mRNA_S-dermatodea_contig11025.681.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11025.681.1 vs. uniprot
Match: D7FQP2_ECTSI (Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP2_ECTSI) HSP 1 Score: 154 bits (388), Expect = 4.530e-39 Identity = 107/246 (43.50%), Postives = 140/246 (56.91%), Query Frame = 1
Query: 13 EERTSFLEGSGEVLLKLICRGATSEQWAEWLRAPLEVAAAQGNDELVDKLLKAGADRSAGRRGGNGRTLLHAAAEGGSASLVTAFLDAGAHVDINARTMQTFSAECLAPLYLLAEQTPLHRAAYFGHRDAARALIMAGANVHVRDRNGVSPLDAAIAY-GGNEQLAHDLLLSGAFPDLRDTGSTSKESPLQLAARKGYISLVGSLIRRGADVNAVCRTFGARGTAVHCAAKAGHVSVLKVLWAAGA 747
E+R L + +++ KL+C ATSEQW EWLRAPLE AA N +LV+KLLKAGAD SAG RG + TLLHAA +VTA + AGA D+ A+T T TPLH A G AAR L++AGA+V+ D N +PL AI G + ++A DLLLSGA P R + + P+ +AA G +V +L AD++A+ G T + A + HVS +KVL AAGA
Sbjct: 9 EDRVKILGDAADMIFKLMCDRATSEQWTEWLRAPLEHAAGTANRDLVEKLLKAGADGSAGWRGCDDNTLLHAAXXXXXXXVVTALIRAGAGEDMEAKTPGTGG-------------TPLHVAVMRGQEAAARVLVLAGADVNAVDHNTDTPLHLAIGVLGVDARIAQDLLLSGANPKAR---GFAHDCPIHVAASHGRHDVVHALAHTRADLDALD---GKGMTPISLAVEGDHVSTVKVLLAAGA 235
BLAST of mRNA_S-dermatodea_contig11025.681.1 vs. uniprot
Match: A0A6H5KNQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ1_9PHAE) HSP 1 Score: 147 bits (372), Expect = 7.360e-37 Identity = 89/214 (41.59%), Postives = 130/214 (60.75%), Query Frame = 1
Query: 10 YEERTSFLEGSGEVLLKLICRGATSEQWAEWLRAPLEVAAAQGNDELVDKLLKAGADRSAGRRGGNGRTLLHAAAEGGSASLVTAFLDAGAHVDINARTMQTFSAECLAPLYLLAEQTPLHRAAYFGHRDAARALIMAGANVHVRDRNGVSPLDAAIAYGGNEQLAHDLLLSGAFPDLRDT---GSTSKESPLQLAARKGYISLVGSLIRRGAD 642
+ ERTS L+G G + KL+ GA+ EQWAEWLR PLE AA++GN LV++LL+AGAD AG RG GRTLL AAA GG+A +++A + GA D+N T+ + ++ LH A GH AA+ L++ GA+V+ RD + + G + QL +DL + GA P++RD G T+ + LA R+G++++V +L+ GAD
Sbjct: 4 FPERTS-LDGLGSEVFKLVSYGASREQWAEWLRVPLEHAASRGNPNLVERLLQAGADAGAGWRGCRGRTLLDAAALGGNADVMSALIRGGAGADVNKVTVSS-------------RRSALHTATCCGHEAAAKRLVLTGADVNFRDPVAKCSVLSQAIQGSHTQLVNDLPIGGARPNIRDDCGLGKTTYVTTFMLAVRRGHLAIVETLLEAGAD 203
BLAST of mRNA_S-dermatodea_contig11025.681.1 vs. uniprot
Match: D7G2A3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A3_ECTSI) HSP 1 Score: 138 bits (348), Expect = 4.040e-32 Identity = 106/283 (37.46%), Postives = 140/283 (49.47%), Query Frame = 1
Query: 1 MPGYEERTSFLEGSGEVLLKLICRGATSEQWAEWLRAPLEVAAAQGNDELVDKLLKAGADRSAGRRGGNGRTLLHAAAEGGSASLVTAFLDAGAHVDINARTMQTFSAECLAPLYLLAEQTPLHRAAYFGHRDAARALIMAGANVHVRDRNGVSPLDAAI--------------------------------AYGGNEQLAHDLLLSGAFPDLRDTGSTSKESPLQLAARKGYISLVGSLIRRGADVNAVCRTFGARGTAVHCAAKAGHVSVLKVLWAAGAYI 753
MPGYEER S L+ G+ + KL+C AT EQWAEWLRAPLE AA GN +LVDKLL AGA+ AG RG +G+TLLHAAAEGG+ ++T+ AGA D+ A+++ T TPL A G AA+ALIMAGA+V+ D L A+ G +++ L L DL S E+PL+LA R +++ V L+ GAD + R +H AAK + + L+ AG I
Sbjct: 1 MPGYEERASILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAGRDMKAKSLDT-------------GHTPLDLAVIGGKEAAAKALIMAGADVNTLDATNDGLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWHGLDEVV--LALGEKGVDLNCLNSKG-ETPLRLAVRGDHVTTVKVLLSEGADPH--FRAANRPLKLLHVAAKRNRAAAIPALFEAGVNI 265
BLAST of mRNA_S-dermatodea_contig11025.681.1 vs. uniprot
Match: D8LHQ7_ECTSI (F-box domain and ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ7_ECTSI) HSP 1 Score: 133 bits (334), Expect = 2.120e-31 Identity = 96/245 (39.18%), Postives = 124/245 (50.61%), Query Frame = 1
Query: 1 MPGYEERTSFLEGSGEVLLKLICRGATSEQWAEWLRAPLEVAAAQGNDELVDKLLKAGADRSAGRRGGNGRTLLHAAAEGGSASLVTAFLDAGAHVDINARTMQTFSAECLAPLYLLAEQTPLHRAAYFGHRDAARALIMAGANVHVRDRNGVSPLDAAIAYGGNEQLAHDLLLSGAFPDLRDTGSTSKESPLQLAARKGYISLVGSLIRRGADVNAVCRTFGARGTAVHCAAKAG-HVSVLKVL 732
+PGYEER+S L+ G+ KL+ AT +QWAEWLRAPLE AAA GN +LVDKLL AGA+ AG RG +G+TLLHAAAEGG+ ++T +AGA D+ A+ + T TPL A G AA+ALIMAGANV++ D D A G +V +L+++G D+N V RG C A G HV+ +KVL
Sbjct: 43 IPGYEERSSILQDLGDTTFKLVRDRATPDQWAEWLRAPLEHAAATGNRDLVDKLLGAGANGGAGWRGCHGKTLLHAAAEGGNVQVITRLRNAGAGEDMKAKALDT-------------GHTPLDLAVIGGKEAAAKALIMAGANVNMLDATN----DGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACYGLDEVVLALVQKGVDLNCV----NTRGEIPLCVALRGDHVATIKVL 266
BLAST of mRNA_S-dermatodea_contig11025.681.1 vs. uniprot
Match: A0A6H5KFY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFY7_9PHAE) HSP 1 Score: 132 bits (331), Expect = 7.620e-31 Identity = 99/253 (39.13%), Postives = 139/253 (54.94%), Query Frame = 2
Query: 782 PLAQ-AATSNKVNAVHALIDAGARVEGDHPRNMTPLMVAALEGHAFPTCSIRALLSRGANLHATSSELGRSALHCACFGGKLVAADMLLRLGADETALDTNGATPRAVIPAIGESAEEGYRLRLERLATLLTRAPQDRAWRRRGFLVLCRAHPDRIRCGIDRSERAAAVGERDLAKISSSRFSKAGRVE---------------GAGGGVAEGVSGKVDGAEGHGEVDGFDGVAGWMMALQEEGVFRRILGYI 1492
PLA AA N A+ AL AG +EG P+ TPL AA G ++ ALL GAN+++ ++ G S L AC G AAD+LLR GADETA+D++ T +++ A R RLER++ LL RAPQDRAWRRRGFLV C +HPDR++ ++ E A E+ + R ++ G+VE G EG +G +G GF+G++ WM+AL EE +FR+I+G++
Sbjct: 94 PLAHIAALHNNAAAMPALFKAGVYIEGRSPKGRTPLQNAAFCGSCE---AMLALLQLGANVNSKNTINGLSPLCSACREGHHDAADLLLRWGADETAVDSDEKTIVSMMTHRIFRAAVASRQRLERVSELLARAPQDRAWRRRGFLVPCLSHPDRVQLAVEIPEAATEAIEQTQER--PRRHARTGQVEVKVEMDGTNXXXXXXXXKSGAREGTESMREGTDG-----GFNGLSAWMIALTEEHLFRKIMGFL 336
BLAST of mRNA_S-dermatodea_contig11025.681.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 129 bits (324), Expect = 1.360e-28 Identity = 100/253 (39.53%), Postives = 142/253 (56.13%), Query Frame = 1
Query: 19 RTSFLEGSGEVLLKLICRGATSEQWAEWLRAPLEVAAAQGNDELVDKLLKAGADRSAGRRGGNGRTLLHAAAEGGSASLVTAFLDAGAHVDINARTMQTFSAECLAPLYLLAEQTPLHRAAYFGHRDAARALIMAGANVHVRDRNGVSPLDAAIAY-----GGNEQLAHDLLLSGAFPDLRDTGSTSKESPLQLAARKGYISLVGSLIRRG-ADVNAVCRTFGARGTA-VHCAAKAGHVSVLKVLWAAGAYIN 756
+ + LEG+ + KL+ GAT EQWAEWLRAPLE AAA+GN LV++LL AGA+ AG RG GRT+L AAA GG+ +V L +G D+N + L + ++ LH A+ GH AA+ LI+AGA+V N V P DA ++ G + L LL+ GA P+ R + S +PL LAA G +V +L+ DV+A+ +RG + + A++ GH S ++ L AGA +N
Sbjct: 6 KRALLEGAELEIFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNV-------------VSLSSRRSALHVASVCGHEAAAKKLIIAGADV-----NRVDPGDACVSLHVAVEGRHGDLVDLLLIGGACPNSR---TMSGRTPLHLAAASGNNRVVSTLLGNAMTDVDAL----DSRGVSPLMVASEGGHCSTVEALLRAGADMN 233
BLAST of mRNA_S-dermatodea_contig11025.681.1 vs. uniprot
Match: D7FQP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP1_ECTSI) HSP 1 Score: 126 bits (316), Expect = 3.110e-28 Identity = 75/148 (50.68%), Postives = 94/148 (63.51%), Query Frame = 1
Query: 13 EERTSFLEGSGEVLLKLICRGATSEQWAEWLRAPLEVAAAQGNDELVDKLLKAGADRSAGRRGGNGRTLLHAAAEGGSASLVTAFLDAGAHVDINARTMQTFSAECLAPLYLLAEQTPLHRAAYFGHRDAARALIMAGANVHVRDRNG 456
E+R L + ++ KL+C ATSEQWAEWLRAPLE AA N +LV+KLLKAGAD SAG RG + +TLLHAAAEGG+ +VTA + AGA D+ A+ + TPLH A G AAR L++AGA+V+ DRNG
Sbjct: 9 EDRAKTLGDAAGIIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALVRAGAGEDMEAKVLGIVGG------------TPLHVAVATGKDAAARVLMLAGADVNAADRNG 144
BLAST of mRNA_S-dermatodea_contig11025.681.1 vs. uniprot
Match: A0A6H5JXY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY4_9PHAE) HSP 1 Score: 127 bits (318), Expect = 3.460e-28 Identity = 76/153 (49.67%), Postives = 99/153 (64.71%), Query Frame = 1
Query: 13 EERTSFLEGSGEVLLKLICRGATSEQWAEWLRAPLEVAAAQGNDELVDKLLKAGADRSAGRRGGNGRTLLHAAAEGGSAS-LVTAFLDAGAHVDINARTMQTFSAECLAPLYLLAEQTPLHRAAYFGHRDAARALIMAGANVHVRDRNGVSPL 468
E+R L + +++ +L+C ATSEQWAEWLRAPLE AA N +LV+KLLKAGA+ SAGRRG + TLLHAAAEGG+ +VTA + AGA DI A+ + + TPLH A G AARA+++AGA+V+ DRNG + L
Sbjct: 11 EDRAKILGDAADMIFELMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGANGSAGRRGCDDNTLLHAAAEGGNEEEVVTALIKAGAEEDIEAKVVG------------MVRGTPLHVAVATGKEAAARAMMLAGADVNAADRNGDTTL 151
BLAST of mRNA_S-dermatodea_contig11025.681.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI) HSP 1 Score: 127 bits (319), Expect = 3.990e-28 Identity = 93/234 (39.74%), Postives = 126/234 (53.85%), Query Frame = 1
Query: 52 LLKLICRGATSEQWAEWLRAPLEVAAAQGNDELVDKLLKAGADRSAGRRGGNGRTLLHAAAEGGSASLVTAFLDAGAHVDINARTMQTFSAECLAPLYLLAEQTPLHRAAYFGHRDAARALIMAGANVHVRDR-NGVSPLDAAIAYGGNEQLAHDLLLSGAFPDLRDTGSTSKESPLQLAARKGYISLVGSLIRR-GADVNAVCRTFGARGTAVHCAAKAGHVSVLKVLWAAGA 747
+ K++ GAT EQWA WLRAPLE AAA GN LVD+LLKAG D AG RG GR+LL AAA GG+A +++A L AG D+N T ++ L+++ H AAR LI+AGA+V+ DR + PL AA+ G + L +LL++GA P++ S +PL AA++G + L+ D N GHV+ +KVL AAGA
Sbjct: 15 IFKIVSEGATPEQWARWLRAPLEHAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALGGNAGVMSALLQAGCGPDVNVVASST-------------GRSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFAAVK-AGCDDLVGNLLMAGANPNVIVRHSFGHGTPLHAAAKQGLANTASVLLSSPSTDKN-------------------GHVATVKVLLAAGA 215
BLAST of mRNA_S-dermatodea_contig11025.681.1 vs. uniprot
Match: A0A6H5JU78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU78_9PHAE) HSP 1 Score: 119 bits (297), Expect = 6.560e-26 Identity = 98/258 (37.98%), Postives = 133/258 (51.55%), Query Frame = 2
Query: 782 PLAQAATSNKVNAVHALIDAGARVEGDHPRNMTPLMVAALEGHAFPT--CSIRALLSRGANLHA--TSSELGR----------SALHCACFGGKLVAADMLLRLGADETALDTNGATPRAVIPAIGESAEEGYRLRLERLATLLTRAPQDRAWRRRGFLVLCRAHPDRIRCGIDRSERAAAVGERDLAKISSSRFSKAGRVE-----GAGG--GVAEGVSGKVDGAEGHGEVDGFDGVAGWMMALQEEGVFRRILGYI 1492
P+ AA V A+++ G + + + PL++A L A +IR L GA++ A T +LG ++L AC G AA +LL G DE A+D+ G T ++ A R LERL+ LL RAPQDRAWRRRGFLVL R HPDR+R ++ AA E+ + R + G+VE G GG G + GV ++ G V GF GV+ WMMAL EEGVFRRI+G++
Sbjct: 113 PIHLAACHGLDEVVLAVVEKGIDLNCLNNKREIPLLLALLRIAACENKAAAIRVLFEAGADIEARLTLFQLGAKVNSKENERITSLSSACSFGNHDAAGLLLSWGGDENAMDSEGETVVFMVMQQIAEAPASVRPPLERLSRLLARAPQDRAWRRRGFLVLGRVHPDRVRLAVEIPPAAADATEQPQQR--PRRRASTGQVEVDGTNGGGGXTGASSGVRAGIEAVH-EGTVAGFGGVSAWMMALTEEGVFRRIVGFL 367 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11025.681.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11025.681.1 >prot_S-dermatodea_contig11025.681.1 ID=prot_S-dermatodea_contig11025.681.1|Name=mRNA_S-dermatodea_contig11025.681.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=340bp MPGYEERTSFLEGSGEVLLKLICRGATSEQWAEWLRAPLEVAAAQGNDELback to top mRNA from alignment at S-dermatodea_contig11025:598..2089+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11025.681.1 ID=mRNA_S-dermatodea_contig11025.681.1|Name=mRNA_S-dermatodea_contig11025.681.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1492bp|location=Sequence derived from alignment at S-dermatodea_contig11025:598..2089+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11025:598..2089+ >mRNA_S-dermatodea_contig11025.681.1 ID=mRNA_S-dermatodea_contig11025.681.1|Name=mRNA_S-dermatodea_contig11025.681.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2040bp|location=Sequence derived from alignment at S-dermatodea_contig11025:598..2089+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |