mRNA_S-dermatodea_contig1101.670.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig1101.670.1 vs. uniprot
Match: A0A2I6U1R2_SACJA (Subtilisin (Fragment) n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1R2_SACJA) HSP 1 Score: 233 bits (594), Expect = 4.970e-68 Identity = 126/217 (58.06%), Postives = 160/217 (73.73%), Query Frame = 2
Query: 5 DCTVDLESMAYDAYMHENPEHLLIFAAGNDGDPEDQERTSCTINLPAIAKNVLAIGATSSGATRWPLTSDDGDLISSYGVDDVADIGTVAYFSSYGLTRDGRIKPELVAPGDQVLSAESDGTEEQSCKVSALAGTSMSTPIVAGAAAMVRQYFRNYTFYAHDVNERGFCSNFTDVNATNAFVCEEFSPAAATVKAMLVNSADLMGGSSEPDGWRGFG 655
+C+V + + YD +M+ NPE+L++ AAGN GD ED RT CT+ PAI KN LA+GATSSG TR TS DGDLI G + AD+ TVA FSSYG T+DGRIKPE+VAPGD + SA SDG++ SC++SA +GTSM+ PIVAGA+AMVRQYF + +FY D RG+ + + CE FSP++ATVKA+L+NSA+LMGGSSEPDG+RGFG
Sbjct: 559 ECSVCEKDVLYDDFMYNNPENLVVVAAGNAGDTEDG-RTVCTMYSPAIGKNALAVGATSSGETRITKTSADGDLID--GTNGYADVDTVAQFSSYGPTQDGRIKPEVVAPGDAIYSARSDGSDNHSCRLSAKSGTSMACPIVAGASAMVRQYFMDESFYVADQAARGWSDD-------SGRRCESFSPSSATVKALLINSANLMGGSSEPDGYRGFG 765
BLAST of mRNA_S-dermatodea_contig1101.670.1 vs. uniprot
Match: A0A6H5K365_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K365_9PHAE) HSP 1 Score: 226 bits (577), Expect = 1.950e-66 Identity = 126/217 (58.06%), Postives = 154/217 (70.97%), Query Frame = 2
Query: 5 DCTVDLESMAYDAYMHENPEHLLIFAAGNDGDPEDQERTSCTINLPAIAKNVLAIGATSSGATRWPLTSDDGDLISSYGVDDVADIGTVAYFSSYGLTRDGRIKPELVAPGDQVLSAESDGTEEQSCKVSALAGTSMSTPIVAGAAAMVRQYFRNYTFYAHDVNERGFCSNFTDVNATNAFVCEEFSPAAATVKAMLVNSADLMGGSSEPDGWRGFG 655
+C++ + D +M+EN EHLLIFAAGN+G +ER++CTIN P I KN LAIGA++SG TR +IS+ G I TVA FSS+G T D RIKPE+VAPGD V SA SDGT+ SC++ A GTSMS PIVAGAAAM+RQYF + TFY DV RGFCS+ F+CE FSP+AATVKA+L+NSA+LMGGSSEPDG+RGFG
Sbjct: 335 ECSIASWDILNDQFMYENAEHLLIFAAGNEG---GEERSTCTINTPGIGKNSLAIGASTSGDTR---------VISTVGA---TGINTVAEFSSWGFTTDDRIKPEVVAPGDSVYSAASDGTDTHSCRLWAYEGTSMSCPIVAGAAAMIRQYFMDETFYMADVTARGFCSD--------VFICEGFSPSAATVKALLINSANLMGGSSEPDGFRGFG 528
BLAST of mRNA_S-dermatodea_contig1101.670.1 vs. uniprot
Match: A0A2I6U1S5_SACJA (Subtilisin n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1S5_SACJA) HSP 1 Score: 228 bits (582), Expect = 4.520e-66 Identity = 124/217 (57.14%), Postives = 158/217 (72.81%), Query Frame = 2
Query: 5 DCTVDLESMAYDAYMHENPEHLLIFAAGNDGDPEDQERTSCTINLPAIAKNVLAIGATSSGATRWPLTSDDGDLISSYGVDDVADIGTVAYFSSYGLTRDGRIKPELVAPGDQVLSAESDGTEEQSCKVSALAGTSMSTPIVAGAAAMVRQYFRNYTFYAHDVNERGFCSNFTDVNATNAFVCEEFSPAAATVKAMLVNSADLMGGSSEPDGWRGFG 655
+C V + YD +M+ NPE+L++ AAGN G+ ED RT CT+ PAI KN LA+GATSSG TR +TS DGD G + +D+ TVA FSSYG T+DGRIKPE+VAPGD V SA SDG++ SC++SA +GTSM+ PIVAGA+AMVRQYF + +FY D RG+C + + CE FSP++ATVKA+L+NSA+LMGGSSEPDG+RGFG
Sbjct: 555 ECAVRDTDLLYDDFMYNNPENLVVVAAGNAGEIEDG-RTVCTMYSPAIGKNALAVGATSSGETRVGVTSADGDRAD--GTNGYSDVDTVAVFSSYGPTQDGRIKPEVVAPGDAVYSARSDGSDVHSCRLSAKSGTSMACPIVAGASAMVRQYFMDESFYLADQAARGWCDD-------SGRQCESFSPSSATVKALLINSANLMGGSSEPDGFRGFG 761
BLAST of mRNA_S-dermatodea_contig1101.670.1 vs. uniprot
Match: A0A6H5K229_9PHAE (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K229_9PHAE) HSP 1 Score: 226 bits (576), Expect = 4.710e-65 Identity = 128/216 (59.26%), Postives = 154/216 (71.30%), Query Frame = 2
Query: 8 CTVDLESMAYDAYMHENPEHLLIFAAGNDGDPEDQERTSCTINLPAIAKNVLAIGATSSGATRWPLTSDDGDLISSYGVDDVADIGTVAYFSSYGLTRDGRIKPELVAPGDQVLSAESDGTEEQSCKVSALAGTSMSTPIVAGAAAMVRQYFRNYTFYAHDVNERGFCSNFTDVNATNAFVCEEFSPAAATVKAMLVNSADLMGGSSEPDGWRGFG 655
CT + YD +M+ENPE+LLIFAAGNDG + ER+ CT+ PAI KNVLA+GA++SG TR + S +G G+D VAD FSSYG T DGRIKPE+VAPGD V SA SDGT+ SC++ A GTSMS PIVAGAAAMVRQYF + TFY DV RGFCS+ F+CE FSP+AATVKA+L+NSA+LMG SS+PD +RGFG
Sbjct: 611 CTPGESEILYDDFMYENPENLLIFAAGNDG---ETERSVCTMASPAIGKNVLAVGASTSGDTR--VISTEGGA----GIDMVAD------FSSYGFTTDGRIKPEVVAPGDMVYSAASDGTDSHSCRLWAYQGTSMSCPIVAGAAAMVRQYFVDETFYTADVTARGFCSD--------GFICEGFSPSAATVKALLINSANLMGESSQPDAYRGFG 803
BLAST of mRNA_S-dermatodea_contig1101.670.1 vs. uniprot
Match: A0A6H5JKA8_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKA8_9PHAE) HSP 1 Score: 225 bits (573), Expect = 2.400e-64 Identity = 120/207 (57.97%), Postives = 148/207 (71.50%), Query Frame = 2
Query: 35 YDAYMHENPEHLLIFAAGNDGDPEDQERTSCTINLPAIAKNVLAIGATSSGATRWPLTSDDGDLISSYGVDDVADIGTVAYFSSYGLTRDGRIKPELVAPGDQVLSAESDGTEEQSCKVSALAGTSMSTPIVAGAAAMVRQYFRNYTFYAHDVNERGFCSNFTDVNATNAFVCEEFSPAAATVKAMLVNSADLMGGSSEPDGWRGFG 655
+D +M+ N + LL+FAAGNDGD + + CT+ PA+AKNVLA+GA++SG R T +DGD G V DI +AYFSS+G T D RIKPE+VAPGD + SA G +C++ AGTSMSTPIVAGAAA+VRQYF+N TFYAHDV ERGFC +F CE F+P+AATVKAML+NSA+LMGGS+EPDG RGFG
Sbjct: 734 FDDFMYRNQDQLLLFAAGNDGD----DWSGCTMGTPALAKNVLAVGASTSGPGRLSFTDEDGDPTD--GDSRVQDIDAMAYFSSFGPTLDNRIKPEVVAPGDMIYSAAGSGDGNYTCRLWQYAGTSMSTPIVAGAAALVRQYFKNETFYAHDVEERGFCDSFG---------CEPFAPSAATVKAMLINSANLMGGSAEPDGLRGFG 925
BLAST of mRNA_S-dermatodea_contig1101.670.1 vs. uniprot
Match: D8LNG6_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG6_ECTSI) HSP 1 Score: 221 bits (563), Expect = 2.600e-63 Identity = 125/217 (57.60%), Postives = 153/217 (70.51%), Query Frame = 2
Query: 5 DCTVDLESMAYDAYMHENPEHLLIFAAGNDGDPEDQERTSCTINLPAIAKNVLAIGATSSGATRWPLTSDDGDLISSYGVDDVADIGTVAYFSSYGLTRDGRIKPELVAPGDQVLSAESDGTEEQSCKVSALAGTSMSTPIVAGAAAMVRQYFRNYTFYAHDVNERGFCSNFTDVNATNAFVCEEFSPAAATVKAMLVNSADLMGGSSEPDGWRGFG 655
+C++ + D +M+EN E+LLIFAAGN+G ER++CTIN P I KN LAIGA++SG TR +IS+ G I TVA FSS+G T D RIKPE+VAPGD V SA SDGT+ SC++ A GTSMS PIVAGAAAM+RQYF + TFY DV RGFCS+ F+CE FSP+AATVKA+L+NSA+LMGGSSEPDG+RGFG
Sbjct: 574 ECSIASWDILNDQFMYENAENLLIFAAGNEG---GIERSTCTINTPGIGKNSLAIGASTSGDTR---------VISTVGA---TGIDTVAEFSSWGFTTDDRIKPEVVAPGDSVYSAASDGTDTHSCRLWAYEGTSMSCPIVAGAAAMIRQYFVDETFYTADVTARGFCSD--------GFICEGFSPSAATVKALLINSANLMGGSSEPDGFRGFG 767
BLAST of mRNA_S-dermatodea_contig1101.670.1 vs. uniprot
Match: D8LU20_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU20_ECTSI) HSP 1 Score: 220 bits (561), Expect = 5.210e-63 Identity = 123/241 (51.04%), Postives = 157/241 (65.15%), Query Frame = 2
Query: 8 CTVDLESMAYDAYMHENPEHLLIFAAGNDGDPED-QERTSCTINLPAIAKNVLAIGATSSGATRWPLTSDDGDLI-SSYGVDDV-----------------------ADIGTVAYFSSYGLTRDGRIKPELVAPGDQVLSAESDGTEEQSCKVSALAGTSMSTPIVAGAAAMVRQYFRNYTFYAHDVNERGFCSNFTDVNATNAFVCEEFSPAAATVKAMLVNSADLMGGSSEPDGWRGFG 655
C + YD++M+ENPEHLLIFAAGN G ED CTI PA+ KN+LA+GATSSG +R T +DG+L+ +G+ D A + TVA+FSS G T DGRIKP++VAPGDQV SA SDGT+ SC++ A GTS S P+VAGAAA+VRQYF++ +F+A DV RG C+ + + C EF+P+AATVKAM++NSA LMGGSSEP+G RGFG
Sbjct: 605 CQLTENEYLYDSFMYENPEHLLIFAAGNHGGNEDIPNHEGCTIGSPALGKNILAVGATSSGPSRGTRTGEDGNLVYEEFGMTDYSPEGYPWICLSPSLGTPSASMEPAGVDTVAFFSSQGPTLDGRIKPDVVAPGDQVASASSDGTDGHSCRLLANMGTSASCPLVAGAAALVRQYFKDPSFFAKDVTSRGGCAEHSSSSQ-----CSEFAPSAATVKAMIINSAHLMGGSSEPNGLRGFG 840
BLAST of mRNA_S-dermatodea_contig1101.670.1 vs. uniprot
Match: D8LSW0_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW0_ECTSI) HSP 1 Score: 219 bits (558), Expect = 1.710e-62 Identity = 125/241 (51.87%), Postives = 157/241 (65.15%), Query Frame = 2
Query: 8 CTVDLESMAYDAYMHENPEHLLIFAAGNDGDPED-QERTSCTINLPAIAKNVLAIGATSSGATRWPLTSDDGDLI-SSYGVDDV-----------------------ADIGTVAYFSSYGLTRDGRIKPELVAPGDQVLSAESDGTEEQSCKVSALAGTSMSTPIVAGAAAMVRQYFRNYTFYAHDVNERGFCSNFTDVNATNAFVCEEFSPAAATVKAMLVNSADLMGGSSEPDGWRGFG 655
C + + YD +M+ENPEHLLIFAAGNDG ED R +CT+ PA+ KN LA+GATSSG T DDG+L+ G+ D A + TVA+FSS G T DGRIKP++VAPGDQV SA SDGT+ SCK+ A GTS S P+VAGAAA+VRQYF++ +F+A DV RG C+ + ++ C EF+P+AATVKAM++NSA LMGGSSEP+G RGFG
Sbjct: 646 CQLTEDEYLYDTFMYENPEHLLIFAAGNDGGYEDIPNREACTVGSPALGKNSLAVGATSSGPFPGTRTGDDGNLVYEELGLTDYSPEGYPWICLTPFLGTPSASTEPAGVDTVAFFSSQGPTLDGRIKPDVVAPGDQVASASSDGTDGHSCKLVASMGTSASCPLVAGAAALVRQYFKDPSFFAKDVVSRGGCAEHS-----SSCQCSEFAPSAATVKAMIINSAHLMGGSSEPNGVRGFG 881
BLAST of mRNA_S-dermatodea_contig1101.670.1 vs. uniprot
Match: A0A6H5JQT4_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQT4_9PHAE) HSP 1 Score: 217 bits (552), Expect = 1.440e-61 Identity = 119/218 (54.59%), Postives = 153/218 (70.18%), Query Frame = 2
Query: 5 DCTVDLESMAYDAYMHENPEHLLIFAAGNDGDPEDQERTSCTINLPAIAKNVLAIGATSSGATRWPLTSDDGDLISSYGVDDVADIGTVAYFSSYGLTRDGRIKPELVAPGDQVLSAESDGT-EEQSCKVSALAGTSMSTPIVAGAAAMVRQYFRNYTFYAHDVNERGFCSNFTDVNATNAFVCEEFSPAAATVKAMLVNSADLMGGSSEPDGWRGFG 655
+C++ + YD +M NPE+LLIFAAGNDG ++ R++CT++ PAIAKNVLA+GA++SG TR T G I TVA FSSYG T D RIKPE++APGD + SA SDG+ + SC++ A AGTSMSTPIVAGA+AM+RQYF N TF+A D+ RGFC + CE FSP++AT+KA+++NSA+LMGGSSEPDG RGFG
Sbjct: 637 ECSLGPNDVLYDGWMVSNPENLLIFAAGNDG---ERRRSTCTMSSPAIAKNVLAVGASTSGDTRLSATPGLG-------------IDTVAVFSSYGPTSDSRIKPEVLAPGDAIYSAASDGSMDSHSCRLWAYAGTSMSTPIVAGASAMIRQYFMNETFFATDMTARGFCDEWAG--------CEAFSPSSATLKALMINSANLMGGSSEPDGSRGFG 830
BLAST of mRNA_S-dermatodea_contig1101.670.1 vs. uniprot
Match: D8LNG4_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG4_ECTSI) HSP 1 Score: 211 bits (537), Expect = 1.710e-60 Identity = 117/218 (53.67%), Postives = 149/218 (68.35%), Query Frame = 2
Query: 5 DCTVDLESMAYDAYMHENPEHLLIFAAGNDGDPEDQERTSCTINLPAIAKNVLAIGATSSGATRWPLTSDDGDLISSYGVDDVADIGTVAYFSSYGLTRDGRIKPELVAPGDQVLSAESDGT-EEQSCKVSALAGTSMSTPIVAGAAAMVRQYFRNYTFYAHDVNERGFCSNFTDVNATNAFVCEEFSPAAATVKAMLVNSADLMGGSSEPDGWRGFG 655
+C++ + YD +M NPE+LLIFAAGNDG + R++CTI PAIAKNVLA+GA++SG TR T G I TVA FSSYG T D RIKPE++APGD + SA SDG+ + SC++ A GTSMSTPIVAGA+AM+RQYF N TF+A D+ RGFC + CE FSP++AT+KA+++NSA+LMG SSEP+G RGFG
Sbjct: 327 ECSLGSNDVLYDEWMVSNPENLLIFAAGNDG---ELRRSTCTIGSPAIAKNVLAVGASTSGDTRLSATPGSG-------------IDTVAVFSSYGPTSDSRIKPEVLAPGDAIYSAASDGSVDTHSCRLWAYVGTSMSTPIVAGASAMIRQYFMNETFFATDMTARGFCDEWAG--------CEAFSPSSATLKALMINSANLMGESSEPNGSRGFG 520 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1101.670.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1101.670.1 >prot_S-dermatodea_contig1101.670.1 ID=prot_S-dermatodea_contig1101.670.1|Name=mRNA_S-dermatodea_contig1101.670.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=209bp MAYDAYMHENPEHLLIFAAGNDGDPEDQERTSCTINLPAIAKNVLAIGATback to top mRNA from alignment at S-dermatodea_contig1101:12384..15666- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1101.670.1 ID=mRNA_S-dermatodea_contig1101.670.1|Name=mRNA_S-dermatodea_contig1101.670.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3283bp|location=Sequence derived from alignment at S-dermatodea_contig1101:12384..15666- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1101:12384..15666- >mRNA_S-dermatodea_contig1101.670.1 ID=mRNA_S-dermatodea_contig1101.670.1|Name=mRNA_S-dermatodea_contig1101.670.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1254bp|location=Sequence derived from alignment at S-dermatodea_contig1101:12384..15666- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |