mRNA_S-dermatodea_contig11157.752.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11157.752.1
Unique NamemRNA_S-dermatodea_contig11157.752.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig11157.752.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE)

HSP 1 Score: 281 bits (720), Expect = 2.410e-84
Identity = 151/343 (44.02%), Postives = 224/343 (65.31%), Query Frame = 1 
Query:   28 RALETQYVRFLVKKMQPLNL-AEDEEFRSLL-DAAGSEAFPSLSAERSKHIIVEMYDATKRVLMQGLKEEVEASPLPILHFSLDISACKVSGKKYLGVHIFWVDRAFELRSAVVSVQPYNPATDYDSHLKAPEMLWRIFQATIDDFGLNAEDFASCT--SGSDVKAMCTNFA-SKSGILWDWCISHIASRACEDAFGTSADPAVVRNTEAQEVIRVVIEVVENLNKSSTWRAEFEDVQVCALGDCLKIVKHAPQRWLSLVETLERIIRLWHPLKQQYLAQNELFPLEQGETKANILQLYSLLQPVASITRDAQGATRAMNGAMHMAMARLKTTTLCATAPLQV 1041
            R  E Q  + +V+KM P +  +    F+ ++  A G+ ++P+L   R KH+I E+Y ATK+V++  + +EVE +PLPILH ++DI   K SG+K+LG+H+F+VD  FEL+ A++S++ Y P        +A ++L++I ++ +++FGL     AS T  SGSDVKA+ TN       +LW WC  H+  +A E A+G   DPA  +N +A+++++ V++VVENLNKS  ++A+FED+QV  LG+  K+VKHAPQRWLSL  T+ER IRLWH L++ Y  +   FPLE+G+TK  ILQLYSLLQP++SITRD Q     M   + M    L T  L  +  L+V
Sbjct:  179 RVKELQAAKLVVEKMLPFSFFSSGGTFKEMMATATGTSSYPTLPPRRVKHLITELYVATKKVVVGNMVQEVERAPLPILHHNIDIWTDKGSGRKFLGLHVFYVDANFELKDALLSIKRYAPDQGSLGDQRASDVLFQIMKSVLEEFGLKPSHLASGTTDSGSDVKAVSTNCLWPMYAVLWCWCFCHLMVKAAEQAYGIHLDPAKSKNPQARDILKKVVKVVENLNKSPNFKAKFEDLQVDMLGEIFKMVKHAPQRWLSLTRTVERTIRLWHVLRKLYSDEGRNFPLEEGDTKDAILQLYSLLQPLSSITRDGQYGDAPMMADIFMKFGMLNTDVLDPSKDLKV 521
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BLAST of mRNA_S-dermatodea_contig11157.752.1 vs. uniprot
Match: A0A6H5L1G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G0_9PHAE)

HSP 1 Score: 274 bits (700), Expect = 5.200e-82
Identity = 140/300 (46.67%), Postives = 201/300 (67.00%), Query Frame = 1 
Query:  154 AERSKHIIVEMYDATKRVLMQGLKEEVEASPLPILHFSLDISACKVSGKKYLGVHIFWVDRAFELRSAVVSVQPYNPATDYDSHLKAPEMLWRIFQATIDDFGLNAEDFASCT--SGSDVKAMCTNF--ASKSGILWDWCISHIASRACEDAFGTSADPAVVRNTEAQEVIRVVIEVVENLNKSSTWRAEFEDVQVCALGDCLKIVKHAPQRWLSLVETLERIIRLWHPLKQQYLAQNELFPLEQGETKANILQLYSLLQPVASITRDAQGATRAMNGAMHMAMARLKTTTLCATAPLQV 1041
            A  SKH++VEMY ATK+ ++  +  E+E +PLPI+H+ +D+  CK++G KY+ VH+ +V+   EL+  +++V+ Y P+    +  KA E+L+ +F + + +FG+   D A  T  SGSDVKAMC NF  A   G  WDWC+ H+A RA E AFGTSADP   +N +A+ V+++VI+    +N+S  ++ +F++ Q+   G+ LKI KHAPQRWLSLV  +ERIIRLWH L++ Y      FPL++G+ K NILQLYSLL+P+A+ITRD Q     M+  MHMA A LK   L  T PL+V
Sbjct:  206 ASASKHLLVEMYVATKKAVVGNMLTEIERAPLPIVHYGIDLWQCKITGLKYIDVHVCYVNSNLELQHELLAVKHYAPSAAVQATGKASEILFNVFNSVLREFGVKISDLAGGTTDSGSDVKAMCVNFLLAQHKG-SWDWCVCHLADRAAEQAFGTSADPQKPKNKDARGVVQLVIKAAAKVNQSPIFKQKFDEAQLQMTGEVLKIRKHAPQRWLSLVRVMERIIRLWHVLRKVYANDGVEFPLDKGDNKDNILQLYSLLRPLAAITRDGQYGAVPMSAEMHMAFAELKQEGLDPTGPLKV 504
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BLAST of mRNA_S-dermatodea_contig11157.752.1 vs. uniprot
Match: A0A6H5JYQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ2_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 3.570e-81
Identity = 132/266 (49.62%), Postives = 183/266 (68.80%), Query Frame = 1 
Query:  217 GLKEEVEASPLPILHFSLDISACKVSGKKYLGVHIFWVDRAFELRSAVVSVQPYNPATDYDSHLKAPEMLWRIFQATIDDFGLNAEDFASCT--SGSDVKAMCTNFA-SKSGILWDWCISHIASRACEDAFGTSADPAVVRNTEAQEVIRVVIEVVENLNKSSTWRAEFEDVQVCALGDCLKIVKHAPQRWLSLVETLERIIRLWHPLKQQYLAQNELFPLEQGETKANILQLYSLLQPVASITRDAQGATRAMNGAMHMAMARLK 1005
             ++EE+  +PLPI+H+ LD+  CKVSG+KYLGVH+F+VD  F LR A++SV+ Y P+T+     KA E+L+ IF+AT+ ++G+   D A  T  SGSDVKAMC N       I WDWC  H+A ++ E+ FGTSADP   +N  A++VI++VI+    +N+S+  + +FE V +  L + LKI KHAPQRWLSLV  +ERIIRLWH L++ Y    E FPL++G  + +ILQLYSLLQP+++ITRD Q     M   MH+A A+LK
Sbjct:  208 NMQEEINKAPLPIIHYGLDLWTCKVSGRKYLGVHVFYVDSNFSLRHALISVKHYAPSTEIQGTEKASEILFTIFRATLAEYGIKLSDLAGGTTDSGSDVKAMCVNILLGLHKIWWDWCDCHLADKSAENTFGTSADPQQSKNKIARDVIKLVIKTAAKINQSTIVKQKFEKVTLEMLDEILKITKHAPQRWLSLVLVMERIIRLWHVLRKVYANDGEEFPLDKGNNRDDILQLYSLLQPLSAITRDGQYGNAPMTAEMHLAFAQLK 473
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BLAST of mRNA_S-dermatodea_contig11157.752.1 vs. uniprot
Match: A0A6H5KS21_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS21_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 8.790e-79
Identity = 142/321 (44.24%), Postives = 205/321 (63.86%), Query Frame = 1 
Query:   58 LVKKMQPLNL-AEDEEFRSLLDA-AGSEAFPSLSAERSKHIIVEMYDATKRVLMQGLKEEVEASPLPILHFSLDISACKVSGKKYLGVHIFWVDRAFELRSAVVSVQPYNPATDYDSHLKAPEMLWRIFQATIDDFGLNAEDFASCT--SGSDVKAMCTN-FASKSGILWDWCISHIASRACEDAFGTSADPAVVRNTEAQEVIRVVIEVVENLNKSSTWRAEFEDVQVCALGDCLKIVKHAPQRWLSLVETLERIIRLWHPLKQQYLAQNELFPLEQGETKANILQLYSLLQPVASITRDAQGATRAMNGAMHMAMARLK 1005
            +V+KM P +  +  E FR ++    G+ ++P L  +R KH++VE+Y +TK+ ++  +  EV ++PLPILH  +DI   K SG+K+LGVH+F+V   FEL+ A++S              KA E+L +I ++ + +FGL A D AS T  SGSDVK++  N    K G+LW+WC  H+  +A EDAFGT  DP   +N E +++++ VI +V  L+KS    A+FEDVQV  LG+ LKI   APQRWL+LV TLER+IRLWH L++ +    + FPLE+G+ K  ILQLYSLLQP++S+TRD Q     M   ++M    LK
Sbjct:  115 VVEKMLPFHFYSSGEMFREMMATHGGNTSYPELPPKRVKHLLVELYCSTKKAVLGDMLVEVRSAPLPILHHMIDIWTDKPSGRKFLGVHLFYVTANFELKQALISA-------------KAAEVLLKILESVLHEFGLRASDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCCCHLMVKAAEDAFGTHPDPQKSKNPEGRKMLKNVIGMVGTLHKSPNLTAKFEDVQVDLLGEILKIPNQAPQRWLTLVRTLERVIRLWHVLRKLHSDAGKTFPLEEGDNKDCILQLYSLLQPLSSVTRDGQYGGVPMMADIYMKFGMLK 422
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BLAST of mRNA_S-dermatodea_contig11157.752.1 vs. uniprot
Match: A0A6H5L8D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D8_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 2.010e-66
Identity = 127/298 (42.62%), Postives = 177/298 (59.40%), Query Frame = 1 
Query:  121 AAGSEAFPSLSAERSKHIIVEMYDATKRVLMQGLKEEVEASPLPILHFSLDISACKVSGKKYLGVHIFWVDRAFELRSAVVSVQPYNPATDYDSHLKAPEMLWRIFQATIDDFGLNAEDFASCT--SGSDVKAMCTN-FASKSGILWDWCISHIASRACEDAFGTSADPAVVRNTEAQEVIRVVIEVVENLNKSSTWRAEFEDVQVCALGDCLKIVKHAPQRWLSLVETLERIIRLWHPLKQQYLAQNELFPLEQGETKANILQLYSLLQPVASITRDAQGATRAMNGAMHMAMARLK 1005
            AAG+  +P L AER K ++VEMY ATK+ +M  + EEV+ +PLPILH  +DI   K SG+K L     W                             P +L  I +A + +FGL   D AS T  SGSDVK++  N    + G+LW+WC  H+  +A ED FGT  DP   +N EA+++++ +I +V  L++SS ++A+F+D+QV  LG+ LKI   AP+RWL+LV TLER+IRLWH L++ Y    + FPLE+G+ K  ILQLYSLLQP +S+TRD Q     M   ++M    LK
Sbjct:    9 AAGNTPYPELPAERVKDLLVEMYIATKKAVMSNMLEEVKNAPLPILHHMIDIWTDKGSGRKTL-----W-------------------------ERPRPGVLLEIVKAILHEFGLRTSDLASGTADSGSDVKSVSFNGLHPQFGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKKLINLVGTLHRSSNFKAKFDDLQVDVLGEVLKIPNQAPKRWLTLVRTLERVIRLWHVLRKLYSDTGKTFPLEEGDNKDCILQLYSLLQPPSSVTRDGQYGGAPMLADIYMKCGMLK 276
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BLAST of mRNA_S-dermatodea_contig11157.752.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 5.390e-66
Identity = 126/275 (45.82%), Postives = 175/275 (63.64%), Query Frame = 1 
Query:  226 EEVEASPLPILHFSLDISACKVSGKKYLGVHIFWVDRAFELRSAVVSVQPYNPATDYDSHLKAPEMLWRIFQATIDDFGLNAEDFASCT--SGSDVKAMCTN-FASKSGILWDWCISHIASRACEDAFGTSADPAVVRNTEAQEVIRVVIEVVENLNKSSTWRAEFEDVQVCALGDCLKIVKHAPQRWLSLVETLERIIRLWHPLKQQYLAQNELFPLEQGETKANILQLYSLLQPVASITRDAQGATRAMNGAMHMAMARLKTTTLCATAPLQV 1041
            EEV  +PLPILH  +DI A K SG+K+LGVH+F+V   FEL+  ++S++ Y P+ D     KA E+L  I +A + +FG    D AS T  SGSDVK++  N    K G+LW+WC  H+  +A EDAFGT  DP   +N EA  +++ +I +V  L+KS    A+FED+QV  LG+ LKI   APQRWL+LV T+ER+IRLWH L++ Y    + F LE+G+ K  I QLYSLLQ ++S+TRD Q     M   +++    LK   L ++A L+V
Sbjct:    3 EEVRNAPLPILHHMIDIWADKPSGRKFLGVHVFYVTANFELKQTLLSIKRYRPSQDALGEAKAAEVLLEILEAILHEFGRRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMIKAAEDAFGTHPDPQKSKNPEAHNMLKNLIGIVGTLHKSLNLTAKFEDLQVDLLGEVLKIPNQAPQRWLTLVRTMERVIRLWHVLRKLYSDAGKNFILEEGDNKDCIPQLYSLLQSLSSVTRDGQYGGLPMLADIYIKFGMLKMGVLNSSADLKV 277
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BLAST of mRNA_S-dermatodea_contig11157.752.1 vs. uniprot
Match: A0A6H5JZ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ66_9PHAE)

HSP 1 Score: 218 bits (556), Expect = 1.170e-63
Identity = 124/275 (45.09%), Postives = 176/275 (64.00%), Query Frame = 1 
Query:  226 EEVEASPLPILHFSLDISACKVSGKKYLGVHIFWVDRAFELRSAVVSVQPYNPATDYDSHLKAPEMLWRIFQATIDDFGLNAEDFASCT--SGSDVKAMCTN-FASKSGILWDWCISHIASRACEDAFGTSADPAVVRNTEAQEVIRVVIEVVENLNKSSTWRAEFEDVQVCALGDCLKIVKHAPQRWLSLVETLERIIRLWHPLKQQYLAQNELFPLEQGETKANILQLYSLLQPVASITRDAQGATRAMNGAMHMAMARLKTTTLCATAPLQV 1041
            EEV  +PLPILH  +DI A K SG+K+LGVH+F+V   FEL+  ++S        D    +KA E+L  I +A +++FGL   D AS T  SGSDVK++  N    K G+LW+WC  H+  +A EDAFGT  DP + +N EA+ +++ +I ++  L+KS+   A+FED+QV  LG+ L I   APQRWL+LV T+ER+IRLW  +++ Y    + FPLE+G+ K  I QLYSLLQP++S+TRD Q     M   ++M    LK   L ++A L+V
Sbjct:    3 EEVRNAPLPILHHMIDIWADKPSGRKFLGVHVFYVTANFELKQTLLS--------DALGEVKAAEVLLEILEAILNEFGLRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKSNLT-AKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGLPMLADIYMKFGMLKMGVLNSSADLKV 268
[Close]
BLAST of mRNA_S-dermatodea_contig11157.752.1 vs. uniprot
Match: A0A6H5KZ81_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ81_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 6.770e-57
Identity = 123/325 (37.85%), Postives = 179/325 (55.08%), Query Frame = 1 
Query:   49 VRFLVKKMQPLNL-AEDEEFRSLLDAAGSEAFPSLSAERSKHIIVEMYDATKRVLMQGLKEEVEASPLPILHFSLDISACKVSGKKYLGVHIFWVDRAFELRSAV--VSVQPYNPATDYDSHLKAPEMLWRIFQATIDDFGLNAEDFASCT--SGSDVKAMCTN-FASKSGILWDWCISHIASRACEDAFGTSADPAVVRNTEAQEVIRVVIEVVENLNKSSTWRAEFEDVQVCALGDCLKIVKHAPQRWLSLVETLERIIRLWHPLKQQYLAQNELFPLEQGETKANILQLYSLLQPVASITRDAQGATRAMNGAMHMAMARLK 1005
            +R LV+K+ P++  +  +E R+LL   G   FP L   R KH++ E+Y ATK+V++  + EEV  +PLP+LH  +DI   K SG+K+LGVH+++V  +FE++ A+  V V+ Y+P     S  +A E+L  I ++ + + GL+  D AS T  SGSDVKA+  N      G+LW+WC  H+  +A E AFG   DP   +N  A++VI+VVI+VVENLNKSS  RA+FED+Q   LG+                                             + K ++LQLYSLL+P+  ITRD Q     M   ++M M  LK
Sbjct:   41 MRLLVEKLLPVSFFSSGDELRTLLALIGDSDFPPLRPRRVKHLLTELYVATKKVVVGNMLEEVRKAPLPVLHHMIDIWTEKGSGRKFLGVHLYYVTASFEMKHALLCVGVKRYSPDQGALSEARASEVLLEIVKSILVEVGLSPSDLASGTTDSGSDVKAVSVNGLHPHYGVLWNWCACHMMVKAAEQAFGVHPDPTKSKNPGARDVIKVVIKVVENLNKSSYLRAKFEDLQTELLGE--------------------------------------------DDNKNDVLQLYSLLEPLCMITRDGQYGGAPMMADIYMKMGILK 321
[Close]
BLAST of mRNA_S-dermatodea_contig11157.752.1 vs. uniprot
Match: A0A6H5KEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE6_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 4.360e-53
Identity = 103/228 (45.18%), Postives = 144/228 (63.16%), Query Frame = 1 
Query:  367 VQPYNPATDYDSHLKAPEMLWRIFQATIDDFGLNAEDFASCT--SGSDVKAMCTN-FASKSGILWDWCISHIASRACEDAFGTSADPAVVRNTEAQEVIRVVIEVVENLNKSSTWRAEFEDVQVCALGDCLKIVKHAPQRWLSLVETLERIIRLWHPLKQQYLAQNELFPLEQGETKANILQLYSLLQPVASITRDAQGATRAMNGAMHMAMARLKTTTLCATAPLQV 1041
            ++ Y+P+ D      A E+L  IF++ + +FGL   D AS T  SGSDVK+   N    + G+LW+WC  H+  +A ED FGT  DP   +N EA+++++ VI +V  LN+SS ++A+FED+QV  LGD LKI   APQRWL+ V TLER+IRLWH L++ Y    + FPLE+G+ K  ILQL+SLLQ ++S+TRD Q     M   + M    LK   L  + PL+V
Sbjct:   10 IKRYSPSQDALGEAAASEVLLEIFKSILREFGLRPSDLASGTTDSGSDVKSASVNGLYPQYGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKNVISMVGTLNRSSNFKAKFEDLQVDLLGDVLKIPNQAPQRWLTQVRTLERVIRLWHVLRKLYSDAGKNFPLEEGDNKNAILQLFSLLQSLSSVTRDGQYGNAPMQADVFMKFGELKMEVLDPSKPLKV 237
[Close]
BLAST of mRNA_S-dermatodea_contig11157.752.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 1.400e-46
Identity = 96/228 (42.11%), Postives = 137/228 (60.09%), Query Frame = 1 
Query:  367 VQPYNPATDYDSHLKAPEMLWRIFQATIDDFGLNAEDFASCT--SGSDVKAMCTNFA-SKSGILWDWCISHIASRACEDAFGTSADPAVVRNTEAQEVIRVVIEVVENLNKSSTWRAEFEDVQVCALGDCLKIVKHAPQRWLSLVETLERIIRLWHPLKQQYLAQNELFPLEQGETKANILQLYSLLQPVASITRDAQGATRAMNGAMHMAMARLKTTTLCATAPLQV 1041
            V+ Y P+    +  KA  +L+ +F++ + +FG+   D A  T  SGSD+KAMCTNF  ++  + WDWC+ H+A RA E AFGTSADP   +N +A++V+ ++I+    +N+S  ++ +F++ Q+  LG+ LKI +HAPQRWLSLV  +ERIIRLWH L++                      L+SLLQP+A ITRD Q     M   MHMA A LK   L    PL+V
Sbjct:   82 VKHYAPSAAVQASEKASGVLFTVFRSLLAEFGIKLSDLAGGTTDSGSDIKAMCTNFLLAQHNVYWDWCVCHLADRAAEAAFGTSADPQKSKNKDARQVVSLIIKAAAKVNQSPIFKQKFDEAQMEMLGETLKISRHAPQRWLSLVRVIERIIRLWHVLRK----------------------LFSLLQPLAVITRDGQYGAVPMTAEMHMAFAELKKELLDPDEPLKV 287
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11157.752.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJJ9_9PHAE2.410e-8444.02Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5L1G0_9PHAE5.200e-8246.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYQ2_9PHAE3.570e-8149.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KS21_9PHAE8.790e-7944.24Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L8D8_9PHAE2.010e-6642.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JB08_9PHAE5.390e-6645.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZ66_9PHAE1.170e-6345.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZ81_9PHAE6.770e-5737.85Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KEE6_9PHAE4.360e-5345.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZ46_9PHAE1.400e-4642.11Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11157contigS-dermatodea_contig11157:439..6088 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score111.3
Seed ortholog evalue9.1e-22
Seed eggNOG ortholog2880.D7G4Z8
EggNOG OGs2CZK4@1,2SARG@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size1041
Cds size1041
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11157.752.1prot_S-dermatodea_contig11157.752.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11157 439..6088 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924189.7226658-CDS-S-dermatodea_contig11157:438..7531622924189.7226658-CDS-S-dermatodea_contig11157:438..753Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11157 439..753 -
1694079079.8019803-CDS-S-dermatodea_contig11157:438..7531694079079.8019803-CDS-S-dermatodea_contig11157:438..753Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11157 439..753 -
1622924189.732261-CDS-S-dermatodea_contig11157:1331..16911622924189.732261-CDS-S-dermatodea_contig11157:1331..1691Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11157 1332..1691 -
1694079079.8158212-CDS-S-dermatodea_contig11157:1331..16911694079079.8158212-CDS-S-dermatodea_contig11157:1331..1691Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11157 1332..1691 -
1622924189.7427082-CDS-S-dermatodea_contig11157:2295..24571622924189.7427082-CDS-S-dermatodea_contig11157:2295..2457Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11157 2296..2457 -
1694079079.825335-CDS-S-dermatodea_contig11157:2295..24571694079079.825335-CDS-S-dermatodea_contig11157:2295..2457Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11157 2296..2457 -
1622924189.7624204-CDS-S-dermatodea_contig11157:5884..60881622924189.7624204-CDS-S-dermatodea_contig11157:5884..6088Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11157 5885..6088 -
1694079079.834763-CDS-S-dermatodea_contig11157:5884..60881694079079.834763-CDS-S-dermatodea_contig11157:5884..6088Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11157 5885..6088 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11157.752.1

>prot_S-dermatodea_contig11157.752.1 ID=prot_S-dermatodea_contig11157.752.1|Name=mRNA_S-dermatodea_contig11157.752.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=347bp
MNSRFFLLCRALETQYVRFLVKKMQPLNLAEDEEFRSLLDAAGSEAFPSL
SAERSKHIIVEMYDATKRVLMQGLKEEVEASPLPILHFSLDISACKVSGK
KYLGVHIFWVDRAFELRSAVVSVQPYNPATDYDSHLKAPEMLWRIFQATI
DDFGLNAEDFASCTSGSDVKAMCTNFASKSGILWDWCISHIASRACEDAF
GTSADPAVVRNTEAQEVIRVVIEVVENLNKSSTWRAEFEDVQVCALGDCL
KIVKHAPQRWLSLVETLERIIRLWHPLKQQYLAQNELFPLEQGETKANIL
QLYSLLQPVASITRDAQGATRAMNGAMHMAMARLKTTTLCATAPLQV
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mRNA from alignment at S-dermatodea_contig11157:439..6088-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11157.752.1 ID=mRNA_S-dermatodea_contig11157.752.1|Name=mRNA_S-dermatodea_contig11157.752.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5650bp|location=Sequence derived from alignment at S-dermatodea_contig11157:439..6088- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAATTCTCGTTTTTTTTTGCTTTGCAGGGCGCTGGAGACGCAGTACGT
CCGTTTTCTCGTGAAGAAAATGCAGCCGCTCAATCTGGCCGAAGACGAGG
AGTTTCGGAGCTTGTTGGATGCAGCAGGCAGTGAGGCCTTCCCCTCGCTC
AGCGCCGAGCGTTCGAAGCACATCATTGTCGAGATGTACGACGCTACAAA
GCGGGTGAGAGTTAGATCTTTAGAAGAGTGTCAAGGGTCCTGACTCTCTT
CGGAAACACGTTTTTTCCTGCGAAGCGCAAAACACCGAGCGCAGGACATT
ATTAAGGCAGTGGGCCACATACTCTAATAAGCCTATGGTTTCCTATTCTT
CAGGCGGTGCTTATGGTGGCCTATGGTTCGCACATTTTTGTTCCTGTTCG
ACTATTTAAAGAAGGTCGTGGAAACCCGTCGCGTACTCAAACTTGAACCC
AATTTCGCGAGAAAATTACAAGGATGTCTGCAATATGATTGGCCAAAAAC
ATCGCTGCGAACAGCAGAGGGGCTGGCGTAGCCTGCACCGCTGTGCGCTC
ACAAAGTTATGGCGGACAACGCTGAAAGGGCTACAAAGCGTGGGCGTCTG
GAGGCCGAGCCACCCTAGGACAACGCGGGTGACGCGAGTGCTACCTATAG
CGCCAGCACTGAAAGGAGCGACCCCCAGAAGTCGGGGGAAGAATGCACGA
AGGTGTAAGCTGAGGGCGCCGAGAGCGAGGATGCGGTTGCCTCGGACGGC
ATCGGCGACATCCACCATATGCTAGGGGATGCACCTCCGCTGGCAGCGGA
GCCAATACCTGCGGCGGTGGAGCTGCACAGGATGGCATGTGGAGAACGCG
GAGGGCGTGCGGGCTTGGCTCCGAGCTCGCTCGACAGAGAGTGCACATTG
CTCCTGCGAACTGCCTCGCCCCGATTTGGAGCAGGGCAAATCCGAAGGTG
CCTCAACCTGCGGCGTCGAGCATGCCGACTTCGTCGCCGACGTCGCCGAC
ATCGGCATGGAGGTCAGTAAGGATTCCTTTCGAAGGGTCTCTCTTTAGTA
GCTCTGTTACAGTCTCCGAGACCACGTGCGTGCTACTTTGGAGCGGTTTG
GTGGGAGGAGGGGTTCAAAGCAGAAAAAAGAATAATACAACGTATTAATA
GGAGGTAGAAGTACAAGAGTTATTTGGGGCGACTGCTGCGAAGGAGGAAA
AATTATCATTAGAGGTACTGCTGCATACATTTGTCACACTATTTGGGGGG
CTGCTGCAAAGCAGAAAATAAAATAGTAGTAGGCATACATTTGTCAAGTA
ATTAGAGTAGCTGTTGCTTGTATGTACAAGCTTGACTCTGTGATCAAGTA
AGTTTGGGCCCGACTGCTGTACGCACCCCAGGCAAGTATAATACTTCGTA
TGCACGTTCTGGTTGTGTACTTGTACTTGAATGTGGGTCATATATATACT
CGTAGATGTACATGCACATGGATCGGCATCATACTGTTGATGTAATACAG
CTATTAATAAGCTGCTGCAGTGCTTCCACCACTGCTGTAAGAAGGGATGT
ATCACAGATCTACATAACTCAGCTCCGTAGATTCTTACATGCACTGCAGT
ACAGCATACAAAAATAAGTATATATGGCTATATAGCTCTACAGCTGTACA
TTTATTTTATGCGGCAAATATTTAGCTCTACACACATAAAGCATGCATGT
ATCGTGCAACTGATGTATCGTACATATAAATTAGTTCTGTACTACTGCTG
TATTTACGAAATTATCCAGACAGGCTGAGCCGTTTCCCGTCGAGACTATA
GGACATCATACACCTATCGGCTAATTGTTTTAGAGGTAGCTTGTTGTTGT
TTCTTGTAAATATTTTAATCGTGTGTAATGTTCCGAGTAAAGAATACTTG
TATGTACACTGGGCGCCTGACTTCCAGGGAAAGCAAGAGCACCTTGATTT
TCCTCTTTTCTTGCCGTCTGCACCTGTGTGTTTGTAAAAGACATGCCAAT
CACCGATCAGAGCGGCCGATGGCTCCCGTGCCTTAGCCGGCCACCATATT
TCGTCATACGACATTTACGCACTATTGATAGTACCTGGTACATGACAACT
GCATGGACACGGCACCAACGACGCTTGTGCTTCCCATGCCCCTGCAGAAA
ATACTGGAGCGCCAGCAGATGAGGGTCGGCTCGGACAACGTTTCGTACGT
CCTCGCCAGGGCCGTGCGCCGCTCGTGCATCCAGCGCCGCGAAGGCGGTC
GGCTCTACAGGGATGGACAGTCACAGTGCCCCAGGGGTGCGTGCGTGCAT
GGCGCGGCCCATGGACATGTTTGCCGGGAAGGGCATGGAGGGGATTCCAC
GAGAGGTGGTCTGGGCCCTCCGTCACATCTGAGTGTGTGGCTCTCTGGCG
ACAGTCGCTACGGGATGTGATGTGATGTGATGTGATGTGATGTGATGGTT
GATGTACCACAAAATGGTGGTCTAATTTATGGTGTTGTTCTGTTTGGCAA
TGTACTGCTGGTACTGCTGGTATTTAGCATTTGGCCTGTTGCCGCGGGTC
GTTGCGCTCGAAGCTGTGCGCAGACCGATAATATAAGGGGCGTCAGCTCG
TCCCGCCGCTTCTTGGTTTGGTGGCAGACGAAAGCGTCCACGGTCCGGTG
CGTACAGCGAGCGGCGTTATGTGGGGCTGGTGGTTGGGGGGGGGGGGGGG
GGGGGGTTGTATTCGGTGTAATTTTCGTGAGCTCATATTTAGGAGCGCAA
GTCCTTTTTTGGCCATGTGCCAGAAGTAGACGTACGGTGGCGTTGCGGCT
GGGGAACGCGCGGGCAAGGGTGAAGTTCCCAAAACTAAGGAATCCGTAGT
TGTGATATATTTTTTGTTTGCTCTCGTTCTCGTGAGTGTTATATTTTGGA
GCAAGTTCGTGTTTTTTTGCTATGTGCCAGAAGCAGACGGGGCGTTGCGG
CTGGAGAACGCGGACAAGAGCGCAGTTCCCAAAAGTAATATATCGTGTGT
GTGAGGAGCCCCTGGTGTAAAGAGACTCGGGAATCGCCGCCCTCAGCCTC
CGCGAACGACTGCCGCGCGCACCTCTCAGTGTCCATCTCATTGGTGCAGA
AGTGACAGCCTAGGCTGGTCTAGCGGCGTTTTTTGCGAAAAACAAATGTA
ACCGTATTTGGGGTCCGCCGAAAAGCGGGGACGCGGGGATGACAAGTGTG
GCCCACACTGCCTTGATCGTATTTTACGCATGCGGGTTTGGTTTGGTTTG
GTGTGCGGTGTGCCACCCAAGAGTATTAATAATATTTAAATGGTGTGTAT
ATGTGTGTATTTTTGTAACCGCCGTCATTTATCGGAAAACCACGGCTTCG
CTTGCACCCGACGGCTGAGGGAGCGAGTTGTGTCCCGTGATTATCATGCA
AAACACGGGGCGCAACAATAAGACGTGAAGATACATACTTACGGACGCCG
TTTAAGCAGCTTCAAGTGATCGAGATGTACGAAGCTTAGGCAGTCACATG
CATTCCTACACGTTTTTCTTCTTGTGTTGTTTTTGCTGTCGACTGCTGCA
TCTGTCGAAAACAAACCCGATTTCTTCTCTTGATCTAACCGAGGCCTCGG
CCGTTGCATGCGCGTTGGCAAATGTCAACAGGTGCTCATGCAGGGACTGA
AGGAGGAAGTCGAGGCAAGTCCTCTGCCGATCCTACACTTCAGCTTGGAC
ATCTCGGCGTGCAAGGTGTCGGGCAAGAAGTACCTGGGGGTCCACATCTT
CTGGGTTGACCGCGCATTTGAGTTGCGCAGCGCCGTCGTCTCGGTACGAG
TATGTTGCGATGCGCCGACTTTCTAAGTTTTTGTTTTGCTCCCGCCGTAC
ATACGTGTGCTCCTAATCTAGGAGGGAGGCGAAAGGCTCACACCTCATCT
AGAGTAGTAAGAGTGGTCGCATCATGTTTGTATGTGATGCACGCTATCTG
ATAGAAAAGAGTGCCGATGTTCATCGCACAGTGTCGGGGTGACCCCCTGG
GCTCGGGCTCGCTAGGGCTAGTCTCGGGAGGGTTCACCCCTCGTGGGTAT
GGGCCGAACGCGACGTTCAGCCAAGGTCGACGGATATTGTGGGGGACAGG
GGGCGACACGTGACCGTGAGGTTGGGCCTCAGCCCTGGACGCAGGCCAAC
TTATCTCCAAAGTTCGTGACGTGTCATAGTTCAGAGACATGACATGTCAT
AGACTAGTCTGACGTCTTGTCGGTCTTTAGTGACCTTAGGCGTCATAGTC
TAGTGCCGTGTCACTCACAACAGTCAGCGATTGGTCTTAGTTTTTCAACT
CAGTAACGGCAACGACGCAGGTGTCGTTGTGAAAAGTGTAACGCGGTGAC
TCCCCTTGTGTAAAACGCCTCCTCCCTCGTTGTGTTTCTTACCCTAGGTT
CAGCCTTACAACCCTGCAACGGACTATGATTCCCATTTGAAGGCACCGGA
GATGCTCTGGAGGATTTTCCAGGCAACGATCGACGATTTCGGCCTGAACG
CCGAGGACTTCGCGTCCTGCACTAGCGGGTCGGACGTCAAGGCAATGTGC
ACGAACTTCGCGAGCAAGTCGGGGATCCTGTGGGACTGGTGCATCTCTCA
CATAGCCAGTAGGGCTTGTGAAGACGCGTTCGGCACCTCAGCCGACCCTG
CGGTTGTCAGAAACACCGAGGCGCAAGAGGTCATTCGAGTCGTGATCGAG
GTAGTCGAGAACCTCAACAAGTCCTCGACATGGCGTGCAGAGTTCGAAGA
CGTCCAGGTAGACAGAGGGGCCCGCGAGCACACGACCGACATTTACCAAT
CGTCCCATTTCTTGATTGCTGCCTTGCTACCACAAACATCTGCATTATGG
TGCAACCGTTAAGCCAATCGCGCTGTATCCCCCCCCCCGAGCCAGACGAA
GGCGGTAGCTATATTCGGAGATAAGAAGTGGCCTCAGAAGGCGAGAAGTG
ATGTAGACAGGATAAGAAAAACAATTTTTGCGCCACCTTTGGTAGAGTGA
GAAGGAACGATTTGCAATCGGCGATCGATCCTGTGGGAACAGTGCTCCGT
CCTCTCGAGCACGCGTAATGTCTAACAACGAAGTCATTCAAAACATAGGT
ACCCCCCCCCCCCCCCCCTAAAACAATTAAGATTTCAGAAACGTAGAGCC
CCCCTTAGAAAAAAACATTTCAAAAACATAGAGCGAGCGTTGGGGTTGCA
GCGTTTCAAGAGGGAAGATGGTCCAAGCTACACCCCATGGAGATTCACTT
GTTACAGATGGTGCTATGGTGTCATATCATGTATGATGTTATATTGTACC
CCCTCCCCCACCCCGTCTCGCCCTTTGCCCCACAGGTTTGCGCTTTGGGA
GACTGTCTGAAGATCGTCAAGCACGCACCGCAGCGCTGGCTCAGTCTGGT
AGAGACCCTCGAACGCATTATCCGCCTGTGGCACCCTCTCAAGCAGCAGT
ACTTGGCCCAGAACGAGCTTTTCCCTTTGGAGCAGGGCGAGACTAAGGCC
AACATCCTCCAGCTGTACTCCCTACTGCAGCCCGTGGCGAGCATCACAAG
AGATGCGCAAGGCGCCACGAGGGCGATGAATGGCGCGATGCACATGGCGA
TGGCAAGGCTAAAGACGACGACGCTCTGCGCGACGGCTCCGTTGCAGGTG
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Coding sequence (CDS) from alignment at S-dermatodea_contig11157:439..6088-

>mRNA_S-dermatodea_contig11157.752.1 ID=mRNA_S-dermatodea_contig11157.752.1|Name=mRNA_S-dermatodea_contig11157.752.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2082bp|location=Sequence derived from alignment at S-dermatodea_contig11157:439..6088- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAATTCTCGTTTTTTTTTGCTTTGCAGGGCGCTGGAGACGCAGTACGT
CCGTTTTCTCGTGAAGAAAATGCAGCCGCTCAATCTGGCCGAAGACGAGG
AGTTTCGGAGCTTGTTGGATGCAGCAGGCAGTGAGGCCTTCCCCTCGCTC
AGCGCCGAGCGTTCGAAGCACATCATTGTCGAGATGTACGACGCTACAAA
GCGGATGAATTCTCGTTTTTTTTTGCTTTGCAGGGCGCTGGAGACGCAGT
ACGTCCGTTTTCTCGTGAAGAAAATGCAGCCGCTCAATCTGGCCGAAGAC
GAGGAGTTTCGGAGCTTGTTGGATGCAGCAGGCAGTGAGGCCTTCCCCTC
GCTCAGCGCCGAGCGTTCGAAGCACATCATTGTCGAGATGTACGACGCTA
CAAAGCGGGTGCTCATGCAGGGACTGAAGGAGGAAGTCGAGGCAAGTCCT
CTGCCGATCCTACACTTCAGCTTGGACATCTCGGCGTGCAAGGTGTCGGG
CAAGAAGTACCTGGGGGTCCACATCTTCTGGGTTGACCGCGCATTTGAGT
TGCGCAGCGCCGTCGTCTCGGTGCTCATGCAGGGACTGAAGGAGGAAGTC
GAGGCAAGTCCTCTGCCGATCCTACACTTCAGCTTGGACATCTCGGCGTG
CAAGGTGTCGGGCAAGAAGTACCTGGGGGTCCACATCTTCTGGGTTGACC
GCGCATTTGAGTTGCGCAGCGCCGTCGTCTCGGTTCAGCCTTACAACCCT
GCAACGGACTATGATTCCCATTTGAAGGCACCGGAGATGCTCTGGAGGAT
TTTCCAGGCAACGATCGACGATTTCGGCCTGAACGCCGAGGACTTCGCGT
CCTGCACTAGCGGGTCGGACGTCAAGGCAATGTGCACGAACTTCGCGAGC
AAGTCGGGGATCCTGTGGGACTGGTGCATCTCTCACATAGCCAGTAGGGC
TTGTGAAGACGCGTTCGGCACCTCAGCCGACCCTGCGGTTGTCAGAAACA
CCGAGGCGCAAGAGGTCATTCGAGTCGTGATCGAGGTAGTCGAGAACCTC
AACAAGTCCTCGACATGGCGTGCAGAGTTCGAAGACGTCCAGGTTCAGCC
TTACAACCCTGCAACGGACTATGATTCCCATTTGAAGGCACCGGAGATGC
TCTGGAGGATTTTCCAGGCAACGATCGACGATTTCGGCCTGAACGCCGAG
GACTTCGCGTCCTGCACTAGCGGGTCGGACGTCAAGGCAATGTGCACGAA
CTTCGCGAGCAAGTCGGGGATCCTGTGGGACTGGTGCATCTCTCACATAG
CCAGTAGGGCTTGTGAAGACGCGTTCGGCACCTCAGCCGACCCTGCGGTT
GTCAGAAACACCGAGGCGCAAGAGGTCATTCGAGTCGTGATCGAGGTAGT
CGAGAACCTCAACAAGTCCTCGACATGGCGTGCAGAGTTCGAAGACGTCC
AGGTTTGCGCTTTGGGAGACTGTCTGAAGATCGTCAAGCACGCACCGCAG
CGCTGGCTCAGTCTGGTAGAGACCCTCGAACGCATTATCCGCCTGTGGCA
CCCTCTCAAGCAGCAGTACTTGGCCCAGAACGAGCTTTTCCCTTTGGAGC
AGGGCGAGACTAAGGCCAACATCCTCCAGCTGTACTCCCTACTGCAGCCC
GTGGCGAGCATCACAAGAGATGCGCAAGGCGCCACGAGGGCGATGAATGG
CGCGATGCACATGGCGATGGCAAGGCTAAAGACGACGACGCTCTGCGCGA
CGGCTCCGTTGCAGGTGGTTTGCGCTTTGGGAGACTGTCTGAAGATCGTC
AAGCACGCACCGCAGCGCTGGCTCAGTCTGGTAGAGACCCTCGAACGCAT
TATCCGCCTGTGGCACCCTCTCAAGCAGCAGTACTTGGCCCAGAACGAGC
TTTTCCCTTTGGAGCAGGGCGAGACTAAGGCCAACATCCTCCAGCTGTAC
TCCCTACTGCAGCCCGTGGCGAGCATCACAAGAGATGCGCAAGGCGCCAC
GAGGGCGATGAATGGCGCGATGCACATGGCGATGGCAAGGCTAAAGACGA
CGACGCTCTGCGCGACGGCTCCGTTGCAGGTG
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