mRNA_S-dermatodea_contig11185.763.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11185.763.1 vs. uniprot
Match: D8LD53_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD53_ECTSI) HSP 1 Score: 85.9 bits (211), Expect = 2.430e-18 Identity = 36/53 (67.92%), Postives = 43/53 (81.13%), Query Frame = 1
Query: 46 GSGQYADETNGDNWVQCDTCRKWRRLPDFVDPETLPAKWHCEMNEFDTARSSC 204
G+G +DE G WVQCDTC+KWRRLPDFVDP+ LP KWHCEMN +D AR++C
Sbjct: 57 GNGGPSDE--GVVWVQCDTCKKWRRLPDFVDPDQLPLKWHCEMNIYDAARANC 107
BLAST of mRNA_S-dermatodea_contig11185.763.1 vs. uniprot
Match: A0A6H5K0G2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0G2_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 4.720e-18 Identity = 36/53 (67.92%), Postives = 43/53 (81.13%), Query Frame = 1
Query: 46 GSGQYADETNGDNWVQCDTCRKWRRLPDFVDPETLPAKWHCEMNEFDTARSSC 204
G+G +DE G WVQCDTC+KWRRLPDFVDP+ LP KWHCEMN +D AR++C
Sbjct: 243 GNGGPSDE--GVVWVQCDTCKKWRRLPDFVDPDQLPLKWHCEMNIYDVARANC 293
BLAST of mRNA_S-dermatodea_contig11185.763.1 vs. uniprot
Match: A0A7S1XXG7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXG7_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 3.490e-12 Identity = 27/41 (65.85%), Postives = 30/41 (73.17%), Query Frame = 1
Query: 82 NWVQCDTCRKWRRLPDFVDPETLPAKWHCEMNEFDTARSSC 204
NWV+C+ C KWRRLP VDP TLP KW C MN +DT RS C
Sbjct: 227 NWVECEKCNKWRRLPAGVDPNTLPDKWFCSMNFWDTLRSHC 267
BLAST of mRNA_S-dermatodea_contig11185.763.1 vs. uniprot
Match: A0A2C6KIK7_9APIC (Cw-type zinc finger (Fragment) n=1 Tax=Cystoisospora suis TaxID=483139 RepID=A0A2C6KIK7_9APIC) HSP 1 Score: 67.4 bits (163), Expect = 1.730e-11 Identity = 26/42 (61.90%), Postives = 29/42 (69.05%), Query Frame = 1
Query: 79 DNWVQCDTCRKWRRLPDFVDPETLPAKWHCEMNEFDTARSSC 204
DNWVQC+ C+KWRRLP VDPE LP W C MN +D SC
Sbjct: 447 DNWVQCEACKKWRRLPASVDPEQLPDTWLCAMNHWDPLHDSC 488
BLAST of mRNA_S-dermatodea_contig11185.763.1 vs. uniprot
Match: A0A6P6RSI8_9EIME (histone-lysine N-methyltransferase 2D-like n=1 Tax=Cyclospora cayetanensis TaxID=88456 RepID=A0A6P6RSI8_9EIME) HSP 1 Score: 67.0 bits (162), Expect = 2.350e-11 Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 1
Query: 79 DNWVQCDTCRKWRRLPDFVDPETLPAKWHCEMNEFDTARSSC 204
DNWVQC+ CRKWRRLP +DP++LP W C M +D++ +SC
Sbjct: 504 DNWVQCEACRKWRRLPAAIDPDSLPETWVCSMTHWDSSITSC 545
BLAST of mRNA_S-dermatodea_contig11185.763.1 vs. uniprot
Match: A0A7S1GRD9_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GRD9_CYCTE) HSP 1 Score: 63.5 bits (153), Expect = 5.490e-11 Identity = 31/65 (47.69%), Postives = 43/65 (66.15%), Query Frame = 1
Query: 16 DEEEGREDEDGS--GQYADETNGDNWVQCDTCRKWRRLPDFVDPETLPAKWHCEMNEFDTARSSC 204
DE++G E ++GS GQ +N WV+CD C+KWRRL VD + LP+KW+C MN+ D R+ C
Sbjct: 73 DEQQGDERDEGSIFGQTTGSSNA-TWVECDKCKKWRRLRGVVDEKKLPSKWYCSMNKNDPDRARC 136
BLAST of mRNA_S-dermatodea_contig11185.763.1 vs. uniprot
Match: A0A7S3XPV4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPV4_HETAK) HSP 1 Score: 62.4 bits (150), Expect = 6.530e-11 Identity = 24/43 (55.81%), Postives = 30/43 (69.77%), Query Frame = 1
Query: 76 GDNWVQCDTCRKWRRLPDFVDPETLPAKWHCEMNEFDTARSSC 204
G WVQCD C KWRR+P+ VD E LP KW+C MN + R++C
Sbjct: 47 GFQWVQCDGCAKWRRVPNAVDLERLPEKWYCRMNTWAPERAAC 89
BLAST of mRNA_S-dermatodea_contig11185.763.1 vs. uniprot
Match: A0A7S2WT05_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WT05_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 8.090e-11 Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 1
Query: 82 NWVQCDTCRKWRRLPDFVDPETLPAKWHCEMNEFDTARSSC 204
NWV C+TC++WR+LP VD LP KW+C MNE+D R+SC
Sbjct: 413 NWVLCETCQQWRKLPPEVDVNRLPEKWYCHMNEWDKQRASC 453
BLAST of mRNA_S-dermatodea_contig11185.763.1 vs. uniprot
Match: A0A7S4AFB3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AFB3_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 8.180e-11 Identity = 25/46 (54.35%), Postives = 32/46 (69.57%), Query Frame = 1
Query: 67 ETNGDNWVQCDTCRKWRRLPDFVDPETLPAKWHCEMNEFDTARSSC 204
E N WVQCD+C+KWR LPD V +LP +W+C MN +D RS+C
Sbjct: 657 EQNDTEWVQCDSCKKWRVLPDTVKVSSLPEQWYCHMNIYDKKRSNC 702
BLAST of mRNA_S-dermatodea_contig11185.763.1 vs. uniprot
Match: A0A444UKL9_ACIRT (MORC family CW-type zinc finger protein 3 n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=A0A444UKL9_ACIRT) HSP 1 Score: 65.1 bits (157), Expect = 1.120e-10 Identity = 22/32 (68.75%), Postives = 28/32 (87.50%), Query Frame = 1
Query: 82 NWVQCDTCRKWRRLPDFVDPETLPAKWHCEMN 177
NWVQCD+C KWR+LPD +DP+ LP KW+C+MN
Sbjct: 400 NWVQCDSCLKWRKLPDGIDPDRLPEKWYCQMN 431 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11185.763.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11185.763.1 >prot_S-dermatodea_contig11185.763.1 ID=prot_S-dermatodea_contig11185.763.1|Name=mRNA_S-dermatodea_contig11185.763.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=68bp QLEDEDEEEGREDEDGSGQYADETNGDNWVQCDTCRKWRRLPDFVDPETLback to top mRNA from alignment at S-dermatodea_contig11185:6473..6676+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11185.763.1 ID=mRNA_S-dermatodea_contig11185.763.1|Name=mRNA_S-dermatodea_contig11185.763.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=204bp|location=Sequence derived from alignment at S-dermatodea_contig11185:6473..6676+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11185:6473..6676+ >mRNA_S-dermatodea_contig11185.763.1 ID=mRNA_S-dermatodea_contig11185.763.1|Name=mRNA_S-dermatodea_contig11185.763.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=408bp|location=Sequence derived from alignment at S-dermatodea_contig11185:6473..6676+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |