mRNA_S-dermatodea_contig11155.751.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11155.751.1 vs. uniprot
Match: D8LKW8_ECTSI (CCHC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW8_ECTSI) HSP 1 Score: 298 bits (763), Expect = 2.020e-88 Identity = 255/376 (67.82%), Postives = 274/376 (72.87%), Query Frame = 3
Query: 543 PQHERLLASGGYDGKLMYWVVGSEKPYAEIEYAHEGTAVWDLGWHPVGHVLASGGNDHTVKFWVRNRVGDTMGCKPELNEDGTPAEVDPNESLNMRPEGFAIN-AITAAAVAAXXXXXXXXXXXXXXXXXXXXAKLPGLGKPLAIPLSTRPLGNRFAQAVAKMGGPEPGAGDADESARGGGGKXXXXXDRGGXXXXXXXXXXG--------------GGRDRXXXXXXXXXXXXXXXXXXXXXXXXXXXRXXXXXRGAGWESAGRRPASRPTKGYVCDRCGSTDHFLLDCPMKNVPRXXXXXXXXXXXXXXXXXXXFPQGMNALAG---VQKHSGGGGTGHYGPGSAGG----RPDMPYGAPAGDLQGQGIGMAAP 1604
PQHERLLASGGYDGK+MYWVVGSEKP+AEIEYAH+GTAVWDLGWHPVGHVLASG NDHTVKFWVRNRVGDTMGCKPELNEDGT AEVDP+++ RPEGF + A TAA A XXXXXXXXXXXXX KLPGLGKPLA+PLS PLGNRFAQ + ++GGPE GAGD D S+RG GG+ X XXXXXXXXXX GGR XXXXXXXXXXXXXXXXX XXXXXX XXXXX RP SRP K YVC RCG DH+ LDCP+KNVP+XXXXXXXXXXXXXXXXXXXF G+NA G GHYGP +AG RPD+PYGAP GDLQG IGM AP
Sbjct: 302 PQHERLLASGGYDGKMMYWVVGSEKPHAEIEYAHDGTAVWDLGWHPVGHVLASGSNDHTVKFWVRNRVGDTMGCKPELNEDGTAAEVDPDDTT--RPEGFTPSPAATAAFAALDAAXXXXXXXXXXXXXPEIPTKLPGLGKPLAVPLSKLPLGNRFAQTIVRLGGPELGAGDPDSSSRGKGGRGKDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGGEXXXXXXXXXXXXXXXXXRESXXXXXXXXXXXXXXXXXXXX-XRPTSRPAKSYVCKRCGGNDHWWLDCPLKNVPKXXXXXXXXXXXXXXXXXXXF-LGLNAPPGGGXXXXXXXXXXXGHYGP-AAGAPPPPRPDLPYGAPPGDLQG--IGMMAP 670
BLAST of mRNA_S-dermatodea_contig11155.751.1 vs. uniprot
Match: A0A6H5JUK6_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK6_9PHAE) HSP 1 Score: 273 bits (698), Expect = 3.040e-79 Identity = 212/225 (94.22%), Postives = 218/225 (96.89%), Query Frame = 3
Query: 102 MTEVLHFLAHGANPIRGLSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPQHERLLASGGYDGKLMYWVVGSEKPYAEIEYAHEGTAVWDLGWHPVGHVLASGGNDHTVKFWVRNRVGDTMGCKPEL 776
MT V HF+AHGANPIRGLSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PQHERLLASGGYDGK+MYWV+GSEKP+AEIEYAH+GTAVWDLGWHPVGHVLASG NDHTVKFWVRNRVGDTMGCKPE+
Sbjct: 1 MTAVQHFIAHGANPIRGLSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWHPYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQHERLLASGGYDGKMMYWVIGSEKPHAEIEYAHDGTAVWDLGWHPVGHVLASGSNDHTVKFWVRNRVGDTMGCKPEV 225
BLAST of mRNA_S-dermatodea_contig11155.751.1 vs. uniprot
Match: A0A152A6F6_9MYCE (WD40 repeat-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A6F6_9MYCE) HSP 1 Score: 208 bits (530), Expect = 1.500e-57 Identity = 182/290 (62.76%), Postives = 216/290 (74.48%), Query Frame = 3
Query: 3 AHTSAVRSMAWSHSGNTLISGDHNGIIKYWQPSMTEVLHFLAHGANPIRGLSFGPTDSKFASCSDDST---VRIWDWEYYKEERALTGHGWDVKTVEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPQHERLLASGGYDGKLMYWVVGSEKPYAEIEYAHEGTAVWDLGWHPVGHVLASGGNDHTVKFWVRNRVGDTMGCKPELNEDGTPAEVDPNESL--NMRPEGFAINAI 857
AH + +RS+ WSH+ + ++SGD G+IKYWQP+M V F AHGA+ IR +SF PTD KFASCSD ST ++IWD+ YKEE +L GHGWDVK V WH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHP HE L SGG+DG ++YWVVG + P +I AHE ++VW L WHP+GH+LASG NDHT KFW RNR GDTM + + N A+++ + + N+ P+ F + I
Sbjct: 169 AHDTPIRSIVWSHNEDWMVSGDKGGLIKYWQPNMNNVKMFQAHGAS-IRDISFSPTDLKFASCSDTSTDASLKIWDFARYKEETSLKGHGWDVKCVAWHPQKALLVSGSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPFHEELFVSGGFDGSILYWVVGHDDPQGKIYSAHE-SSVWALSWHPIGHILASGSNDHTTKFWCRNRPGDTM--RDKYNNPNASADIETEDDVMANLPPQEFNLPGI 454
BLAST of mRNA_S-dermatodea_contig11155.751.1 vs. uniprot
Match: L8GUA6_ACACA (WD domain, G-beta repeat-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GUA6_ACACA) HSP 1 Score: 195 bits (495), Expect = 4.140e-51 Identity = 173/262 (66.03%), Postives = 204/262 (77.86%), Query Frame = 3
Query: 3 AHTSAVRSMAWSHSGNTLISGDHNGIIKYWQPSMTEVLHFLAHGANPIRGLSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPQHERLLASGGYDGKLMYWVVGSEKPYAEIEYAHEGTAVWDLGWHPVGHVLASGGNDHTVKFWVRNRVGDTMGCK-PELNED 785
AH +A+RSM WSH+ +++GDH GI+KYWQ +M V F AH +R ++F P+D KFA+CSDD +++IWD+ Y EE LTGHGWDVK ++WH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHP HE SGGYDG +++W VG + P I+ AHEG+ +WD+ WHP+GH+L SG NDHT KFW RNR GD M K E+ E+
Sbjct: 89 AHDTAIRSMVWSHNDQWMVTGDHEGIVKYWQSNMNNVKAFSAH-KEAVRDITFAPSDMKFATCSDDVSIKIWDFTRYTEEITLTGHGWDVKCLDWHPVTSLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPVHEDSFTSGGYDGSILFWRVGLDAPQGIIQNAHEGS-IWDMAWHPLGHILCSGSNDHTTKFWCRNRPGDPMTDKYNEIKEE 348
BLAST of mRNA_S-dermatodea_contig11155.751.1 vs. uniprot
Match: A0A2V3IEH4_9FLOR (Flowering time control protein FY n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEH4_9FLOR) HSP 1 Score: 189 bits (480), Expect = 1.280e-50 Identity = 173/266 (65.04%), Postives = 201/266 (75.56%), Query Frame = 3
Query: 3 AHTSAVRSMAWSHSGNTLISGDHNGIIKYWQPSMTEVLHFLAHGANPIRGLSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPQHERLLASGGYDGKLMYWVVGSEKPYAEIEYAHEGTAVWDLGWHPVGHVLASGGNDHTVKFWVRNRVGDTMGCK----PELNEDG 788
AH + +RS+ WSH N ++SGD G +KYWQ +M + F AH + IR LSF TD+KFASCSDD+TV++WD+ +EER L GHGWDV+ V+WH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPQHE ASG YDG + +WVVG P A + AH+ ++VWDL WHP+GH+LA+ NDH KFW R R GD M K + NE+G
Sbjct: 136 AHDAELRSIIWSHDENWMLSGDQKGTVKYWQSNMNNLQAFHAH-KDTIRDLSFSHTDAKFASCSDDNTVKVWDFVQIREERVLEGHGWDVRCVDWHPSYPILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPQHENFFASGAYDGAIYFWVVGQSDPVASVPCAHQ-SSVWDLDWHPMGHILATSSNDHATKFWTRQRPGDQMNDKYSASGQPNEEG 399
BLAST of mRNA_S-dermatodea_contig11155.751.1 vs. uniprot
Match: A0A8J9TYG5_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TYG5_PHATR) HSP 1 Score: 187 bits (474), Expect = 4.310e-50 Identity = 175/250 (70.00%), Postives = 196/250 (78.40%), Query Frame = 3
Query: 3 AHTSAVRSMAWSHSGNTLISGDHNGIIKYWQPSMTEVLHFLAHGANPIRGLSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPQHERLLASGGYDGKLMYWVVG---SEKPYAEIEYAHEGTAVWDLGWHPVGHVLASGGNDHTVKFWVRNR 743
AH ++ RSMAWSH+ N L++ D +G IKYW PS+ V +H PI GLS P+D+KF SC DD+ VR+WDW + EER L GHGWDVKTV WH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHP E + ASGG DG L+YW VG SE+P A+I YAH+ A+WDL WHP GH+LA+G ND KFW RNR
Sbjct: 154 AHDASFRSMAWSHNRNYLLTSDASGNIKYWSPSIAPVQSIDSHNKQPIHGLSISPSDTKFVSCGDDAAVRVWDWASHSEERTLEGHGWDVKTVAWHPRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLQETVFASGGMDGTLIYWNVGAKGSEEPAAKIPYAHD-MAIWDLQWHPAGHMLATGSNDRQTKFWARNR 402
BLAST of mRNA_S-dermatodea_contig11155.751.1 vs. uniprot
Match: A0A182IMX9_9DIPT (Uncharacterized protein n=1 Tax=Anopheles atroparvus TaxID=41427 RepID=A0A182IMX9_9DIPT) HSP 1 Score: 195 bits (496), Expect = 4.710e-50 Identity = 103/262 (39.31%), Postives = 127/262 (48.47%), Query Frame = 3
Query: 3 AHTSAVRSMAWSHSGNTLISGDHNGIIKYWQPSMTEVLHFLAHGANPIRGLSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---HPQHERLLASGGYDGKLMYWVVGSEKPYAEIEYAHEGTAVWDLGWHPVGHVLASGGNDHTVKFWVRNRVGDTMGCKPELN 779
AH +VR+M WSH+ N +++GDH G +KYWQ +M V F AH +PIRG+SF P+D+KFASCSDD TVR+WD+ +EER L GHG DVK V WH HP HE L ASGG DG +++W VG++K I+ AHE + VW L WHP+GH+L SG NDHTVKFW RNR GD M K LN
Sbjct: 180 AHDVSVRTMVWSHNDNWMVTGDHGGFVKYWQSNMNNVKMFQAH-KDPIRGISFSPSDAKFASCSDDGTVRVWDFLRCQEERVLRGHGADVKCVHWHPQKALIVSGSKDNQQPIKLWDPKCGQALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFDLRNLSEEVQVFRGHKKEASAVSWHPVHEGLFASGGSDGSILFWNVGTDKEVGSIDMAHE-SIVWTLAWHPLGHILCSGSNDHTVKFWTRNRPGDQMRDKYNLN 439
BLAST of mRNA_S-dermatodea_contig11155.751.1 vs. uniprot
Match: A0A182QAA4_9DIPT (Uncharacterized protein n=2 Tax=Neomyzomyia TaxID=44536 RepID=A0A182QAA4_9DIPT) HSP 1 Score: 194 bits (493), Expect = 1.290e-49 Identity = 102/262 (38.93%), Postives = 127/262 (48.47%), Query Frame = 3
Query: 3 AHTSAVRSMAWSHSGNTLISGDHNGIIKYWQPSMTEVLHFLAHGANPIRGLSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---HPQHERLLASGGYDGKLMYWVVGSEKPYAEIEYAHEGTAVWDLGWHPVGHVLASGGNDHTVKFWVRNRVGDTMGCKPELN 779
AH +VR+M WSH+ N +++GDH G +KYWQ +M V F AH +PIRG+SF P+D+KFASCSDD TVR+WD+ +EER L GHG DVK V WH HP HE L ASGG DG +++W VG++K I+ AH+ + VW L WHP+GH+L SG NDHTVKFW RNR GD M K LN
Sbjct: 183 AHDVSVRTMVWSHNDNWMVTGDHGGFVKYWQSNMNNVKMFQAH-KDPIRGISFSPSDAKFASCSDDGTVRVWDFLRCQEERVLRGHGADVKCVHWHPQKALIVSGSKDNQQPIKLWDPKCGQALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFDLRNLSEEVQVFRGHKKEASAVSWHPVHEGLFASGGSDGSILFWNVGTDKEVGSIDMAHD-SIVWTLAWHPLGHILCSGSNDHTVKFWTRNRPGDQMRDKYNLN 442
BLAST of mRNA_S-dermatodea_contig11155.751.1 vs. uniprot
Match: W5JQJ3_ANODA (Wd-repeat protein n=7 Tax=Nyssorhynchus TaxID=44543 RepID=W5JQJ3_ANODA) HSP 1 Score: 194 bits (492), Expect = 1.740e-49 Identity = 102/262 (38.93%), Postives = 127/262 (48.47%), Query Frame = 3
Query: 3 AHTSAVRSMAWSHSGNTLISGDHNGIIKYWQPSMTEVLHFLAHGANPIRGLSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---HPQHERLLASGGYDGKLMYWVVGSEKPYAEIEYAHEGTAVWDLGWHPVGHVLASGGNDHTVKFWVRNRVGDTMGCKPELN 779
AH +VR+M WSH+ N +++GDH G +KYWQ +M V F AH +PIRG+SF P+D+KFASCSDD TVR+WD+ +EER L GHG DVK V WH HP HE L ASGG DG +++W VG++K I+ AH+ + VW L WHP+GH+L SG NDHTVKFW RNR GD M K LN
Sbjct: 181 AHDVSVRTMVWSHNDNWMVTGDHGGYVKYWQSNMNNVKMFQAH-KDPIRGISFSPSDAKFASCSDDGTVRVWDFLRCQEERVLRGHGADVKCVHWHPQKALIVSGSKDNQQPIKLWDPKCGQALATLHAHKSTVMDLRWNDNGNWLVTASRDHLLKLFDLRNLSEEIQVFRGHKKEASAVSWHPVHEGLFASGGSDGSILFWNVGTDKEVGSIDMAHD-SIVWTLAWHPLGHILCSGSNDHTVKFWTRNRPGDQMRDKYNLN 440
BLAST of mRNA_S-dermatodea_contig11155.751.1 vs. uniprot
Match: A0A084W3H2_ANOSI (AGAP001362-PA-like protein n=1 Tax=Anopheles sinensis TaxID=74873 RepID=A0A084W3H2_ANOSI) HSP 1 Score: 193 bits (491), Expect = 2.210e-49 Identity = 102/262 (38.93%), Postives = 126/262 (48.09%), Query Frame = 3
Query: 3 AHTSAVRSMAWSHSGNTLISGDHNGIIKYWQPSMTEVLHFLAHGANPIRGLSFGPTDSKFASCSDDSTVRIWDWEYYKEERALTGHGWDVKTVEWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---HPQHERLLASGGYDGKLMYWVVGSEKPYAEIEYAHEGTAVWDLGWHPVGHVLASGGNDHTVKFWVRNRVGDTMGCKPELN 779
AH +VR+M WSH+ N +++GDH G +KYWQ +M V F AH +PIRG+SF P+D+KFASCSDD TVR+WD+ +EER L GHG DVK V WH HP HE L ASGG DG +++W VG+ K I+ AH+ + VW L WHP+GH+L SG NDHTVKFW RNR GD M K LN
Sbjct: 180 AHDVSVRTMVWSHNDNWMVTGDHGGFVKYWQSNMNNVKMFQAH-KDPIRGISFSPSDAKFASCSDDGTVRVWDFLRCQEERVLRGHGADVKCVHWHPQKALIVSGSKDNQQPIKLWDPKCGQALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFDLRNLSEEVQVFRGHKREASAVSWHPVHEGLFASGGSDGSILFWNVGTNKEVGSIDIAHD-SIVWTLAWHPLGHILCSGSNDHTVKFWTRNRPGDQMRDKYNLN 439 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11155.751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11155.751.1 >prot_S-dermatodea_contig11155.751.1 ID=prot_S-dermatodea_contig11155.751.1|Name=mRNA_S-dermatodea_contig11155.751.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=545bp MAWSHSGNTLISGDHNGIIKYWQPSMTEVLHFLAHGANPIRGLSFGPTDSback to top mRNA from alignment at S-dermatodea_contig11155:1005..7055- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11155.751.1 ID=mRNA_S-dermatodea_contig11155.751.1|Name=mRNA_S-dermatodea_contig11155.751.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6051bp|location=Sequence derived from alignment at S-dermatodea_contig11155:1005..7055- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11155:1005..7055- >mRNA_S-dermatodea_contig11155.751.1 ID=mRNA_S-dermatodea_contig11155.751.1|Name=mRNA_S-dermatodea_contig11155.751.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3270bp|location=Sequence derived from alignment at S-dermatodea_contig11155:1005..7055- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |