFQTAHENLTLLFEKNK K FG+P    EGGK+   G
Sbjct:    6 DVEKLFAENQEREQELRNLLKTRPSESRDVQALRAEMRGAYSEILGMDPEFCAAKDVELLLWKNCYYKRIE-------------ASTEKYILF-------GEC----------------------------GRGGPPAAIGSSDRKTRLVRLVVLSINRCFIFLGDLARYRELHGENSVKDWSSAERYYHQALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIDSPFQTAHENLTLLFEKNKQKGFGMPA--LEGGKESLGG 223          
BLAST of mRNA_S-dermatodea_contig11192.771.1 vs. uniprot
Match: A0A835Z7T1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T1_9STRA)

HSP 1 Score: 239 bits (611), Expect = 3.630e-74
Identity = 129/242 (53.31%), Postives = 166/242 (68.60%), Query Frame = 1
Query:   76 QEREQALRNLLKTRPSESRDVQALRGEIRAAYSVILGMDPEFCASKDVELLLWKNCYYKRIEDFRKRLRKYSHLSGSTERSKAFEAREHLHGICLAFARFLGEAAEFYSSLLRRFEA-MQH--QYSNGGQAVGSSERRARLARLVVLSINRCFIFLGDLARYRELHGENSAKDWSGAERFYLHALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIENPFQTAHENLTLLFEKNKTK 792
            Q +E  L+ L K++  ++    AL+ +IR  Y+ +L  DP F A+ DVE+ LW++CYYKRIEDFRKR RKY++ +  +  + A   REHLH IC+ F RFL +A  FY++LL  ++A + H  Q        GS    AR+ +L   SI+RC IF+GDLARYRELH E    DWS AE++Y  ALA +P  GNPHNQ+AVLATYTDAECV+VYRYCRSL+I +PF TA ENL LLFEKNK K
Sbjct:   15 QAKEAQLKALSKSKNFDTAAAYALQDDIRHCYADVLAADPLFAATNDVEMALWRSCYYKRIEDFRKRTRKYANHAVPSGDALA---REHLHRICMDFQRFLADATAFYATLLTAYDAELAHLRQQLQLAPHEGSHPESARIDKLSQ-SIHRCLIFMGDLARYRELHSEAQTPDWSHAEQYYQRALAAMPHGGNPHNQMAVLATYTDAECVAVYRYCRSLLIRHPFMTARENLALLFEKNKQK 252          
BLAST of mRNA_S-dermatodea_contig11192.771.1 vs. uniprot
Match: K3X593_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X593_GLOUD)

HSP 1 Score: 211 bits (536), Expect = 9.110e-59
Identity = 119/264 (45.08%), Postives = 159/264 (60.23%), Query Frame = 1
Query:   43 AQDVEKLFLQNQEREQALRNLLKTRPSESRDVQALRGEIRAAYSVILGMDPEFCASKDVELLLWKNCYYKRIEDFRKRLRKYSHLSGSTERSKAFEAREHLHGICLAFARFLGEAAEFYSSLLRRFEA------MQHQYSNGGQAVGSSERRARLARLVVL---SINRCFIFLGDLARYRELHGENSAKDWSGAERFYLHALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIENPFQTAHENLTLLFEKNKTKAFGVP 807
            A D  +L+ +  E E+ LR LL+  P  S+D   LR  +      I  + P F ASK++E  LWK C+YKRIEDFR+R+RKY+  + S +RS     REH   +   F RFL E++ FY  L   + A      +    SN   +  S+         +     S++RCFIFLGDLARYRELH + + K+++ AE FY  ALA+LP +GNPHNQLAVLATY +AE V+VYRYCRSL+I  PF TA ENL LLFE+++ +    P
Sbjct:    2 ATDPRRLYREIVEVEKQLRELLRANPLNSQDANVLRSRLVEKAKAIADVSPAFAASKEIEQALWKPCFYKRIEDFRRRIRKYA-SAPSNDRS----VREHFARVSTEFQRFLNESSAFYEHLRDAYAAWLSTNRVSRIASNSAPSFTSNVPAGAAQDAIPRCRQSLHRCFIFLGDLARYRELHSQKAKKNFAAAESFYYKALALLPENGNPHNQLAVLATYVEAETVAVYRYCRSLLIAQPFATAEENLALLFERSRQRPLAAP 260          
BLAST of mRNA_S-dermatodea_contig11192.771.1 vs. uniprot
Match: A0A3R7NMQ1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NMQ1_9STRA)

HSP 1 Score: 201 bits (510), Expect = 1.810e-58
Identity = 115/263 (43.73%), Postives = 165/263 (62.74%), Query Frame = 1
Query:   49 DVEKLFLQNQEREQALRNLLKTRPSESRDVQALRGEIRAAYSVILGMDPEFCASKDVELLLWKNCYYKRIEDFRKRLRKYSHLSGSTERSKAFEAREHLHGICLAFARFLGEAAEFYSSLLRRFEAMQHQYSNGGQAVGSSERR------ARLARLVVL---SINRCFIFLGDLARYRELHGENSAKDWSGAERFYLHALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIENPFQTAHENLTLLFEKNKTKAFGVPP 810
            D  + +++    ++ LR LL+  P  ++D  ALR  +  A + ++  +P F ASK+VE  LWK C+Y+RIEDFR+R+RKY+  +   +R+     REH   +   F  FL EAA FY+ L   F   Q   +N   ++ +S  R      + +A+ +     S++RC++FLGDLARYRELH + + K+++ AE  Y  ALAVLP +GNPHNQLAVLATY +AE V+VYRYCRSL+   PF TA ENL LLFE+++ +   VPP
Sbjct:    2 DPRRAYMELVTLDKQLRELLRANPLNAQDANALRRRLMGAATRLVDANPAFGASKEVEQALWKPCFYRRIEDFRRRIRKYA-AAAQADRN----VREHFARVSSEFQSFLTEAAAFYAHLRDVFA--QWLLNNRVSSITASTSRDLTKDGSEMAKNIARCRQSLHRCYVFLGDLARYRELHSQKAKKNFAAAEALYHRALAVLPENGNPHNQLAVLATYIEAETVAVYRYCRSLLTAQPFVTAEENLALLFERSRQRPL-VPP 256          
BLAST of mRNA_S-dermatodea_contig11192.771.1 vs. uniprot
Match: A0A2D4C910_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C910_PYTIN)

HSP 1 Score: 208 bits (530), Expect = 8.170e-58
Identity = 118/261 (45.21%), Postives = 162/261 (62.07%), Query Frame = 1
Query:   49 DVEKLFLQNQEREQALRNLLKTRPSESRDVQALRGEIRAAYSVILGMDPEFCASKDVELLLWKNCYYKRIEDFRKRLRKYSHLSGSTERSKAFEAREHLHGICLAFARFLGEAAEFYSSLLRRFEA--MQHQYSNGGQAVGSSERR---ARLARLVVL---SINRCFIFLGDLARYRELHGENSAKDWSGAERFYLHALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIENPFQTAHENLTLLFEKNKTKAFGVP 807
            D  +L+ +  E E+ LR+LL++ P    D   LR  +      +  + P F A++++E  LWK C+YKR EDFR+R+RKY+  S S +RS     REH   +   F  FL +AA FY SL   +    +QH+ S    A  SS  +   A  A+ V     S++RC +FLGDLARYRELH + + K+++ AE+FY  AL+VLP +GNPHNQLAVLATY +AE V+VYRYCRSL+I  PF TA ENL LLFE+++ +    P
Sbjct:    2 DPRRLYREIVEIEKQLRDLLRSNPLNVHDANLLRSRLTEKAQQLTDVSPAFAAAREIEQALWKPCFYKRXEDFRRRIRKYATASAS-DRS----VREHFARVSAEFQAFLTDAAAFYESLRASWTQWLVQHRVSRIASASXSSSSQLSDAEAAQQVERCRHSLHRCLVFLGDLARYRELHNQKARKNFAAAEQFYFRALSVLPENGNPHNQLAVLATYVEAETVAVYRYCRSLLIAQPFATAEENLALLFERSRQRPLAPP 257          
BLAST of mRNA_S-dermatodea_contig11192.771.1 vs. uniprot
Match: A0A8K1C7Y5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7Y5_PYTOL)

HSP 1 Score: 207 bits (526), Expect = 2.520e-57
Identity = 113/259 (43.63%), Postives = 166/259 (64.09%), Query Frame = 1
Query:   49 DVEKLFLQNQEREQALRNLLKTRPSESRDVQALRGEIRAAYSVILGMDPEFCASKDVELLLWKNCYYKRIEDFRKRLRKYSHLSGSTERSKAFEAREHLHGICLAFARFLGEAAEFYSSLLRRFEA--MQHQYS----NGGQAVGSSERRARLARLVVLSINRCFIFLGDLARYRELHGENSAKDWSGAERFYLHALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIENPFQTAHENLTLLFEKNKTKAFGVP 807
            D  +L+ +  + E+ LR LL++ P  ++D   LR  +     ++  + P F A++++E +LWK C+YKRIEDFR+R+RKY+  + ST+R+     REH   +   F  FL +A+ FY +L        +Q++ S    +G  +  +SE  A + +    S++RC +FLGDLARYRELHG+ + K+++ AE FY  ALAV+P +GNPHNQLAVLATY +AE V+VYRYCRSL+I  PF TA ENL LLFE+ + +    P
Sbjct:    2 DPRRLYREIVDVEKQLRELLRSNPLNAQDANVLRSRLMEKARILTQVSPTFAAARELEQVLWKPCFYKRIEDFRRRIRKYA-SAPSTDRT----VREHFARVSNEFQEFLTDASAFYENLRESLTRWLLQNRVSRIAASGPSSAAASEAGANIDKCRQ-SLHRCLVFLGDLARYRELHGQKAKKNFAAAENFYNKALAVIPENGNPHNQLAVLATYVEAETVAVYRYCRSLLIAQPFVTAEENLALLFERARQRPLAPP 254          
BLAST of mRNA_S-dermatodea_contig11192.771.1 vs. uniprot
Match: A0A6A4FXL6_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FXL6_9STRA)

HSP 1 Score: 205 bits (521), Expect = 1.160e-56
Identity = 112/254 (44.09%), Postives = 156/254 (61.42%), Query Frame = 1
Query:   49 DVEKLFLQNQEREQALRNLLKTRPSESRDVQALRGEIRAAYSVILGMDPEFCASKDVELLLWKNCYYKRIEDFRKRLRKYSHLSGSTERSKAFEAREHLHGICLAFARFLGEAAEFYSSLLRRFEA-MQHQYSNGGQAVGSSERRARLARLVVLSINRCFIFLGDLARYRELHGENSAKDWSGAERFYLHALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIENPFQTAHENLTLLFEKNKTKAFGVP 807
            D  + +++    ++ LR+LL+  P  ++D  ALR  +  A + +    P F A+K+VE  LWK C+Y+RIEDFR+R+RKY+  + +  +      REH   +   F +FL EAA FY+ L   F   +Q     GG A      R R       S++RC++FLGDLARYRELH + + K+++ AE  Y  ALAVLP +GNPHNQLAVLATY +AE V+VYRYCRSL+   PF TA ENL LLFE+++ +    P
Sbjct:    2 DPRRAYMELVALDKQLRDLLRANPLNAQDANALRRRLVDAATRLADAHPAFAAAKEVEQALWKPCFYRRIEDFRRRIRKYAAAAQADPK-----VREHFARVSSEFQQFLMEAAGFYAHLRDVFALWLQRNRLEGGVATEDGAARCRQ------SLHRCYVFLGDLARYRELHSQKAKKNFAAAEALYHRALAVLPENGNPHNQLAVLATYVEAETVAVYRYCRSLLTSQPFTTAEENLALLFERSRQRPLAAP 244          
BLAST of mRNA_S-dermatodea_contig11192.771.1 vs. uniprot
Match: H3GRP2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GRP2_PHYRM)

HSP 1 Score: 204 bits (519), Expect = 6.380e-56
Identity = 116/263 (44.11%), Postives = 161/263 (61.22%), Query Frame = 1
Query:   22 GASGVMAAQDVEKLFLQNQEREQALRNLLKTRPSESRDVQALRGEIRAAYSVILGMDPEFCASKDVELLLWKNCYYKRIEDFRKRLRKYSHLSGSTERSKAFEAREHLHGICLAFARFLGEAAEFYSSLLRRFEA-MQHQYSNGGQAVGSSERRARLARLVVLSINRCFIFLGDLARYRELHGENSAKDWSGAERFYLHALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIENPFQTAHENLTLLFEKNKTKAFGVP 807
            GA     A D    +++    ++ LR+LL+  P + +   ALR  +  A + ++   P F A+K+VE  LWK C+Y+RIEDFR+R+RKY+  +   +R+     REH   +   F +FL EAA FY+ L   F + +QH   NG  A      R R       S++RC++FLGDLARYRELH + + K+++ AE  Y  ALAVLP +GNPHNQLAVLATY +AE V+VYRYCRSL+   PF TA ENL LLFE+++ +    P
Sbjct:  330 GAPKANEAMDPRSTYMELAALDKQLRDLLRANPLDLQAANALRRRLTDAATRLVDAQPAFAAAKEVEQALWKPCFYRRIEDFRRRIRKYA-AAAQADRN----VREHFARVSSEFQQFLTEAAGFYAHLRDVFASWLQH---NGQGAKDEDVTRCRQ------SLHRCYVFLGDLARYRELHSQKTKKNFAAAEALYHRALAVLPENGNPHNQLAVLATYVEAETVAVYRYCRSLLTSQPFTTAEENLALLFERSRQRPLAAP 578          
BLAST of mRNA_S-dermatodea_contig11192.771.1 vs. uniprot
Match: A0A3M6VGA0_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VGA0_9STRA)

HSP 1 Score: 202 bits (515), Expect = 7.780e-56
Identity = 110/238 (46.22%), Postives = 147/238 (61.76%), Query Frame = 1
Query:   94 LRNLLKTRPSESRDVQALRGEIRAAYSVILGMDPEFCASKDVELLLWKNCYYKRIEDFRKRLRKYSHLSGSTERSKAFEAREHLHGICLAFARFLGEAAEFYSSLLRRFEAMQHQYSNGGQAVGSSERRARLARLVVLSINRCFIFLGDLARYRELHGENSAKDWSGAERFYLHALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIENPFQTAHENLTLLFEKNKTKAFGVP 807
            LR+LL+  P   +D   LR ++  A   ++    EF  SK+VEL LWK C+Y+RIEDFR+R+RKY+  +  T+R+     REH   +   F +FL EA+ FY+ L   F     Q         SS+    +AR    S++RC++FLGDLARYRELH +   K+++ AE  Y  ALAVLP +GNPHNQLAVLATY +AE V+VY YCRSL+   PF TA ENL LLFE+ + +    P
Sbjct:    8 LRDLLRANPLNVQDANVLRRQLMDAVIQMIDTHIEFAVSKEVELALWKPCFYRRIEDFRRRIRKYA-ATAQTDRN----VREHFARVSSEFQQFLTEASAFYTYLSNVFATWLQQNQPKAAIAESSDVATNVARCRQ-SLHRCYVFLGDLARYRELHSQKVKKNFAAAEALYHRALAVLPENGNPHNQLAVLATYVEAETVAVYHYCRSLLTSQPFTTAEENLALLFERTRQRPLAAP 239          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11192.771.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3L2_9PHAE8.290e-10957.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXG2_ECTSI3.300e-9966.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z7T1_9STRA3.630e-7453.31Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
K3X593_GLOUD9.110e-5945.08Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A3R7NMQ1_9STRA1.810e-5843.73Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
A0A2D4C910_PYTIN8.170e-5845.21Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A8K1C7Y5_PYTOL2.520e-5743.63Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A4FXL6_9STRA1.160e-5644.09Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
H3GRP2_PHYRM6.380e-5644.11Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A3M6VGA0_9STRA7.780e-5646.22Uncharacterized protein n=1 Tax=Peronospora effusa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11192contigS-dermatodea_contig11192:1055..5397 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score320.9
Seed ortholog evalue6.3e-85
Seed eggNOG ortholog2880.D7FXG2
EggNOG free text desc.telomerase RNA binding
EggNOG OGsKOG2162@1,KOG2162@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size867
Cds size864
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11192.771.1prot_S-dermatodea_contig11192.771.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11192 1055..5395 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924191.2221632-CDS-S-dermatodea_contig11192:1054..11891622924191.2221632-CDS-S-dermatodea_contig11192:1054..1189Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11192 1055..1189 +
1694079080.9270134-CDS-S-dermatodea_contig11192:1054..11891694079080.9270134-CDS-S-dermatodea_contig11192:1054..1189Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11192 1055..1189 +
1622924191.2334287-CDS-S-dermatodea_contig11192:2871..29971622924191.2334287-CDS-S-dermatodea_contig11192:2871..2997Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11192 2872..2997 +
1694079080.941451-CDS-S-dermatodea_contig11192:2871..29971694079080.941451-CDS-S-dermatodea_contig11192:2871..2997Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11192 2872..2997 +
1622924191.2435791-CDS-S-dermatodea_contig11192:3699..40531622924191.2435791-CDS-S-dermatodea_contig11192:3699..4053Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11192 3700..4053 +
1694079080.9596777-CDS-S-dermatodea_contig11192:3699..40531694079080.9596777-CDS-S-dermatodea_contig11192:3699..4053Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11192 3700..4053 +
1622924191.2516227-CDS-S-dermatodea_contig11192:5146..53951622924191.2516227-CDS-S-dermatodea_contig11192:5146..5395Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11192 5147..5395 +
1694079080.978052-CDS-S-dermatodea_contig11192:5146..53951694079080.978052-CDS-S-dermatodea_contig11192:5146..5395Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11192 5147..5395 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11192.771.1

>prot_S-dermatodea_contig11192.771.1 ID=prot_S-dermatodea_contig11192.771.1|Name=mRNA_S-dermatodea_contig11192.771.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=288bp
AWDLGGEGASGVMAAQDVEKLFLQNQEREQALRNLLKTRPSESRDVQALR
GEIRAAYSVILGMDPEFCASKDVELLLWKNCYYKRIEDFRKRLRKYSHLS
GSTERSKAFEAREHLHGICLAFARFLGEAAEFYSSLLRRFEAMQHQYSNG
GQAVGSSERRARLARLVVLSINRCFIFLGDLARYRELHGENSAKDWSGAE
RFYLHALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIENPFQTA
HENLTLLFEKNKTKAFGVPPGGSEGGKDGFAGSGRDLA
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mRNA from alignment at S-dermatodea_contig11192:1055..5397+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11192.771.1 ID=mRNA_S-dermatodea_contig11192.771.1|Name=mRNA_S-dermatodea_contig11192.771.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4343bp|location=Sequence derived from alignment at S-dermatodea_contig11192:1055..5397+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GCGTGGGACCTGGGAGGGGAGGGGGCAAGCGGAGTTATGGCTGCCCAGGA CGTAGAGAAGCTCTTCCTCCAGAACCAGGAGCGAGAGCAGGCTCTCCGGA ATCTGCTCAAGACTAGACCTTCCGAGTCCAGAGATGTGAGTAGACCCGGA GTGGGATTGAGGTGTGGCGGTCGGGTATGCATTGCCGCGGTGAAGCGTTG CGGAGGGCTGCAGTTGCGCAAATATGGTGCGGCGGGGGGGGGGGGGGGGG GGGGGGAGAGGTTGTCTCACTGAAAAAGGGGTTGGCGGGGGGGGGCGGAG AAAACACACCCCCGCCGGGNNNNNNNNNNGGGTGGTGGTGTGGGGGGGGG GGGGTGGGGGTGGGGGGGGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGTGTGGGGGGGCAGAGCTTGTCTCACTGCAGAGGAGGTTGGC GAGGGCGCTCGGAGCAACCATCCCCGCGCCGGGGTCGCCGGGATTGATTG CCGCCCCACTTTGCCTCTCGGAAGATCTTCGAATCACGCCGTGCCGTCGA CAGGACGTATCAAGCTGATAGTATTCATGTAGTGCGCGCAGTCATACGCA CCCTTCGGGTCTGTGCTGTCTCTATTTCTGAAGAATCGACCCCTCCCACC CCCCCTCCCCCTCCCCCCAGCTTTAGACCGTCCAGCACTAATTTGATGTA GTGTCACCTGTTGCTCTTGTTTTTCAACGGTGTTGAGCGGTGCCCGCCTA GACGAACGGTGTGTTGAGCGCTTGCACGCAACTGGTTGGTTGTCGTGGGG GTGGTGGCCAGGCGACTGCCAGCTGTCGGGTCCCGAAGGTTGCACTCCAA GAGGGCGCCCGTTCGCGTATAGTATATAATTGTATATTGTGCTGCGTCTT CTTTTTGTGTGTGCACTTTTGTTTTCTTCTTTCTATTTTCCTAGTTTGCA ATCACAGATCATTTCGTACAGTATGTACGAGTACTATCATATCGTAGTAT TTATACATACTCGTAGAAATGAACAGTTTTGTTTTGTTCCACGTATGAGA TGCTTCACATGCCGTATTGGTTTTTGCGGCTGTTGCGTGCGTATATGTAC GTTTATGTATGGCTTCATCAGTTATGTGTTGCATATACGTGGAGGTATGG ACCCATGGATGGTGCTGCTGTAGAGCTCCACGTAGTATAATAGCCGGCCG GTATGCACACAAGAGTACCGGTAGCTCTTCAGGAGTTTCGAAGGCGATGC CTGTTGACTGGGTAACTTCAATTTTGGTATGATAGCCTAGACCGTCGCTG TTTTTGTTCCCTGCGATGGCTAGGGATGCGAGATGCGAGTGAGGGCCCCA CGTGCTTGTTGTATCATGGGATTCGTTGGGGGCCGTTGATTGGTGCATCT TATTGCGTTTGTGCCGCCGAGATAAATGCGTTCCGCCTGCTCATATTAAC AGTATGATTTACCATATGATATTTTCTTCGTATTACAGCATCTCTACAAA GACAAGCACGTTACAAATGCATGGCCGTTACGTTGAAAACACCGCCTTCG CGCACTGAGATGGAAACCCTACAGAAGACAACCCCAGGCACAACCGGTCG AAGCCCGCCTCGATAGTGATCATCGATGAACGCAACCCGCCCCTTCCCAA AGGTTGCCCCGTTCTGTGGGGCATTGTGGTAAAATGTATGCACACAACTC AACTGCTGTCAGGTTGACGGGCGGCTTTTTTCTTTTTCTCGAAACCGGGC GCCGTAATATGCACATGCTTAGTATGCTTATCACATCAAACCATAACATA CCAAATATGCGCTTCAGGTCCAGGCGTTGCGAGGGGAGATCAGGGCGGCG TACAGCGTAATTCTGGGGATGGATCCTGAGTTCTGCGCCTCGAAAGACGT GGAGCTGCTCTTGTGGAAGAACTGCTACTATAAGCGGATAGAGGTTCGTG GAAGGGTTCGGGGTGGGGGGTTTTCAGTTCTCACAGACGCCGGCCTTGCG GTAAACTGTGTGTCCCATTTTCTATGTACAAAACGCATACTGGTACAATA ATATATAGACGGCCGCAATCGCGAAGTTTGGTCGGCCTTTCGTTGGACCT GTGACTCCGTCCCATCAGTAAACGAGCGACCCAGCCGTTGTTGCGTAGGT TTGGTGAGCTCGTTATTGTAGGCGAGCCTTCGAGGCGTGACAGCCGCAGT CCTCTAATCTGCGTGTAAAGAGGTCGGACGGTCGTGGTCGTGGCAACTTC TTCGTCCTCAGGCGTTGCGTGTGTGCATTATACAAATTTATCTAGCCCTT ATGATAGGCAAGGCCCGGCATGGTGTTGAGGATTTGAGGACCCAACTGTA GGCTTTTGTTGAAGCTCCATTGGTGGGCGCCGGCTGCGACCGACTTGCAC GCTTCTCCTACCCGTCGCCCAGTGCCTCCCCGCTACCCCCCCCCCCCACC CCCCCGAATCATTCCGGCCCCCTTGAGGCGGCGGCCCTTCATTGGCCTGT CAGCAGCAATTTGTCAGCAGGGCGCCCCTTGACGCCAAATCCAGAGCAAG CAAAACAGCTTAAAAAATATTAATAGGTATGATATGATAATGAGGACCAA AATTCACCCGACTTTATCATATACCTTGGGCCGCGCGAACCGCAGGATTT CCGCAAGCGTTTACGCAAGTATTCGCACTTGTCGGGGTCTACGGAGAGGT CGAAGGCGTTTGAAGCAAGGGAGCACCTGCACGGCATCTGTCTGGCCTTC GCCCGCTTCTTGGGCGAGGCCGCGGAGTTCTACTCGTCGCTGTTGAGGCG TTTCGAGGCGATGCAGCACCAGTACTCCAACGGAGGGCAGGCGGTCGGCA GCAGCGAGCGACGAGCGCGGCTGGCGAGACTCGTGGTCCTAAGCATCAAC CGGTGCTTTATTTTCCTGGGAGATCTCGCTCGGTACCGGGAGCTGCACGG GGAAAATTCCGCCAAGGATTGGTCCGGCGCCGAGCGGTTTTATCTGCATG TGAGCCCCGGGCAAGGTCAAGATGCGTTGTTGTGTGGCTTGGCGTGGCGG CGTGGCGTGTTCGAGCACGCGTTACGGCAGGTCCAAGGGCGCGCGGTATT TCGTCCTTTGCTCTCGTGTGGCATGTCTGTTGCATTTTTGCGAGCACCTG ACGTGAGGCCTGTTGTGGGGCGAGAGGTGAAAGATAGCTAGACGCGACGA TGTACCTGCTGGAGCAGTGTGACAAAACTACAAATGTTTTTGTTACACAT GCGTTCGGTAGTGATATTTCCAAAAACTTTACTCACGGAGAGGGTGCCGG CCGCGCGCAGGAAGCCGGCACATCGTTAGCAAGATATACTCGTCAGCAAG AATTTGCGGTCGTTTTTTTTCCTTCAATTTTTGCAGCTATTAATACAGTA ACACGCGAGAATACAAACGGACCTCTTTTTGCGATCAACTGCCAGTGTGC TCTGCATCTGGCCGCAGACTCCGTTCGCGGTCAAACTGTTTTCCAAGAAT ATCGTAAGACGATAGTAGAAGCAAGTATGTGTAGAATGTAGAGTACCTCT ATGCGAGAACGAGAACGAGAACGACGATGCAAGATGCTATGATAATTAAT AGTGCACCGTTGGTACCGTTGGTAGAGTACCTTGGTCCCCTCCTCCATTA CAGGCCACGCCCTCTTATGTTAACCTATCCTATCCATTTATCAGCAAGTT GTGGATGTAAAAGAACTAAAGTGAACTAAACGTGCGCTACACACAACAAC GTTTGTTGTTTTCATACAGAGGCCTATACTCACCATGGGTAACGATCGCC AGCTCGTGTATCAATATGCAGCTCCTCCCCCTCCGTGCCCGAATAAAGAA CGCAAGAGTTCCATCTCTTGCTTCTTGTTGCGGGATGTCGTTGGCAGAAT TCCCTCGCCGACCACAGCAGCAGTGCAGCACTACCCATCGTGGTTATTCT CGCACGGGCTGCTGTACATACCGTGACGTCATGACGTAATATGAAAACGT AATTATTGTGTGTCACAGGAAGCCTTACCGCCAACTCTCCTGACGTGTCA CCGGGCCGCCCCTCCCTCCGCCCCGCCCCCTCCCCGCCCCAGGCTTTGGC GGTGCTACCCACCAGCGGCAACCCCCACAACCAGTTGGCTGTCCTCGCCA CATACACGGACGCCGAATGCGTGTCGGTGTATCGCTACTGCCGCAGCCTC ATGATCGAGAACCCCTTTCAGACGGCGCACGAAAACCTGACGCTGCTGTT CGAGAAGAACAAAACGAAGGCCTTCGGGGTCCCGCCGGGAGGGTCGGAGG GAGGCAAGGACGGTTTCGCCGGGTCTGGAAGAGATTTGGCGGC
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Coding sequence (CDS) from alignment at S-dermatodea_contig11192:1055..5397+

>mRNA_S-dermatodea_contig11192.771.1 ID=mRNA_S-dermatodea_contig11192.771.1|Name=mRNA_S-dermatodea_contig11192.771.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1728bp|location=Sequence derived from alignment at S-dermatodea_contig11192:1055..5397+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GCGTGGGACCTGGGAGGGGAGGGGGCAAGCGGAGTTATGGCTGCCCAGGA
CGTAGAGAAGCTCTTCCTCCAGAACCAGGAGCGAGAGCAGGCTCTCCGGA
ATCTGCTCAAGACTAGACCTTCCGAGTCCAGAGATGCGTGGGACCTGGGA
GGGGAGGGGGCAAGCGGAGTTATGGCTGCCCAGGACGTAGAGAAGCTCTT
CCTCCAGAACCAGGAGCGAGAGCAGGCTCTCCGGAATCTGCTCAAGACTA
GACCTTCCGAGTCCAGAGATGTCCAGGCGTTGCGAGGGGAGATCAGGGCG
GCGTACAGCGTAATTCTGGGGATGGATCCTGAGTTCTGCGCCTCGAAAGA
CGTGGAGCTGCTCTTGTGGAAGAACTGCTACTATAAGCGGATAGAGGTCC
AGGCGTTGCGAGGGGAGATCAGGGCGGCGTACAGCGTAATTCTGGGGATG
GATCCTGAGTTCTGCGCCTCGAAAGACGTGGAGCTGCTCTTGTGGAAGAA
CTGCTACTATAAGCGGATAGAGGATTTCCGCAAGCGTTTACGCAAGTATT
CGCACTTGTCGGGGTCTACGGAGAGGTCGAAGGCGTTTGAAGCAAGGGAG
CACCTGCACGGCATCTGTCTGGCCTTCGCCCGCTTCTTGGGCGAGGCCGC
GGAGTTCTACTCGTCGCTGTTGAGGCGTTTCGAGGCGATGCAGCACCAGT
ACTCCAACGGAGGGCAGGCGGTCGGCAGCAGCGAGCGACGAGCGCGGCTG
GCGAGACTCGTGGTCCTAAGCATCAACCGGTGCTTTATTTTCCTGGGAGA
TCTCGCTCGGTACCGGGAGCTGCACGGGGAAAATTCCGCCAAGGATTGGT
CCGGCGCCGAGCGGTTTTATCTGCATGATTTCCGCAAGCGTTTACGCAAG
TATTCGCACTTGTCGGGGTCTACGGAGAGGTCGAAGGCGTTTGAAGCAAG
GGAGCACCTGCACGGCATCTGTCTGGCCTTCGCCCGCTTCTTGGGCGAGG
CCGCGGAGTTCTACTCGTCGCTGTTGAGGCGTTTCGAGGCGATGCAGCAC
CAGTACTCCAACGGAGGGCAGGCGGTCGGCAGCAGCGAGCGACGAGCGCG
GCTGGCGAGACTCGTGGTCCTAAGCATCAACCGGTGCTTTATTTTCCTGG
GAGATCTCGCTCGGTACCGGGAGCTGCACGGGGAAAATTCCGCCAAGGAT
TGGTCCGGCGCCGAGCGGTTTTATCTGCATGCTTTGGCGGTGCTACCCAC
CAGCGGCAACCCCCACAACCAGTTGGCTGTCCTCGCCACATACACGGACG
CCGAATGCGTGTCGGTGTATCGCTACTGCCGCAGCCTCATGATCGAGAAC
CCCTTTCAGACGGCGCACGAAAACCTGACGCTGCTGTTCGAGAAGAACAA
AACGAAGGCCTTCGGGGTCCCGCCGGGAGGGTCGGAGGGAGGCAAGGACG
GTTTCGCCGGGTCTGGAAGAGATTTGGCGGCTTTGGCGGTGCTACCCACC
AGCGGCAACCCCCACAACCAGTTGGCTGTCCTCGCCACATACACGGACGC
CGAATGCGTGTCGGTGTATCGCTACTGCCGCAGCCTCATGATCGAGAACC
CCTTTCAGACGGCGCACGAAAACCTGACGCTGCTGTTCGAGAAGAACAAA
ACGAAGGCCTTCGGGGTCCCGCCGGGAGGGTCGGAGGGAGGCAAGGACGG
TTTCGCCGGGTCTGGAAGAGATTTGGCG
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