mRNA_S-dermatodea_contig11125.735.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11125.735.1
Unique NamemRNA_S-dermatodea_contig11125.735.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig11125.735.1 vs. uniprot
Match: D8LC72_ECTSI (CDC2-like protein kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC72_ECTSI)

HSP 1 Score: 590 bits (1520), Expect = 3.780e-201
Identity = 289/383 (75.46%), Postives = 333/383 (86.95%), Query Frame = 3 
Query:  435 VYKATRTSDGKLVALKCIKQEDGDGKGFPVTAMREMRILRQLKHKNIVDLIEVIIDGNPTPGRLSTVALVFEYLDHDISGLLDTPEASNQITPALAKSYMLQLIEGVAYMHSKHIIHRDLKGANLLISNAGHLKIADWGLARRLYEMQEKYTTKVITLWYRPPELLLKAALYGPAVDMWSVGCIVAELLTRAAAFPGKSESDQLSLIFDTCGTPTSQTWPGWRELPESDHWKDSVREIPRPSKLREKFARYGEVTLDLLAGLLALDPKRRLTAREAMQHRFFETKPLPSIPGTVTLNLHSCHEYEAKIRKKEIKRGGKGSHHGSGGMFKTKDNRVSSAVKGASASAAKNQHQQHSXQRGLHQHNGKQPSALQVSLPQAGLRSH 1583
            VYKATRT DGKLVALKCIKQEDGDGKGFPVTAMREMRILRQLKH+NIVDLIEVIIDGNPTPGRLSTVALVFEYLDHD+SGLLDTPEA+NQITP +AKS+M+QL  GVAYMH K IIHRDLKGANLLISN GHLKIADWGLARR+YEMQ+KYTTKVITLWYRPPELLLK+A+YG  VD+WSVGCIV ELLTR++ FPGK+ESDQLSLIFDT GTPTS TWPGW+ELP+SDHW++SVR+ PRPS +RE+F++YG+V LDLL GLLALDPKRRLTA++ ++H +F TKPLP++PG VTLNLHSCHEYEAKIRKK+ K+  KGS+H + G  KTK   V+SA K    SAA +QH+  S  + L Q N ++   +Q+SLPQ GL +H
Sbjct:   61 VYKATRTRDGKLVALKCIKQEDGDGKGFPVTAMREMRILRQLKHENIVDLIEVIIDGNPTPGRLSTVALVFEYLDHDLSGLLDTPEAANQITPPVAKSFMMQLSAGVAYMHDKDIIHRDLKGANLLISNTGHLKIADWGLARRVYEMQDKYTTKVITLWYRPPELLLKSAVYGSPVDLWSVGCIVGELLTRSSIFPGKNESDQLSLIFDTLGTPTSHTWPGWKELPDSDHWRESVRDHPRPSNMRERFSKYGDVVLDLLVGLLALDPKRRLTAKQTLEHPYFHTKPLPAVPGMVTLNLHSCHEYEAKIRKKDSKKSAKGSYHSAAGGSKTK---VTSARK----SAAVSQHRHSSQHQALRQQNQQKGPGMQISLPQPGLVAH 436
[Close]
BLAST of mRNA_S-dermatodea_contig11125.735.1 vs. uniprot
Match: A0A7S2UWV7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWV7_9STRA)

HSP 1 Score: 301 bits (770), Expect = 2.560e-90
Identity = 156/312 (50.00%), Postives = 208/312 (66.67%), Query Frame = 3 
Query:  435 VYKATRTSDGKLVALKCIKQEDGDGKGFPVTAMREMRILRQLKHKNIVDLIEVIIDGNPTPGRLSTVALVFEYLDHDISGLLDTPEASNQITPALAKSYMLQLIEGVAYMHSKHIIHRDLKGANLLISNAGHLKIADWGLARRLYEMQEKYTTKVITLWYRPPELLLKAALYGPAVDMWSVGCIVAELLTRAAAFPGKSESDQLSLIFDTCGTPTSQTWPGWRELPESDHWKDSVREIPRPSKLREKFARYGEVTLDLLAGLLALDPKRRLTAREAMQHRFFETKPLPSIPGTVT-LNLHSCHEYEAKIRKK 1367
            V+KA      +LVALK IK E  + +GFP+TA+RE++IL+ L HKNIV+L E++   N   G L +V +VFEYLDHD++GLLDTPE   ++     K YM QL+EGV YMH   I+HRD+KG+NLLI N G+LKIADWGLAR  YE Q  +T +VITLWYRPPELLL A  YGP +DMWSVGC+ AELL +     G++E  QL LIF  CGTPT + W G   L           E P P  +R++F  + + +LDL+  LL LDP +R+TA EA+   +F T+P+P  P  +  L++ S HE++A+ R++
Sbjct:  101 VFKARDRQTMELVALKKIKMES-EKEGFPITAIREIKILKSLSHKNIVELKEIVTSSNKGAG-LGSVYMVFEYLDHDLTGLLDTPEV--RLDDRHIKCYMKQLLEGVTYMHRNKILHRDIKGSNLLIDNRGYLKIADWGLARSWYEEQPYFTNRVITLWYRPPELLLGAPKYGPPIDMWSVGCLFAELLYKKPILQGRNEQHQLELIFKLCGTPTPENWSGAMRLKGWAANAPKKGEPPHPRVVRQRFQTFEQNSLDLVDKLLTLDPLKRITAEEALDANYFWTEPMPLEPSQLPKLSVTSAHEWDARERRR 408
[Close]
BLAST of mRNA_S-dermatodea_contig11125.735.1 vs. uniprot
Match: A0A3P3YIJ5_PLABS (Protein kinase domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YIJ5_PLABS)

HSP 1 Score: 291 bits (744), Expect = 3.070e-87
Identity = 162/356 (45.51%), Postives = 235/356 (66.01%), Query Frame = 3 
Query:  324 PCAHFATHAWVCSVRRCPRFG------RISGKIGPSACLSRI*VYKATRTSDGKLVALKCIKQEDGDGKGFPVTAMREMRILRQLKHKNIVDLIEVIIDGNPTPGRL-STVALVFEYLDHDISGLLDTPEASNQITPALAKSYMLQLIEGVAYMHSKHIIHRDLKGANLLISNAGHLKIADWGLARRLYEMQEKYTTKVITLWYRPPELLLKAALYGPAVDMWSVGCIVAELLTRAAAFPGKSESDQLSLIFDTCGTPTSQTWPGWRELPESDHWKDSVREIPRPSKLREKFARYGEVTLDLLAGLLALDPKRRLTAREAMQHRFFETKPLPSIPGTVTLNLHSCHEYEAKIRKKE 1370
            P AH A+ A  C  +R P+F       RI   IG     S   VYKA R   G+LVALK ++    + +GFP+TA+RE++IL+ L+H+NI+ L +V+   +    R  S+V +VF ++DHD++GLL+ P    +++    K Y+  +++G+ + H+K I+HRD+KG N+LISN G +K+AD+GLAR      E+YT+ V+TLWYRPPELL  A  YGPAVDMWS+GC+ AE+LT A AFPG +E DQ+  IF  CGTPT ++WPG+ +LP   + K  ++ +  P     +FA+YG + LDLL+ LL LDP +R++AREA+QH FF T+PLP  P  + +   S HEY A++RK++
Sbjct:   10 PPAHDASGARACDPKRHPQFRSDEVYQRIE-MIGKGTYGS---VYKA-RAPGGRLVALKKVRMAF-ENQGFPITAIREIKILQALEHENIIQLNDVVASTDSALDRENSSVVMVFPFMDHDLTGLLENPNV--KLSMPQIKYYLRCILQGLNHCHNKKILHRDVKGPNVLISNTGEVKLADFGLAR-FVNTDEEYTSNVVTLWYRPPELLYGARKYGPAVDMWSIGCVFAEMLTAAPAFPGATELDQIDRIFRLCGTPTPESWPGFTKLP--GYQKLRMKNV-YPRTFEARFAKYGSLVLDLLSKLLELDPAKRISAREALQHDFFWTEPLPMDPKDLPVYQQS-HEYMARMRKQQ 352
[Close]
BLAST of mRNA_S-dermatodea_contig11125.735.1 vs. uniprot
Match: A0A835YIU7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIU7_9STRA)

HSP 1 Score: 291 bits (746), Expect = 4.870e-87
Identity = 158/342 (46.20%), Postives = 215/342 (62.87%), Query Frame = 3 
Query:  366 RRCPRFGRISGKIGPSACLSRI*VYKATRTSDGKLVALKCIKQEDGDGK-----GFPVTAMREMRILRQLKHKNIVDLIEVIID--GNPTPGRLSTVALVFEYLDHDISGLLDTPEASNQITPALAKSYMLQLIEGVAYMHSKHIIHRDLKGANLLISNAGHLKIADWGLARRLYEMQEKYTTKVITLWYRPPELLLKAALYGPAVDMWSVGCIVAELLTRAAAFPGKSESDQLSLIFDTCGTPTSQTWPGWRELPESDH-WKDSVREIPRPSKLREKFARYGEVTLDLLAGLLALDPKRRLTAREAMQHRFFETKPLPSIPGTVT-LNLHSCHEYEAKIRK 1364
            RRC R       +GP    +   V+KA     G +VALK IK     G      GFP+T++RE+RIL+ L+H NI++L +V+ D  G    G+   V +VFEY+D D+ G++ TP+   Q+     KS+M QL+ G+ +MH   +IHRDLKGANLLI+  G LKI D+GLAR ++E  ++ T+KVITLWYRPPELL++A LYG  VDMWSVGCI  E+L R A  PGK E +Q+ LIF  CGTPT ++WPG  +LP+ +  WK  V + PR   L+ +F       +DLL  LL LDP +R+TA +A+ H +F   P    PG +  L+  SCHE+EAK R+
Sbjct:   10 RRCARDVSEYALLGPVGEGAYGVVWKANDPLTGDMVALKMIKTGAESGAPDAELGFPITSVREIRILKLLRHDNIINLKDVVTDMEGKMKGGKAGDVYMVFEYMDADLEGIMKTPDV--QLNRNYIKSFMHQLLCGLDFMHRHKVIHRDLKGANLLINANGCLKIGDFGLARSMHEHMKQLTSKVITLWYRPPELLMRATLYGTDVDMWSVGCIFGEMLQRVAILPGKDEQEQMELIFGLCGTPTPESWPGVAKLPDWESCWKPKVVQRPRERTLQHRFRHLDRNVVDLLDRLLQLDPAKRITATQALDHNYFFDHPAVVAPGGLPPLSFTSCHEFEAKQRQ 349
[Close]
BLAST of mRNA_S-dermatodea_contig11125.735.1 vs. uniprot
Match: A0A2V3IP24_9FLOR (Cyclin-dependent kinase C-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP24_9FLOR)

HSP 1 Score: 287 bits (735), Expect = 3.390e-86
Identity = 148/316 (46.84%), Postives = 207/316 (65.51%), Query Frame = 3 
Query:  435 VYKATRTSDGKLVALKCIKQEDGDGKGFPVTAMREMRILRQLKHKNIVDLIEVIIDGNPTPGRLST----VALVFEYLDHDISGLLDTPEASNQITPALAKSYMLQLIEGVAYMHSKHIIHRDLKGANLLISNAGHLKIADWGLARRLYEMQEKYTTKVITLWYRPPELLLKAALYGPAVDMWSVGCIVAELLTRAAAFPGKSESDQLSLIFDTCGTPTSQTWPGWRELPESDHWKDSVREIPRPSKLREKFARYGEVTLDLLAGLLALDPKRRLTAREAMQHRFFETKPLPSIPGTVTLNLHSCHEYEAKIRKKE 1370
            V+       G++VALK ++  D + +GFPVTA+RE+++LR L+H+NIV+L E++   N    ++      + +VFEY+DHD++GL+DTP      T A  K+Y  QL+ G+ Y H + ++HRD+KG+NLLI N G+LKIAD+GLAR   +  ++YT +VITLWYR PELLL A  YGP VD+WSVGC++ ELLT+   FPGK E +QL LIF   G+PT   WPGW++L  + H   +   +PR   LR+K     +  LDL+  LL LDPKRR TA EA+ H +F +KP P+ P        S HE++AK R+KE
Sbjct:   50 VWMGRDKRSGEIVALKKVRM-DQEKEGFPVTAIRELKMLRSLRHENIVNLKEIVTGQNQNRNKVQRNKHEIYMVFEYVDHDLTGLMDTPTI--HFTEAQVKTYAKQLLSGLWYCHEREVLHRDIKGSNLLIDNKGNLKIADFGLARTFNDHLKRYTNRVITLWYRSPELLLGAEEYGPEVDIWSVGCLLVELLTKKPLFPGKDELEQLDLIFSVLGSPTESIWPGWQQLSLA-HTVKTEAYVPR---LRQKLKSLSQTALDLIEWLLKLDPKRRPTALEALDHEWFWSKPYPT-PREELPKYRSTHEFQAKQRRKE 357
[Close]
BLAST of mRNA_S-dermatodea_contig11125.735.1 vs. uniprot
Match: A0A2V3IYW5_9FLOR (Cyclin-dependent kinase C-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYW5_9FLOR)

HSP 1 Score: 286 bits (731), Expect = 3.500e-85
Identity = 146/324 (45.06%), Postives = 211/324 (65.12%), Query Frame = 3 
Query:  435 VYKATRTSDGKLVALKCIKQEDGDGKGFPVTAMREMRILRQLKHKNIVDLIEVII-----DGNPTPGRLS----TVALVFEYLDHDISGLLDTPEASNQITPALAKSYMLQLIEGVAYMHSKHIIHRDLKGANLLISNAGHLKIADWGLARRLYEMQEKYTTKVITLWYRPPELLLKAALYGPAVDMWSVGCIVAELLTRAAAFPGKSESDQLSLIFDTCGTPTSQTWPGWRELPESDHWKDSVREIPRPSKLREKFARY-----GEVTLDLLAGLLALDPKRRLTAREAMQHRFFETKPLPSIPGTVTLNLHSCHEYEAKIRK 1364
            V+ A      + VALK ++  D + +GFP+TA+RE+++L+ L H+NIV L E++      + N T         ++ +VFEY+DHD++GL+DTP  S + T A  K YM+QL+ G+ Y H + ++HRD+KG+NLLI N G+LKIAD+GLAR   E   KYT +VITLWYRPPELLL A  YGP+VDMWSVGC++AE++TR   FPGK E++QL LIF   GTPT +TWPGWR L ++    +S   +P+  +   K  +Y      +  +D+++ LL LDP +R+TA EA+ HR+F+ +P       +     S HE++AK R+
Sbjct:   43 VWSARDKYTNETVALKRVRM-DNEREGFPLTAIREIKLLKTLHHENIVQLKEIVTGKGCANANDTRDTCKKPKGSIYMVFEYMDHDLTGLMDTP--SIRFTEAHVKCYMMQLLSGLEYCHDRAVLHRDIKGSNLLIDNNGNLKIADFGLARPYGEPGRKYTNRVITLWYRPPELLLGANEYGPSVDMWSVGCLLAEMITRKPLFPGKDEAEQLELIFQVVGTPTERTWPGWRRLAQARMVSESRVHLPQLERYLRKVMKYHGVQGSDALIDIVSKLLTLDPDKRITATEALAHRWFQEEPYACRKDELPKQGVSTHEFQAKRRR 363
[Close]
BLAST of mRNA_S-dermatodea_contig11125.735.1 vs. uniprot
Match: A0A6B2L2W3_9EUKA (Protein kinase domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L2W3_9EUKA)

HSP 1 Score: 282 bits (722), Expect = 3.660e-83
Identity = 153/312 (49.04%), Postives = 209/312 (66.99%), Query Frame = 3 
Query:  498 DGDGKGFPVTAMREMRILRQLKHKNIVDLIEVIIDGNPTPGRLSTVALVFEYLDHDISGLLDTPEASNQITPALAKSYMLQLIEGVAYMHSKHIIHRDLKGANLLISNAGHLKIADWGLARRLYEMQE-KYTTKVITLWYRPPELLLKAALYGPAVDMWSVGCIVAELLT--RAAAFPGKSESDQLSLIFDTCGTPTSQTWPGWRELPESDHWKDSVREIPRPSKLREKFARYGEVTLDLLAGLLALDPKRRLTAREAMQHRFFETKPLPSIPGTVTLNLHSCHEYEAKIRKKEIKRGGK---GSHHGSGGM 1415
            + + +GFP+TA+RE++IL++L H+N++ L+E++I G     +  +V LVFE++DHD++GL+D+  A  QIT    K Y  QL+EG+ Y+H  +I+HRD+K +NLLI+N G LK+AD+GLAR + E ++ KYT KVITLWYRPPELLL A  YG AVDMWS GCI+AELL+  +   F GK+E  QL LIF   GTP+   WP  R LP    WK+   ++   SKLREK     E  LDLL  LL+LDPK+R++A EA+ H++F T+P P  P  +  N  SCHEY  K RK+ +    K   G   GSGG+
Sbjct:    2 ENEKEGFPITAIREIKILKELNHENVIKLLEIVI-GTDEASK-GSVYLVFEFMDHDMAGLMDSA-AGTQITEEQIKCYFKQLLEGLFYLHKNNILHRDIKASNLLINNNGILKLADFGLARPISESEQGKYTNKVITLWYRPPELLLGAEQYGAAVDMWSAGCILAELLSPKKEPLFQGKTEPSQLELIFMMLGTPSDDLWPEGRLLP---WWKNMKPKVQSKSKLREKHPDCSEHALDLLEKLLSLDPKQRMSASEALDHKYFWTEPFPCDPRKIP-NFPSCHEYTTKKRKQRVHEQQKNLSGLGSGSGGV 306
[Close]
BLAST of mRNA_S-dermatodea_contig11125.735.1 vs. uniprot
Match: R1EA98_EMIHU (Protein kinase domain-containing protein n=4 Tax=Eukaryota TaxID=2759 RepID=R1EA98_EMIHU)

HSP 1 Score: 282 bits (722), Expect = 8.150e-83
Identity = 143/308 (46.43%), Postives = 200/308 (64.94%), Query Frame = 3 
Query:  435 VYKATRTSDGKLVALKCIKQEDGDGKGFPVTAMREMRILRQLKHKNIVDLIEVII-DGNPTPGRLSTVALVFEYLDHDISGLLDTPEASNQITPALAKSYMLQLIEGVAYMHSKHIIHRDLKGANLLISNAGHLKIADWGLARRLYEMQEKYTTKVITLWYRPPELLLKAALYGPAVDMWSVGCIVAELLTRAAAFPGKSESDQLSLIFDTCGTPTSQTWPGWRELPESDHWKDSVREIPRPSKLREKFARYGEVTLDLLAGLLALDPKRRLTAREAMQHRFFETKPLPSIPGTVTLNLHSCHEYEAK 1355
            VYKA     G++VALK ++  D + +GFP+TA+RE++IL+ L HKNIV L E++  D +       ++ +V EY DHD++GL D+    ++ +P   K YM QL+EG+ Y H  H++HRD+KG+NLLI+ +G LK+AD+GLAR   +  + YT +VITLWYRPPELLL    YGPA+D+WS GCI+AELL R    PG++E +QL L+F   GTPT Q+WPG  +L   D            S+  +KFA    +  DLL  LLA+DP RR+TA+EA+ H +F T PLP+ P  +     +CHE+ AK
Sbjct:   38 VYKARSRESGEIVALKRVRM-DNEKEGFPITAIREIKILKVLNHKNIVRLHEIVTSDASDYNHGKGSIYMVMEYCDHDLTGLSDS---GHRFSPGQIKCYMKQLLEGICYCHKNHVLHRDIKGSNLLINESGQLKLADFGLARPFDDQSKAYTNRVITLWYRPPELLLGETHYGPAIDLWSAGCILAELLLRKPILPGRNEFEQLDLVFKLLGTPTEQSWPGVSKLAYFDMMTKQNGGRHYMSRFDDKFAALEPMGKDLLRKLLAMDPSRRITAKEALDHDYFWTPPLPTKPEDLP-KYPACHEFTAK 340
[Close]
BLAST of mRNA_S-dermatodea_contig11125.735.1 vs. uniprot
Match: D7G6C6_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6C6_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 1.910e-82
Identity = 145/320 (45.31%), Postives = 209/320 (65.31%), Query Frame = 3 
Query:  435 VYKATRTSDGKLVALKCIKQEDGDGK----GFPVTAMREMRILRQLKHKNIVDLIEVIID--GNPTPGRLSTVALVFEYLDHDISGLLDTPEASNQITPALAKSYMLQLIEGVAYMHSKHIIHRDLKGANLLISNAGHLKIADWGLARRLYEMQEKYTTKVITLWYRPPELLLKAALYGPAVDMWSVGCIVAELLTRAAAFPGKSESDQLSLIFDTCGTPTSQTWPGWRELPESDHWKDSVREIPRPSKLREKFARYGEVTLDLLAGLLALDPKRRLTAREAMQHRFFETKPLPSIPGTVT-LNLHSCHEYEAK-IRKKE 1370
            V+KA       +VALK IK  D +G     GFP+T++RE+RILR L H NIV+L+EV+ D  G    G+   V + FEYL++D+  L ++ +   ++T    K+YM Q+++ +AYMH+  ++HRDLK AN+LI   G LK+ DWGLAR  ++ Q K+T  VITLWYRPPE+LL+   YGPAVDMWSVGCI+AELL  +   PG  E +QL+LI+  CGTPT ++WP   ELP+   + ++  E  +P  ++ KF R+  + +DL+  LL LDP +RL+A EA+ H +F   P    P  ++   +HSCHE+E K +++KE
Sbjct:   52 VWKAKEPGCDIVVALKMIKATDKEGNSCDGGFPITSIREIRILRTLTHDNIVELLEVVTDSHGKVEDGKQGDVYMAFEYLEYDLWALANSSQV--KLTATHIKTYMKQMLDAIAYMHTNKVMHRDLKLANMLIGADGILKVGDWGLARSFHDNQTKHTPTVITLWYRPPEVLLRTTRYGPAVDMWSVGCILAELLYESPILPGTHEKEQLNLIYSLCGTPTDESWPDRTELPDWSLYANAAEEH-KPRSIQSKF-RFDRLGVDLVDKLLTLDPSKRLSAAEALDHPYFWHDPRVVQPSELSKFAIHSCHEFEVKKVKEKE 367
[Close]
BLAST of mRNA_S-dermatodea_contig11125.735.1 vs. uniprot
Match: A0A6T6PG10_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6PG10_9RHOD)

HSP 1 Score: 277 bits (709), Expect = 4.770e-82
Identity = 140/288 (48.61%), Postives = 191/288 (66.32%), Query Frame = 3 
Query:  435 VYKATRTSDGKLVALKCIKQEDGDGKGFPVTAMREMRILRQLKHKNIVDLIEVIIDGNPTPGRLSTVALVFEYLDHDISGLLDTPEASNQITPALAKSYMLQLIEGVAYMHSKHIIHRDLKGANLLISNAGHLKIADWGLARRLYEMQEKYTTKVITLWYRPPELLLKAALYGPAVDMWSVGCIVAELLTRAAAFPGKSESDQLSLIFDTCGTPTSQTWPGWRELPESDHWKDSVREIPRPSKLREKFARYGEVTLDLLAGLLALDPKRRLTAREAMQHRFFETKPLP 1298
            V+KA  T   K+VALK ++  D + +GFP+TA+RE+++L+ L H+NIV L E++ D   +      + +VFEYLDHD++GL+DT E +  +     K  MLQL+ G+ Y H + I+HRD+KG+NLL+S+ G+LKIAD+GLAR   E   +YT KVIT WYRPPELLL A  YGPAVDMWSVGC++AELL R   FPG SE+DQL  I    G+P+   WP +  LP +      +     P +LR+  A  G   LDL+  LLALD  +R++A EA+QHR+F  +PLP
Sbjct:   42 VWKAKDTETNKIVALKKVRM-DNEREGFPLTAIREIKLLKMLNHENIVKLKEIVTDAEDSKNGKVNIYMVFEYLDHDLTGLMDTREVNFSVEQV--KCCMLQLLTGLEYCHKRDILHRDIKGSNLLLSSDGYLKIADFGLARTCGENGRQYTNKVITRWYRPPELLLGANEYGPAVDMWSVGCLLAELLLRTPLFPGSSETDQLDRILKLLGSPSGDIWPAYERLPNAY----LIGHTNYPPRLRQSLAHLGADVLDLIEKLLALDSTKRMSATEALQHRWFRAEPLP 322
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11125.735.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC72_ECTSI3.780e-20175.46CDC2-like protein kinase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2UWV7_9STRA2.560e-9050.00Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A3P3YIJ5_PLABS3.070e-8745.51Protein kinase domain-containing protein n=1 Tax=P... [more]
A0A835YIU7_9STRA4.870e-8746.20Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A2V3IP24_9FLOR3.390e-8646.84Cyclin-dependent kinase C-1 n=1 Tax=Gracilariopsis... [more]
A0A2V3IYW5_9FLOR3.500e-8545.06Cyclin-dependent kinase C-1 n=1 Tax=Gracilariopsis... [more]
A0A6B2L2W3_9EUKA3.660e-8349.04Protein kinase domain-containing protein n=1 Tax=A... [more]
R1EA98_EMIHU8.150e-8346.43Protein kinase domain-containing protein n=4 Tax=E... [more]
D7G6C6_ECTSI1.910e-8245.31Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A6T6PG10_9RHOD4.770e-8248.61Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11125contigS-dermatodea_contig11125:2..4817 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score528.5
Seed ortholog evalue2.8e-147
Seed eggNOG ortholog2880.D8LC72
Preferred nameCDK13
KEGG koko:K00916,ko:K08818,ko:K08819
GOsGO:0000228,GO:0000307,GO:0000375,GO:0000377,GO:0000380,GO:0000398,GO:0000785,GO:0000790,GO:0001067,GO:0001650,GO:0001775,GO:0001932,GO:0002119,GO:0002164,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002520,GO:0002944,GO:0002945,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004672,GO:0004674,GO:0004693,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005700,GO:0005703,GO:0005730,GO:0005737,GO:0005794,GO:0005829,GO:0006139,GO:0006351,GO:0006354,GO:0006355,GO:0006356,GO:0006357,GO:0006366,GO:0006368,GO:0006396,GO:0006397,GO:0006412,GO:0006413,GO:0006417,GO:0006450,GO:0006464,GO:0006468,GO:0006518,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0007088,GO:0007275,GO:0007346,GO:0008023,GO:0008024,GO:0008134,GO:0008150,GO:0008152,GO:0008284,GO:0008353,GO:0008380,GO:0009058,GO:0009059,GO:0009791,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010608,GO:0010628,GO:0010646,GO:0012505,GO:0016070,GO:0016071,GO:0016192,GO:0016301,GO:0016310,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018130,GO:0018193,GO:0018209,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0019908,GO:0023051,GO:0023052,GO:0030097,GO:0030141,GO:0030332,GO:0031123,GO:0031124,GO:0031136,GO:0031137,GO:0031139,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0032268,GO:0032270,GO:0032465,GO:0032501,GO:0032502,GO:0032774,GO:0032784,GO:0032786,GO:0032806,GO:0032940,GO:0032954,GO:0032956,GO:0032970,GO:0032991,GO:0033043,GO:0034248,GO:0034250,GO:0034641,GO:0034645,GO:0034654,GO:0036211,GO:0036230,GO:0042119,GO:0042127,GO:0042325,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0043405,GO:0043408,GO:0043412,GO:0043484,GO:0043549,GO:0043603,GO:0043604,GO:0043900,GO:0043902,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044433,GO:0044444,GO:0044446,GO:0044451,GO:0044452,GO:0044454,GO:0044464,GO:0045055,GO:0045321,GO:0045595,GO:0045596,GO:0045727,GO:0045859,GO:0045893,GO:0045903,GO:0045935,GO:0045943,GO:0045944,GO:0046483,GO:0046777,GO:0046903,GO:0046999,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048731,GO:0048856,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051128,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051302,GO:0051338,GO:0051493,GO:0051726,GO:0051783,GO:0060255,GO:0061695,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070692,GO:0070816,GO:0071619,GO:0071704,GO:0071900,GO:0080090,GO:0090304,GO:0097159,GO:0097472,GO:0097659,GO:0097708,GO:0098687,GO:0099503,GO:0101002,GO:0110020,GO:0140096,GO:1900237,GO:1900406,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902412,GO:1902494,GO:1902531,GO:1902554,GO:1902680,GO:1902911,GO:1903436,GO:1903506,GO:1903508,GO:1904788,GO:1904789,GO:1904813,GO:1990234,GO:2000112,GO:2000241,GO:2000243,GO:2000736,GO:2000737,GO:2001141
EggNOG free text desc.cyclin-dependent protein serine/threonine kinase activity
EggNOG OGsKOG0600@1,KOG0600@2759
EC2.7.11.22,2.7.11.23
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001,ko03021,ko03041
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCDC2-like protein kinase
Ec32 orthologEc-20_004690.1
Exons8
Model size2478
Cds size1218
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11125.735.1prot_S-dermatodea_contig11125.735.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11125 532..4087 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924188.470102-UTR-S-dermatodea_contig11125:1..5311622924188.470102-UTR-S-dermatodea_contig11125:1..531Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11125 2..531 +
1694079078.9377646-UTR-S-dermatodea_contig11125:1..5311694079078.9377646-UTR-S-dermatodea_contig11125:1..531Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11125 2..531 +
1622924188.5579536-UTR-S-dermatodea_contig11125:4087..48171622924188.5579536-UTR-S-dermatodea_contig11125:4087..4817Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11125 4088..4817 +
1694079079.0245395-UTR-S-dermatodea_contig11125:4087..48171694079079.0245395-UTR-S-dermatodea_contig11125:4087..4817Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11125 4088..4817 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924188.478407-CDS-S-dermatodea_contig11125:531..5701622924188.478407-CDS-S-dermatodea_contig11125:531..570Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11125 532..570 +
1694079078.9504566-CDS-S-dermatodea_contig11125:531..5701694079078.9504566-CDS-S-dermatodea_contig11125:531..570Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11125 532..570 +
1622924188.4863415-CDS-S-dermatodea_contig11125:1188..13711622924188.4863415-CDS-S-dermatodea_contig11125:1188..1371Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11125 1189..1371 +
1694079078.9594696-CDS-S-dermatodea_contig11125:1188..13711694079078.9594696-CDS-S-dermatodea_contig11125:1188..1371Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11125 1189..1371 +
1622924188.4980452-CDS-S-dermatodea_contig11125:1777..18511622924188.4980452-CDS-S-dermatodea_contig11125:1777..1851Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11125 1778..1851 +
1694079078.9712663-CDS-S-dermatodea_contig11125:1777..18511694079078.9712663-CDS-S-dermatodea_contig11125:1777..1851Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11125 1778..1851 +
1622924188.5101602-CDS-S-dermatodea_contig11125:2049..21701622924188.5101602-CDS-S-dermatodea_contig11125:2049..2170Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11125 2050..2170 +
1694079078.9809344-CDS-S-dermatodea_contig11125:2049..21701694079078.9809344-CDS-S-dermatodea_contig11125:2049..2170Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11125 2050..2170 +
1622924188.521851-CDS-S-dermatodea_contig11125:2335..25711622924188.521851-CDS-S-dermatodea_contig11125:2335..2571Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11125 2336..2571 +
1694079078.9893458-CDS-S-dermatodea_contig11125:2335..25711694079078.9893458-CDS-S-dermatodea_contig11125:2335..2571Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11125 2336..2571 +
1622924188.531276-CDS-S-dermatodea_contig11125:2725..28541622924188.531276-CDS-S-dermatodea_contig11125:2725..2854Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11125 2726..2854 +
1694079078.998792-CDS-S-dermatodea_contig11125:2725..28541694079078.998792-CDS-S-dermatodea_contig11125:2725..2854Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11125 2726..2854 +
1622924188.5412781-CDS-S-dermatodea_contig11125:3297..33731622924188.5412781-CDS-S-dermatodea_contig11125:3297..3373Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11125 3298..3373 +
1694079079.0066593-CDS-S-dermatodea_contig11125:3297..33731694079079.0066593-CDS-S-dermatodea_contig11125:3297..3373Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11125 3298..3373 +
1622924188.5499096-CDS-S-dermatodea_contig11125:3727..40871622924188.5499096-CDS-S-dermatodea_contig11125:3727..4087Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11125 3728..4087 +
1694079079.015207-CDS-S-dermatodea_contig11125:3727..40871694079079.015207-CDS-S-dermatodea_contig11125:3727..4087Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11125 3728..4087 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11125.735.1

>prot_S-dermatodea_contig11125.735.1 ID=prot_S-dermatodea_contig11125.735.1|Name=mRNA_S-dermatodea_contig11125.735.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=406bp
MREMRILRQLKHKNIVDLIEVIIDGNPTPGRLSTVALVFEYLDHDISGLL
DTPEASNQITPALAKSYMLQLIEGVAYMHSKHIIHRDLKGANLLISNAGH
LKIADWGLARRLYEMQEKYTTKVITLWYRPPELLLKAALYGPAVDMWSVG
CIVAELLTRAAAFPGKSESDQLSLIFDTCGTPTSQTWPGWRELPESDHWK
DSVREIPRPSKLREKFARYGEVTLDLLAGLLALDPKRRLTAREAMQHRFF
ETKPLPSIPGTVTLNLHSCHEYEAKIRKKEIKRGGKGSHHGSGGMFKTKD
NRVSSAVKGASASAAKNQHQQHSHQRGLHQHNGKQPSALQVSLPQAGLRS
HLQQEAAQPHLAHHPINNLVLHATSSGRTPPPLPLPHGQHQPPPSGGRGS
QNWGR*
back to top

mRNA from alignment at S-dermatodea_contig11125:2..4817+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11125.735.1 ID=mRNA_S-dermatodea_contig11125.735.1|Name=mRNA_S-dermatodea_contig11125.735.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4816bp|location=Sequence derived from alignment at S-dermatodea_contig11125:2..4817+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CACAGGTCCTTTCTTGAGCTACGGCCAGGTGCAACGCGGCATGGACATCA
GTATAAGAGTTAGAGCAGGTGGCATGTACAAGTACTAAAATACGGAGACC
GACACGGTTGTCTGTTGTGATGTTATGATACTACGATTACAAAGAAGCTC
CAGTATATCAGCAGTACAGCATTACCATTATACACCCAGTGTACAGTAAG
TAGGCTTTTGAACGTTAACGGGAACACGTGTATGTGCGGGGTCATACCAT
TATCCTATTGTGAACAGCATCTACGTGTAATACTCCTGTCTAGGTTACAT
CGCAATCGCAATATTTCATATTTCCCTGCGCCCACTTCGCAACTCACGCG
TGGGTGTGTTCAGTCCGCCGGTGTCCGCGGTTTGGCCGAATAAGCGGGAA
AATTGGACCTTCCGCGTGTTTATCACGTATTTAGGTGTACAAGGCCACCC
GAACCTCTGACGGCAAGCTGGTGGCCCTCAAGTGCATCAAGCAGGAAGAC
GGCGACGGCAAGGGATTCCCGGTCACTGCCATGAGGGAGATGAGAATATT
GCGGCAGCTCAAACACAAGGTGCGGAGTTGGATTCACGAGCATGCATGCC
GTATCCCTGCTGCACGAAATAGCAGAGTGTGGAGTTACCGTACCACGGAT
ATATGGCTCCTACCCTACTCAATAAGTTGGTGGGTTTTGCGTCAGTAAAT
AACAATTCTGCAATGTAATATTACTCTACCCCTGCTATCACAAATCTCTA
TAAACGAAGAGAGTTATTTGTGTGACCCAGCATGCGAGAGTACTTCCCGA
GACCGCGTGCGCCCCTGGGACCACCAGCTGCTTTCCCTCTGGTAGGAGCT
CGTGGAGTACCTCTCGCAGTGGAGCAGCTAAAGCAGGATTAAATACATCC
TGCGTATGTAGCTTGAAACGTCAACCGACCTGACAAACGACTTGCTTGTT
CTGAGGACGACCGCCGCGAAGAAAATCACCTTCGCTTGATGTTGTTTTTT
TGCGGATCTGAACACAGGTTTTCCGTAAGAGCCTGGGCCATGCAGCACTC
ACCCTCCTGCTGCAGCAGGCAGACCTCGTTTCCTCGAAAGCACTCAAATT
CGGTCCACTCTAATAGTAGCCTGACGCTTTCGTCATGCCATCGTCTCGTG
CTCGCGACGTAAACGAAACAAATACCACTTTTGCCAGAACATCGTGGACC
TCATAGAGGTCATCATCGACGGAAACCCAACACCGGGACGCCTGTCCACG
GTGGCGCTGGTGTTCGAGTACCTGGATCACGACATAAGCGGGCTCCTTGA
TACCCCAGAGGCGTCGAATCAAATCACGCCGGCCCTCGCCAAGTCCTACA
TGCTTCAGCTGATCGAAGGGGTAAGCTTCGAAGGGAAGATCACTCTGGCG
TACGATACAAGCGTGGGCAACGTTGATTTGCGAGATTGGGACCCGAGCAG
AGAGGGCAGCGGCGGCGTTGTCTTGCGCGGTGGAGAGCAATACATAAGGC
GATACATTCGAACCGCGGCTGTTTTTAGATCGCACGCATTGGGGGCATGT
GACTCGAAGGAGCAAGAAAATCGGTGGATTTCACCTTCGCTCAGCATGTC
ATCGGCTATGTATCGAATTCGGCTATGATGCCCCCACCTCCGGGTGGAGG
CTACGTTTCTTCCGCATGTTGTCGACCGTGGCCCCTCGTCGTCGTCGCGG
GTCTTGGCCGGAATGCTCCCGGGATCTATTGCGTCCGCTAATGCGGGATT
CCCGCCTTTAAAATCGCTTTGCGCAGGTGGCGTACATGCACAGCAAGCAT
ATCATACACCGCGACCTCAAGGGCGCAAATCTGCTCATCTCCAACGCAGG
GTGAGACGCCAATGTTCCCTGTACCCATGGCGCCCACCACGCATGTTTGT
CGGTCTAGATTGGTGCACAGGCACGACTGCGTGCTAGCTTTAGGTGCCGC
TTTCGAGTCTTGGTGCTTGCCTGGCGGCAACGCTTCGTTGTGGCGGTGCT
ACTACTGTACACACTCTCAAAATTGGAACCGCTTTCTTGTTGTCGCAGCC
ACCTGAAGATCGCGGACTGGGGGCTAGCCCGGCGCCTGTACGAGATGCAG
GAGAAGTACACTACCAAGGTCATCACGCTTTGGTACCGACCGCCGGAGCT
TCTCCTCAAGGCGGCTTTGGTAAGTCTCCGGCGTCGATCTTCTCATGGCT
GACGGCACTCGCTTATCGCTGCGTCCTGAACATGCACTTGTATGCATGCA
CTTTCCGAGAGATTTTGCACGCGACTCTCCTCCTTGCTGATCCGACAACG
AACCTGATGTCCCCAACACCATTACCGGTGGCAGTACGGACCGGCGGTGG
ACATGTGGTCGGTGGGATGCATCGTGGCGGAGCTTTTGACGAGGGCAGCG
GCGTTCCCGGGGAAGTCTGAGTCTGATCAACTCAGCCTCATCTTCGACAC
CTGCGGCACGCCCACATCTCAGACGTGGCCTGGGTGGCGAGAGCTGCCAG
AGTCTGATCACTGGAAAGATTCCGTGAGGGAGATCCCTCGCCCCTCCAAG
CTGCGTGAGAAGTTTGCAAGGTGAGCAGACGCTTTTTTTTTGTTACCTGT
ACGTACGATGGGTACCAAACAGGATTTGCTCGAGCTTGACGTGTAGCACA
ACAGCAGTGTGCGGTATGTGCTTGAAGGTATTTTTACTCTGCTCATCGTG
TTATCATGTCGCTTTGACGCGCAGGTACGGCGAAGTGACGCTGGATCTGC
TGGCGGGCCTGCTTGCGCTGGATCCTAAAAGGCGTTTAACGGCGCGAGAG
GCTATGCAGCACCGCTTTTTCGAAACCAAGCCGCTGCCTTCAATACCCGG
GACGTGAGTCGATCGTGCAACGCCTCTTAGGGAGTGTTGTTGTCTGTGTT
GTACCCACAGGCTCGTTTGCTACACATGAAAAACACCGGAACACCACCGC
ATACTTGCATGCGGCCCAAGCAAAATGCGCCGATAAACATGTCTGCGATC
CCTGAGCACCAGCCGAAACGGGCCGCACGCTCTGCTCGCACACTCGTGAG
CGGCGCTATCGGAAGCATAGTATAGGTGGAGGGTCGCGCTCGACTACCAT
GAATGGGCGAGCAGATTTTGTTGAGCCCCATGAGCGAAGAGAGGGGTCCA
ATAGGGCGCTGGGTATCTTCTGTCGTGCTCTGGATATCTGGATGTGCAAT
CCTCGCCGCAACGTTGCTTGTAACGCTCTCCTTTGCTGCTGAACCACTCA
TTTTGCCCCCGCATTTATTTGACGCGAACGATGTTTCGGCTTCTAGGGTG
ACGTTGAACCTGCACTCCTGCCACGAGTACGAGGCCAAGATCCGCAAGAA
GGAGATCAAAAGAGGCGGCAAGGTAGGCAAAACAATGCGTTAGCGGCGGC
GGCCTTTTTTTCCCTGTGGAATCGGCTGCGTTGTCTTGGTCGAATCGTGG
TTCGATCTTTTGGCGCTCTCGCTCAGGTCGAAGAACACGTTTGTGATGTA
TAGTTGGCTGGCACCACGAGATGCACCACTACGACCGTTGCTGAGTTTCC
TTACATTGTAAGCAGTCCGCGTCGCAAAAATATCGATAGGGGTTCACACG
CCCCGCGAAGAAGCGCGCTTGTCTCCAGAGGCCCTTCCTCGCGCGCTGCG
TCCTTCCCCCCACCGATACGCTGATTTACGATCTTTGTCCGGCCGCGCGC
GCGTTTTCCGTCCGTACGCTCACCAGGGGAGCCATCACGGCTCGGGCGGG
ATGTTCAAGACGAAGGACAACCGCGTCTCGTCCGCTGTCAAGGGCGCTTC
CGCATCAGCTGCTAAGAATCAGCACCAGCAGCACTCGCACCAGCGAGGGC
TGCACCAGCACAACGGCAAGCAGCCGTCCGCCTTGCAGGTATCACTTCCT
CAGGCGGGGTTGCGATCCCACCTTCAGCAAGAAGCCGCCCAACCCCACCT
CGCTCACCACCCCATTAACAACCTCGTCCTGCACGCCACGAGCTCGGGCC
GAACACCACCGCCGCTGCCGTTGCCGCACGGGCAGCACCAGCCACCACCC
TCGGGAGGCAGGGGTTCGCAGAACTGGGGGCGATGACGGGCTGTCAACAT
CTATTGATAGTGTAGGTCGATAGGCGCCGGTGGTTTTCAAGCCTGTGGCG
TGTGCATGCCCGGCCAAGACGACGGAGCTGCCTTTCAGGGTTCCGGTAGT
GCGTCACCGGCTGTCAGGGTGGCTGTATGTTGTGTGGAGGTCAAAGGCAT
CAATTCGTGGAGTTCCAAGAGTTATTGATTGAGGGTAATGTGGGTTCACG
GCTTGCACTCCGTGGTGGTTACAGTAGAGGGCCTGTGAGCGAGATTCGCT
CGCCGCCGGATTGTTGTTGGAAAAGTCATCGTGGTATGTAGGTATGAAGT
TGGATGGTAAATCTAGTCTATGGTGAGCTAAATATTTTCCCTCTCCCGAT
GAGTTATGGATTGTACACTTTTTGTATTCTGTTTCTTTAAAAATTTTATA
TTATTTTTGTCTTGCGCAGCAACGTATGGCGGACCCGGCCCCCGTCGACG
CAAAAAGTAACCCTCCCGAGAATCTCGTTTTGTGCCGTTTTGTGTCCCTG
TCCCCCATTGACTGGCTGGCATGTGTTTTTCATCGGCTTCAATAAGACTG
CTGAATTCGCGCATGTGGTTTCAAATCATTCATCATTATGAAGGCGGTAT
TTCTCGTTGTCCATCGAAAAAGAGAGGAGTGCACCACGTCTGCACCAACA
AAAAGTTATCTTGTTCGGAAATAGTAACGGTCCGTTTCCAGCAAAATACT
GAGAGACAAAACAAGC
back to top

Coding sequence (CDS) from alignment at S-dermatodea_contig11125:2..4817+

>mRNA_S-dermatodea_contig11125.735.1 ID=mRNA_S-dermatodea_contig11125.735.1|Name=mRNA_S-dermatodea_contig11125.735.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2436bp|location=Sequence derived from alignment at S-dermatodea_contig11125:2..4817+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAGGGAGATGAGAATATTGCGGCAGCTCAAACACAAGATGAGGGAGAT
GAGAATATTGCGGCAGCTCAAACACAAGAACATCGTGGACCTCATAGAGG
TCATCATCGACGGAAACCCAACACCGGGACGCCTGTCCACGGTGGCGCTG
GTGTTCGAGTACCTGGATCACGACATAAGCGGGCTCCTTGATACCCCAGA
GGCGTCGAATCAAATCACGCCGGCCCTCGCCAAGTCCTACATGCTTCAGC
TGATCGAAGGGAACATCGTGGACCTCATAGAGGTCATCATCGACGGAAAC
CCAACACCGGGACGCCTGTCCACGGTGGCGCTGGTGTTCGAGTACCTGGA
TCACGACATAAGCGGGCTCCTTGATACCCCAGAGGCGTCGAATCAAATCA
CGCCGGCCCTCGCCAAGTCCTACATGCTTCAGCTGATCGAAGGGGTGGCG
TACATGCACAGCAAGCATATCATACACCGCGACCTCAAGGGCGCAAATCT
GCTCATCTCCAACGCAGGGTGGCGTACATGCACAGCAAGCATATCATACA
CCGCGACCTCAAGGGCGCAAATCTGCTCATCTCCAACGCAGGCCACCTGA
AGATCGCGGACTGGGGGCTAGCCCGGCGCCTGTACGAGATGCAGGAGAAG
TACACTACCAAGGTCATCACGCTTTGGTACCGACCGCCGGAGCTTCTCCT
CAAGGCGGCTTTGCCACCTGAAGATCGCGGACTGGGGGCTAGCCCGGCGC
CTGTACGAGATGCAGGAGAAGTACACTACCAAGGTCATCACGCTTTGGTA
CCGACCGCCGGAGCTTCTCCTCAAGGCGGCTTTGTACGGACCGGCGGTGG
ACATGTGGTCGGTGGGATGCATCGTGGCGGAGCTTTTGACGAGGGCAGCG
GCGTTCCCGGGGAAGTCTGAGTCTGATCAACTCAGCCTCATCTTCGACAC
CTGCGGCACGCCCACATCTCAGACGTGGCCTGGGTGGCGAGAGCTGCCAG
AGTCTGATCACTGGAAAGATTCCGTGAGGGAGATCCCTCGCCCCTCCAAG
CTGCGTGAGAAGTTTGCAAGTACGGACCGGCGGTGGACATGTGGTCGGTG
GGATGCATCGTGGCGGAGCTTTTGACGAGGGCAGCGGCGTTCCCGGGGAA
GTCTGAGTCTGATCAACTCAGCCTCATCTTCGACACCTGCGGCACGCCCA
CATCTCAGACGTGGCCTGGGTGGCGAGAGCTGCCAGAGTCTGATCACTGG
AAAGATTCCGTGAGGGAGATCCCTCGCCCCTCCAAGCTGCGTGAGAAGTT
TGCAAGGTACGGCGAAGTGACGCTGGATCTGCTGGCGGGCCTGCTTGCGC
TGGATCCTAAAAGGCGTTTAACGGCGCGAGAGGCTATGCAGCACCGCTTT
TTCGAAACCAAGCCGCTGCCTTCAATACCCGGGACGTACGGCGAAGTGAC
GCTGGATCTGCTGGCGGGCCTGCTTGCGCTGGATCCTAAAAGGCGTTTAA
CGGCGCGAGAGGCTATGCAGCACCGCTTTTTCGAAACCAAGCCGCTGCCT
TCAATACCCGGGACGGTGACGTTGAACCTGCACTCCTGCCACGAGTACGA
GGCCAAGATCCGCAAGAAGGAGATCAAAAGAGGCGGCAAGGGTGACGTTG
AACCTGCACTCCTGCCACGAGTACGAGGCCAAGATCCGCAAGAAGGAGAT
CAAAAGAGGCGGCAAGGGGAGCCATCACGGCTCGGGCGGGATGTTCAAGA
CGAAGGACAACCGCGTCTCGTCCGCTGTCAAGGGCGCTTCCGCATCAGCT
GCTAAGAATCAGCACCAGCAGCACTCGCACCAGCGAGGGCTGCACCAGCA
CAACGGCAAGCAGCCGTCCGCCTTGCAGGTATCACTTCCTCAGGCGGGGT
TGCGATCCCACCTTCAGCAAGAAGCCGCCCAACCCCACCTCGCTCACCAC
CCCATTAACAACCTCGTCCTGCACGCCACGAGCTCGGGCCGAACACCACC
GCCGCTGCCGTTGCCGCACGGGCAGCACCAGCCACCACCCTCGGGAGGCA
GGGGTTCGCAGAACTGGGGGCGATGAGGGAGCCATCACGGCTCGGGCGGG
ATGTTCAAGACGAAGGACAACCGCGTCTCGTCCGCTGTCAAGGGCGCTTC
CGCATCAGCTGCTAAGAATCAGCACCAGCAGCACTCGCACCAGCGAGGGC
TGCACCAGCACAACGGCAAGCAGCCGTCCGCCTTGCAGGTATCACTTCCT
CAGGCGGGGTTGCGATCCCACCTTCAGCAAGAAGCCGCCCAACCCCACCT
CGCTCACCACCCCATTAACAACCTCGTCCTGCACGCCACGAGCTCGGGCC
GAACACCACCGCCGCTGCCGTTGCCGCACGGGCAGCACCAGCCACCACCC
TCGGGAGGCAGGGGTTCGCAGAACTGGGGGCGATGA
back to top