mRNA_S-dermatodea_contig11025.681.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11025.681.1
Unique NamemRNA_S-dermatodea_contig11025.681.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig11025.681.1 vs. uniprot
Match: D7FQP2_ECTSI (Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP2_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 4.530e-39
Identity = 107/246 (43.50%), Postives = 140/246 (56.91%), Query Frame = 1
Query:   13 EERTSFLEGSGEVLLKLICRGATSEQWAEWLRAPLEVAAAQGNDELVDKLLKAGADRSAGRRGGNGRTLLHAAAEGGSASLVTAFLDAGAHVDINARTMQTFSAECLAPLYLLAEQTPLHRAAYFGHRDAARALIMAGANVHVRDRNGVSPLDAAIAY-GGNEQLAHDLLLSGAFPDLRDTGSTSKESPLQLAARKGYISLVGSLIRRGADVNAVCRTFGARGTAVHCAAKAGHVSVLKVLWAAGA 747
            E+R   L  + +++ KL+C  ATSEQW EWLRAPLE AA   N +LV+KLLKAGAD SAG RG +  TLLHAA       +VTA + AGA  D+ A+T  T               TPLH A   G   AAR L++AGA+V+  D N  +PL  AI   G + ++A DLLLSGA P  R     + + P+ +AA  G   +V +L    AD++A+    G   T +  A +  HVS +KVL AAGA
Sbjct:    9 EDRVKILGDAADMIFKLMCDRATSEQWTEWLRAPLEHAAGTANRDLVEKLLKAGADGSAGWRGCDDNTLLHAAXXXXXXXVVTALIRAGAGEDMEAKTPGTGG-------------TPLHVAVMRGQEAAARVLVLAGADVNAVDHNTDTPLHLAIGVLGVDARIAQDLLLSGANPKAR---GFAHDCPIHVAASHGRHDVVHALAHTRADLDALD---GKGMTPISLAVEGDHVSTVKVLLAAGA 235          
BLAST of mRNA_S-dermatodea_contig11025.681.1 vs. uniprot
Match: A0A6H5KNQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ1_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 7.360e-37
Identity = 89/214 (41.59%), Postives = 130/214 (60.75%), Query Frame = 1
Query:   10 YEERTSFLEGSGEVLLKLICRGATSEQWAEWLRAPLEVAAAQGNDELVDKLLKAGADRSAGRRGGNGRTLLHAAAEGGSASLVTAFLDAGAHVDINARTMQTFSAECLAPLYLLAEQTPLHRAAYFGHRDAARALIMAGANVHVRDRNGVSPLDAAIAYGGNEQLAHDLLLSGAFPDLRDT---GSTSKESPLQLAARKGYISLVGSLIRRGAD 642
            + ERTS L+G G  + KL+  GA+ EQWAEWLR PLE AA++GN  LV++LL+AGAD  AG RG  GRTLL AAA GG+A +++A +  GA  D+N  T+ +              ++ LH A   GH  AA+ L++ GA+V+ RD      + +    G + QL +DL + GA P++RD    G T+  +   LA R+G++++V +L+  GAD
Sbjct:    4 FPERTS-LDGLGSEVFKLVSYGASREQWAEWLRVPLEHAASRGNPNLVERLLQAGADAGAGWRGCRGRTLLDAAALGGNADVMSALIRGGAGADVNKVTVSS-------------RRSALHTATCCGHEAAAKRLVLTGADVNFRDPVAKCSVLSQAIQGSHTQLVNDLPIGGARPNIRDDCGLGKTTYVTTFMLAVRRGHLAIVETLLEAGAD 203          
BLAST of mRNA_S-dermatodea_contig11025.681.1 vs. uniprot
Match: D7G2A3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A3_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 4.040e-32
Identity = 106/283 (37.46%), Postives = 140/283 (49.47%), Query Frame = 1
Query:    1 MPGYEERTSFLEGSGEVLLKLICRGATSEQWAEWLRAPLEVAAAQGNDELVDKLLKAGADRSAGRRGGNGRTLLHAAAEGGSASLVTAFLDAGAHVDINARTMQTFSAECLAPLYLLAEQTPLHRAAYFGHRDAARALIMAGANVHVRDRNGVSPLDAAI--------------------------------AYGGNEQLAHDLLLSGAFPDLRDTGSTSKESPLQLAARKGYISLVGSLIRRGADVNAVCRTFGARGTAVHCAAKAGHVSVLKVLWAAGAYI 753
            MPGYEER S L+  G+ + KL+C  AT EQWAEWLRAPLE AA  GN +LVDKLL AGA+  AG RG +G+TLLHAAAEGG+  ++T+   AGA  D+ A+++ T               TPL  A   G   AA+ALIMAGA+V+  D      L                                    A+ G +++   L L     DL    S   E+PL+LA R  +++ V  L+  GAD +   R        +H AAK    + +  L+ AG  I
Sbjct:    1 MPGYEERASILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAGRDMKAKSLDT-------------GHTPLDLAVIGGKEAAAKALIMAGADVNTLDATNDGLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWHGLDEVV--LALGEKGVDLNCLNSKG-ETPLRLAVRGDHVTTVKVLLSEGADPH--FRAANRPLKLLHVAAKRNRAAAIPALFEAGVNI 265          
BLAST of mRNA_S-dermatodea_contig11025.681.1 vs. uniprot
Match: D8LHQ7_ECTSI (F-box domain and ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ7_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 2.120e-31
Identity = 96/245 (39.18%), Postives = 124/245 (50.61%), Query Frame = 1
Query:    1 MPGYEERTSFLEGSGEVLLKLICRGATSEQWAEWLRAPLEVAAAQGNDELVDKLLKAGADRSAGRRGGNGRTLLHAAAEGGSASLVTAFLDAGAHVDINARTMQTFSAECLAPLYLLAEQTPLHRAAYFGHRDAARALIMAGANVHVRDRNGVSPLDAAIAYGGNEQLAHDLLLSGAFPDLRDTGSTSKESPLQLAARKGYISLVGSLIRRGADVNAVCRTFGARGTAVHCAAKAG-HVSVLKVL 732
            +PGYEER+S L+  G+   KL+   AT +QWAEWLRAPLE AAA GN +LVDKLL AGA+  AG RG +G+TLLHAAAEGG+  ++T   +AGA  D+ A+ + T               TPL  A   G   AA+ALIMAGANV++ D       D                                       A  G   +V +L+++G D+N V      RG    C A  G HV+ +KVL
Sbjct:   43 IPGYEERSSILQDLGDTTFKLVRDRATPDQWAEWLRAPLEHAAATGNRDLVDKLLGAGANGGAGWRGCHGKTLLHAAAEGGNVQVITRLRNAGAGEDMKAKALDT-------------GHTPLDLAVIGGKEAAAKALIMAGANVNMLDATN----DGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACYGLDEVVLALVQKGVDLNCV----NTRGEIPLCVALRGDHVATIKVL 266          
BLAST of mRNA_S-dermatodea_contig11025.681.1 vs. uniprot
Match: A0A6H5KFY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFY7_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 7.620e-31
Identity = 99/253 (39.13%), Postives = 139/253 (54.94%), Query Frame = 2
Query:  782 PLAQ-AATSNKVNAVHALIDAGARVEGDHPRNMTPLMVAALEGHAFPTCSIRALLSRGANLHATSSELGRSALHCACFGGKLVAADMLLRLGADETALDTNGATPRAVIPAIGESAEEGYRLRLERLATLLTRAPQDRAWRRRGFLVLCRAHPDRIRCGIDRSERAAAVGERDLAKISSSRFSKAGRVE---------------GAGGGVAEGVSGKVDGAEGHGEVDGFDGVAGWMMALQEEGVFRRILGYI 1492
            PLA  AA  N   A+ AL  AG  +EG  P+  TPL  AA  G      ++ ALL  GAN+++ ++  G S L  AC  G   AAD+LLR GADETA+D++  T  +++      A    R RLER++ LL RAPQDRAWRRRGFLV C +HPDR++  ++  E A    E+   +    R ++ G+VE                   G  EG     +G +G     GF+G++ WM+AL EE +FR+I+G++
Sbjct:   94 PLAHIAALHNNAAAMPALFKAGVYIEGRSPKGRTPLQNAAFCGSCE---AMLALLQLGANVNSKNTINGLSPLCSACREGHHDAADLLLRWGADETAVDSDEKTIVSMMTHRIFRAAVASRQRLERVSELLARAPQDRAWRRRGFLVPCLSHPDRVQLAVEIPEAATEAIEQTQER--PRRHARTGQVEVKVEMDGTNXXXXXXXXKSGAREGTESMREGTDG-----GFNGLSAWMIALTEEHLFRKIMGFL 336          
BLAST of mRNA_S-dermatodea_contig11025.681.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 1.360e-28
Identity = 100/253 (39.53%), Postives = 142/253 (56.13%), Query Frame = 1
Query:   19 RTSFLEGSGEVLLKLICRGATSEQWAEWLRAPLEVAAAQGNDELVDKLLKAGADRSAGRRGGNGRTLLHAAAEGGSASLVTAFLDAGAHVDINARTMQTFSAECLAPLYLLAEQTPLHRAAYFGHRDAARALIMAGANVHVRDRNGVSPLDAAIAY-----GGNEQLAHDLLLSGAFPDLRDTGSTSKESPLQLAARKGYISLVGSLIRRG-ADVNAVCRTFGARGTA-VHCAAKAGHVSVLKVLWAAGAYIN 756
            + + LEG+   + KL+  GAT EQWAEWLRAPLE AAA+GN  LV++LL AGA+  AG RG  GRT+L AAA GG+  +V   L +G   D+N              + L + ++ LH A+  GH  AA+ LI+AGA+V     N V P DA ++      G +  L   LL+ GA P+ R   + S  +PL LAA  G   +V +L+     DV+A+     +RG + +  A++ GH S ++ L  AGA +N
Sbjct:    6 KRALLEGAELEIFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNV-------------VSLSSRRSALHVASVCGHEAAAKKLIIAGADV-----NRVDPGDACVSLHVAVEGRHGDLVDLLLIGGACPNSR---TMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDAL----DSRGVSPLMVASEGGHCSTVEALLRAGADMN 233          
BLAST of mRNA_S-dermatodea_contig11025.681.1 vs. uniprot
Match: D7FQP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP1_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 3.110e-28
Identity = 75/148 (50.68%), Postives = 94/148 (63.51%), Query Frame = 1
Query:   13 EERTSFLEGSGEVLLKLICRGATSEQWAEWLRAPLEVAAAQGNDELVDKLLKAGADRSAGRRGGNGRTLLHAAAEGGSASLVTAFLDAGAHVDINARTMQTFSAECLAPLYLLAEQTPLHRAAYFGHRDAARALIMAGANVHVRDRNG 456
            E+R   L  +  ++ KL+C  ATSEQWAEWLRAPLE AA   N +LV+KLLKAGAD SAG RG + +TLLHAAAEGG+  +VTA + AGA  D+ A+ +                 TPLH A   G   AAR L++AGA+V+  DRNG
Sbjct:    9 EDRAKTLGDAAGIIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALVRAGAGEDMEAKVLGIVGG------------TPLHVAVATGKDAAARVLMLAGADVNAADRNG 144          
BLAST of mRNA_S-dermatodea_contig11025.681.1 vs. uniprot
Match: A0A6H5JXY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY4_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 3.460e-28
Identity = 76/153 (49.67%), Postives = 99/153 (64.71%), Query Frame = 1
Query:   13 EERTSFLEGSGEVLLKLICRGATSEQWAEWLRAPLEVAAAQGNDELVDKLLKAGADRSAGRRGGNGRTLLHAAAEGGSAS-LVTAFLDAGAHVDINARTMQTFSAECLAPLYLLAEQTPLHRAAYFGHRDAARALIMAGANVHVRDRNGVSPL 468
            E+R   L  + +++ +L+C  ATSEQWAEWLRAPLE AA   N +LV+KLLKAGA+ SAGRRG +  TLLHAAAEGG+   +VTA + AGA  DI A+ +             +   TPLH A   G   AARA+++AGA+V+  DRNG + L
Sbjct:   11 EDRAKILGDAADMIFELMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGANGSAGRRGCDDNTLLHAAAEGGNEEEVVTALIKAGAEEDIEAKVVG------------MVRGTPLHVAVATGKEAAARAMMLAGADVNAADRNGDTTL 151          
BLAST of mRNA_S-dermatodea_contig11025.681.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 3.990e-28
Identity = 93/234 (39.74%), Postives = 126/234 (53.85%), Query Frame = 1
Query:   52 LLKLICRGATSEQWAEWLRAPLEVAAAQGNDELVDKLLKAGADRSAGRRGGNGRTLLHAAAEGGSASLVTAFLDAGAHVDINARTMQTFSAECLAPLYLLAEQTPLHRAAYFGHRDAARALIMAGANVHVRDR-NGVSPLDAAIAYGGNEQLAHDLLLSGAFPDLRDTGSTSKESPLQLAARKGYISLVGSLIRR-GADVNAVCRTFGARGTAVHCAAKAGHVSVLKVLWAAGA 747
            + K++  GAT EQWA WLRAPLE AAA GN  LVD+LLKAG D  AG RG  GR+LL AAA GG+A +++A L AG   D+N     T              ++ L+++    H  AAR LI+AGA+V+  DR +   PL AA+   G + L  +LL++GA P++    S    +PL  AA++G  +    L+     D N                   GHV+ +KVL AAGA
Sbjct:   15 IFKIVSEGATPEQWARWLRAPLEHAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALGGNAGVMSALLQAGCGPDVNVVASST-------------GRSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFAAVK-AGCDDLVGNLLMAGANPNVIVRHSFGHGTPLHAAAKQGLANTASVLLSSPSTDKN-------------------GHVATVKVLLAAGA 215          
BLAST of mRNA_S-dermatodea_contig11025.681.1 vs. uniprot
Match: A0A6H5JU78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU78_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 6.560e-26
Identity = 98/258 (37.98%), Postives = 133/258 (51.55%), Query Frame = 2
Query:  782 PLAQAATSNKVNAVHALIDAGARVEGDHPRNMTPLMVAALEGHAFPT--CSIRALLSRGANLHA--TSSELGR----------SALHCACFGGKLVAADMLLRLGADETALDTNGATPRAVIPAIGESAEEGYRLRLERLATLLTRAPQDRAWRRRGFLVLCRAHPDRIRCGIDRSERAAAVGERDLAKISSSRFSKAGRVE-----GAGG--GVAEGVSGKVDGAEGHGEVDGFDGVAGWMMALQEEGVFRRILGYI 1492
            P+  AA       V A+++ G  +   + +   PL++A L   A      +IR L   GA++ A  T  +LG           ++L  AC  G   AA +LL  G DE A+D+ G T   ++      A    R  LERL+ LL RAPQDRAWRRRGFLVL R HPDR+R  ++    AA   E+   +    R +  G+VE     G GG  G + GV   ++     G V GF GV+ WMMAL EEGVFRRI+G++
Sbjct:  113 PIHLAACHGLDEVVLAVVEKGIDLNCLNNKREIPLLLALLRIAACENKAAAIRVLFEAGADIEARLTLFQLGAKVNSKENERITSLSSACSFGNHDAAGLLLSWGGDENAMDSEGETVVFMVMQQIAEAPASVRPPLERLSRLLARAPQDRAWRRRGFLVLGRVHPDRVRLAVEIPPAAADATEQPQQR--PRRRASTGQVEVDGTNGGGGXTGASSGVRAGIEAVH-EGTVAGFGGVSAWMMALTEEGVFRRIVGFL 367          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11025.681.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQP2_ECTSI4.530e-3943.50Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5KNQ1_9PHAE7.360e-3741.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2A3_ECTSI4.040e-3237.46Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D8LHQ7_ECTSI2.120e-3139.18F-box domain and ankyrin repeat protein n=1 Tax=Ec... [more]
A0A6H5KFY7_9PHAE7.620e-3139.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1F4_9PHAE1.360e-2839.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQP1_ECTSI3.110e-2850.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXY4_9PHAE3.460e-2849.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXA8_ECTSI3.990e-2839.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JU78_9PHAE6.560e-2637.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11025contigS-dermatodea_contig11025:598..2089 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score153.7
Seed ortholog evalue1.6e-34
Seed eggNOG ortholog2880.D7FQP2
KEGG koko:K21440
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categoryother localisation
Exons1
Model size1492
Cds size1020
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924184.5975676-CDS-S-dermatodea_contig11025:597..16171622924184.5975676-CDS-S-dermatodea_contig11025:597..1617Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11025 598..1617 +
1694079076.1885164-CDS-S-dermatodea_contig11025:597..16171694079076.1885164-CDS-S-dermatodea_contig11025:597..1617Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11025 598..1617 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924184.6066298-UTR-S-dermatodea_contig11025:1617..20891622924184.6066298-UTR-S-dermatodea_contig11025:1617..2089Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11025 1618..2089 +
1694079076.1986063-UTR-S-dermatodea_contig11025:1617..20891694079076.1986063-UTR-S-dermatodea_contig11025:1617..2089Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11025 1618..2089 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11025.681.1prot_S-dermatodea_contig11025.681.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11025 598..1617 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11025.681.1

>prot_S-dermatodea_contig11025.681.1 ID=prot_S-dermatodea_contig11025.681.1|Name=mRNA_S-dermatodea_contig11025.681.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=340bp
MPGYEERTSFLEGSGEVLLKLICRGATSEQWAEWLRAPLEVAAAQGNDEL
VDKLLKAGADRSAGRRGGNGRTLLHAAAEGGSASLVTAFLDAGAHVDINA
RTMQTFSAECLAPLYLLAEQTPLHRAAYFGHRDAARALIMAGANVHVRDR
NGVSPLDAAIAYGGNEQLAHDLLLSGAFPDLRDTGSTSKESPLQLAARKG
YISLVGSLIRRGADVNAVCRTFGARGTAVHCAAKAGHVSVLKVLWAAGAY
INFLGLRYITSLGTGRDEQQGERGPRPHRCRRSRRRRSPQEHDTAHGCRF
GRTRVSDVLHSRSFEQRSKPPRHLLRTWTVRLALCVLRR*
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mRNA from alignment at S-dermatodea_contig11025:598..2089+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11025.681.1 ID=mRNA_S-dermatodea_contig11025.681.1|Name=mRNA_S-dermatodea_contig11025.681.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1492bp|location=Sequence derived from alignment at S-dermatodea_contig11025:598..2089+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCCTGGTTACGAAGAACGGACCAGCTTCCTGGAAGGCTCGGGGGAGGT GCTACTCAAACTTATCTGCAGGGGAGCCACTTCGGAGCAGTGGGCAGAGT GGCTTCGGGCGCCGCTCGAGGTCGCTGCAGCTCAGGGTAACGACGAACTG GTGGACAAGCTGTTGAAGGCCGGGGCGGACAGGAGTGCTGGCAGGAGGGG GGGAAATGGCCGTACTCTGCTGCATGCTGCTGCCGAGGGTGGAAGCGCGT CGCTTGTGACAGCGTTCCTCGACGCAGGAGCGCATGTAGACATCAACGCT AGGACTATGCAGACCTTTAGCGCTGAATGCCTGGCTCCCCTCTATCTATT GGCAGAGCAGACGCCCCTCCATCGCGCGGCATACTTTGGCCACAGAGATG CGGCAAGGGCGCTGATAATGGCTGGGGCAAACGTACATGTGCGTGATAGG AATGGTGTGAGTCCTCTGGACGCTGCCATAGCCTACGGGGGAAACGAGCA GCTCGCCCATGACCTGTTGCTCAGCGGAGCATTCCCAGATCTACGTGATA CAGGTAGTACTTCGAAGGAATCTCCCCTTCAACTTGCTGCTCGAAAGGGG TACATATCGTTGGTGGGCTCGCTGATACGAAGGGGTGCTGACGTAAACGC CGTGTGCCGTACATTCGGTGCACGTGGGACGGCGGTCCATTGCGCAGCCA AGGCCGGCCATGTTTCGGTACTGAAGGTGCTCTGGGCTGCTGGCGCTTAC ATCAACTTCCTTGGATTGCGATACATCACCTCCCTTGGCACAGGCCGCGA CGAGCAACAAGGTGAACGCGGTCCACGCCCTCATCGATGCCGGCGCTCGC GTCGAAGGCGATCACCCCAGGAACATGACACCGCTCATGGTTGCCGCTTT GGAAGGACACGCGTTTCCGACGTGCTCCATTCGCGCTCTTTTGAGCAGAG GAGCAAACCTCCACGCCACCTCCTCCGAACTTGGACGGTCCGCCTTGCAT TGTGCGTGCTTCGGAGGTAAGCTGGTGGCAGCGGATATGTTGCTGAGATT GGGTGCCGACGAGACGGCTCTTGACACCAATGGCGCGACGCCGAGGGCCG TGATACCAGCGATCGGCGAAAGTGCAGAGGAGGGATATCGCCTGCGCCTC GAGCGACTGGCCACGCTACTGACCCGCGCTCCCCAGGACAGGGCGTGGCG TCGCCGGGGCTTTCTGGTGCTGTGCCGTGCTCACCCAGACAGGATTCGGT GCGGGATCGATAGAAGTGAGAGGGCCGCCGCCGTCGGAGAGCGGGACCTG GCGAAGATTTCGAGCAGCCGTTTCAGTAAGGCGGGGAGGGTGGAAGGGGC AGGAGGCGGTGTTGCGGAAGGCGTTTCTGGTAAGGTCGACGGGGCTGAGG GCCACGGTGAGGTCGATGGCTTCGACGGCGTCGCCGGCTGGATGATGGCC CTGCAGGAGGAGGGCGTATTTCGCCGTATCCTTGGATATATC
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Coding sequence (CDS) from alignment at S-dermatodea_contig11025:598..2089+

>mRNA_S-dermatodea_contig11025.681.1 ID=mRNA_S-dermatodea_contig11025.681.1|Name=mRNA_S-dermatodea_contig11025.681.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2040bp|location=Sequence derived from alignment at S-dermatodea_contig11025:598..2089+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCCTGGTTACGAAGAACGGACCAGCTTCCTGGAAGGCTCGGGGGAGGT
GCTACTCAAACTTATCTGCAGGGGAGCCACTTCGGAGCAGTGGGCAGAGT
GGCTTCGGGCGCCGCTCGAGGTCGCTGCAGCTCAGGGTAACGACGAACTG
GTGGACAAGCTGTTGAAGGCCGGGGCGGACAGGAGTGCTGGCAGGAGGGG
GGGAAATGGCCGTACTCTGCTGCATGCTGCTGCCGAGGGTGGAAGCGCGT
CGCTTGTGACAGCGTTCCTCGACGCAGGAGCGCATGTAGACATCAACGCT
AGGACTATGCAGACCTTTAGCGCTGAATGCCTGGCTCCCCTCTATCTATT
GGCAGAGCAGACGCCCCTCCATCGCGCGGCATACTTTGGCCACAGAGATG
CGGCAAGGGCGCTGATAATGGCTGGGGCAAACGTACATGTGCGTGATAGG
AATGGTGTGAGTCCTCTGGACGCTGCCATAGCCTACGGGGGAAACGAGCA
GCTCGCCCATGACCTGTTGCTCAGCGGAGCATTCCCAGATCTACGTGATA
CAGGTAGTACTTCGAAGGAATCTCCCCTTCAACTTGCTGCTCGAAAGGGG
TACATATCGTTGGTGGGCTCGCTGATACGAAGGGGTGCTGACGTAAACGC
CGTGTGCCGTACATTCGGTGCACGTGGGACGGCGGTCCATTGCGCAGCCA
AGGCCGGCCATGTTTCGGTACTGAAGGTGCTCTGGGCTGCTGGCGCTTAC
ATCAACTTCCTTGGATTGCGATACATCACCTCCCTTGGCACAGGCCGCGA
CGAGCAACAAGGTGAACGCGGTCCACGCCCTCATCGATGCCGGCGCTCGC
GTCGAAGGCGATCACCCCAGGAACATGACACCGCTCATGGTTGCCGCTTT
GGAAGGACACGCGTTTCCGACGTGCTCCATTCGCGCTCTTTTGAGCAGAG
GAGCAAACCTCCACGCCACCTCCTCCGAACTTGGACGGTCCGCCTTGCAT
TGTGCGTGCTTCGGAGGTAAATGCCTGGTTACGAAGAACGGACCAGCTTC
CTGGAAGGCTCGGGGGAGGTGCTACTCAAACTTATCTGCAGGGGAGCCAC
TTCGGAGCAGTGGGCAGAGTGGCTTCGGGCGCCGCTCGAGGTCGCTGCAG
CTCAGGGTAACGACGAACTGGTGGACAAGCTGTTGAAGGCCGGGGCGGAC
AGGAGTGCTGGCAGGAGGGGGGGAAATGGCCGTACTCTGCTGCATGCTGC
TGCCGAGGGTGGAAGCGCGTCGCTTGTGACAGCGTTCCTCGACGCAGGAG
CGCATGTAGACATCAACGCTAGGACTATGCAGACCTTTAGCGCTGAATGC
CTGGCTCCCCTCTATCTATTGGCAGAGCAGACGCCCCTCCATCGCGCGGC
ATACTTTGGCCACAGAGATGCGGCAAGGGCGCTGATAATGGCTGGGGCAA
ACGTACATGTGCGTGATAGGAATGGTGTGAGTCCTCTGGACGCTGCCATA
GCCTACGGGGGAAACGAGCAGCTCGCCCATGACCTGTTGCTCAGCGGAGC
ATTCCCAGATCTACGTGATACAGGTAGTACTTCGAAGGAATCTCCCCTTC
AACTTGCTGCTCGAAAGGGGTACATATCGTTGGTGGGCTCGCTGATACGA
AGGGGTGCTGACGTAAACGCCGTGTGCCGTACATTCGGTGCACGTGGGAC
GGCGGTCCATTGCGCAGCCAAGGCCGGCCATGTTTCGGTACTGAAGGTGC
TCTGGGCTGCTGGCGCTTACATCAACTTCCTTGGATTGCGATACATCACC
TCCCTTGGCACAGGCCGCGACGAGCAACAAGGTGAACGCGGTCCACGCCC
TCATCGATGCCGGCGCTCGCGTCGAAGGCGATCACCCCAGGAACATGACA
CCGCTCATGGTTGCCGCTTTGGAAGGACACGCGTTTCCGACGTGCTCCAT
TCGCGCTCTTTTGAGCAGAGGAGCAAACCTCCACGCCACCTCCTCCGAAC
TTGGACGGTCCGCCTTGCATTGTGCGTGCTTCGGAGGTAA
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