mRNA_S-dermatodea_contig11069.697.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11069.697.1
Unique NamemRNA_S-dermatodea_contig11069.697.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig11069.697.1 vs. uniprot
Match: D8LFV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFV3_ECTSI)

HSP 1 Score: 541 bits (1395), Expect = 3.750e-185
Identity = 269/336 (80.06%), Postives = 305/336 (90.77%), Query Frame = 1
Query:   28 LQVDKDVAVAKEHFGLAAPYNAMSPLVLYKGYTKDFLDGKIDPQQQAKLVQDGFEELIQTNDFVVVEGTGHTGVGSVVGMNNADVATLLGLNVLLVGNGGLGSTYDVLSLNKTLCNARGVKVAAVLLNKVKPEKADMVRSYISKALKAYSWDAPILGVVPWADTLDQPSVLDLEQMFDTTALAGREHLLRRFSRFELVTTSLRRLLDKLGDGDIYNTSTCFVTHATRSDVILGLLSHSQDTLNEKNSAAPFDAGLVLTGTPPGHLPHSFVTDYISGAAIPVLTVGMSTTKAMHKLEGFTSKMSVSDSVRTQNVIDHYEPFIDFDELLSCASVPPRP 1035
            L+VDKDVAVAKE+FGL+APYNAMSPLVLYKGYTKDFLDGK+D ++Q +++QDGFEELI++NDFVVVEGTGHTGVGSVVGMNNADVA LLGL+VLLVGNGGLGSTYDV++LNKTLC A GV+V AVLLNKVK  K DMVR YI KAL+  SWDAP+LGVVPWA++LDQPS+LDLEQMF TTAL+GREHLLRR+SRFELVTTSLR+LL KLG G I    TCFVTHATR+D+ILGLLSHSQDTL EKN+A PFDAGL+LTGTPPGH+PHSFV++YI  AAIPVL+VGMST++ MHKLE FTSKM+V D +RT+NVIDHYEP IDFD LLSCASVPPRP
Sbjct:   73 LKVDKDVAVAKEYFGLSAPYNAMSPLVLYKGYTKDFLDGKMDVREQKRVIQDGFEELIRSNDFVVVEGTGHTGVGSVVGMNNADVAGLLGLDVLLVGNGGLGSTYDVMALNKTLCTAGGVRVRAVLLNKVKRGKEDMVREYIGKALRTNSWDAPVLGVVPWAESLDQPSILDLEQMFGTTALSGREHLLRRYSRFELVTTSLRQLLKKLGAGGISAKPTCFVTHATRNDIILGLLSHSQDTLGEKNNA-PFDAGLILTGTPPGHVPHSFVSEYIGRAAIPVLSVGMSTSEVMHKLEKFTSKMNVKDDLRTRNVIDHYEPEIDFDALLSCASVPPRP 407          
BLAST of mRNA_S-dermatodea_contig11069.697.1 vs. uniprot
Match: A0A6H5JE31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE31_9PHAE)

HSP 1 Score: 488 bits (1256), Expect = 6.710e-164
Identity = 246/334 (73.65%), Postives = 281/334 (84.13%), Query Frame = 1
Query:   34 VDKDVAVAKEHFGLAAPYNAMSPLVLYKGYTKDFLDGKIDPQQQAKLVQDGFEELIQTNDFVVVEGTGHTGVGSVVGMNNADVATLLGLNVLLVGNGGLGSTYDVLSLNKTLCNARGVKVAAVLLNKVKPEKADMVRSYISKALKAYSWDAPILGVVPWADTLDQPSVLDLEQMFDTTALAGREHLLRRFSRFELVTTSLRRLLDKLGDGDIYNTSTCFVTHATRSDVILGLLSHSQDTLNEKNSAAPFDAGLVLTGTPPGHLPHSFVTDYISGAAIPVLTVGMSTTKAMHKLEGFTSKMSVSDSVRTQNVIDHYEPFIDFDELLSCASVPPRP 1035
            VDKDVAV +E+FGL+APYNAMSPLVLYKGYTKDFLDGK+D ++Q +++QDGFEELI++NDFVVVEGTGHTGVGSVVGMNNA+VA LLGL+VLLVGNGGLGSTYDV++LNKTLC A GV+V AVLLNKVK  K DMVR YI KAL+   WDAP+LGVVPWA++LDQPS+LDLEQMF TTAL+GREHLLRR+SRFELVTTSLR+LL KLG G I    TCFVTHATRSD+ILGL                     +LTGTPPGH+PHSFV++YI  AAIPVL+V MST++ MHKLE FTSKM+V D +RT+NVIDHYEP IDFD LLSCASVPPRP
Sbjct:  113 VDKDVAVVREYFGLSAPYNAMSPLVLYKGYTKDFLDGKMDVREQKRVIQDGFEELIRSNDFVVVEGTGHTGVGSVVGMNNANVAGLLGLDVLLVGNGGLGSTYDVMALNKTLCTAGGVRVRAVLLNKVKRGKEDMVREYIGKALRTNLWDAPVLGVVPWAESLDQPSILDLEQMFGTTALSGREHLLRRYSRFELVTTSLRQLLKKLGGGGISAKRTCFVTHATRSDIILGL---------------------ILTGTPPGHVPHSFVSEYIGRAAIPVLSVAMSTSEVMHKLEKFTSKMNVKDDLRTRNVIDHYEPEIDFDALLSCASVPPRP 425          
BLAST of mRNA_S-dermatodea_contig11069.697.1 vs. uniprot
Match: A0A836C8E0_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8E0_9STRA)

HSP 1 Score: 331 bits (848), Expect = 6.380e-103
Identity = 169/335 (50.45%), Postives = 233/335 (69.55%), Query Frame = 1
Query:   28 LQVDKDVAVAKEHFGLAAPYNAMSPLVLYKGYTKDFLDGKIDPQQQAKLVQDGFEELIQTNDFVVVEGTGHTGVGSVVGMNNADVATLLGLNVLLVGNGGLGSTYDVLSLNKTLCNARGVKVAAVLLNKVKPEKADMVRSYISKALKAYSWDAPILGVVPWADTLDQPSVLDLEQMFDTTALAGREHL-------LRRFSRFELVTTSLRRLLDKLGDGDIYNTSTCFVTHATRSDVILGLLSHSQDTLNEKNSAAPFDAGLVLTGTPPGHLPHSFVTDYISGAAIPVLTVGMSTTKAMHKLEGFTSKMSVSDSVRTQNVIDHYEPFIDFDELLS 1011
            LQVDKDV VA+EH+GL   Y  MSPLVL KGYT+ +LDG++D  +Q   +Q  F+ ++     V+VEGTGHTGVGS+VG NNADVA +LG+ V+LV NGGLGSTYD L LN+ +C ++GV V+ V++NK   +K    R  +S AL+   W  P++G VP AD+LD PSV DLE +F   AL     L       LRRF+RFELVT +LR  +D L D  +  + TCFVTHA+R D+ILGLLSH+ +   + + A PF  GL+LTG+PPG++P +++ +YI  + +PVL+VG+STT+A+ ++EGFT KM+ +D+ RT  V+ HY P +D + LL+
Sbjct:   52 LQVDKDVKVAREHWGLTCNYRDMSPLVLDKGYTRRYLDGQVDISKQFAAIQQAFDNMLSQKQVVIVEGTGHTGVGSIVGCNNADVAAVLGIGVVLVANGGLGSTYDELELNRQMCMSKGVPVSGVIINKASSDKLAATRKNLSLALRP--WGVPLIGAVPSADSLDVPSVNDLETLFGVRALNADALLRGRGGGALRRFTRFELVTAALRSFMDHLNDPAVDCSQTCFVTHASRHDIILGLLSHAAEASADAD-ARPFQGGLMLTGSPPGNIPDNYMLEYIRDSDMPVLSVGLSTTQALARMEGFTPKMNAADTERTAAVVRHYAPHLDVEALLT 383          
BLAST of mRNA_S-dermatodea_contig11069.697.1 vs. uniprot
Match: A0A6U4F5V9_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4F5V9_9STRA)

HSP 1 Score: 318 bits (816), Expect = 3.840e-98
Identity = 168/344 (48.84%), Postives = 230/344 (66.86%), Query Frame = 1
Query:   28 LQVDKDVAVAKEHFGLAAPYNAMSPLVLYKGYTKDFLDGKI----DPQQQAKLVQDGFEELIQTNDFVVVEGTGHTGVGSVVGMNNADVATLLGLNVLLVGNGGLGSTYDVLSLNKTLCNARGVKVAAVLLNKVKPEKADMVRSYISKALKAYSWDAPILGVVPWADTLDQPSVLDLEQMFDTTALAGREHLLRRFSRFELVTTSLRRLLDKL---GDGDIYNTSTCFVTHATRSDVILGLLSHSQDTLNEKNSAAPFDAGLVLTGTPPGHLPHSFVTDYISGAAIPVLTVGMSTTKAMHKLEGFTSKMSVSDSVRTQNVIDHYEPFIDFDELLSCASVPPRPP 1038
            L+VDKDVA+A+EHF +   Y  MSP+++ +G T+DFLDGK     DP    +L +  F +     DF+VVEGTGH GVGS++G NNA VA  LG++V+LV NGGLGST+D L+LN+  C   GV +A V++NKV+  + +  R+Y+ KA+  + W+AP+LG VP+ D LDQPS +DLE +F+T  + G +H LRRF R+ELVTTSLRR ++KL   GD DI NT  CFVTHA+R+D+ILGLLSH     +  +    F+ GL+LTG+PP + P  F +DYI  A IP+L V  ST+  M  ++ +T K+S +D VRT  VI+ Y P ID   +L   +   R P
Sbjct:   77 LRVDKDVALAREHFNMQMDYLDMSPIIIERGSTRDFLDGKRTEWEDPVITNRL-RTAFAKNCAETDFLVVEGTGHCGVGSILGWNNARVAKALGIDVVLVANGGLGSTFDQLNLNRMACLVEGVDLAGVIVNKVRIGEEEKTRTYLEKAMNKFKWNAPLLGCVPYGDNLDQPSAMDLETLFETKLIGGFQHRLRRFDRYELVTTSLRRFMEKLAKEGD-DILNT--CFVTHASRNDIILGLLSHVSRLDSGLSGGKRFEGGLILTGSPPFNQPADFCSDYIHHANIPILNVPQSTSNTMDAIKSYTPKLSAADDVRTTRVIEQYSPHIDVARMLGLPATDARSP 416          
BLAST of mRNA_S-dermatodea_contig11069.697.1 vs. uniprot
Match: A0A067CJP5_SAPPC (DRTGG domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CJP5_SAPPC)

HSP 1 Score: 292 bits (748), Expect = 9.380e-89
Identity = 156/337 (46.29%), Postives = 215/337 (63.80%), Query Frame = 1
Query:    1 RQRLLLSNTLQVDKDVAVAKEHFGLA-APYNAMSPLVLYKGYTKDFLDGKIDPQQQAKLVQDGFEELIQTNDFVVVEGTGHTGVGSVVGMNNADVATLLGLNVLLVGNGGLGSTYDVLSLNKTLCNARGVKVAAVLLNKVKPEKADMVRSYISKALKAYSWDAPILGVVPWADTLDQPSVLDLEQMFDTTALAGREHLLRRFSRFELVTTSLRRLLDKLGDGDIYNTSTCFVTHATRSDVILGLLSHSQDTLNEKNSAAPFDAGLVLTGTPPGHLPHSFVTDYISGAAIPVLTVGMSTTKAMHKLEGFTSKMSVSDSVRTQNVIDHYEPFIDFDELL 1008
            +Q +L+S  L+VD+DV VAKE F L    Y  MSP+V+  GYT+++LDGKI  + Q + +   F  +   NDF VVEGTGHTGVGS+V +NNA VA  LGL+++L+ NGG+GS +D L+LN+ +C   GVK+  V+LNKV+ +K DM+  Y  KALK   WD P+LGVVP    L QPS+LD E++F T  L+G    + +F    LVT+ LRR L KL   +  +T   FVTHA+R+D+ILG LSHSQ+   E  +   F  GL+LTG PP   P  ++ + IS +  PVL   ++T +AM  + GFT+K + +D  +      HYE F+ FD LL
Sbjct:   43 QQSVLVSGNLRVDRDVRVAKEVFNLKNCDYADMSPVVIPSGYTREYLDGKISLESQLEKISSSFNRIAARNDFTVVEGTGHTGVGSIVNVNNARVAAELGLDMILIANGGIGSAFDDLALNRVMCKEYGVKICGVILNKVRADKMDMMWDYFPKALK--QWDVPLLGVVPDLPRLAQPSMLDFEELFGTKLLSGSNRRMTQFRNISLVTSGLRRFLVKLSSHEFNDT--LFVTHASRNDIILGFLSHSQNY--ELKTGREFGGGLILTGRPPVDQPQDYIMEIISRSTSPVLYAPLTTYRAMDLMTGFTAKFNATDVGKVLTCAKHYENFVKFDTLL 373          
BLAST of mRNA_S-dermatodea_contig11069.697.1 vs. uniprot
Match: A0A024TU32_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024TU32_9STRA)

HSP 1 Score: 291 bits (744), Expect = 4.250e-88
Identity = 156/337 (46.29%), Postives = 214/337 (63.50%), Query Frame = 1
Query:    1 RQRLLLSNTLQVDKDVAVAKEHFGLA-APYNAMSPLVLYKGYTKDFLDGKIDPQQQAKLVQDGFEELIQTNDFVVVEGTGHTGVGSVVGMNNADVATLLGLNVLLVGNGGLGSTYDVLSLNKTLCNARGVKVAAVLLNKVKPEKADMVRSYISKALKAYSWDAPILGVVPWADTLDQPSVLDLEQMFDTTALAGREHLLRRFSRFELVTTSLRRLLDKLGDGDIYNTSTCFVTHATRSDVILGLLSHSQDTLNEKNSAAPFDAGLVLTGTPPGHLPHSFVTDYISGAAIPVLTVGMSTTKAMHKLEGFTSKMSVSDSVRTQNVIDHYEPFIDFDELL 1008
            +Q +++ N ++VDKDV VAKE FGL    Y  MSP+V+  GYT+DFLDGKI  + Q   ++  F+ +   NDF VVEGTGHTGVGS+V +NNA VA  LG++++L+ NGG+GS +D LSLN+ LC   GV+V  V+LNKV+P K DM+  Y  KAL+   W  P+LGVVP    L Q S++D E +F TT L+G    +++++   LVT+ LRR L +L      +T   FV HA+R+D+ILG LSHSQ+   E  +   F  GL+LTG PP   P  +  D IS A +PVL    +T  AM  +  FT+K + +D  +  +   HYE  IDFD+LL
Sbjct:   45 QQSVIVENNIRVDKDVRVAKEIFGLTRCDYADMSPVVIPPGYTRDFLDGKITLESQLSKIRSSFDRITSQNDFTVVEGTGHTGVGSIVNVNNARVAAELGVDMVLIANGGIGSAFDDLSLNRALCQQYGVRVRGVILNKVRPNKVDMMWDYFPKALQ--EWGIPLLGVVPDLPRLAQHSMMDFEHLFKTTLLSGHSRRMKQYNAVNLVTSGLRRFLVELSSNQFNDT--LFVAHASRNDIILGFLSHSQNY--ELKTGQEFGGGLILTGLPPKDQPQDYTMDIISRANLPVLYAPYTTFDAMDMMGNFTAKFNATDVTKVLSCAKHYEQCIDFDKLL 375          
BLAST of mRNA_S-dermatodea_contig11069.697.1 vs. uniprot
Match: A0A8K1FHZ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHZ1_PYTOL)

HSP 1 Score: 288 bits (737), Expect = 4.420e-87
Identity = 156/334 (46.71%), Postives = 216/334 (64.67%), Query Frame = 1
Query:   10 LLLSNTLQVDKDVAVAKEHFGLA-APYNAMSPLVLYKGYTKDFLDGKIDPQQQAKLVQDGFEELIQTNDFVVVEGTGHTGVGSVVGMNNADVATLLGLNVLLVGNGGLGSTYDVLSLNKTLCNARGVKVAAVLLNKVKPEKADMVRSYISKALKAYSWDAPILGVVPWADTLDQPSVLDLEQMFDTTALAGREHLLRRFSRFELVTTSLRRLLDKLGDGDIYNTSTCFVTHATRSDVILGLLSHSQDTLNEKNSAAPFDAGLVLTGTPPGHLPHSFVTDYISGAAIPVLTVGMSTTKAMHKLEGFTSKMSVSDSVRTQNVIDHYEPFIDFDELL 1008
            L+ + TL+VDKDVAVAKE F L    Y  MSP+V+  GYT+ FLDGKI  + Q   ++  FE +   ND+ +VEGTGHTGVGS+V ++NA VA  LG++++L+ NGG+GS +D L+LN  LC   GVKV  V+LNKV+P+K DMV+ Y  KALK   WD P++G+VP    L   S+LD E +F+T  L+  E   +++    LVT+ LRR L KL   + YN  T FVTHA+R+D+ILG LSHSQ+   E  +  PF+ GL+LTG PP   P  ++ D I GA  PVL   ++T +AM ++  FT+K + +D  +     +HY   +DFD +L
Sbjct:   49 LVENGTLRVDKDVAVAKEIFHLTECQYADMSPVVIPPGYTRQFLDGKITLEDQLAKIRQSFERITSKNDYTIVEGTGHTGVGSIVNISNARVAAELGIDMILIANGGIGSAFDDLALNYALCKEHGVKVRGVILNKVRPDKMDMVQEYFPKALK--QWDIPLIGIVPNLPALANCSMLDFEGLFNTKMLSAHERRFQQYKSTTLVTSGLRRFLAKLASNN-YN-DTLFVTHASRNDIILGFLSHSQNY--EARTGQPFNGGLILTGLPPIDQPQEYIMDIIKGANAPVLYAPVTTFEAMERITRFTAKFNPTDRQKVLRCGEHYAQRLDFDVVL 376          
BLAST of mRNA_S-dermatodea_contig11069.697.1 vs. uniprot
Match: A0A7S2S628_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S628_9STRA)

HSP 1 Score: 283 bits (724), Expect = 3.600e-85
Identity = 152/328 (46.34%), Postives = 218/328 (66.46%), Query Frame = 1
Query:   28 LQVDKDVAVAKEHFGL-AAPYNAMSPLVLYKGYTKDFLDGKIDPQQQAKLVQDGFEELIQTNDFVVVEGTGHTGVGSVVGMNNADVATLLGLNVLLVGNGGLGSTYDVLSLNKTLCNARGVKVAAVLLNKVKPEKADMVRSYISKALKAYSWDAPILGVVPWADTLDQPSVLDLEQMFDTTALAGREHLLRRFSRFELVTTSLRRLLDKLGDGDIYNTSTCFVTHATRSDVILGLLSHSQDTLNEKNSAAPFDAGLVLTGTPPGHLPHSFVTDYISGAAIPVLTVGMSTTKAMHKLEGFTSKMSVSDSVRTQNVIDHYEPFIDFDELL 1008
            L+VDKDV + KE+F + +  Y  MSP+V+  GYT+DFLDG I  +QQ + ++  F  + + N+F VVEGTGH GVGS+V ++NA VA+LLGL+++L+ NGGLGS +D L+LN+ +C    V++  V++NKVKP K  MV  Y  KALK   WD P+LGVVP A+ L  P++ D EQ+FDT  ++G+ + LR F++  LV  +L R LD+L      ++ T FVTH++RSD++LG +SH Q  ++E+    P++AGL+L G  P H     +   +     PVL V MST  AM +L  +T+K+S  DS RT   I+HYEPFI+F+ LL
Sbjct:   53 LRVDKDVKLFKEYFNIDSCEYVDMSPVVIPSGYTRDFLDGLITEEQQVESIKSAFANIDRQNEFTVVEGTGHCGVGSIVNLDNARVASLLGLDMVLIVNGGLGSAFDELALNRLMCKQHDVRIRGVIVNKVKPNKLGMVGEYFEKALKR--WDIPLLGVVPDAEYLSSPTMCDFEQLFDTELISGKANRLRHFNQTSLVAMNLGRYLDRLHLEK--HSKTLFVTHSSRSDIVLGFISHGQ--IHEEKWGDPWNAGLILAGEVPLHAISDSLHKILENQNSPVLHVKMSTYDAMLQLTHYTAKLSALDSSRTTAAIEHYEPFINFEALL 374          
BLAST of mRNA_S-dermatodea_contig11069.697.1 vs. uniprot
Match: A0A6G0WNF0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WNF0_9STRA)

HSP 1 Score: 283 bits (723), Expect = 4.470e-85
Identity = 152/337 (45.10%), Postives = 216/337 (64.09%), Query Frame = 1
Query:    1 RQRLLLSNTLQVDKDVAVAKEHFGLA-APYNAMSPLVLYKGYTKDFLDGKIDPQQQAKLVQDGFEELIQTNDFVVVEGTGHTGVGSVVGMNNADVATLLGLNVLLVGNGGLGSTYDVLSLNKTLCNARGVKVAAVLLNKVKPEKADMVRSYISKALKAYSWDAPILGVVPWADTLDQPSVLDLEQMFDTTALAGREHLLRRFSRFELVTTSLRRLLDKLGDGDIYNTSTCFVTHATRSDVILGLLSHSQDTLNEKNSAAPFDAGLVLTGTPPGHLPHSFVTDYISGAAIPVLTVGMSTTKAMHKLEGFTSKMSVSDSVRTQNVIDHYEPFIDFDELL 1008
            +Q +L+   L+VDKDV VAKE FGL+   Y  MSP+V+  GYT+D+LDGKI  + Q   +   F+ + + N+F VVEGTGHTGVGS+V ++NA VA  LG++++L+ NGG+GST+D LSLN+ +C   GV++  V+LNKV+P+K DM+  Y  KALK   WD P+LGVVP    L Q S++D E +F T  L+G    ++++    LVT+ LRR L +L   +  +T   FV HA+R+D+ILG LSHSQ+   E  +   F  GL+LTG PP   P  ++ D IS   +PVL    +T +AM  +  FT+K + +D  +  +   HYE  I+FD LL
Sbjct:   42 QQSVLVDGNLRVDKDVRVAKEVFGLSRCDYADMSPVVIPPGYTRDYLDGKITLESQLDKIHKSFKRISERNEFTVVEGTGHTGVGSIVNVSNARVAADLGVDMVLIANGGIGSTFDDLSLNRAMCKEYGVRIRGVILNKVRPDKVDMMWDYFPKALK--QWDIPLLGVVPDLPLLAQHSMMDYEDLFHTELLSGHARRMQQYKSVNLVTSGLRRFLVELSSNEFNDT--LFVAHASRNDIILGFLSHSQNF--ELKTGQEFGGGLILTGLPPKDQPQEYMMDIISRTHLPVLYAPYTTFEAMDMMGSFTAKFNATDVNKVLSCAKHYEQCINFDALL 372          
BLAST of mRNA_S-dermatodea_contig11069.697.1 vs. uniprot
Match: A0A2D4CEQ2_PYTIN (DRTGG domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CEQ2_PYTIN)

HSP 1 Score: 282 bits (722), Expect = 6.660e-85
Identity = 154/334 (46.11%), Postives = 218/334 (65.27%), Query Frame = 1
Query:   10 LLLSNTLQVDKDVAVAKEHFGL-AAPYNAMSPLVLYKGYTKDFLDGKIDPQQQAKLVQDGFEELIQTNDFVVVEGTGHTGVGSVVGMNNADVATLLGLNVLLVGNGGLGSTYDVLSLNKTLCNARGVKVAAVLLNKVKPEKADMVRSYISKALKAYSWDAPILGVVPWADTLDQPSVLDLEQMFDTTALAGREHLLRRFSRFELVTTSLRRLLDKLGDGDIYNTSTCFVTHATRSDVILGLLSHSQDTLNEKNSAAPFDAGLVLTGTPPGHLPHSFVTDYISGAAIPVLTVGMSTTKAMHKLEGFTSKMSVSDSVRTQNVIDHYEPFIDFDELL 1008
            L+  N+L+VDKDVAVAKE F L    Y  MSP+V+  GYT+DFLDGKI  + Q + ++  FE +   ND+ +VEGTGHTGVGS+V +NNA +A  LG++++L+ NGG+GS +D L+LN ++C   GVKV  V+LNKV P+K DM+  Y  KALK   W+ P++GVVP    L   S+LD E +F T  L+G +   ++++   LVT+ LRR L KL     YN  T FVTHA+R+D+ILG LSH+Q+   E  +   F+ GL+LTG PP   P  ++ + IS A +PVL   ++T +AM K+  +TSK + SD  +     +HY  +I+FD +L
Sbjct:   47 LVEDNSLRVDKDVAVAKEIFHLNECHYADMSPVVIPPGYTRDFLDGKITLESQLQKIRQSFERITSLNDYTIVEGTGHTGVGSIVDINNARIAAELGVDMILIANGGIGSAFDDLALNHSMCKEYGVKVRGVILNKVLPDKVDMMWEYFPKALK--QWNIPLIGVVPNLPALANCSMLDFEGLFHTRLLSGADRRFQQYNSTSLVTSGLRRFLVKLSSNQ-YN-DTLFVTHASRNDIILGFLSHAQNY--EARTKQRFNGGLILTGVPPVDQPQDYIMEIISTANVPVLYAPVTTFEAMTKITRYTSKFNPSDRQKVLRCGEHYAKYINFDVVL 374          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11069.697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFV3_ECTSI3.750e-18580.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JE31_9PHAE6.710e-16473.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C8E0_9STRA6.380e-10350.45AAA domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6U4F5V9_9STRA3.840e-9848.84Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A067CJP5_SAPPC9.380e-8946.29DRTGG domain-containing protein n=4 Tax=Saprolegni... [more]
A0A024TU32_9STRA4.250e-8846.29Uncharacterized protein n=6 Tax=Aphanomyces TaxID=... [more]
A0A8K1FHZ1_PYTOL4.420e-8746.71Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2S628_9STRA3.600e-8546.34Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A6G0WNF0_9STRA4.470e-8545.10Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A2D4CEQ2_PYTIN6.660e-8546.11DRTGG domain-containing protein n=2 Tax=Pythium in... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11069contigS-dermatodea_contig11069:126..7251 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score506.1
Seed ortholog evalue1.2e-140
Seed eggNOG ortholog2880.D8LFV3
EggNOG free text desc.AAA domain
EggNOG OGs2RN67@2759,COG0857@1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDRTGG
Ec32 orthologEc-05_005400.1
Exons12
Model size2197
Cds size954
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11069.697.1prot_S-dermatodea_contig11069.697.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11069 219..3362 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924185.6754-UTR-S-dermatodea_contig11069:125..2181622924185.6754-UTR-S-dermatodea_contig11069:125..218Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11069 126..218 +
1694079076.9217815-UTR-S-dermatodea_contig11069:125..2181694079076.9217815-UTR-S-dermatodea_contig11069:125..218Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11069 126..218 +
1622924185.7742126-UTR-S-dermatodea_contig11069:3362..40181622924185.7742126-UTR-S-dermatodea_contig11069:3362..4018Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11069 3363..4018 +
1694079077.0005286-UTR-S-dermatodea_contig11069:3362..40181694079077.0005286-UTR-S-dermatodea_contig11069:3362..4018Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11069 3363..4018 +
1622924185.784921-UTR-S-dermatodea_contig11069:4240..43071622924185.784921-UTR-S-dermatodea_contig11069:4240..4307Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11069 4241..4307 +
1694079077.0104342-UTR-S-dermatodea_contig11069:4240..43071694079077.0104342-UTR-S-dermatodea_contig11069:4240..4307Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11069 4241..4307 +
1622924185.7998176-UTR-S-dermatodea_contig11069:6177..63041622924185.7998176-UTR-S-dermatodea_contig11069:6177..6304Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11069 6178..6304 +
1694079077.0199034-UTR-S-dermatodea_contig11069:6177..63041694079077.0199034-UTR-S-dermatodea_contig11069:6177..6304Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11069 6178..6304 +
1622924185.8135867-UTR-S-dermatodea_contig11069:6951..72511622924185.8135867-UTR-S-dermatodea_contig11069:6951..7251Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11069 6952..7251 +
1694079077.0293527-UTR-S-dermatodea_contig11069:6951..72511694079077.0293527-UTR-S-dermatodea_contig11069:6951..7251Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11069 6952..7251 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924185.6844566-CDS-S-dermatodea_contig11069:218..2721622924185.6844566-CDS-S-dermatodea_contig11069:218..272Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11069 219..272 +
1694079076.931755-CDS-S-dermatodea_contig11069:218..2721694079076.931755-CDS-S-dermatodea_contig11069:218..272Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11069 219..272 +
1622924185.692568-CDS-S-dermatodea_contig11069:454..5511622924185.692568-CDS-S-dermatodea_contig11069:454..551Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11069 455..551 +
1694079076.9396453-CDS-S-dermatodea_contig11069:454..5511694079076.9396453-CDS-S-dermatodea_contig11069:454..551Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11069 455..551 +
1622924185.7021043-CDS-S-dermatodea_contig11069:963..11331622924185.7021043-CDS-S-dermatodea_contig11069:963..1133Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11069 964..1133 +
1694079076.947158-CDS-S-dermatodea_contig11069:963..11331694079076.947158-CDS-S-dermatodea_contig11069:963..1133Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11069 964..1133 +
1622924185.7118766-CDS-S-dermatodea_contig11069:1422..14891622924185.7118766-CDS-S-dermatodea_contig11069:1422..1489Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11069 1423..1489 +
1694079076.954423-CDS-S-dermatodea_contig11069:1422..14891694079076.954423-CDS-S-dermatodea_contig11069:1422..1489Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11069 1423..1489 +
1622924185.721427-CDS-S-dermatodea_contig11069:1664..17821622924185.721427-CDS-S-dermatodea_contig11069:1664..1782Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11069 1665..1782 +
1694079076.9615786-CDS-S-dermatodea_contig11069:1664..17821694079076.9615786-CDS-S-dermatodea_contig11069:1664..1782Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11069 1665..1782 +
1622924185.731621-CDS-S-dermatodea_contig11069:2149..22741622924185.731621-CDS-S-dermatodea_contig11069:2149..2274Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11069 2150..2274 +
1694079076.9686773-CDS-S-dermatodea_contig11069:2149..22741694079076.9686773-CDS-S-dermatodea_contig11069:2149..2274Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11069 2150..2274 +
1622924185.741455-CDS-S-dermatodea_contig11069:2595..26731622924185.741455-CDS-S-dermatodea_contig11069:2595..2673Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11069 2596..2673 +
1694079076.9764931-CDS-S-dermatodea_contig11069:2595..26731694079076.9764931-CDS-S-dermatodea_contig11069:2595..2673Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11069 2596..2673 +
1622924185.7502637-CDS-S-dermatodea_contig11069:2964..30591622924185.7502637-CDS-S-dermatodea_contig11069:2964..3059Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11069 2965..3059 +
1694079076.9842927-CDS-S-dermatodea_contig11069:2964..30591694079076.9842927-CDS-S-dermatodea_contig11069:2964..3059Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11069 2965..3059 +
1622924185.7603977-CDS-S-dermatodea_contig11069:3212..33621622924185.7603977-CDS-S-dermatodea_contig11069:3212..3362Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11069 3213..3362 +
1694079076.991848-CDS-S-dermatodea_contig11069:3212..33621694079076.991848-CDS-S-dermatodea_contig11069:3212..3362Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11069 3213..3362 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11069.697.1

>prot_S-dermatodea_contig11069.697.1 ID=prot_S-dermatodea_contig11069.697.1|Name=mRNA_S-dermatodea_contig11069.697.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=318bp
MSPLVLYKGYTKDFLDGKIDPQQQAKLVQDGFEELIQTNDFVVVEGTGHT
GVGSVVGMNNADVATLLGLNVLLVGNGGLGSTYDVLSLNKTLCNARGVKV
AAVLLNKVKPEKADMVRSYISKALKAYSWDAPILGVVPWADTLDQPSVLD
LEQMFDTTALAGREHLLRRFSRFELVTTSLRRLLDKLGDGDIYNTSTCFV
THATRSDVILGLLSHSQDTLNEKNSAAPFDAGLVLTGTPPGHLPHSFVTD
YISGAAIPVLTVGMSTTKAMHKLEGFTSKMSVSDSVRTQNVIDHYEPFID
FDELLSCASVPPRPPGQ*
back to top

mRNA from alignment at S-dermatodea_contig11069:126..7251+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11069.697.1 ID=mRNA_S-dermatodea_contig11069.697.1|Name=mRNA_S-dermatodea_contig11069.697.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7126bp|location=Sequence derived from alignment at S-dermatodea_contig11069:126..7251+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CGTCAACGGCTGCTTTTATCGAACACCTTGCAGGTGGACAAGGACGTTGC GGTCGCTAAGGAACACTTCGGACTCGCGGCGCCGTACAATGCCATGAGCC CTCTTGTGCTCTATAAGGGTTACACAAAGGACTTTCTCGACGGCAAGGTG CGCAGCGTGCGGCTAAAACTGCGCTGGCCTCGGTGCTGAAGTAGTGCAGA GCCGTTCCATCGTTCGCCGGGAAGCCTTCACGTCTGACGGTTCCTGAGCT CTCGGGGCACCCTGATTTAGCTCTTCGTTTGATACGCAGCGAATATTTCC TCCCTTTTCTCGGTTTTGTTTTGTCTCAGATTGATCCTCAACAACAAGCG AAGCTAGTGCAAGATGGTTTCGAGGAGCTCATCCAAACGAACGACTTTGT TGTGGTGGAAGGCACCGGGCACACCGGTGAGTCTCTTGAAGCTGGAGTGT TGTGAGGGGTGGAGTTGCTGGATCACACGATGAATATATGGGTAATTCCG TAGGATTTTTTCTCGATCTCTCGATTTTTCTCATCTAACCACGAGCGGGA TCGGCAACCATTGGTGGCCCGGTCGGTTGTATGTGTGACAATAATATTAA TAAAAATATCAATGGGAGTTGACGCGGAAAAAAAGCGAGCAACGGCGCGA ATGTCGAGCCCGAAGAGACCACTGCAGCCATATTTCCGTTACGATTTCCG CCCCTCGACGGCTCAAGCCCTTTCATTTGGATAGCTGGCACACAAGAGAC CACGCTGCGTTAAATTGTGCACAGATAACTCTCTAATACTTGACGTTTTT AACTCTCCTACGCGATGTTACTTTCCGCCCTCGTCCAGGGGTCGGCAGCG TTGTCGGGATGAACAACGCGGATGTTGCTACCTTGCTGGGGTTAAACGTG CTGCTGGTAGGAAATGGTGGCCTCGGTTCGACGTACGACGTCCTTTCACT GAACAAGACATTGTGCAACGCTAGGGGTGTGAAGGTGGCCGCCGTTCTCC TCAACAAGGTTTGATGGTTTGAACCGCTGAAATGTACGGGGCTCAGTTAC ATATCGTTCCACCGGCGGCAGGGAACGACGGTTGAGGCCATTTTGCGGTC AAGGGGACTGTGGGATGCGCGGCGCCGCCTGCAGGCGCCATATTAATCTA CTATGCAATAATCCCCTATAAAGGCAGCCCCTCGAATGCAGCGTTGTGGG TCCATTCGTCCCGTCCAGTCCGCCTGTGCAGCAGTTTGCTTGTGACGGGT CGTCTCGAGCTATGCTGTAATGTTGATGCCGGTGATGTTGCCCCCAGGTG AAACCAGAGAAGGCAGATATGGTGAGGAGCTACATCAGCAAGGCGCTGAA GGCTTACTCTTGGGGTAAGCTGTGTAAGCATGTATGATACCGGCGTGGGG CGGAGCGGGCGCTGGGAGCTGTTGAAAACGAACTGGCCTTCATCCACTCT TACACCGACTGCTCTTGACTCAAATGATCAGTGGTGATACCTAACATCTG TGCTGGTGTAACACTATGCCCGTCGCCTCGGACCAACAGATGCACCTATA TTGGGCGTGGTGCCCTGGGCGGACACACTAGACCAGCCATCGGTACTGGA TCTTGAGCAAATGTTTGACACGACGGCCCTTGCGGGAAGGGAGCATCTTC TGCGAAGGTGTGGCAAGGCGTTCTTGTCAGAACGTTCCCATGACTCGGGC GTCAGGCACTGGCTGTTTTGCACAACACAACCCGATGGCCGTAATGATCT ATTCATAGGTGGTGCAACTACGCAGCACGTGCCGACGACGGGGCGTGAGA CTGACGACGGGGCGTGACACCGGCGTTGCTTTTGATTACCGTAACACGGA AGAGCGTGTCGTGTGATGTCCAGACCATACTTCCCATGCAGTTGTGTTTC CGGTGTTTTGCAAATATCCTGCTTCATGGCTAACCCCCCTGCCCTGCTTG TACTCCCACGCGGTCGTCTGCGTCTCACTACTCATCGCTTAGTTGCCTCG CGTTCTTTGATTTGCATGAAACAGGTTCAGCAGATTTGAGCTGGTGACGA CTAGCCTTCGAAGGCTGTTGGACAAGCTGGGCGATGGTGATATATACAAC ACTTCGACATGTTTCGTCACGCACGCGACAAGGAGCGACGTGATACTCGG TGAGCGCTTCTTCCGTCATTATTGTTTGTTGTTATCATATCGACTGCAGT CTAAATCCAGCCGTGGTCAACAAGAACAATGATTCACGGGACACAATGGG ACAAGCAGCCGCCAAAAACAAGTACGGACATGCTCGCTACTGTAAACGTG ATGCCCACATAACAAGCCTTAAAATATATGAGTGCATCGTTTTCCTGTGT ACACCGGTTAATCCACTCTCTTCCGACAATTTCTGAACGCAATTCCTGGC GGTGTGGGCCTCTCAACATTTTATTCGTTAATGGCTGAATGTCCGCGCAA ACTCTGTGGGTTGTGCGCAGGGCTGCTGTCTCACTCGCAGGACACCCTGA ACGAAAAGAACAGCGCGGCACCATTCGACGCAGGTCTCGTTTTGACAGGT GAGACGGCTTGAGTACGGCCTCTAATATGGCGGCTGAGGTACGCTGTACG GCGGCCTCCTTTAGTACGTTAATGGTCTGCACTCTCGCGTGAACGATTCG CGCGCTTGCGATCGAGCTTTTGGAATCACAGGCACACTGGTCGGCAGCAA TTGTGTCTTTCACAGCGTGACTTTGTATTTCTACACTGTGGTAATTTGTT ACCGTTTGCTACCGTCTCCCTCGCTTTAACAGCCCACACGTATGCTGTTT TCGTGCCGACGCCTTGACCGTTGACATTCAAACTTGCAGGCACACCTCCG GGGCACCTTCCGCATTCGTTCGTCACGGACTATATCAGCGGTGCCGCGAT ACCGGTGCTGACTGTGGGCATGTCCACCACGAAGGCAAGTCTCTTGTAAT GTTTTGCTTTCTCTAGATACATCTCTTGATGGAAACCTGAGTTTCTGCTT TACTGCGAACTTGACGATCGCGACGTTTGGCTGTGTAGTACCACCCATTT ATTTCGTTTTTCCTGTCACTCTGCTTGCGCAATTCAGGCAATGCACAAAC TGGAGGGTTTCACGAGCAAGATGAGCGTCAGTGACAGCGTGAGGACGCAG AACGTCATTGACCACTACGAGCCGTTCATCGATTTCGATGAGTTGCTCTC CTGTGCGAGTGTTCCGCCCCGCCCGCCAGGACAATGATAGGGAGCTCTCC TTATGGATCGTATGCAAATCAGGCGATTTTCGAGGCGTCGAGACTGTCGT CACAGGAGAACTGCCCGCCTTAGGCGGGCTTGTTGGTACCTTATACAGCA GTATTGCAGTCGCCCCCGTCCATCGCGTGTGGTTTCAGAGCTCCAAATAG GCAGTATATAGTTTTAGTGCCAAATAACCTTTCGATAGACGTAACATATA TTGCCAACTTGAAGTCGCGGAACACCACACGCAAAGCACACCACATACCT CAATGTGTGAAGGTTGACAACGTTACACCGACAGGGGTACACATAGTGGG AGGATGTGTCGTCTCTTGTAGCGCAACTCTTTTCAGGAGGAATCGTCCTT ATCTCCCGCTGGTCGCCACCTGCCTTTACCCCAAGCACCAGGTCCCGCCA CATTTGCCCCCCCTTCTTCTCCGTACAAGCTATCCACCATTTTTTGGAGC TCTTCTTGGCTGTACTGTGGCGCGCCAAATATCATGCCAGGGTTGCTTCT GCCTGCATCGTCATCGACCGCGAGGTCTCCCAGCCCAAGCGACCCTATAC CTCCCTCCCCCCCTTCCGACCACGGCAAGTTTTCAAAATCGTCCTCATCC CCGCCAGAGGAATACTCGTTATCGGAGTAGTAGTCGTACGCGTCTGTTTT GGCAGGCAAGATGGTCGCGGGTTGCGGCGAATTGAAAAGGCGCTCTGTAC GGTCGGGTTTGCAAAAAAAGGCGAATGTAATTCGACTCACGCAAAATGGT CCGCTCGAAATGTGGAAGGTCTCGTCGGGGCAATAGTTTTCGCGCTTAGC GACCGGCTACGCAAGCTACCCTGATATGAGCAAAACAGGATTACTGCTAG ACTGGCAACACGCACCTTGTTCGTCTCCTCGAAGGTCACTTCCGAGACTG GCCTCCAGCATGGCGTCCAGTTGCTCCTGCAGCTGAAAGCGGACAATGCG CAAAGCATAGGGGCAGCAACGCACATGAGAGGGATGCGCCGTGTGCTTAC GACTCACAATCTTGAACATACGGTAGCAAACGAAGCTCTCCCTCACAATT ACCTTCACGTGTTTTTGCCAGCATGGACTCCACATCGACATCGATACCAG GGGCACTCAACAGCAATGCTCGCTCGGTTCATGCACAGCCTGCGACATCT TGGCTGCACCTGCAAACTTGTTGGACGCATCATCTTGCTCAAGCACGTGA TCTATCGGCAGTTCTACACTGTTCGAGTCCAAAGCCACGGGCGCGGGAAA TGTGGTCGACCGCGTTGCTCGGGACGTAAAAAGAGTAAACGATGACAAAC ACAGCCACAACATTTTAGGATGTCTACTACAGCAGTTGATACCACCGCAA TATAGGGTTCTTGGGACTGAGTCCGTTTTCCGGAGCCATCTGCCTGCGCC ATATGCATATTTTCCATCGAACAGCGTCCGATTTGGTGGCTTGCCGTCGC CGTAGTGGCGCCCTGCCGCGCTATAATACGCTGCATGCACAGCAGTGAAT TTGTGAATTTGTGCGTGTACGGGTCACCGCAATAATGCCGGCGTTGTCAC GAGTTTCGGCAAAAAACGGGCTCAGTCCCAAAAGGGTTCAGTCAAACTTT CAACTTTCCCACGTCAGCCCTAAACGTCTTTCCCACGTCAGCCCTAAACG TGACGAAAGGAGACCGGGCGCTCAACGAGCTCAGCATGTAAGCTCACGTG ATTCGCAACCACTCGTCGTGGAAAACACGTGCGCCTGCTGTCCTCGATAT TTTTCGCGGGAATTGTCCCTTTCTCGAGCGCCCTCTCCACCGTCCTACAG TAGCGGTGATATTACCTCGATAGCTCTCCTACATCATCACCCATCAGGGT GTGCCCGTGTACCACGTCGTGAGCCCGGATCGTGCGAGTCCGCACAGTGA ACCTTACGTGGTTTCTATAAAACCAAAATCCAGTTCACATCTACAGTACA TCCCTAACTCACAAGACACCACCACAGTAGTAGTTCCAGGGGAAACCGAA AAGTAGGTACCTGGTACGCCCTATACTCTCTCAGTAACGTATACATGCAA CGAAGGATACGAAAAGTACAGCAGAAGTAAATGAACGAGGATTTATTCTT CGTGCGACAAGAATATCACCCTCCAAATCGTGAGTCATCATGAATCCCCG CCTACATGTACCGCCGGTGAACGAAAATTTCTTGGGGGGGAATCCCACGC GTGATTCTGTATGTACGTGTGCTACAATTTGGGCGGAATAGTTACTTGTA TCAATGTGATGAGTAGAGTCTTGAGGCTGATGACGCTCAGCACAGATACT GTAGACTCAGCAGACGCAGCATAGTACACAAATATCAGCCTACTGCTGAT AGACCGGTGATTTGTCAGTGTGTTTCAGAGAGGTGCACGACTAAGCGAAT ACGACTATAATACTTCATTATTGTATTATTTTTGCACCAGACAAAAATGC AGATTCAGGAAAGTGACGTGCCGGTTAAAAAAAAAAATCGTACAAGTATG GTATCATACTTATACAGCTGTAGTACCCATCATACAAGCATACCAGTAGT ATAGTAGTACTCCTCTATTGTGTGGTTTGACCAGCACAACCATTGTTGCT TGCAGATCACCCGAAAATCATGCGAACACAAAACAAAATGAGCGAATCAA TGTCCGTTCTAAAACACGAAAAATATGTATGACGTGGCGGAGTAGTGCTG AGGTATGATGTACAAATCAATGGTGCATTCAATACATGTACAAGTACATA CAGCAGTATGGCACTTGTAATCACAGAAAACACAGAAGAAACTCATGCGC ACCTGCCGATCAAGCTCTTCGTCCATGCGGCGGGTTTGCTCGTCCTGGCA CTTTTCCAGCTCTGCCATCATCTGGGCATCCAGCTGTCTGTCCAGCTCGT CATAGATTTGACGTGATATTTCCTCGTTGACCTATAATATGGCCATACCA GCCATATACGCACGCGGAAGCAGATACAGGGCTCGGTTTGCCCTGTTGAT GCTGCCGTCTTGGCGAGCATGATCATGATATTTTGATTTCTCCCATCAAA ACCTCGGAAACCGAACCTTGAGGAAGAAGTGCTCTCTTGTGACTCGAAAA ACTTTGAGATTTGTCGGACCCACTTTGCAAATTCCAAAAGCAGTTCAAGC CCCCAAAAATTGACACCTCGTTCTCAAGTGTATAGCTCTGCAGAGTAAAT ATGACCTGTGACATGAATTTTACGGCTATGTAATCATGAAACAGGAGTGT ACACTACGCTACTCTTGTTTATATTTCTACTGTACATGTGTCAACAGAGC TGTACTCGTACAGTAACTCGACACGTATACGGTACAAGTAGCTCTAGAGC TCCATACTGTATAGAGCTATAGACGTAGAATCACTATTAATATTATACTT ATACAAGTGTGTCCTGTGTCCTTGATACTGTGTTCAATAAGTGTCTGACC AGGTGGGCGTAGCGTACCGTACCGTACCGCTCATATTTGTGTAGTGCGTG GCAACGTGACACATGCTGCTGAACATCACAACGCCCTCCTGGGTGAACAT ATGCCTATATCGTATATATATCGTATACCTGGTCGGAGAGTGCTTTCCAA GGGTCATGTTCGTCAGGTTCGCAGTCGTCTCGAGCCGAGCCCGTTCTCGG CGCCGTCACCCGCGCATCGCCGCCATCGCTGCTCCGCTTGCCCTGTCGCC TGTCGCTTCGTGGTGCTGCTGCCACCAGCTTTGAGAGAAGAGCATCAAGG CTTTGAGCGTCGTCCTTTGCTGCACTCATACTGCTGACGGTGGGGATGCT TGCCATTTCAGTACAGCGCTTACTATGTGGCGCGTATGTACATTGCATAT GTACATACAGCGAGTATATAGTAGCG
back to top

Coding sequence (CDS) from alignment at S-dermatodea_contig11069:126..7251+

>mRNA_S-dermatodea_contig11069.697.1 ID=mRNA_S-dermatodea_contig11069.697.1|Name=mRNA_S-dermatodea_contig11069.697.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1908bp|location=Sequence derived from alignment at S-dermatodea_contig11069:126..7251+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAGCCCTCTTGTGCTCTATAAGGGTTACACAAAGGACTTTCTCGACGG
CAAGATGAGCCCTCTTGTGCTCTATAAGGGTTACACAAAGGACTTTCTCG
ACGGCAAGATTGATCCTCAACAACAAGCGAAGCTAGTGCAAGATGGTTTC
GAGGAGCTCATCCAAACGAACGACTTTGTTGTGGTGGAAGGCACCGGGCA
CACCGATTGATCCTCAACAACAAGCGAAGCTAGTGCAAGATGGTTTCGAG
GAGCTCATCCAAACGAACGACTTTGTTGTGGTGGAAGGCACCGGGCACAC
CGGGGTCGGCAGCGTTGTCGGGATGAACAACGCGGATGTTGCTACCTTGC
TGGGGTTAAACGTGCTGCTGGTAGGAAATGGTGGCCTCGGTTCGACGTAC
GACGTCCTTTCACTGAACAAGACATTGTGCAACGCTAGGGGTGTGAAGGT
GGCCGCCGTTCTCCTCAACAAGGGGTCGGCAGCGTTGTCGGGATGAACAA
CGCGGATGTTGCTACCTTGCTGGGGTTAAACGTGCTGCTGGTAGGAAATG
GTGGCCTCGGTTCGACGTACGACGTCCTTTCACTGAACAAGACATTGTGC
AACGCTAGGGGTGTGAAGGTGGCCGCCGTTCTCCTCAACAAGGTGAAACC
AGAGAAGGCAGATATGGTGAGGAGCTACATCAGCAAGGCGCTGAAGGCTT
ACTCTTGGGGTGAAACCAGAGAAGGCAGATATGGTGAGGAGCTACATCAG
CAAGGCGCTGAAGGCTTACTCTTGGGATGCACCTATATTGGGCGTGGTGC
CCTGGGCGGACACACTAGACCAGCCATCGGTACTGGATCTTGAGCAAATG
TTTGACACGACGGCCCTTGCGGGAAGGGAGCATCTTCTGCGAAGATGCAC
CTATATTGGGCGTGGTGCCCTGGGCGGACACACTAGACCAGCCATCGGTA
CTGGATCTTGAGCAAATGTTTGACACGACGGCCCTTGCGGGAAGGGAGCA
TCTTCTGCGAAGGTTCAGCAGATTTGAGCTGGTGACGACTAGCCTTCGAA
GGCTGTTGGACAAGCTGGGCGATGGTGATATATACAACACTTCGACATGT
TTCGTCACGCACGCGACAAGGAGCGACGTGATACTCGGTTCAGCAGATTT
GAGCTGGTGACGACTAGCCTTCGAAGGCTGTTGGACAAGCTGGGCGATGG
TGATATATACAACACTTCGACATGTTTCGTCACGCACGCGACAAGGAGCG
ACGTGATACTCGGGCTGCTGTCTCACTCGCAGGACACCCTGAACGAAAAG
AACAGCGCGGCACCATTCGACGCAGGTCTCGTTTTGACAGGGCTGCTGTC
TCACTCGCAGGACACCCTGAACGAAAAGAACAGCGCGGCACCATTCGACG
CAGGTCTCGTTTTGACAGGCACACCTCCGGGGCACCTTCCGCATTCGTTC
GTCACGGACTATATCAGCGGTGCCGCGATACCGGTGCTGACTGTGGGCAT
GTCCACCACGAAGGCACACCTCCGGGGCACCTTCCGCATTCGTTCGTCAC
GGACTATATCAGCGGTGCCGCGATACCGGTGCTGACTGTGGGCATGTCCA
CCACGAAGGCAATGCACAAACTGGAGGGTTTCACGAGCAAGATGAGCGTC
AGTGACAGCGTGAGGACGCAGAACGTCATTGACCACTACGAGCCGTTCAT
CGATTTCGATGAGTTGCTCTCCTGTGCGAGTGTTCCGCCCCGCCCGCCAG
GACAATGAGCAATGCACAAACTGGAGGGTTTCACGAGCAAGATGAGCGTC
AGTGACAGCGTGAGGACGCAGAACGTCATTGACCACTACGAGCCGTTCAT
CGATTTCGATGAGTTGCTCTCCTGTGCGAGTGTTCCGCCCCGCCCGCCAG
GACAATGA
back to top