mRNA_S-dermatodea_contig1101.670.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig1101.670.1
Unique NamemRNA_S-dermatodea_contig1101.670.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig1101.670.1 vs. uniprot
Match: A0A2I6U1R2_SACJA (Subtilisin (Fragment) n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1R2_SACJA)

HSP 1 Score: 233 bits (594), Expect = 4.970e-68
Identity = 126/217 (58.06%), Postives = 160/217 (73.73%), Query Frame = 2
Query:    5 DCTVDLESMAYDAYMHENPEHLLIFAAGNDGDPEDQERTSCTINLPAIAKNVLAIGATSSGATRWPLTSDDGDLISSYGVDDVADIGTVAYFSSYGLTRDGRIKPELVAPGDQVLSAESDGTEEQSCKVSALAGTSMSTPIVAGAAAMVRQYFRNYTFYAHDVNERGFCSNFTDVNATNAFVCEEFSPAAATVKAMLVNSADLMGGSSEPDGWRGFG 655
            +C+V  + + YD +M+ NPE+L++ AAGN GD ED  RT CT+  PAI KN LA+GATSSG TR   TS DGDLI   G +  AD+ TVA FSSYG T+DGRIKPE+VAPGD + SA SDG++  SC++SA +GTSM+ PIVAGA+AMVRQYF + +FY  D   RG+  +       +   CE FSP++ATVKA+L+NSA+LMGGSSEPDG+RGFG
Sbjct:  559 ECSVCEKDVLYDDFMYNNPENLVVVAAGNAGDTEDG-RTVCTMYSPAIGKNALAVGATSSGETRITKTSADGDLID--GTNGYADVDTVAQFSSYGPTQDGRIKPEVVAPGDAIYSARSDGSDNHSCRLSAKSGTSMACPIVAGASAMVRQYFMDESFYVADQAARGWSDD-------SGRRCESFSPSSATVKALLINSANLMGGSSEPDGYRGFG 765          
BLAST of mRNA_S-dermatodea_contig1101.670.1 vs. uniprot
Match: A0A6H5K365_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K365_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 1.950e-66
Identity = 126/217 (58.06%), Postives = 154/217 (70.97%), Query Frame = 2
Query:    5 DCTVDLESMAYDAYMHENPEHLLIFAAGNDGDPEDQERTSCTINLPAIAKNVLAIGATSSGATRWPLTSDDGDLISSYGVDDVADIGTVAYFSSYGLTRDGRIKPELVAPGDQVLSAESDGTEEQSCKVSALAGTSMSTPIVAGAAAMVRQYFRNYTFYAHDVNERGFCSNFTDVNATNAFVCEEFSPAAATVKAMLVNSADLMGGSSEPDGWRGFG 655
            +C++    +  D +M+EN EHLLIFAAGN+G    +ER++CTIN P I KN LAIGA++SG TR         +IS+ G      I TVA FSS+G T D RIKPE+VAPGD V SA SDGT+  SC++ A  GTSMS PIVAGAAAM+RQYF + TFY  DV  RGFCS+         F+CE FSP+AATVKA+L+NSA+LMGGSSEPDG+RGFG
Sbjct:  335 ECSIASWDILNDQFMYENAEHLLIFAAGNEG---GEERSTCTINTPGIGKNSLAIGASTSGDTR---------VISTVGA---TGINTVAEFSSWGFTTDDRIKPEVVAPGDSVYSAASDGTDTHSCRLWAYEGTSMSCPIVAGAAAMIRQYFMDETFYMADVTARGFCSD--------VFICEGFSPSAATVKALLINSANLMGGSSEPDGFRGFG 528          
BLAST of mRNA_S-dermatodea_contig1101.670.1 vs. uniprot
Match: A0A2I6U1S5_SACJA (Subtilisin n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1S5_SACJA)

HSP 1 Score: 228 bits (582), Expect = 4.520e-66
Identity = 124/217 (57.14%), Postives = 158/217 (72.81%), Query Frame = 2
Query:    5 DCTVDLESMAYDAYMHENPEHLLIFAAGNDGDPEDQERTSCTINLPAIAKNVLAIGATSSGATRWPLTSDDGDLISSYGVDDVADIGTVAYFSSYGLTRDGRIKPELVAPGDQVLSAESDGTEEQSCKVSALAGTSMSTPIVAGAAAMVRQYFRNYTFYAHDVNERGFCSNFTDVNATNAFVCEEFSPAAATVKAMLVNSADLMGGSSEPDGWRGFG 655
            +C V    + YD +M+ NPE+L++ AAGN G+ ED  RT CT+  PAI KN LA+GATSSG TR  +TS DGD     G +  +D+ TVA FSSYG T+DGRIKPE+VAPGD V SA SDG++  SC++SA +GTSM+ PIVAGA+AMVRQYF + +FY  D   RG+C +       +   CE FSP++ATVKA+L+NSA+LMGGSSEPDG+RGFG
Sbjct:  555 ECAVRDTDLLYDDFMYNNPENLVVVAAGNAGEIEDG-RTVCTMYSPAIGKNALAVGATSSGETRVGVTSADGDRAD--GTNGYSDVDTVAVFSSYGPTQDGRIKPEVVAPGDAVYSARSDGSDVHSCRLSAKSGTSMACPIVAGASAMVRQYFMDESFYLADQAARGWCDD-------SGRQCESFSPSSATVKALLINSANLMGGSSEPDGFRGFG 761          
BLAST of mRNA_S-dermatodea_contig1101.670.1 vs. uniprot
Match: A0A6H5K229_9PHAE (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K229_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 4.710e-65
Identity = 128/216 (59.26%), Postives = 154/216 (71.30%), Query Frame = 2
Query:    8 CTVDLESMAYDAYMHENPEHLLIFAAGNDGDPEDQERTSCTINLPAIAKNVLAIGATSSGATRWPLTSDDGDLISSYGVDDVADIGTVAYFSSYGLTRDGRIKPELVAPGDQVLSAESDGTEEQSCKVSALAGTSMSTPIVAGAAAMVRQYFRNYTFYAHDVNERGFCSNFTDVNATNAFVCEEFSPAAATVKAMLVNSADLMGGSSEPDGWRGFG 655
            CT     + YD +M+ENPE+LLIFAAGNDG   + ER+ CT+  PAI KNVLA+GA++SG TR  + S +G      G+D VAD      FSSYG T DGRIKPE+VAPGD V SA SDGT+  SC++ A  GTSMS PIVAGAAAMVRQYF + TFY  DV  RGFCS+         F+CE FSP+AATVKA+L+NSA+LMG SS+PD +RGFG
Sbjct:  611 CTPGESEILYDDFMYENPENLLIFAAGNDG---ETERSVCTMASPAIGKNVLAVGASTSGDTR--VISTEGGA----GIDMVAD------FSSYGFTTDGRIKPEVVAPGDMVYSAASDGTDSHSCRLWAYQGTSMSCPIVAGAAAMVRQYFVDETFYTADVTARGFCSD--------GFICEGFSPSAATVKALLINSANLMGESSQPDAYRGFG 803          
BLAST of mRNA_S-dermatodea_contig1101.670.1 vs. uniprot
Match: A0A6H5JKA8_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKA8_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 2.400e-64
Identity = 120/207 (57.97%), Postives = 148/207 (71.50%), Query Frame = 2
Query:   35 YDAYMHENPEHLLIFAAGNDGDPEDQERTSCTINLPAIAKNVLAIGATSSGATRWPLTSDDGDLISSYGVDDVADIGTVAYFSSYGLTRDGRIKPELVAPGDQVLSAESDGTEEQSCKVSALAGTSMSTPIVAGAAAMVRQYFRNYTFYAHDVNERGFCSNFTDVNATNAFVCEEFSPAAATVKAMLVNSADLMGGSSEPDGWRGFG 655
            +D +M+ N + LL+FAAGNDGD    + + CT+  PA+AKNVLA+GA++SG  R   T +DGD     G   V DI  +AYFSS+G T D RIKPE+VAPGD + SA   G    +C++   AGTSMSTPIVAGAAA+VRQYF+N TFYAHDV ERGFC +F          CE F+P+AATVKAML+NSA+LMGGS+EPDG RGFG
Sbjct:  734 FDDFMYRNQDQLLLFAAGNDGD----DWSGCTMGTPALAKNVLAVGASTSGPGRLSFTDEDGDPTD--GDSRVQDIDAMAYFSSFGPTLDNRIKPEVVAPGDMIYSAAGSGDGNYTCRLWQYAGTSMSTPIVAGAAALVRQYFKNETFYAHDVEERGFCDSFG---------CEPFAPSAATVKAMLINSANLMGGSAEPDGLRGFG 925          
BLAST of mRNA_S-dermatodea_contig1101.670.1 vs. uniprot
Match: D8LNG6_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG6_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 2.600e-63
Identity = 125/217 (57.60%), Postives = 153/217 (70.51%), Query Frame = 2
Query:    5 DCTVDLESMAYDAYMHENPEHLLIFAAGNDGDPEDQERTSCTINLPAIAKNVLAIGATSSGATRWPLTSDDGDLISSYGVDDVADIGTVAYFSSYGLTRDGRIKPELVAPGDQVLSAESDGTEEQSCKVSALAGTSMSTPIVAGAAAMVRQYFRNYTFYAHDVNERGFCSNFTDVNATNAFVCEEFSPAAATVKAMLVNSADLMGGSSEPDGWRGFG 655
            +C++    +  D +M+EN E+LLIFAAGN+G     ER++CTIN P I KN LAIGA++SG TR         +IS+ G      I TVA FSS+G T D RIKPE+VAPGD V SA SDGT+  SC++ A  GTSMS PIVAGAAAM+RQYF + TFY  DV  RGFCS+         F+CE FSP+AATVKA+L+NSA+LMGGSSEPDG+RGFG
Sbjct:  574 ECSIASWDILNDQFMYENAENLLIFAAGNEG---GIERSTCTINTPGIGKNSLAIGASTSGDTR---------VISTVGA---TGIDTVAEFSSWGFTTDDRIKPEVVAPGDSVYSAASDGTDTHSCRLWAYEGTSMSCPIVAGAAAMIRQYFVDETFYTADVTARGFCSD--------GFICEGFSPSAATVKALLINSANLMGGSSEPDGFRGFG 767          
BLAST of mRNA_S-dermatodea_contig1101.670.1 vs. uniprot
Match: D8LU20_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU20_ECTSI)

HSP 1 Score: 220 bits (561), Expect = 5.210e-63
Identity = 123/241 (51.04%), Postives = 157/241 (65.15%), Query Frame = 2
Query:    8 CTVDLESMAYDAYMHENPEHLLIFAAGNDGDPED-QERTSCTINLPAIAKNVLAIGATSSGATRWPLTSDDGDLI-SSYGVDDV-----------------------ADIGTVAYFSSYGLTRDGRIKPELVAPGDQVLSAESDGTEEQSCKVSALAGTSMSTPIVAGAAAMVRQYFRNYTFYAHDVNERGFCSNFTDVNATNAFVCEEFSPAAATVKAMLVNSADLMGGSSEPDGWRGFG 655
            C +      YD++M+ENPEHLLIFAAGN G  ED      CTI  PA+ KN+LA+GATSSG +R   T +DG+L+   +G+ D                        A + TVA+FSS G T DGRIKP++VAPGDQV SA SDGT+  SC++ A  GTS S P+VAGAAA+VRQYF++ +F+A DV  RG C+  +  +      C EF+P+AATVKAM++NSA LMGGSSEP+G RGFG
Sbjct:  605 CQLTENEYLYDSFMYENPEHLLIFAAGNHGGNEDIPNHEGCTIGSPALGKNILAVGATSSGPSRGTRTGEDGNLVYEEFGMTDYSPEGYPWICLSPSLGTPSASMEPAGVDTVAFFSSQGPTLDGRIKPDVVAPGDQVASASSDGTDGHSCRLLANMGTSASCPLVAGAAALVRQYFKDPSFFAKDVTSRGGCAEHSSSSQ-----CSEFAPSAATVKAMIINSAHLMGGSSEPNGLRGFG 840          
BLAST of mRNA_S-dermatodea_contig1101.670.1 vs. uniprot
Match: D8LSW0_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW0_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 1.710e-62
Identity = 125/241 (51.87%), Postives = 157/241 (65.15%), Query Frame = 2
Query:    8 CTVDLESMAYDAYMHENPEHLLIFAAGNDGDPED-QERTSCTINLPAIAKNVLAIGATSSGATRWPLTSDDGDLI-SSYGVDDV-----------------------ADIGTVAYFSSYGLTRDGRIKPELVAPGDQVLSAESDGTEEQSCKVSALAGTSMSTPIVAGAAAMVRQYFRNYTFYAHDVNERGFCSNFTDVNATNAFVCEEFSPAAATVKAMLVNSADLMGGSSEPDGWRGFG 655
            C +  +   YD +M+ENPEHLLIFAAGNDG  ED   R +CT+  PA+ KN LA+GATSSG      T DDG+L+    G+ D                        A + TVA+FSS G T DGRIKP++VAPGDQV SA SDGT+  SCK+ A  GTS S P+VAGAAA+VRQYF++ +F+A DV  RG C+  +     ++  C EF+P+AATVKAM++NSA LMGGSSEP+G RGFG
Sbjct:  646 CQLTEDEYLYDTFMYENPEHLLIFAAGNDGGYEDIPNREACTVGSPALGKNSLAVGATSSGPFPGTRTGDDGNLVYEELGLTDYSPEGYPWICLTPFLGTPSASTEPAGVDTVAFFSSQGPTLDGRIKPDVVAPGDQVASASSDGTDGHSCKLVASMGTSASCPLVAGAAALVRQYFKDPSFFAKDVVSRGGCAEHS-----SSCQCSEFAPSAATVKAMIINSAHLMGGSSEPNGVRGFG 881          
BLAST of mRNA_S-dermatodea_contig1101.670.1 vs. uniprot
Match: A0A6H5JQT4_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQT4_9PHAE)

HSP 1 Score: 217 bits (552), Expect = 1.440e-61
Identity = 119/218 (54.59%), Postives = 153/218 (70.18%), Query Frame = 2
Query:    5 DCTVDLESMAYDAYMHENPEHLLIFAAGNDGDPEDQERTSCTINLPAIAKNVLAIGATSSGATRWPLTSDDGDLISSYGVDDVADIGTVAYFSSYGLTRDGRIKPELVAPGDQVLSAESDGT-EEQSCKVSALAGTSMSTPIVAGAAAMVRQYFRNYTFYAHDVNERGFCSNFTDVNATNAFVCEEFSPAAATVKAMLVNSADLMGGSSEPDGWRGFG 655
            +C++    + YD +M  NPE+LLIFAAGNDG   ++ R++CT++ PAIAKNVLA+GA++SG TR   T   G             I TVA FSSYG T D RIKPE++APGD + SA SDG+ +  SC++ A AGTSMSTPIVAGA+AM+RQYF N TF+A D+  RGFC  +          CE FSP++AT+KA+++NSA+LMGGSSEPDG RGFG
Sbjct:  637 ECSLGPNDVLYDGWMVSNPENLLIFAAGNDG---ERRRSTCTMSSPAIAKNVLAVGASTSGDTRLSATPGLG-------------IDTVAVFSSYGPTSDSRIKPEVLAPGDAIYSAASDGSMDSHSCRLWAYAGTSMSTPIVAGASAMIRQYFMNETFFATDMTARGFCDEWAG--------CEAFSPSSATLKALMINSANLMGGSSEPDGSRGFG 830          
BLAST of mRNA_S-dermatodea_contig1101.670.1 vs. uniprot
Match: D8LNG4_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG4_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 1.710e-60
Identity = 117/218 (53.67%), Postives = 149/218 (68.35%), Query Frame = 2
Query:    5 DCTVDLESMAYDAYMHENPEHLLIFAAGNDGDPEDQERTSCTINLPAIAKNVLAIGATSSGATRWPLTSDDGDLISSYGVDDVADIGTVAYFSSYGLTRDGRIKPELVAPGDQVLSAESDGT-EEQSCKVSALAGTSMSTPIVAGAAAMVRQYFRNYTFYAHDVNERGFCSNFTDVNATNAFVCEEFSPAAATVKAMLVNSADLMGGSSEPDGWRGFG 655
            +C++    + YD +M  NPE+LLIFAAGNDG   +  R++CTI  PAIAKNVLA+GA++SG TR   T   G             I TVA FSSYG T D RIKPE++APGD + SA SDG+ +  SC++ A  GTSMSTPIVAGA+AM+RQYF N TF+A D+  RGFC  +          CE FSP++AT+KA+++NSA+LMG SSEP+G RGFG
Sbjct:  327 ECSLGSNDVLYDEWMVSNPENLLIFAAGNDG---ELRRSTCTIGSPAIAKNVLAVGASTSGDTRLSATPGSG-------------IDTVAVFSSYGPTSDSRIKPEVLAPGDAIYSAASDGSVDTHSCRLWAYVGTSMSTPIVAGASAMIRQYFMNETFFATDMTARGFCDEWAG--------CEAFSPSSATLKALMINSANLMGESSEPNGSRGFG 520          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1101.670.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2I6U1R2_SACJA4.970e-6858.06Subtilisin (Fragment) n=1 Tax=Saccharina japonica ... [more]
A0A6H5K365_9PHAE1.950e-6658.06Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
A0A2I6U1S5_SACJA4.520e-6657.14Subtilisin n=1 Tax=Saccharina japonica TaxID=88149... [more]
A0A6H5K229_9PHAE4.710e-6559.26Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A... [more]
A0A6H5JKA8_9PHAE2.400e-6457.97Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
D8LNG6_ECTSI2.600e-6357.60Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D8LU20_ECTSI5.210e-6351.04Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D8LSW0_ECTSI1.710e-6251.87Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5JQT4_9PHAE1.440e-6154.59Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
D8LNG4_ECTSI1.710e-6053.67Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1101contigS-dermatodea_contig1101:12384..15666 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score231.1
Seed ortholog evalue4.7e-58
Seed eggNOG ortholog2880.D8LNG5
EggNOG free text desc.tripeptidyl-peptidase activity
EggNOG OGsCOG1404@1,KOG1114@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size655
Cds size627
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1101.670.1prot_S-dermatodea_contig1101.670.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig1101 12384..15638 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924183.7849407-CDS-S-dermatodea_contig1101:12383..124521622924183.7849407-CDS-S-dermatodea_contig1101:12383..12452Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1101 12384..12452 -
1694079075.618223-CDS-S-dermatodea_contig1101:12383..124521694079075.618223-CDS-S-dermatodea_contig1101:12383..12452Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1101 12384..12452 -
1622924183.7945359-CDS-S-dermatodea_contig1101:13252..133901622924183.7945359-CDS-S-dermatodea_contig1101:13252..13390Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1101 13253..13390 -
1694079075.6297863-CDS-S-dermatodea_contig1101:13252..133901694079075.6297863-CDS-S-dermatodea_contig1101:13252..13390Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1101 13253..13390 -
1622924183.8067293-CDS-S-dermatodea_contig1101:14133..142381622924183.8067293-CDS-S-dermatodea_contig1101:14133..14238Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1101 14134..14238 -
1694079075.6379488-CDS-S-dermatodea_contig1101:14133..142381694079075.6379488-CDS-S-dermatodea_contig1101:14133..14238Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1101 14134..14238 -
1622924183.8150864-CDS-S-dermatodea_contig1101:14503..147911622924183.8150864-CDS-S-dermatodea_contig1101:14503..14791Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1101 14504..14791 -
1694079075.6460342-CDS-S-dermatodea_contig1101:14503..147911694079075.6460342-CDS-S-dermatodea_contig1101:14503..14791Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1101 14504..14791 -
1622924183.8238006-CDS-S-dermatodea_contig1101:15611..156381622924183.8238006-CDS-S-dermatodea_contig1101:15611..15638Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1101 15612..15638 -
1694079075.6547325-CDS-S-dermatodea_contig1101:15611..156381694079075.6547325-CDS-S-dermatodea_contig1101:15611..15638Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1101 15612..15638 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924183.8362308-UTR-S-dermatodea_contig1101:15638..156661622924183.8362308-UTR-S-dermatodea_contig1101:15638..15666Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1101 15639..15666 -
1694079075.6638207-UTR-S-dermatodea_contig1101:15638..156661694079075.6638207-UTR-S-dermatodea_contig1101:15638..15666Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1101 15639..15666 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig1101.670.1

>prot_S-dermatodea_contig1101.670.1 ID=prot_S-dermatodea_contig1101.670.1|Name=mRNA_S-dermatodea_contig1101.670.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=209bp
MAYDAYMHENPEHLLIFAAGNDGDPEDQERTSCTINLPAIAKNVLAIGAT
SSGATRWPLTSDDGDLISSYGVDDVADIGTVAYFSSYGLTRDGRIKPELV
APGDQVLSAESDGTEEQSCKVSALAGTSMSTPIVAGAAAMVRQYFRNYTF
YAHDVNERGFCSNFTDVNATNAFVCEEFSPAAATVKAMLVNSADLMGGSS
EPDGWRGFG
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mRNA from alignment at S-dermatodea_contig1101:12384..15666-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig1101.670.1 ID=mRNA_S-dermatodea_contig1101.670.1|Name=mRNA_S-dermatodea_contig1101.670.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3283bp|location=Sequence derived from alignment at S-dermatodea_contig1101:12384..15666- (Saccorhiza dermatodea SderLu1190fm monoicous)
CGGGGACTGCACCGTTGATTTAGAGTCCATGGCGTACGATGCATACATGC ACGAGGTGAGCTTTTGGCTACTGCTGTGTGGACTTACGGTGCTGTGGGGA CTGACGGCGGTTGTGACCACCAAGGCTGTATTGTGTGTGTATGTGTTTTT TTTTTCTTTTCATGTTTAGAATTTCGCGGCACCTTCCCGTCTTTGATACC GCCGGCAAGTCTGACACGCGATATGATGCATCCCCGATGGCCGCTAACTT TTCTGCACGCCGTTTTTCCGCCCCCCTCCCGCGCCTGAAAACTAAATTGA ATTCAAACCAACAGAGCGAGCGTTGGGGTCCCCACCTTTTTGACGAGGAA ACCCCACTCCAACCTCCCCCCCAGAAATAGCCCGAAATTCGCCAATTTTA GTAGATAGAATAGGCAAAACAATTTTTAGCCATCTTTGGCAAAGAGTTAG GAATGATTGATTGGCCATCGGCGATCGATCCTGCCGCAACTACAATTTAC CGTCCGTCGTCTCGAGGACCTGCGGTCAATGGCCTACCAGCATAAGCCGT GCAAAACTTAAGCACCCCTACCCCCCCCCCCCCCCCACCCCCCCCCCACC CCCCCCCCCCCCACCCACCCCCCCCCCCCCCCCCCCCCCACCCCCCCCTC CCNNNNNNNNNNCCCCCCCCCTCAACTTCTCCCGGCCTCTCCCTCGGGCA CCCGAGTTCAACCCCCCCCCACACACACCCGGACAAAACTCACGCCCCCC CCCCCCCCCCCCCCCCCCCCCCCGCCCCGAACGGTTCTGAACTCGTGGGC CTCGTTCTCGATCCTCGATCCTCGATCGATCCGACGTTGCTCCGCACGTT TCTCCGCGCGGCGCTGGCGCTGCAGAACCCGGAGCACCTGCTGATATTCG CTGCGGGCAACGATGGCGATCCTGAAGACCAAGAACGCACGTCCTGCACC ATCAACTTGCCCGCCATCGCCAAGAACGTTCTCGCGATCGGCGCCACCTC CTCGGGAGCGACGCGCTGGCCCTTAACTTCGGACGACGGCGACCTGATAT CTTCGTACGGTGTCGACGACGTCGCCGATATCGGCACGGTAGCGTACTTC AGCTCGTACGGTCTCACGAGAGACGGTCGCATCAAGCCGGAGCTCGTGGC GCCCGGCGACCAGGTGACGATCGATCCCTCTCGTCGGCGGGCTAAAAGGA AGGAAGAGGAAATAGCTTGGGTATTGTTTTGAACCGCTCGCTGTTCAACC ACCTGGTGGAATTTTTTGGCTCGGACCGCTCTTGCTCCTTCTGTGTATGA CAGCTATTGTAGCTCCCTTTTGCGTAGCTATCGGCTTGGGAGGTTGGATT CCTGGCGATCCCTGTTGTGCTATCATTGTCGTTTTCGTCAGGTTCTCGAC CAGCGTACCGACGCCTTTTGCCGAGCAGGTGCTCTCCGCCGAAAGCGATG GAACCGAGGAGCAAAGCTGCAAGGTTTCGGCGCTTGCCGGAACAAGCATG TCGACCCCCATCGTGGCTGGCGCGGCGGCCATGGTGAGCCCGCGTGCGTC ATATGCGTGTTTTGCCGAGGTTGTATGTGTCGTAGAGGCTACGTATCCGA TGTTTTTTGCGCTGTTTGGCTACTACACACTGACTACGGTAGAACTGGCG GTTAGGGTAGTTGGGATGTGTCCGCGTTTTGTTCGATGCCTACAGAGAGA GAGAGAGATAAGGGTTTCCAATTTATCCAGCCCCTTGATGGGTACTTCGT GGCAACCAACGATGCACGCGTTCGTTCTATAACGGAGGTACACAGGGATC AGGATCACATTTCTGCTGAATGGCGAATTAAAGTCTTGTTTTTTTTTAAC GTTGGCCCGCACACGTTACTGTAGATATATTTTTTTGTTTTTGATTTGTC ATATCAGGCCGGAAGATTATAGTTGCTGTAAGGCCAGACCAAATTGAGTT CGGGTTTGTTATGGTGGGCTTACTGTTTGACACATTTGGTCCTGATTTCT CAGTCTACCTCTGTAATAGCAGCGCTACGGTGTCGGCGTTCAGGACGCAA TTACGTCGGTCCCTACACCCCGGCGTGCGTGCGCGCTTGTGCTGAAGGGG ACGGGCTCCCCTCTCGATCGCCTCCGATGCCACTCGCTCGCCTCGCCTCG TCTCGCGAACCCTAGCCTCTTGAGAATCCTCGCCTCCCGAATCATCGCCT GGCGCAGCCTCGCGCGAAAGCAATCCAACCCGCGCTCACCGTGCTGCCCG TGGACTCCCGTTGCGACGACGAGCAGGTGCGGCAGTACTTCAGGAATTAC ACCTTCTACGCCCATGACGTGAACGAAAGGGGCTTTTGCTCTAACTTTAC GGACGTCAACGCGACCAACGCGTTCGTGTGCGAAGAGTTCTCTCCCGCCG CCGCTACGGTAAAGGTGAGGGGCCCAGCAGCTGGTCGCGATAACGGTTCG TTCTACCGCCCAATCTATTATGTTTTCTCCTTTGACGGAGCGAGCGGTTC GTGGGCCACGCTCGCTCGCTGCCATTCGGTAGATTTTTCAAATTGGTTAA TTGTTTGATGGGTTGTATAATCGATTGGTGTATTGTCACGCTTGTACAAC CGACGGGCCCCGCCAATATGTTTTGCCGATCTCGCTTGCTCGTGGTAAGA TGGGAAATAGATAAATCGAACAAATCAAACACTACGGAGTGCCCTTATCT AGGTAGGTAAAGAATCAGCACAACAACGCTCGGAGGCAGAGAGGGCTTAC CTCGGCACTTGGGCCTGCTATACGGTACACCCCCTGAAACATTTTTTTGT TTTACAAAACACACAGCGAACGTTGGGGTCCAATCTTTTTGTCGAGGAAA AGATGACCCGAGCTCACTCAGCGAAGGTCTACGTTATCTATAAAGCTGTG GGGTCATTGTAGAAATGTTACTATCTGGGTACCAGGGGTGTGGCACTACA ATACAATATTACGGTACACAACCCCCCCCCCCCTTAATGGTTTCGCCATC GCGCGCGATGCATCTTCGCACCCAAAAGCATATTCTTGGTTGGTTCCGCC AGCGCCTATCGCGAAACTCGTCGAGTCGCGCTTGCGTCGGCTGGTGGTGG AACGCAGCGAGCGCAGCTCTCTGTTGCCGCGTGTGGTCGGCACGATTACC TGAGTTACCGGCTTGCTTTTCACCGTTTCGGGGATGCGGTTCTTTCGCAT AAACCACATGGCAGGCGATGCTCGTCAACAGCGCGGACCTTATGGGCGGG AGCTCGGAGCCCGATGGCTGGCGAGGCTTCGGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig1101:12384..15666-

>mRNA_S-dermatodea_contig1101.670.1 ID=mRNA_S-dermatodea_contig1101.670.1|Name=mRNA_S-dermatodea_contig1101.670.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1254bp|location=Sequence derived from alignment at S-dermatodea_contig1101:12384..15666- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCGTACGATGCATACATGCACGAGATGGCGTACGATGCATACATGCA
CGAGAACCCGGAGCACCTGCTGATATTCGCTGCGGGCAACGATGGCGATC
CTGAAGACCAAGAACGCACGTCCTGCACCATCAACTTGCCCGCCATCGCC
AAGAACGTTCTCGCGATCGGCGCCACCTCCTCGGGAGCGACGCGCTGGCC
CTTAACTTCGGACGACGGCGACCTGATATCTTCGTACGGTGTCGACGACG
TCGCCGATATCGGCACGGTAGCGTACTTCAGCTCGTACGGTCTCACGAGA
GACGGTCGCATCAAGCCGGAGCTCGTGGCGCCCGGCGACCAGAACCCGGA
GCACCTGCTGATATTCGCTGCGGGCAACGATGGCGATCCTGAAGACCAAG
AACGCACGTCCTGCACCATCAACTTGCCCGCCATCGCCAAGAACGTTCTC
GCGATCGGCGCCACCTCCTCGGGAGCGACGCGCTGGCCCTTAACTTCGGA
CGACGGCGACCTGATATCTTCGTACGGTGTCGACGACGTCGCCGATATCG
GCACGGTAGCGTACTTCAGCTCGTACGGTCTCACGAGAGACGGTCGCATC
AAGCCGGAGCTCGTGGCGCCCGGCGACCAGGTGCTCTCCGCCGAAAGCGA
TGGAACCGAGGAGCAAAGCTGCAAGGTTTCGGCGCTTGCCGGAACAAGCA
TGTCGACCCCCATCGTGGCTGGCGCGGCGGCCATGGTGCTCTCCGCCGAA
AGCGATGGAACCGAGGAGCAAAGCTGCAAGGTTTCGGCGCTTGCCGGAAC
AAGCATGTCGACCCCCATCGTGGCTGGCGCGGCGGCCATGGTGCGGCAGT
ACTTCAGGAATTACACCTTCTACGCCCATGACGTGAACGAAAGGGGCTTT
TGCTCTAACTTTACGGACGTCAACGCGACCAACGCGTTCGTGTGCGAAGA
GTTCTCTCCCGCCGCCGCTACGGTAAAGGTGCGGCAGTACTTCAGGAATT
ACACCTTCTACGCCCATGACGTGAACGAAAGGGGCTTTTGCTCTAACTTT
ACGGACGTCAACGCGACCAACGCGTTCGTGTGCGAAGAGTTCTCTCCCGC
CGCCGCTACGGTAAAGGCGATGCTCGTCAACAGCGCGGACCTTATGGGCG
GGAGCTCGGAGCCCGATGGCTGGCGAGGCTTCGGGGCGATGCTCGTCAAC
AGCGCGGACCTTATGGGCGGGAGCTCGGAGCCCGATGGCTGGCGAGGCTT
CGGG
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