mRNA_S-dermatodea_contig11006.668.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11006.668.1
Unique NamemRNA_S-dermatodea_contig11006.668.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig11006.668.1 vs. uniprot
Match: D7FJF1_ECTSI (Protein-tyrosine-phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJF1_ECTSI)

HSP 1 Score: 351 bits (900), Expect = 5.790e-115
Identity = 217/418 (51.91%), Postives = 264/418 (63.16%), Query Frame = 1
Query:    1 GARLFLGTQQAAKNRELLLRSGVSRIVCLGTPAFHR--ETEVAAVASGSFEYLEIPILDLPSENLVERLDECVAFIQDGLRLGRGVLVNCVFAQSRSAAVVVAYLMKREGISLVQAVGRVLEAQPTVHINPGFEAQLALYHGMGCSSGGAE----APGGPPATAASRCGEEDIDAAQQLLRSAK-----AGATYRWFLFACRLRNGKGAGSLGGSEAGIHARQQEEEVPAGKRRFSREAVFQCKACGSHLFTESNVIDHLHAVVLAASDSTYASFARHGDGSSWLAARDAAAAAATGXXXXXXXXSWGRKKN--RPKTTSSRSDAAIPKKGVPAAG-GSCTSVFTEALEWIGSMKGSGGLSLASFEGSSGRISCPGSKGNARGVCGSKLGAWSLEGTACSCGRMVKPALQFTLSRIER 1212
            GARLF+GTQ+AA++R LL R  VSRIVC+GTPAFH+  + EV +  S +  YLE+ ILDLPSENL+ RLD CV+FI++G+     VLVNCV+AQSRS  VV AYLM+ +G+S+ QA+  V EAQPTVHINPGF+AQL LY  +GC     +     P  P A       EE I  +Q+   S       A ATYRWFLFAC L  G G G  GG     H          G     R  +++CKAC + LF +SNV+DHLH VV AASDST+ASF++HGDGSSW+ ARDAA  AA G        + GR     R    ++ S+    K  V +AG G CTSVFTEAL+W+  +    G     F  SSG+I CPG KG    VCGSKLGAWSL+G  CSCGR+VKPA QFTLSRIER
Sbjct:   14 GARLFVGTQKAAQDRSLLRRHRVSRIVCVGTPAFHQGDDDEVHSNGSKNISYLEVDILDLPSENLLGRLDSCVSFIEEGMSREENVLVNCVYAQSRSPTVVAAYLMRLKGLSVAQAIELVQEAQPTVHINPGFQAQLDLYSDLGCRLPATKKVEIGPTAPSAGGRGVAPEEPIGISQESKPSTNTTTVWAAATYRWFLFACGLNLGGGFGGEGGHNGAFH----------GGEGCGR--LYRCKACRAPLFRDSNVLDHLHPVVQAASDSTFASFSKHGDGSSWIKARDAADIAAAGSTKTVVRGAKGRHDPTVRRGGGATHSNNNCGKSVVSSAGKGMCTSVFTEALDWV--VVADRGRHSGHFAHSSGKICCPGKKGTV--VCGSKLGAWSLDGINCSCGRLVKPAFQFTLSRIER 415          
BLAST of mRNA_S-dermatodea_contig11006.668.1 vs. uniprot
Match: A0A225VA18_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VA18_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 6.400e-20
Identity = 72/201 (35.82%), Postives = 100/201 (49.75%), Query Frame = 1
Query:   10 LFLGTQQAAKNRELLLRSGVSRIVCLGTPAFHRETEVAAVASGSFEYLEIPILDLPSENLVERLDECVAFIQDGLRLGRGVLVNCVFAQSRSAAVVVAYLMKREGISLVQAVGRVLEAQPTVHINPGFEAQLALYHGMGCSSGGAEAPGGPPATAASRC----------GEEDIDAAQQLLRSAKAGATYRWFLFACRLRN 582
            LFLG   AA++   L  + +  +V LGT           +A+   E L I ILD+  E L+   DEC+AF++  L     VLV+CV+ QSRSA + VAYLM  +G +L++A   V +A+P + INPGF  QL L+  MG      E  G  PA A  R           G  D+ +  QLLR   +    +     C +RN
Sbjct:   39 LFLGEAGAAQDATFLRANSIQAVVALGT---------GNLAAKPCEVLLIDILDMEDELLLPHFDECIAFLKKYLMQSLAVLVHCVYGQSRSATICVAYLMATQGQTLLEAYDVVQQARPCISINPGFLKQLELFERMGSDP---EIMGNTPAHAELRTMMAQRQRMKTGITDVISTPQLLRPGSSMCCRKCNYVLCTMRN 227          
BLAST of mRNA_S-dermatodea_contig11006.668.1 vs. uniprot
Match: A0A6G0WXD5_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXD5_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 2.710e-19
Identity = 73/248 (29.44%), Postives = 108/248 (43.55%), Query Frame = 1
Query:    7 RLFLGTQQAAKNRELLLRSGVSRIVCLGTPAFHRETEVAAVASGSFEYLEIPILDLPSENLVERLDECVAFIQDGLRLGRGVLVNCVFAQSRSAAVVVAYLMKREGISLVQAVGRVLEAQPTVHINPGFEAQLALYHGMGCSSGGAEAPGGPPATAASRCGEEDIDAAQQLLRSAKAGATYRWFLFACRLRNGKGAGSLGGSEAGIHARQQEEEVPAGKRRFSREAVFQCKACGSHLFTESNVIDHLH 750
            +LF+G+  AA +       G+  ++ LGT           +A    E L I ILD+    ++E  D C AF+++  R+G+  LV+CV+ QSRSA + VA++M  + +SL  +  RV  A+P +HIN GF AQL L+  M C                            QL+  + A ATYR    A R    +    L   +  +H        P   +R        CK C  HL +  N + H H
Sbjct:   36 QLFIGSADAASDPSTTAEHGIHSVISLGT---------GPLAPPPVETLCIDILDMEDAFILEHFDTCFAFLKEQARIGKSTLVHCVYGQSRSATICVAFVMLIDRMSLEASYDRVQTARPCIHINRGFLAQLELFQAMQC----------------------------QLVGVSSAHATYRTMATAQRRSRDR---LLALDDNSLHG------APGTAKRI------YCKKCNFHLCSHDNAVFHAH 231          
BLAST of mRNA_S-dermatodea_contig11006.668.1 vs. uniprot
Match: A0A397DC37_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DC37_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 4.470e-19
Identity = 56/143 (39.16%), Postives = 82/143 (57.34%), Query Frame = 1
Query:    1 GARLFLGTQQAAKNRELLLRSGVSRIVCLGTPAFHRETEVAAVASGSFEYLEIPILDLPSENLVERLDECVAFIQDGLRLGRGVLVNCVFAQSRSAAVVVAYLMKREGISLVQAVGRVLEAQPTVHINPGFEAQLALYHGMGC 429
            G  LF+G+ +AA N  ++   G+  ++ LGT A    +EV  V+        I ILD+    L++  D C AF+    +     LV+CV+ QSRSAA+ VA+LM  E +SL Q+  RV  A+P ++IN GF +QLAL+  M C
Sbjct:   29 GFHLFVGSAEAASNATMMQELGIGAVLALGTKAL---SEVETVS--------IDILDMEQAFLMQHFDACFAFLHRQEQRHVQTLVHCVYGQSRSAAICVAFLMHSEQLSLQQSYDRVQAARPCIYINSGFLSQLALFEAMQC 160          
BLAST of mRNA_S-dermatodea_contig11006.668.1 vs. uniprot
Match: W4GZK1_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GZK1_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 8.370e-19
Identity = 79/247 (31.98%), Postives = 113/247 (45.75%), Query Frame = 1
Query:    1 GARLFLGTQQAAKNRELLLRSGVSRIVCLGTPAFHRETEVAAVASGSFEYLEIPILDLPSENLVERLDECVAFIQDGLRLGRGVLVNCVFAQSRSAAVVVAYLMKREGISLVQAVGRVLEAQPTVHINPGFEAQLALYHGMGCSSGGAEAPGGPPATAASRCGEEDIDAAQQLLRSAKAGATYRW-FLFACRLRNGKGAGSLGGSEAGIHARQQEEEVPAGKRRFSREAVFQCKACGSHLFTESNVI 738
            G  LF+G+ +AA N  ++   G+  ++ LGT A    +EV  V+        I ILD+    L++  D C AF+    +     LV+CV+ QSRSAA+ VA+LM  E +SL Q+  RV  A+P ++IN GF +QLAL+  M C                            QLL S+ A AT+R  + +   + + KG   L      + A       P  KR F       CK C  HL    NV+
Sbjct:   29 GFHLFVGSAEAASNATMMQELGIGAVLALGTKAL---SEVETVS--------IDILDMEQAFLMQHFDACFAFLHRQEQRHVPTLVHCVYGQSRSAAICVAFLMHSEQLSLRQSYDRVQAARPCIYINSGFLSQLALFEAMQC----------------------------QLLGSSPAHATFRLRWTYERHVNHNKGPVMLYPQPTAMAA-------PTIKRIF-------CKKCNLHLGVADNVV 222          
BLAST of mRNA_S-dermatodea_contig11006.668.1 vs. uniprot
Match: A0A485LM92_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LM92_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 9.500e-19
Identity = 56/146 (38.36%), Postives = 83/146 (56.85%), Query Frame = 1
Query:   10 LFLGTQQAAKNRELLLRSGVSRIVCLGTPAFHRETEVAAVASGSFEYLEIPILDLPSENLVERLDECVAFIQDGLRLG-RGVLVNCVFAQSRSAAVVVAYLMKREGISLVQAVGRVLEAQPTVHINPGFEAQLALYHGMGCSSGGA 444
            L++G+  AA N  L+   G++ ++ LGT          A+A    E L I ILD+    ++E  D C+ F+ + +R   R  LV+CV+ QSRSA + VA++M+ E +SL  +  RV  A+P +HINPGF  QL L+  M C   GA
Sbjct:   36 LYVGSADAASNASLMEEHGIAAVIALGT---------GALAPPPVETLCIDILDMEEAFIMEHFDMCLHFLHEHIRRKKRPTLVHCVYGQSRSATICVAFIMQSERLSLRASYARVQAARPCIHINPGFLGQLELFDAMQCQLQGA 172          
BLAST of mRNA_S-dermatodea_contig11006.668.1 vs. uniprot
Match: A0A7S4GLK0_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GLK0_9EUGL)

HSP 1 Score: 90.9 bits (224), Expect = 6.740e-18
Identity = 51/141 (36.17%), Postives = 79/141 (56.03%), Query Frame = 1
Query:    7 RLFLGTQQAAKNRELLLRSGVSRIVCLGTPAFHRETEVAAVASGSFEYLEIPILDLPSENLVERLDECVAFIQDGLRLGRGVLVNCVFAQSRSAAVVVAYLMKREGISLVQAVGRVLEAQPTVHINPGFEAQLALYHGMGC 429
            R+F+G+  A  N   L  + +++++        RE      +S  FEY  + ++D P ENL++  DEC  F+   +  G GVLV+C   +SRSAA+V+A+LM+R GISL  A  +V   +P +  N GF  QL  +  +GC
Sbjct:   31 RIFIGSCDAEANVPALKAANIAKVLMAA-----REL---TPSSDGFEYCTVGLVDKPEENLLQHFDECFDFVDAAVTRGEGVLVHCYAGRSRSAAIVIAWLMRRGGISLQAAWAQVSAVRPWIAPNEGFVRQLQHFEAVGC 163          
BLAST of mRNA_S-dermatodea_contig11006.668.1 vs. uniprot
Match: A0A2P4YJ68_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YJ68_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 8.330e-18
Identity = 70/203 (34.48%), Postives = 98/203 (48.28%), Query Frame = 1
Query:    4 ARLFLGTQQAAKNRELLLRSGVSRIVCLGTPAFHRETEVAAVASGSFEYLEIPILDLPSENLVERLDECVAFIQDGLRLGRGVLVNCVFAQSRSAAVVVAYLMKREGISLVQAVGRVLEAQPTVHINPGFEAQLALYHGMGCSSGGAEAPGGPPATAASRC----------GEEDIDAAQQLLRSAKAGATYRWFLFACRLRN 582
            + LFLG  +AA++   L  + +  ++ LGT           +     E L I ILD+  E L+   DEC+AF++  L    GVLV+CV+ QSRSAA+ VA+ M  +  +L++A   V +A+P + INPGF  QL L+  MG      E  G  PA A  R           G  DI A  QL R   +    +     C  RN
Sbjct:   28 SHLFLGEAEAAQDAAFLESNNIQAVIALGT---------GNLTVKPCEVLLIDILDMEDELLLPHFDECIAFLKKNLVSEGGVLVHCVYGQSRSAAICVAFQMATQDKTLLEAYNVVQQARPCISINPGFLRQLELFERMGNDP---EVMGNTPAHAELRTMMAQRQRMKTGVADIIATPQLTRPGNSICCRKCNYVLCTTRN 218          
BLAST of mRNA_S-dermatodea_contig11006.668.1 vs. uniprot
Match: A0A4P9ZV35_9FUNG (Protein-tyrosine-phosphatase n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZV35_9FUNG)

HSP 1 Score: 94.0 bits (232), Expect = 1.310e-17
Identity = 105/406 (25.86%), Postives = 164/406 (40.39%), Query Frame = 1
Query:   10 LFLGTQQAAKNRELLLRSGVSRIVCLGT---PAFHRETEVAAVASGSFEYLEIPILDLPSENLVERLDECVAFIQDGLRLGRGVLVNCVFAQSRSAAVVVAYLMKREGISLVQAVGRVLEAQPTVHINPGFEAQLALYHGMGCSSGGAEAPGGPPATAASRCGEEDIDAAQQLLRSAKAGATYR---WFLFACRLRNGKGAGSLGGSEAGIHARQQEEEVPAGKRRFSREAVFQCKACGSHLFTESNVIDHLHAVVLAASDSTYASFARHGDGSSWLAARDAAAAAATGXXXXXXXXSWGRKKNRPKTTSSRSDAAIPKKGVPAAGGSCTSVFTEALEWIGSMKGSGGLSLASFEGSSGRISCPGSKGNARGVCGSKLGAWSLEGTACSCGRMVKPALQFTLSRIE 1209
            L+LG   AA +   L ++ ++ I+C+G+   P F ++          F+Y  I I D PSEN+ +   +   FI + +R G  VLV+C+   SRSA+VV+AY+MK   + L +A   V E +  +  NPGF  QL +Y  MGC  G   A       A     E +   A + + +     TYR          + +  G      + A   A         GK  +      +CK C   LF +  V++H  A        ++     H      +                    +   ++   +T      ++   KG  A    C+S F E ++WI       G    + EG   RI C          CG+KLGA+   G++CSC R V PA     S+++
Sbjct:   11 LYLGNYDAASDMRFLRQANITHILCVGSYLSPRFPQQ----------FQYYCIDIDDDPSENIQQYFPKTHPFIWNAIRGGGNVLVHCMAGISRSASVVIAYIMKSLEMPLKEAYSLVQEKRDFIQPNPGFYKQLQMYESMGCEVGSNHATYRRYEAAR----EAETKRATRPVPTKPNSPTYRPDQHINIPVTVMSTAGPSHTSPAPAAALA------ATGGKTGY------RCKKCRHVLFNDDFVVEHAPAAT-----KSFTGHKNHNQPQYII------------QPISETSNAMFTERRYLQTALPTPPSSTQTKGPSAP---CSSYFVEPMKWID------GAHNGTHEG---RIDCS--------KCGTKLGAYDWAGSSCSCSRWVTPAFMIHKSKVD 353          
BLAST of mRNA_S-dermatodea_contig11006.668.1 vs. uniprot
Match: A0A067RP10_ZOONE (Uncharacterized protein n=1 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067RP10_ZOONE)

HSP 1 Score: 90.5 bits (223), Expect = 1.730e-17
Identity = 54/139 (38.85%), Postives = 79/139 (56.83%), Query Frame = 1
Query:   10 LFLGTQQAAKNRELLLRSGVSRIVCLGT-PAFHRETEVAAVASGSFEYLEIPILDLPSENLVERLDECVAFIQDGLRLGRGVLVNCVFAQSRSAAVVVAYLMKREGISLVQAVGRVLEAQPTVHINPGFEAQLALYHGM 423
            L++G+Q   ++ +LL +  V+ I+ LG  P    ET           ++ I +LDLP  NLV  LD+C AFI   ++ G  V V+C    SRSA+VV+AYLMK++G+S  QA   + E +  ++ NPGF  QL  Y  M
Sbjct:   69 LYMGSQDVIQDADLLQKHSVTHILSLGVKPIIMDET---------LTHMYIQLLDLPESNLVSNLDQCFAFIDSAIQTGGCVFVHCNAGISRSASVVIAYLMKKQGMSYQQAFLYLKERRTMINPNPGFAQQLKDYEKM 198          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11006.668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJF1_ECTSI5.790e-11551.91Protein-tyrosine-phosphatase n=2 Tax=Ectocarpus Ta... [more]
A0A225VA18_9STRA6.400e-2035.82Protein-tyrosine-phosphatase n=1 Tax=Phytophthora ... [more]
A0A6G0WXD5_9STRA2.710e-1929.44Protein-tyrosine-phosphatase n=1 Tax=Aphanomyces e... [more]
A0A397DC37_9STRA4.470e-1939.16Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
W4GZK1_9STRA8.370e-1931.98Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A485LM92_9STRA9.500e-1938.36Protein-tyrosine-phosphatase n=1 Tax=Aphanomyces s... [more]
A0A7S4GLK0_9EUGL6.740e-1836.17Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A2P4YJ68_9STRA8.330e-1834.48Protein-tyrosine-phosphatase n=1 Tax=Phytophthora ... [more]
A0A4P9ZV35_9FUNG1.310e-1725.86Protein-tyrosine-phosphatase n=1 Tax=Dimargaris cr... [more]
A0A067RP10_ZOONE1.730e-1738.85Uncharacterized protein n=1 Tax=Zootermopsis nevad... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11006contigS-dermatodea_contig11006:3836..5131 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score358.2
Seed ortholog evalue5e-96
Seed eggNOG ortholog2880.D7FJF1
KEGG rclassRC00478
KEGG koko:K00472,ko:K14819
KEGG ReactionR01252
KEGG Pathwayko00330,ko01100,map00330,map01100
EggNOG free text desc.phosphatase
EggNOG OGsCOG2453@1,KOG1716@2759
EC1.14.11.2,3.1.3.16,3.1.3.48
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01009,ko03009
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionDual specificity phosphatase, subgroup, catalytic domain
Ec32 orthologEc-14_006110.1
Exons2
Model size1230
Cds size1230
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924183.67385-CDS-S-dermatodea_contig11006:3835..39671622924183.67385-CDS-S-dermatodea_contig11006:3835..3967Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11006 3836..3967 +
1694079075.5700862-CDS-S-dermatodea_contig11006:3835..39671694079075.5700862-CDS-S-dermatodea_contig11006:3835..3967Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11006 3836..3967 +
1622924183.6857626-CDS-S-dermatodea_contig11006:4033..51311622924183.6857626-CDS-S-dermatodea_contig11006:4033..5131Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11006 4034..5131 +
1694079075.5830877-CDS-S-dermatodea_contig11006:4033..51311694079075.5830877-CDS-S-dermatodea_contig11006:4033..5131Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11006 4034..5131 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11006.668.1prot_S-dermatodea_contig11006.668.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11006 3836..5131 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11006.668.1

>prot_S-dermatodea_contig11006.668.1 ID=prot_S-dermatodea_contig11006.668.1|Name=mRNA_S-dermatodea_contig11006.668.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=410bp
GARLFLGTQQAAKNRELLLRSGVSRIVCLGTPAFHRETEVAAVASGSFEY
LEIPILDLPSENLVERLDECVAFIQDGLRLGRGVLVNCVFAQSRSAAVVV
AYLMKREGISLVQAVGRVLEAQPTVHINPGFEAQLALYHGMGCSSGGAEA
PGGPPATAASRCGEEDIDAAQQLLRSAKAGATYRWFLFACRLRNGKGAGS
LGGSEAGIHARQQEEEVPAGKRRFSREAVFQCKACGSHLFTESNVIDHLH
AVVLAASDSTYASFARHGDGSSWLAARDAAAAAATGAPAAATAASWGRKK
NRPKTTSSRSDAAIPKKGVPAAGGSCTSVFTEALEWIGSMKGSGGLSLAS
FEGSSGRISCPGSKGNARGVCGSKLGAWSLEGTACSCGRMVKPALQFTLS
RIERRRSPA*
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mRNA from alignment at S-dermatodea_contig11006:3836..5131+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11006.668.1 ID=mRNA_S-dermatodea_contig11006.668.1|Name=mRNA_S-dermatodea_contig11006.668.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1296bp|location=Sequence derived from alignment at S-dermatodea_contig11006:3836..5131+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GGTGCCCGTCTCTTTCTCGGTACCCAGCAGGCGGCTAAAAATCGCGAGCT CTTGCTCCGGAGCGGAGTGTCAAGGATCGTGTGTCTGGGCACGCCAGCGT TTCACCGGGAGACAGAGGTGGCGGCGGTTGCGGTGGCGTTGGCTAGCGGA GATGGCATCAGCGACGGGGGAAGCAATGATACGGGCTGTGGCATCAAGAG CGGTAGCTTCGAGTACCTGGAGATACCCATTCTGGATCTTCCCTCTGAGA ACCTTGTGGAACGACTCGACGAATGCGTCGCGTTCATCCAGGACGGGTTG CGGCTAGGGCGTGGGGTGCTGGTGAACTGCGTCTTCGCGCAGAGCAGAAG CGCTGCTGTCGTCGTCGCATACCTCATGAAACGCGAGGGCATTTCCCTGG TTCAGGCCGTTGGCAGGGTCCTCGAGGCGCAACCAACTGTCCACATCAAC CCGGGGTTCGAGGCCCAGCTAGCTTTGTACCATGGCATGGGTTGCAGCTC CGGGGGGGCGGAGGCACCAGGCGGCCCACCTGCGACGGCAGCCTCGCGAT GCGGTGAAGAGGACATCGACGCGGCTCAACAGCTTCTGAGAAGCGCCAAA GCCGGCGCCACCTACCGGTGGTTCTTGTTTGCTTGCCGCTTGAGAAATGG CAAGGGCGCGGGGTCCCTCGGTGGCAGCGAGGCGGGGATCCACGCACGGC AGCAAGAAGAGGAGGTTCCGGCGGGCAAACGTCGCTTCTCGCGAGAGGCG GTATTCCAGTGCAAGGCGTGCGGCAGCCATCTCTTCACCGAGAGTAACGT CATTGACCACTTGCATGCGGTCGTCCTCGCGGCGAGCGACAGCACGTACG CCTCGTTCGCCAGGCACGGGGACGGAAGCTCGTGGCTGGCCGCTAGAGAT GCCGCTGCCGCTGCCGCCACCGGCGCCCCCGCCGCCGCCACCGCCGCATC TTGGGGGAGGAAGAAGAACAGACCCAAGACAACGAGCTCTCGCAGCGATG CAGCCATTCCGAAAAAGGGAGTTCCCGCCGCAGGAGGCTCCTGTACTTCC GTATTCACCGAGGCGCTGGAGTGGATCGGCTCAATGAAGGGCAGCGGCGG CCTTTCTCTAGCGTCTTTCGAAGGGAGCTCCGGCAGGATTTCGTGTCCCG GGAGCAAGGGGAATGCGCGGGGCGTTTGCGGCAGCAAGCTCGGAGCGTGG AGCCTGGAGGGCACGGCTTGCAGCTGCGGTAGGATGGTGAAGCCGGCGCT GCAGTTCACCCTCAGCCGCATCGAGCGCAGGCGTTCTCCTGCGTGA
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Coding sequence (CDS) from alignment at S-dermatodea_contig11006:3836..5131+

>mRNA_S-dermatodea_contig11006.668.1 ID=mRNA_S-dermatodea_contig11006.668.1|Name=mRNA_S-dermatodea_contig11006.668.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2460bp|location=Sequence derived from alignment at S-dermatodea_contig11006:3836..5131+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GGTGCCCGTCTCTTTCTCGGTACCCAGCAGGCGGCTAAAAATCGCGAGCT
CTTGCTCCGGAGCGGAGTGTCAAGGATCGTGTGTCTGGGCACGCCAGCGT
TTCACCGGGAGACAGAGGTGGCGGCGGTTGCGGGTGCCCGTCTCTTTCTC
GGTACCCAGCAGGCGGCTAAAAATCGCGAGCTCTTGCTCCGGAGCGGAGT
GTCAAGGATCGTGTGTCTGGGCACGCCAGCGTTTCACCGGGAGACAGAGG
TGGCGGCGGTTGCGAGCGGTAGCTTCGAGTACCTGGAGATACCCATTCTG
GATCTTCCCTCTGAGAACCTTGTGGAACGACTCGACGAATGCGTCGCGTT
CATCCAGGACGGGTTGCGGCTAGGGCGTGGGGTGCTGGTGAACTGCGTCT
TCGCGCAGAGCAGAAGCGCTGCTGTCGTCGTCGCATACCTCATGAAACGC
GAGGGCATTTCCCTGGTTCAGGCCGTTGGCAGGGTCCTCGAGGCGCAACC
AACTGTCCACATCAACCCGGGGTTCGAGGCCCAGCTAGCTTTGTACCATG
GCATGGGTTGCAGCTCCGGGGGGGCGGAGGCACCAGGCGGCCCACCTGCG
ACGGCAGCCTCGCGATGCGGTGAAGAGGACATCGACGCGGCTCAACAGCT
TCTGAGAAGCGCCAAAGCCGGCGCCACCTACCGGTGGTTCTTGTTTGCTT
GCCGCTTGAGAAATGGCAAGGGCGCGGGGTCCCTCGGTGGCAGCGAGGCG
GGGATCCACGCACGGCAGCAAGAAGAGGAGGTTCCGGCGGGCAAACGTCG
CTTCTCGCGAGAGGCGGTATTCCAGTGCAAGGCGTGCGGCAGCCATCTCT
TCACCGAGAGTAACGTCATTGACCACTTGCATGCGGTCGTCCTCGCGGCG
AGCGACAGCACGTACGCCTCGTTCGCCAGGCACGGGGACGGAAGCTCGTG
GCTGGCCGCTAGAGATGCCGCTGCCGCTGCCGCCACCGGCGCCCCCGCCG
CCGCCACCGCCGCATCTTGGGGGAGGAAGAAGAACAGACCCAAGACAACG
AGCTCTCGCAGCGATGCAGCCATTCCGAAAAAGGGAGTTCCCGCCGCAGG
AGGCTCCTGTACTTCCGTATTCACCGAGGCGCTGGAGTGGATCGGCTCAA
TGAAGGGCAGCGGCGGCCTTTCTCTAGCGTCTTTCGAAGGGAGCTCCGGC
AGGATTTCGTGTCCCGGGAGCAAGGGGAATGCGCGGGGCGTTTGCGGCAG
CAAGCTCGGAGCGTGGAGCCTGGAGGGCACGGCTTGCAGCTGCGGTAGGA
TGGTGAAGCCGGCGCTGCAGTTCACCCTCAGCCGCATCGAGCGCAGGCGT
TCTCCTGCGTGAAGCGGTAGCTTCGAGTACCTGGAGATACCCATTCTGGA
TCTTCCCTCTGAGAACCTTGTGGAACGACTCGACGAATGCGTCGCGTTCA
TCCAGGACGGGTTGCGGCTAGGGCGTGGGGTGCTGGTGAACTGCGTCTTC
GCGCAGAGCAGAAGCGCTGCTGTCGTCGTCGCATACCTCATGAAACGCGA
GGGCATTTCCCTGGTTCAGGCCGTTGGCAGGGTCCTCGAGGCGCAACCAA
CTGTCCACATCAACCCGGGGTTCGAGGCCCAGCTAGCTTTGTACCATGGC
ATGGGTTGCAGCTCCGGGGGGGCGGAGGCACCAGGCGGCCCACCTGCGAC
GGCAGCCTCGCGATGCGGTGAAGAGGACATCGACGCGGCTCAACAGCTTC
TGAGAAGCGCCAAAGCCGGCGCCACCTACCGGTGGTTCTTGTTTGCTTGC
CGCTTGAGAAATGGCAAGGGCGCGGGGTCCCTCGGTGGCAGCGAGGCGGG
GATCCACGCACGGCAGCAAGAAGAGGAGGTTCCGGCGGGCAAACGTCGCT
TCTCGCGAGAGGCGGTATTCCAGTGCAAGGCGTGCGGCAGCCATCTCTTC
ACCGAGAGTAACGTCATTGACCACTTGCATGCGGTCGTCCTCGCGGCGAG
CGACAGCACGTACGCCTCGTTCGCCAGGCACGGGGACGGAAGCTCGTGGC
TGGCCGCTAGAGATGCCGCTGCCGCTGCCGCCACCGGCGCCCCCGCCGCC
GCCACCGCCGCATCTTGGGGGAGGAAGAAGAACAGACCCAAGACAACGAG
CTCTCGCAGCGATGCAGCCATTCCGAAAAAGGGAGTTCCCGCCGCAGGAG
GCTCCTGTACTTCCGTATTCACCGAGGCGCTGGAGTGGATCGGCTCAATG
AAGGGCAGCGGCGGCCTTTCTCTAGCGTCTTTCGAAGGGAGCTCCGGCAG
GATTTCGTGTCCCGGGAGCAAGGGGAATGCGCGGGGCGTTTGCGGCAGCA
AGCTCGGAGCGTGGAGCCTGGAGGGCACGGCTTGCAGCTGCGGTAGGATG
GTGAAGCCGGCGCTGCAGTTCACCCTCAGCCGCATCGAGCGCAGGCGTTC
TCCTGCGTGA
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