mRNA_S-dermatodea_contig11133.738.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11133.738.1
Unique NamemRNA_S-dermatodea_contig11133.738.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig11133.738.1 vs. uniprot
Match: A0A6H5KQ87_9PHAE (ABC protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ87_9PHAE)

HSP 1 Score: 446 bits (1146), Expect = 1.400e-145
Identity = 232/299 (77.59%), Postives = 252/299 (84.28%), Query Frame = 1
Query:    1 AVDKLDLTMYTGQITALLGHNGAGKTTTIGMLTGMIPVTSGVAFVAGRDVVSDMVTIRHSLGVCPQHDILYPDLTVREHLRMYAVLKAVPGSRLQEVIKATLSDVGLTEKENELTKTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKNSEGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSLFLKNHYGVGCFVFL----------------SILFASGW------------QEEGVRPIKHLVRSYVREATLLSNVGAEVSFQLPNDASGSFEAMLTEI 813
            AVD LDLTMY+GQITALLGHNGAGKTTTIGMLTGMIPVTSG AFVAGRDV++DM  IR SLGVCPQHDILYPDLTVREHLRMYAVLK+VP +RLQ+ I ATL+DVGLTEKEN+LT TLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKN EGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSS+FLKNHYGVG  + +                + + + G             QE+GV+PIKHLVRS+V+EATLLSNVGAEVSFQLPNDAS SF+ ML+EI
Sbjct:  538 AVDNLDLTMYSGQITALLGHNGAGKTTTIGMLTGMIPVTSGSAFVAGRDVIADMANIRRSLGVCPQHDILYPDLTVREHLRMYAVLKSVPRARLQQTITATLNDVGLTEKENQLTTTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKNREGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSIFLKNHYGVGYNLTIVRDIQGAATAAADPTAAAMSSQGGNDNEQGVNTTATQEQGVKPIKHLVRSHVKEATLLSNVGAEVSFQLPNDASSSFQGMLSEI 836          
BLAST of mRNA_S-dermatodea_contig11133.738.1 vs. uniprot
Match: D8LFQ4_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ4_ECTSI)

HSP 1 Score: 443 bits (1140), Expect = 1.470e-145
Identity = 236/299 (78.93%), Postives = 249/299 (83.28%), Query Frame = 1
Query:    1 AVDKLDLTMYTGQITALLGHNGAGKTTTIGMLTGMIPVTSGVAFVAGRDVVSDMVTIRHSLGVCPQHDILYPDLTVREHLRMYAVLKAVPGSRLQEVIKATLSDVGLTEKENELTKTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKNSEGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSLFLKNHYGVGCFVFL-----------SILFASGW-----------------QEEGVRPIKHLVRSYVREATLLSNVGAEVSFQLPNDASGSFEAMLTEI 813
            AVDKLDLTMY+GQITALLGHNGAGKTTTIGMLTGMIPVTSG AFVAGRDV +DMV+IR+SLGVCPQHDILYPDLTVREHLRMYAVLK+VP S LQE I  TL+DVGLTEKENELT TLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKN EGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSS+FLKNHYGVG  + +              F SG                  QE GV+PIK LVRS+V+ ATLLSNVGAEVSFQLPNDAS SF+ MLTEI
Sbjct:  683 AVDKLDLTMYSGQITALLGHNGAGKTTTIGMLTGMIPVTSGSAFVAGRDVNTDMVSIRNSLGVCPQHDILYPDLTVREHLRMYAVLKSVPSSELQEAITNTLNDVGLTEKENELTTTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKNREGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSIFLKNHYGVGYNLTIVREIQGAESDMKPAFESGTSAEGKIDEDIGVNNTAAQEAGVKPIKRLVRSHVKAATLLSNVGAEVSFQLPNDASPSFQGMLTEI 981          
BLAST of mRNA_S-dermatodea_contig11133.738.1 vs. uniprot
Match: A0A6H5KPW7_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPW7_9PHAE)

HSP 1 Score: 439 bits (1130), Expect = 1.690e-145
Identity = 234/300 (78.00%), Postives = 249/300 (83.00%), Query Frame = 1
Query:    1 AVDKLDLTMYTGQITALLGHNGAGKTTTIGMLTGMIPVTSGVAFVAGRDVVSDMVTIRHSLGVCPQHDILYPDLTVREHLRMYAVLKAVPGSRLQEVIKATLSDVGLTEKENELTKTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKNSEGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSLFLKNHYGVGCFVFL-----------SILFASGW------------------QEEGVRPIKHLVRSYVREATLLSNVGAEVSFQLPNDASGSFEAMLTEI 813
            AVDKLDLTMY+GQITALLGHNGAGKTTTIGMLTGMIPVTSG AFVAGRDV +DMV+IR+SLGVCPQHDILYPDLTVREHLRMYAVLK+VP S LQE I  TL+DVGLTEKEN+LT TLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKN EGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSS+FLKN+YGVG  + +              F SG                   QE GV+PIK LVRS+V+EATLLSNVGAEVSFQLPN AS SF+ MLTEI
Sbjct:  553 AVDKLDLTMYSGQITALLGHNGAGKTTTIGMLTGMIPVTSGSAFVAGRDVKTDMVSIRNSLGVCPQHDILYPDLTVREHLRMYAVLKSVPSSELQEAITNTLNDVGLTEKENQLTTTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKNREGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSIFLKNYYGVGYNLTIVREIQGAEFDMKPAFESGMDAEGKIDEADIGVNNTAAQEAGVKPIKRLVRSHVKEATLLSNVGAEVSFQLPNAASPSFQGMLTEI 852          
BLAST of mRNA_S-dermatodea_contig11133.738.1 vs. uniprot
Match: D7FZE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE9_ECTSI)

HSP 1 Score: 447 bits (1150), Expect = 1.810e-141
Identity = 233/299 (77.93%), Postives = 250/299 (83.61%), Query Frame = 1
Query:    1 AVDKLDLTMYTGQITALLGHNGAGKTTTIGMLTGMIPVTSGVAFVAGRDVVSDMVTIRHSLGVCPQHDILYPDLTVREHLRMYAVLKAVPGSRLQEVIKATLSDVGLTEKENELTKTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKNSEGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSLFLKNHYGVGCFVFL----------------------------SILFASGWQEEGVRPIKHLVRSYVREATLLSNVGAEVSFQLPNDASGSFEAMLTEI 813
            AVD LDLTMY+GQITALLGHNGAGKTTTIGMLTGMIPVTSG AFVAGRDV++DM  IR SLGVCPQHDILYPDLTVREHLRMYAVLK+VP +RLQ+ I ATL+DVGLTEKENELT TLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKN EGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSS+FLKNHYGVG  + +                              +  +  QE+GV+PIKHLVRS+V+EATLLSNVGAEVSFQLPNDAS SF+ MLTEI
Sbjct:  714 AVDNLDLTMYSGQITALLGHNGAGKTTTIGMLTGMIPVTSGSAFVAGRDVIADMANIRRSLGVCPQHDILYPDLTVREHLRMYAVLKSVPRARLQQTITATLNDVGLTEKENELTTTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKNREGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSIFLKNHYGVGYNLTIVRDIQGADTAAADPTAAAISSEEENDNEQGVNTTATQEQGVKPIKHLVRSHVKEATLLSNVGAEVSFQLPNDASSSFQDMLTEI 1012          
BLAST of mRNA_S-dermatodea_contig11133.738.1 vs. uniprot
Match: D7FZE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE8_ECTSI)

HSP 1 Score: 441 bits (1135), Expect = 1.960e-139
Identity = 235/300 (78.33%), Postives = 249/300 (83.00%), Query Frame = 1
Query:    1 AVDKLDLTMYTGQITALLGHNGAGKTTTIGMLTGMIPVTSGVAFVAGRDVVSDMVTIRHSLGVCPQHDILYPDLTVREHLRMYAVLKAVPGSRLQEVIKATLSDVGLTEKENELTKTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKNSEGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSLFLKNHYGVGCFVFL-----------SILFASGW------------------QEEGVRPIKHLVRSYVREATLLSNVGAEVSFQLPNDASGSFEAMLTEI 813
            AVDKLDLTMY+GQITALLGHNGAGKTTTIGMLTGMIPVTSG AFVAGRDV +DMV+IR+SLGVCPQHDILYPDLTVREHLRMYAVLK+VP S LQE I  TL+DVGLTEKENELT TLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKN EGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSS+FLKN+YGVG  + +              F SG                   QE GV+PIK LVRS+V+ ATLLSNVGAEVSFQLPNDAS SF+ MLTEI
Sbjct:  692 AVDKLDLTMYSGQITALLGHNGAGKTTTIGMLTGMIPVTSGSAFVAGRDVKTDMVSIRNSLGVCPQHDILYPDLTVREHLRMYAVLKSVPSSELQEAITNTLNDVGLTEKENELTTTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKNREGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSIFLKNYYGVGYNLTIVREIQGAESDMKPAFESGMNAEEKIDEEDIGVNNTAAQEAGVKPIKRLVRSHVKAATLLSNVGAEVSFQLPNDASPSFQGMLTEI 991          
BLAST of mRNA_S-dermatodea_contig11133.738.1 vs. uniprot
Match: D7FZA6_ECTSI (ATP-binding Cassette (ABC) Superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA6_ECTSI)

HSP 1 Score: 392 bits (1008), Expect = 6.620e-122
Identity = 212/300 (70.67%), Postives = 232/300 (77.33%), Query Frame = 1
Query:    1 AVDKLDLTMYTGQITALLGHNGAGKTTTIGMLTGMIPVTSGVAFVAGRDVVSDMVTIRHSLGVCPQHDILYPDLTVREHLRMYAVLKAVPGSRLQEVIKATLSDVGLTEKENELTKTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKNSEGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSLFLKNHYGVGCFVFL-------SILFASGWQ----------EEG------------VRPIKHLVRSYVREATLLSNVGAEVSFQLPNDASGSFEAMLTEI 813
            AVDKLDLTMY GQITALLGHNGAGKTT + MLTGMIP T G AF+AGRD   DM  IR SLGVCPQHDILYP LTV+EHLR+YAVLK VP + L E IK TL DVGLTEKENE TKTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKN EGRV+VLTTHFMDEADLLGDRVAIMADG L+CCGSSLFLK HYGVG  + +       S    +G +          EEG            V PIK LVRS+V+ + LLS+VGAE+SFQLP++AS SF+ ML E+
Sbjct:  708 AVDKLDLTMYAGQITALLGHNGAGKTTLLAMLTGMIPATEGSAFIAGRDANEDMSNIRKSLGVCPQHDILYPTLTVKEHLRLYAVLKGVPHADLGEAIKKTLLDVGLTEKENEKTKTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKNREGRVVVLTTHFMDEADLLGDRVAIMADGMLKCCGSSLFLKKHYGVGYNLTVVRGIEGDSPSSPNGQEGGNAVSESKLEEGTPRHENDKSHLQVGPIKALVRSHVKASVLLSDVGAELSFQLPSEASSSFKGMLLEM 1007          
BLAST of mRNA_S-dermatodea_contig11133.738.1 vs. uniprot
Match: A0A6H5JS94_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS94_9PHAE)

HSP 1 Score: 367 bits (943), Expect = 5.550e-116
Identity = 208/337 (61.72%), Postives = 230/337 (68.25%), Query Frame = 1
Query:    1 AVDKLDLTMYTGQITALLGHNGAGK-------------------------------------TTTIGMLTGMIPVTSGVAFVAGRDVVSDMVTIRHSLGVCPQHDILYPDLTVREHLRMYAVLKAVPGSRLQEVIKATLSDVGLTEKENELTKTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKNSEGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSLFLKNHYGVGCFVFL-------SILFASGWQ----------EEG------------VRPIKHLVRSYVREATLLSNVGAEVSFQLPNDASGSFEAMLTEI 813
            AVDKLDLTMY GQITALLGHNGAGK                                     TT + MLTGM P T G AF+AGRD   DM  IR SLGVCPQHDILYP LTV+EHLR+YAVLK VP + L E +K TL DVGLTEKENE TKTLSGGQKRKLSVGIALIG SKVVFLDEPTSGMDPHSRRFTWDLIRKN EGRV+VLTTHFMDEADLLGDRVAIMADG L+CCGSSLFLK HYGVG  + +       S    +G +          EEG            V PIK +VRS+V+ + LLS+VGAE+SFQLP++AS SF+ ML E+
Sbjct:  448 AVDKLDLTMYAGQITALLGHNGAGKVRVWSTTRSKGILQFACNRLVCVLPNAWVSPPLAVWQTTLLAMLTGMTPATEGNAFIAGRDANKDMSNIRKSLGVCPQHDILYPTLTVKEHLRLYAVLKGVPHANLGEALKKTLLDVGLTEKENEKTKTLSGGQKRKLSVGIALIGDSKVVFLDEPTSGMDPHSRRFTWDLIRKNREGRVVVLTTHFMDEADLLGDRVAIMADGMLKCCGSSLFLKKHYGVGYNLTVVRGIEGDSPSSTNGKEGGNGVSESKLEEGTPHHENDKSHLQVGPIKAVVRSHVKGSVLLSDVGAELSFQLPSEASSSFKGMLLEM 784          
BLAST of mRNA_S-dermatodea_contig11133.738.1 vs. uniprot
Match: A0A7S3XYR3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYR3_HETAK)

HSP 1 Score: 344 bits (882), Expect = 7.810e-105
Identity = 184/312 (58.97%), Postives = 213/312 (68.27%), Query Frame = 1
Query:    1 AVDKLDLTMYTGQITALLGHNGAGKTTTIGMLTGMIPVTSGVAFVAGRDVVSDMVTIRHSLGVCPQHDILYPDLTVREHLRMYAVLKAVPGSRLQEVIKATLSDVGLTEKENELTKTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKNSEGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSLFLKNHYGVGCFVFLSILFASGWQEEGVRPIKH-----------------------------------------LVRSYVREATLLSNVGAEVSFQLPNDASGSFEAMLTEI 813
            AV  L LTMY GQITALLGHNGAGKTTTI MLTG++  T G AF+ GRDV + M  IR +LGVCPQHDILYPDLTVREHLRMYAV K VP + L+  ++  + +VGLTEK N+  K+LSGGQKRKLSVGIA IG SKVVFLDEPTSGMDP+SRRFTWD+IR+N EGRVIVLTTHFMDEADLLGDRVAIMADG LRCCG+SLFLK+ +GVG  + L         +  + P+                                           LVR +   ATLLSNVGAE+SFQLP DAS +F+ +L  +
Sbjct:  686 AVHDLGLTMYRGQITALLGHNGAGKTTTISMLTGLLAPTGGAAFIQGRDVFTQMKFIRRTLGVCPQHDILYPDLTVREHLRMYAVFKGVPRAALKGAVEKMIVEVGLTEKRNKKAKSLSGGQKRKLSVGIAFIGDSKVVFLDEPTSGMDPYSRRFTWDVIRRNREGRVIVLTTHFMDEADLLGDRVAIMADGQLRCCGTSLFLKSRFGVGYNLTLVKKMRPPPSQAALNPLHEGKEEDPAKQDXXXXXXXXXXXXDQQLALQGQSLCDEEGLVALVRGHAPSATLLSNVGAEISFQLPTDASAAFKPLLNHL 997          
BLAST of mRNA_S-dermatodea_contig11133.738.1 vs. uniprot
Match: A0A7S4D9H3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9H3_HETAK)

HSP 1 Score: 339 bits (869), Expect = 4.400e-103
Identity = 183/295 (62.03%), Postives = 213/295 (72.20%), Query Frame = 1
Query:    1 AVDKLDLTMYTGQITALLGHNGAGKTTTIGMLTGMIPVTSGVAFVAGRDVVSDMVTIRHSLGVCPQHDILYPDLTVREHLRMYAVLKAVPGSRLQEVIKATLSDVGLTEKENELTKTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKNSEGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSLFLKNHYGVGCFVFLSILF-----------ASGWQEEGVRP-------------IKHLVRSYVREATLLSNVGAEVSFQLPNDASGSFEAMLTEI 813
            AV  L LTMY GQITALLGHNGAGKTTTI MLTG++  T G AF+ GRDV + M  IR +LGVCPQHDILYPDLTVREHLRMYAV K VP + L+  ++  + +VGLTEK N+  K+LSGGQKRKLSVGIA IG SKVVFLDEPTSGMDP+SRRFTWD+IR+N EGRVIVLTTHFMDEADLLGDRVAI+ +G LRCCGSSLFLK+ +G G  + L   F           AS   E  + P             I  LV  +V  A LLSNVGAE+SFQLP ++S +F ++  E+
Sbjct:  686 AVHDLGLTMYRGQITALLGHNGAGKTTTISMLTGLLAPTGGAAFIQGRDVFTQMKFIRRTLGVCPQHDILYPDLTVREHLRMYAVFKGVPRAALKGAVEKMIVEVGLTEKRNKKAKSLSGGQKRKLSVGIAFIGDSKVVFLDEPTSGMDPYSRRFTWDVIRRNREGRVIVLTTHFMDEADLLGDRVAIVGEGRLRCCGSSLFLKSRFGAGYNLTLVKQFEREKEVESKEEASPAPEARIPPHNTSPATCNKDKEILDLVAHHVGGAKLLSNVGAEMSFQLPQESSKNFPSLFFEL 980          
BLAST of mRNA_S-dermatodea_contig11133.738.1 vs. uniprot
Match: A0A1V9YT02_9STRA (ATP-binding Cassette (ABC) Superfamily (Fragment) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YT02_9STRA)

HSP 1 Score: 320 bits (821), Expect = 1.720e-101
Identity = 168/268 (62.69%), Postives = 206/268 (76.87%), Query Frame = 1
Query:    1 AVDKLDLTMYTGQITALLGHNGAGKTTTIGMLTGMIPVTSGVAFVAGRDVVSDMVTIRHSLGVCPQHDILYPDLTVREHLRMYAVLKAVPGSRLQEVIKATLSDVGLTEKENELTKTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWDLIRKNSEGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSLFLKNHYGVGCFVFLSILFASGWQEEGVRPIKHLVRSYVREATLLSNVGAEVSFQLPNDASGSFEAML 804
            AV  L++TMY GQITALLGHNGAGKTTTIGMLTG+ P T G A+V G+ + +DM  +R S+GVCPQHD+LY +LTVREHL +YA LKAVP +  Q  I A L++VGLTEK +  T  LSGGQKRKLSV IAL+G S+VVFLDEPTSGMDP+SRRFTW+++++N E RV+VLTTHFMDEADLLGDR+ I+ADG L C GSSLFLK+ YG G    L+++   G     V  +   VR++V +A +LSNVGAEV  QLP+ ASG F A+L
Sbjct:   25 AVHGLNVTMYAGQITALLGHNGAGKTTTIGMLTGLFPPTKGTAYVFGQTITADMDALRASMGVCPQHDVLYDELTVREHLALYAALKAVPDAAAQ--IDALLAEVGLTEKRHVATAKLSGGQKRKLSVAIALLGQSRVVFLDEPTSGMDPYSRRFTWNVLQRNRENRVMVLTTHFMDEADLLGDRIVILADGRLCCAGSSLFLKHLYGTG--YNLTLVKRDGCD---VAAVVAFVRAHVADANVLSNVGAEVVLQLPSAASGGFPALL 285          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11133.738.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQ87_9PHAE1.400e-14577.59ABC protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP... [more]
D8LFQ4_ECTSI1.470e-14578.93ABC transporter domain-containing protein n=1 Tax=... [more]
A0A6H5KPW7_9PHAE1.690e-14578.00ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FZE9_ECTSI1.810e-14177.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZE8_ECTSI1.960e-13978.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZA6_ECTSI6.620e-12270.67ATP-binding Cassette (ABC) Superfamily n=1 Tax=Ect... [more]
A0A6H5JS94_9PHAE5.550e-11661.72ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7S3XYR3_HETAK7.810e-10558.97Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S4D9H3_HETAK4.400e-10362.03Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A1V9YT02_9STRA1.720e-10162.69ATP-binding Cassette (ABC) Superfamily (Fragment) ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11133contigS-dermatodea_contig11133:269..2746 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score434.1
Seed ortholog evalue4.6e-119
Seed eggNOG ortholog2880.D7FZE9
KEGG koko:K05643,ko:K05645
KEGG TC3.A.1.211
KEGG Pathwayko02010,map02010
GOsGO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0009653,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0030587,GO:0031288,GO:0032502,GO:0033036,GO:0042623,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044464,GO:0048856,GO:0051179,GO:0051234,GO:0051703,GO:0051704,GO:0055085,GO:0071702,GO:0090702,GO:0099120
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1131@1,KOG0059@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Hectar predicted targeting categoryother localisation
Exons5
Model size813
Cds size789
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11133.738.1prot_S-dermatodea_contig11133.738.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11133 293..2746 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924188.7332485-UTR-S-dermatodea_contig11133:268..2921622924188.7332485-UTR-S-dermatodea_contig11133:268..292Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11133 269..292 +
1694079079.1197448-UTR-S-dermatodea_contig11133:268..2921694079079.1197448-UTR-S-dermatodea_contig11133:268..292Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11133 269..292 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924188.7502751-CDS-S-dermatodea_contig11133:292..3431622924188.7502751-CDS-S-dermatodea_contig11133:292..343Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11133 293..343 +
1694079079.1313508-CDS-S-dermatodea_contig11133:292..3431694079079.1313508-CDS-S-dermatodea_contig11133:292..343Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11133 293..343 +
1622924188.7688596-CDS-S-dermatodea_contig11133:725..9471622924188.7688596-CDS-S-dermatodea_contig11133:725..947Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11133 726..947 +
1694079079.140962-CDS-S-dermatodea_contig11133:725..9471694079079.140962-CDS-S-dermatodea_contig11133:725..947Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11133 726..947 +
1622924188.7806406-CDS-S-dermatodea_contig11133:1236..13941622924188.7806406-CDS-S-dermatodea_contig11133:1236..1394Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11133 1237..1394 +
1694079079.1503327-CDS-S-dermatodea_contig11133:1236..13941694079079.1503327-CDS-S-dermatodea_contig11133:1236..1394Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11133 1237..1394 +
1622924188.7924895-CDS-S-dermatodea_contig11133:1571..17451622924188.7924895-CDS-S-dermatodea_contig11133:1571..1745Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11133 1572..1745 +
1694079079.1600082-CDS-S-dermatodea_contig11133:1571..17451694079079.1600082-CDS-S-dermatodea_contig11133:1571..1745Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11133 1572..1745 +
1622924188.810327-CDS-S-dermatodea_contig11133:2562..27461622924188.810327-CDS-S-dermatodea_contig11133:2562..2746Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11133 2563..2746 +
1694079079.171584-CDS-S-dermatodea_contig11133:2562..27461694079079.171584-CDS-S-dermatodea_contig11133:2562..2746Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11133 2563..2746 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11133.738.1

>prot_S-dermatodea_contig11133.738.1 ID=prot_S-dermatodea_contig11133.738.1|Name=mRNA_S-dermatodea_contig11133.738.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=263bp
MYTGQITALLGHNGAGKTTTIGMLTGMIPVTSGVAFVAGRDVVSDMVTIR
HSLGVCPQHDILYPDLTVREHLRMYAVLKAVPGSRLQEVIKATLSDVGLT
EKENELTKTLSGGQKRKLSVGIALIGGSKVVFLDEPTSGMDPHSRRFTWD
LIRKNSEGRVIVLTTHFMDEADLLGDRVAIMADGALRCCGSSLFLKNHYG
VGCFVFLSILFASGWQEEGVRPIKHLVRSYVREATLLSNVGAEVSFQLPN
DASGSFEAMLTEI
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mRNA from alignment at S-dermatodea_contig11133:269..2746+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11133.738.1 ID=mRNA_S-dermatodea_contig11133.738.1|Name=mRNA_S-dermatodea_contig11133.738.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2478bp|location=Sequence derived from alignment at S-dermatodea_contig11133:269..2746+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GCGGTTGACAAGCTCGACCTTACCATGTACACGGGTCAGATCACCGCTCT GCTCGGCCACAACGGCGCCGGCAAGGTGCGAAGAAGCTGTTTTTTAGTTT ACGTTTGGTTATTGCTTCTTGTTGTTGGTTGCGCTTATGTAGACGCGGCC TTGGACAGGCCACGGTAGGAGTAGCTGCGCGCGCCCATGCATACGTGGCG CGTAATTTCACTTCTGCCTGTCAGGCTGAGCTTGGGCCAGATTCATTCGA TGCTATATGCATATCTAGCATAGGAGGGTCCCCTGTACCATGGGGATCGC CGAAGACCGGTGGCCAGGAGGTGATGAGCTACAGTGGCGGAGAAAATACG CATCGTGTTGTTTGCTGCTGTCGTATGGCCCTGTAACTCAGCAGCACTAA CGCCAATCACACCAACGCTTCTTCTTTCACGTCACCCCGCCGTGTCTGTT GCTACAGACAACCACGATCGGCATGCTGACGGGGATGATCCCGGTGACCT CGGGGGTCGCTTTTGTGGCTGGCCGCGACGTTGTCAGCGACATGGTGACC ATCCGGCACTCGCTTGGCGTGTGCCCCCAGCACGACATCCTCTACCCCGA CCTTACCGTCAGGGAGCACCTGCGCATGTACGCCGTCCTCAAAGCGGTAC CGGGGTCTCGCCTGCAGGAGGTCATTAAGGTGCGAATACGTCGGGGTAGC TGAAAGCGTGTGCCTTGTAATCGAAAGGGCGATCGAAGCTGGCGTGTTTA CTCGGGAACCACACAGCGGAAACGTCGCGGTCGGTACTGCTGTGTTTGGA AGAAGATCAAACAAGAGGGGGGGGCGACATAACTATCGAGGATATGTCTG GGATTGCTATACACGACCTCAGCGTGGCACCAATCTCGAAGCTGCGGACA CCACTCCTTTCGATTGACGGAAGCAATCGCCAGGTCTCATGATACACCCC CTTATCCGTAAAACACAGGCCACCTTGTCGGACGTCGGGCTGACAGAGAA GGAGAACGAGCTCACCAAGACCCTGTCCGGAGGTCAAAAGCGTAAGCTCT CCGTCGGCATCGCTCTAATCGGCGGGTCGAAGGTGGTGTTCCTTGATGAG CCTACCTCGGGCATGGACCCTCACAGGTGAGACGGCAGATGCTCGGCGAC TCTCTTTAGAAAGAGTCGTGGTGTCATTGCGGCACGGGGATACCACATGC GCTGCCTTCTGCACTGCGTCCTGGCAGCTCTACTGTATGACGACGTCTGA CTGCTATTCCACCGTGTCCATGGTGCACCGTATAACTCTCGACCTTCCCG CAGCCGGCGTTTCACGTGGGACCTGATCCGCAAGAACAGCGAAGGGCGCG TGATCGTGCTAACGACGCACTTCATGGACGAGGCCGACCTGCTCGGCGAC CGCGTGGCGATCATGGCTGACGGCGCGCTTCGCTGCTGTGGCAGCTCGCT CTTCCTCAAGAACCACTACGGCGTCGGGTGAGCTGCCATTCGTGTGCCAT ACATCGGGCCGTGCTTTGTGCGGCGCGTTGCACCTCAACTACCCTAGCTA GGTGCTCCAACAGAGACATTTTTTTACCGTTTTGACCCGGGTTTCCGGCG TTCGTTTTACGGTATTGGTCCCGCTGCTTCCAGATACAACCTTACGATCG TACGGGACATCAACAGCACCGACGACATGCAGCCTGCCTTCGAGGCCAGC CTTGCGGACGAGAAGGCGGACGAAGAACGCGGCGTCAACACCACCGCCAC CCAGGTTGGTACCTGGCCGCAACATCTTTATTAATTACAGTAGTAGCGCT TTGCACGATTGTTTGTTTAGAATTTAGAGGAGATTCTTGATGCAATAGTT TGAGGCCAATATGTGGAGAAGAGTATAGTCTCTAATACCTATACACTTTT GATAGTAGGGTTTTAGAGTAGTCATTTTCAGAGTAGTGGCCTGATTTTTC CAAACTCACATATGCATCGAATTCGTGGCTACCCTCTAGTTGTGTTGAAA GTGTGGTGTGATACGTGTTTGGGGTACTCTGGCATGTGTAGAACCCGTCG GGCTCTAGAAAGAGACGTTTGGGCCGTGCTGTTCCTGATCCTGGCGCGGA ATCGTCGAGGAAACGGATTCGTTGCGGAGTTGTAGTTTTTTTGCCGTTAT AACATATTGGAGGTAAAAACCGGCGAGAGCCCGAACATGGTGCAAACGTA TTACACTTTGTTCTAAGAAGGACAAAGCGCGCGCGAGGTGGGCGGTGGGC ATCAGAGCCGAGGGGTTGCTCTCGTTCTCACGCCTTGACGCGAGCTGCTT CGTTTTTCTCTCCATTCTTTTTGCTTCTGGTTGGCAGGAGGAAGGTGTGA GGCCGATCAAGCACCTCGTGCGGTCGTACGTACGGGAGGCTACTCTACTC AGTAACGTCGGCGCGGAGGTGTCCTTCCAGCTCCCCAACGACGCCTCAGG CTCGTTCGAGGCCATGCTCACCGAAATA
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Coding sequence (CDS) from alignment at S-dermatodea_contig11133:269..2746+

>mRNA_S-dermatodea_contig11133.738.1 ID=mRNA_S-dermatodea_contig11133.738.1|Name=mRNA_S-dermatodea_contig11133.738.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1578bp|location=Sequence derived from alignment at S-dermatodea_contig11133:269..2746+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTACACGGGTCAGATCACCGCTCTGCTCGGCCACAACGGCGCCGGCAA
GATGTACACGGGTCAGATCACCGCTCTGCTCGGCCACAACGGCGCCGGCA
AGACAACCACGATCGGCATGCTGACGGGGATGATCCCGGTGACCTCGGGG
GTCGCTTTTGTGGCTGGCCGCGACGTTGTCAGCGACATGGTGACCATCCG
GCACTCGCTTGGCGTGTGCCCCCAGCACGACATCCTCTACCCCGACCTTA
CCGTCAGGGAGCACCTGCGCATGTACGCCGTCCTCAAAGCGGTACCGGGG
TCTCGCCTGCAGGAGGTCATTAAGACAACCACGATCGGCATGCTGACGGG
GATGATCCCGGTGACCTCGGGGGTCGCTTTTGTGGCTGGCCGCGACGTTG
TCAGCGACATGGTGACCATCCGGCACTCGCTTGGCGTGTGCCCCCAGCAC
GACATCCTCTACCCCGACCTTACCGTCAGGGAGCACCTGCGCATGTACGC
CGTCCTCAAAGCGGTACCGGGGTCTCGCCTGCAGGAGGTCATTAAGGCCA
CCTTGTCGGACGTCGGGCTGACAGAGAAGGAGAACGAGCTCACCAAGACC
CTGTCCGGAGGTCAAAAGCGTAAGCTCTCCGTCGGCATCGCTCTAATCGG
CGGGTCGAAGGTGGTGTTCCTTGATGAGCCTACCTCGGGCATGGACCCTC
ACAGGCCACCTTGTCGGACGTCGGGCTGACAGAGAAGGAGAACGAGCTCA
CCAAGACCCTGTCCGGAGGTCAAAAGCGTAAGCTCTCCGTCGGCATCGCT
CTAATCGGCGGGTCGAAGGTGGTGTTCCTTGATGAGCCTACCTCGGGCAT
GGACCCTCACAGCCGGCGTTTCACGTGGGACCTGATCCGCAAGAACAGCG
AAGGGCGCGTGATCGTGCTAACGACGCACTTCATGGACGAGGCCGACCTG
CTCGGCGACCGCGTGGCGATCATGGCTGACGGCGCGCTTCGCTGCTGTGG
CAGCTCGCTCTTCCTCAAGAACCACTACGGCGTCGGCCGGCGTTTCACGT
GGGACCTGATCCGCAAGAACAGCGAAGGGCGCGTGATCGTGCTAACGACG
CACTTCATGGACGAGGCCGACCTGCTCGGCGACCGCGTGGCGATCATGGC
TGACGGCGCGCTTCGCTGCTGTGGCAGCTCGCTCTTCCTCAAGAACCACT
ACGGCGTCGGCTGCTTCGTTTTTCTCTCCATTCTTTTTGCTTCTGGTTGG
CAGGAGGAAGGTGTGAGGCCGATCAAGCACCTCGTGCGGTCGTACGTACG
GGAGGCTACTCTACTCAGTAACGTCGGCGCGGAGGTGTCCTTCCAGCTCC
CCAACGACGCCTCAGGCTCGTTCGAGGCCATGCTCACCGAAATACTGCTT
CGTTTTTCTCTCCATTCTTTTTGCTTCTGGTTGGCAGGAGGAAGGTGTGA
GGCCGATCAAGCACCTCGTGCGGTCGTACGTACGGGAGGCTACTCTACTC
AGTAACGTCGGCGCGGAGGTGTCCTTCCAGCTCCCCAACGACGCCTCAGG
CTCGTTCGAGGCCATGCTCACCGAAATA
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