mRNA_S-dermatodea_contig11190.770.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11190.770.1 vs. uniprot
Match: D7FMV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV8_ECTSI) HSP 1 Score: 188 bits (478), Expect = 3.300e-53 Identity = 88/113 (77.88%), Postives = 100/113 (88.50%), Query Frame = 1
Query: 1 QLMHCYWPLYESGGIFFHKLFRQMVVGAVAGQVTLIGYMSLRGGIKQWPFLLPLPFIVLYLSSRQVVWRAEGRRTSMSLSLDKAVLQDVQNEINVRDGAEPLWATFTPHAYMQ 339
QL+HCYWPLYESGG+FFHKLFRQ+VVGAVAGQVTLIGYMS+R G++QWPFLLPLP +VLY SSR WR GR+TS LSLDKAVLQDVQNEINVR+GA+P W +FTP AY+Q
Sbjct: 1727 QLLHCYWPLYESGGLFFHKLFRQLVVGAVAGQVTLIGYMSIRQGLRQWPFLLPLPLVVLYSSSR---WRDAGRQTSNMLSLDKAVLQDVQNEINVREGAKPAWESFTPTAYVQ 1836
BLAST of mRNA_S-dermatodea_contig11190.770.1 vs. uniprot
Match: A0A6H5KIL5_9PHAE (ERD protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIL5_9PHAE) HSP 1 Score: 187 bits (476), Expect = 6.110e-53 Identity = 88/113 (77.88%), Postives = 100/113 (88.50%), Query Frame = 1
Query: 1 QLMHCYWPLYESGGIFFHKLFRQMVVGAVAGQVTLIGYMSLRGGIKQWPFLLPLPFIVLYLSSRQVVWRAEGRRTSMSLSLDKAVLQDVQNEINVRDGAEPLWATFTPHAYMQ 339
QL+HCYWPLYESGG+FF KLFRQ+VVGAVAGQVTLIGYMS+R G++QWPFLLPLP +VLYLSSR WR GR+TS LSLDKAVLQDVQNEINVR+GA+P W +FTP AY+Q
Sbjct: 1483 QLLHCYWPLYESGGLFFQKLFRQLVVGAVAGQVTLIGYMSIRQGLRQWPFLLPLPLVVLYLSSR---WRDAGRQTSNMLSLDKAVLQDVQNEINVREGAKPAWESFTPTAYVQ 1592
BLAST of mRNA_S-dermatodea_contig11190.770.1 vs. uniprot
Match: A0A836CNV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNV2_9STRA) HSP 1 Score: 114 bits (286), Expect = 2.500e-27 Identity = 55/102 (53.92%), Postives = 74/102 (72.55%), Query Frame = 1
Query: 1 QLMHCYWPLYESGGIFFHKLFRQMVVGAVAGQV---------TLIGYMSLRGGIKQWPFLLPLPFIVLYLSSRQVVWRAEGRRTSMSLSLDKAVLQDVQNEI 279
QL+HCY+P+YESGG++F+KLFRQ+++G VAG V TLIGYMS++ G+KQ PFL+P+PFI++Y R W EG S LSLDKA LQD ++E+
Sbjct: 1259 QLVHCYYPIYESGGLYFYKLFRQVIIGVVAGSVXXXXXXXXVTLIGYMSIQRGLKQGPFLIPIPFIIVYWGLR---WTREGVAASNLLSLDKAALQDREDEL 1357
BLAST of mRNA_S-dermatodea_contig11190.770.1 vs. uniprot
Match: A0A7S1YZ12_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YZ12_TRICV) HSP 1 Score: 65.1 bits (157), Expect = 6.110e-10 Identity = 41/122 (33.61%), Postives = 62/122 (50.82%), Query Frame = 1
Query: 1 QLMHCYWPLYESGGIFFHKLFRQMVVGAVAGQVTLIGYMSLRGGIKQWPFLLPLPFIVLYLSSRQVVWRAEGRRTSMSLSLDKAVLQDVQNEINVRD---------GAEPLWATFTPHAYMQ 339
Q+++ Y P+YE GG F + ++G GQ+T IGY ++R G Q FL PLPFI +Y+ S ++ S LSL++AV D +++ GA+ +TF AY Q
Sbjct: 465 QVLYVYEPIYEGGGRLFPTACDRTLMGLFFGQLTFIGYSTIRQGHYQPLFLFPLPFITMYMMS---YFKKSYADPSTKLSLERAVDLDFLSDVRASSQDMPMVYGAGADEPSSTFCEDAYRQ 583
BLAST of mRNA_S-dermatodea_contig11190.770.1 vs. uniprot
Match: A0A6H5JKU1_9PHAE (ERD protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKU1_9PHAE) HSP 1 Score: 52.0 bits (123), Expect = 2.450e-5 Identity = 28/90 (31.11%), Postives = 49/90 (54.44%), Query Frame = 1
Query: 1 QLMHCYWPLYESGGIFFHKLFRQMVVGAVAGQVTLIGYMSLRGGIKQWPFLLPLPFIVLYLSSRQVVWRAEGRRTSMSLSLDKAVLQDVQ 270
Q++ Y P+YE+GG+FF K+FR+ + + Q T++G + L+ Q + L I+ Y++ + E S+ L + K VL DV+
Sbjct: 820 QMLFVYEPMYETGGVFFPKIFRRFIFALIIAQATMVGILILKVAYYQAGLVFVL-MILTYIAKSSLRGSYEPAALSLPLEIAK-VLDDVE 907
BLAST of mRNA_S-dermatodea_contig11190.770.1 vs. uniprot
Match: A0A7S2RX29_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RX29_9STRA) HSP 1 Score: 51.6 bits (122), Expect = 3.290e-5 Identity = 35/113 (30.97%), Postives = 52/113 (46.02%), Query Frame = 1
Query: 1 QLMHCYWPLYESGGIFFHKLFRQMVVGAVAGQVTLIGYMSLRGGIKQWPFLLPLPFIVLYLSSRQVVWRAEGRRTSMSLSLDKAVLQDVQNEINVRDGAEPLWATFTPHAYMQ 339
Q ++ Y P YE+GG F FR +VG VTL+GYM ++ G +Q+ L+PL V + + +V R + SLS + V RD F P ++Q
Sbjct: 591 QFVYVYVPSYETGGSLFPVFFRYTLVGLGFANVTLLGYMGMKEGWRQFACLVPL---VPLVEAFRVYCREAYMDAAQSLSREATVTMGATTPARDRD--------FDPDLFLQ 692
BLAST of mRNA_S-dermatodea_contig11190.770.1 vs. uniprot
Match: A0A7S1TR53_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TR53_9STRA) HSP 1 Score: 50.4 bits (119), Expect = 7.750e-5 Identity = 32/92 (34.78%), Postives = 54/92 (58.70%), Query Frame = 1
Query: 1 QLMHCYWPLYESGGIFFHKLFRQMVVGAVAGQVTLIGYMSLRGGIKQ--WPFLLPLPFIVLYLSSRQVVWRAEGR--RTSMSLSLDKAVLQD 264
Q + Y ESGG+FF +F +++VG +AGQ+TL GY+ ++ Q FLL +P+ V + +R + R R +++LSL++A + D
Sbjct: 187 QFLFVYINTTESGGVFFFPVFSRIIVGMIAGQLTLSGYLGIKLAYSQAGMVFLL-VPWTVAFY------YRMKNRYERPAVTLSLEQAAVVD 271
BLAST of mRNA_S-dermatodea_contig11190.770.1 vs. uniprot
Match: A0A7S1XLF6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLF6_9STRA) HSP 1 Score: 50.4 bits (119), Expect = 8.570e-5 Identity = 32/92 (34.78%), Postives = 54/92 (58.70%), Query Frame = 1
Query: 1 QLMHCYWPLYESGGIFFHKLFRQMVVGAVAGQVTLIGYMSLRGGIKQ--WPFLLPLPFIVLYLSSRQVVWRAEGR--RTSMSLSLDKAVLQD 264
Q + Y ESGG+FF +F +++VG +AGQ+TL GY+ ++ Q FLL +P+ V + +R + R R +++LSL++A + D
Sbjct: 927 QFLFVYINTTESGGVFFFPVFSRIIVGMIAGQLTLSGYLGIKLAYSQAGMVFLL-VPWTVAFY------YRMKNRYERPAVTLSLEQAAVVD 1011 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11190.770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11190.770.1 >prot_S-dermatodea_contig11190.770.1 ID=prot_S-dermatodea_contig11190.770.1|Name=mRNA_S-dermatodea_contig11190.770.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=111bp MHCYWPLYESGGIFFHKLFRQMVVGAVAGQVTLIGYMSLRGGIKQWPFLLback to top mRNA from alignment at S-dermatodea_contig11190:63..6283+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11190.770.1 ID=mRNA_S-dermatodea_contig11190.770.1|Name=mRNA_S-dermatodea_contig11190.770.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6221bp|location=Sequence derived from alignment at S-dermatodea_contig11190:63..6283+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11190:63..6283+ >mRNA_S-dermatodea_contig11190.770.1 ID=mRNA_S-dermatodea_contig11190.770.1|Name=mRNA_S-dermatodea_contig11190.770.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=666bp|location=Sequence derived from alignment at S-dermatodea_contig11190:63..6283+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |