mRNA_S-dermatodea_contig11000.665.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11000.665.1 vs. uniprot
Match: D8LCX1_ECTSI (PNP_UDP_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCX1_ECTSI) HSP 1 Score: 281 bits (719), Expect = 5.630e-94 Identity = 133/159 (83.65%), Postives = 146/159 (91.82%), Query Frame = 1
Query: 10 DAAEAAPLIERLGLVEEPGKFPAAAPSKCFSGSYKDATISVVTNGKCDRFGVDQIGTVAAGLSTWLSVETLKPDLVINAGTAGGFVKHDTSIGDVFVSSRVRNHDRRIPIPGFKEFGVGDHESHPTPALLKELGFKHGVVTTGSSFDHTEMDDKMMEEN 486
+ AEA PLIERLGLVE+P KFPAAAPSKCFSGSY+ A I+VVTNGKC RFGVDQIGTVAAGLSTWLSVE +KPD+VINAGTAGGF KHDT+IGDVF+S+ V+NHDRRIPIPGFKEFG+G+HESHP P +LKELGFK GVVTTGSSFDHTE DDKMMEEN
Sbjct: 16 NTAEACPLIERLGLVEDPDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQIGTVAAGLSTWLSVEAIKPDIVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPAPEMLKELGFKQGVVTTGSSFDHTETDDKMMEEN 174
BLAST of mRNA_S-dermatodea_contig11000.665.1 vs. uniprot
Match: A0A6H5JA26_9PHAE (PNP_UDP_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA26_9PHAE) HSP 1 Score: 280 bits (717), Expect = 1.670e-92 Identity = 132/157 (84.08%), Postives = 147/157 (93.63%), Query Frame = 1
Query: 16 AEAAPLIERLGLVEEPGKFPAAAPSKCFSGSYKDATISVVTNGKCDRFGVDQIGTVAAGLSTWLSVETLKPDLVINAGTAGGFVKHDTSIGDVFVSSRVRNHDRRIPIPGFKEFGVGDHESHPTPALLKELGFKHGVVTTGSSFDHTEMDDKMMEEN 486
AEA+PLIERLGLVE+P KFPAAAPSKCFSGSY+ A I+VVTNGKC RFGVDQ+GTVAAGLSTWLSVE +KPDLVINAGTAGGF KHDT+IGDVF+S+ V+NHDRRIPIPGFKEFG+G+HESHPTP +LKELGFK GVV+TGSSFDHT+ DDKMMEEN
Sbjct: 100 AEASPLIERLGLVEDPDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQVGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPTPEMLKELGFKQGVVSTGSSFDHTKTDDKMMEEN 256
BLAST of mRNA_S-dermatodea_contig11000.665.1 vs. uniprot
Match: A0A835YY09_9STRA (Nucleoside phosphorylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY09_9STRA) HSP 1 Score: 179 bits (453), Expect = 8.820e-54 Identity = 91/154 (59.09%), Postives = 108/154 (70.13%), Query Frame = 1
Query: 16 AEAAPLIERLGLVEEPGKFPAAAPSKCFSGSYKDATISVVTNGKCDRFGVDQIGTVAAGLSTWLSVETLKPDLVINAGTAGGFVKHDTSIGDVFVSSRVRNHDRRIPIPGFKEFGVGDHESHPTPALLKELGFKHGVVTTGSSFDHTEMDDKMM 477
AEA PLI+ L L + FPA+AP KC++ T+ VVTNGKC R GVD +GTVA GL+ WLS+E KPDLVINAGTAGGF + +IGDVFVSSR NHDRRI IPG+ E+GVG ++ PT L LG+KHGVVTT +S D E D K M
Sbjct: 3 AEAQPLIDHLKLELDEAAFPASAPCKCYTSERNGYTMHVVTNGKCRRHGVDHVGTVAGGLAAWLSIEKFKPDLVINAGTAGGFNRMGAAIGDVFVSSRTVNHDRRIAIPGWTEWGVGKTDAVPTEQLRGALGYKHGVVTTSNSLDFIEEDAKHM 156
BLAST of mRNA_S-dermatodea_contig11000.665.1 vs. uniprot
Match: W7TST5_9STRA (Nucleoside phosphorylase domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TST5_9STRA) HSP 1 Score: 168 bits (425), Expect = 4.360e-49 Identity = 82/156 (52.56%), Postives = 111/156 (71.15%), Query Frame = 1
Query: 19 EAAPLIERLGLVEEPGKFPAAAPSKCFSGSYKDATISVVTNGKCDRFGVDQIGTVAAGLSTWLSVETLKPDLVINAGTAGGFVKHDTSIGDVFVSSRVRNHDRRIPIPGFKEFGVGDHESHPTPALLKELGFKHGVVTTGSSFDHTEMDDKMMEEN 486
EA PLI +LGL ++ F AAP CF+G+Y + +++VTNGK +FG D +GTV A L+T+L+VE LKPDL+INAGTAGGF +IGDV +SS + NHDRR+ +P F ++GV +H++ TP L + L FK GVV+TG+S DH E DD +M N
Sbjct: 42 EAMPLITKLGLTQQSNYFGHAAPFHCFTGTYNNYNLAIVTNGKDRKFGCDNVGTVPAALATYLAVEQLKPDLLINAGTAGGFESKGMAIGDVLISSTIHNHDRRMLLPIFVDYGVHNHKAVETPRLREALKFKLGVVSTGNSLDHVEADDALMAAN 197
BLAST of mRNA_S-dermatodea_contig11000.665.1 vs. uniprot
Match: A0A7S2V4K5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4K5_9STRA) HSP 1 Score: 168 bits (425), Expect = 4.610e-49 Identity = 87/171 (50.88%), Postives = 112/171 (65.50%), Query Frame = 1
Query: 16 AEAAPLIERLGLV-------EEPGKFPAAA-------PSKCFSGSYKDATISVVTNGKCDRFGVDQIGTVAAGLSTWLSVETLKPDLVINAGTAGGFVKHDTSIGDVFVSSRVRNHDRRIPIPGFKEFGVGDHESHPTPALLKELGFKHGVVTTGSSFDHTEMDDKMMEEN 486
AEAAPL+E LGL E G +A P+ + G + I VVTNGK ++GVD +GTV AGL T+LS+ + PD+VINAGT GGF+ +GDVF+SS +NHDRRI IPGF E+G+GD+ + PTP L+KELG+K GVVTTG+S DH DD++M N
Sbjct: 29 AEAAPLVEHLGLTKCECNGDESNGDGGQSANILSGPMPAVVYEGEVNECKIFVVTNGKDPKYGVDNVGTVCAGLVTYLSLLAISPDIVINAGTCGGFISKGAQVGDVFISSAFKNHDRRIAIPGFSEWGIGDYAAVPTPNLVKELGYKTGVVTTGNSLDHVPKDDEIMAAN 199
BLAST of mRNA_S-dermatodea_contig11000.665.1 vs. uniprot
Match: A0A6S9GE08_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GE08_HETAK) HSP 1 Score: 164 bits (414), Expect = 1.380e-47 Identity = 81/157 (51.59%), Postives = 105/157 (66.88%), Query Frame = 1
Query: 16 AEAAPLIERLGLVEEPGKFPAAAPSKCFSGSYKDATISVVTNGKCDRFGVDQIGTVAAGLSTWLSVETLKPDLVINAGTAGGFVKHDTSIGDVFVSSRVRNHDRRIPIPGFKEFGVGDHESHPTPALLKELGFKHGVVTTGSSFDHTEMDDKMMEEN 486
AEA PLI+ LGL E+ F P+KCFSG + VV NG+ +FG D +GTV A L+T+ ++TL PDL+INAGTAGGF + IGD+F+S+ +NHDRRI IP F E+ G +E T + KELGFK G+VTTG+S DH DD++M EN
Sbjct: 27 AEAQPLIDCLGLTEQSSVFSGPLPAKCFSGLVDGCNVDVVVNGQDPKFGNDSVGTVCAALTTYEGLKTLSPDLLINAGTAGGFRRKGAEIGDIFLSTECKNHDRRIAIPSFTEWATGAYECVSTANMQKELGFKCGIVTTGNSLDHEPKDDELMLEN 183
BLAST of mRNA_S-dermatodea_contig11000.665.1 vs. uniprot
Match: A0A087SFB9_AUXPR (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SFB9_AUXPR) HSP 1 Score: 163 bits (412), Expect = 3.970e-47 Identity = 82/158 (51.90%), Postives = 110/158 (69.62%), Query Frame = 1
Query: 16 AEAAPLIERLGLVEE-PGKFPAAAPSKCFSGSYKDATISVVTNGKCDRFGVDQIGTVAAGLSTWLSVETLKPDLVINAGTAGGFVKHDTSIGDVFVSSRVRNHDRRIPIPGFKEFGVGDHESHPTPALLKELGFKHGVVTTGSSFDHTEMDDKMMEEN 486
AEAAPLI+ LGLV++ P P AP FSGS+ A + VV NGKC + GVD +GTV A L+ +L+++ PDLVI+ GTAGGF +IGDVF+S+ NHDRRIPIPGF ++G+G H + PTP L LG K G+V++G+S D+ E D ++M E+
Sbjct: 48 AEAAPLIQALGLVQDTPRVIPEPAPCVSFSGSHAGAHVHVVVNGKCGKHGVDNVGTVPAALTAYLALQAFDPDLVISTGTAGGFGAQGAAIGDVFLSTATVNHDRRIPIPGFDQYGLGLHAALPTPQLQAALGLKAGLVSSGNSLDYVERDMEIMREH 205
BLAST of mRNA_S-dermatodea_contig11000.665.1 vs. uniprot
Match: A0A1D1ZX64_AUXPR (PNP_UDP_1 domain-containing protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZX64_AUXPR) HSP 1 Score: 163 bits (412), Expect = 4.930e-47 Identity = 82/158 (51.90%), Postives = 110/158 (69.62%), Query Frame = 1
Query: 16 AEAAPLIERLGLVEE-PGKFPAAAPSKCFSGSYKDATISVVTNGKCDRFGVDQIGTVAAGLSTWLSVETLKPDLVINAGTAGGFVKHDTSIGDVFVSSRVRNHDRRIPIPGFKEFGVGDHESHPTPALLKELGFKHGVVTTGSSFDHTEMDDKMMEEN 486
AEAAPLI+ LGLV++ P P AP FSGS+ A + VV NGKC + GVD +GTV A L+ +L+++ PDLVI+ GTAGGF +IGDVF+S+ NHDRRIPIPGF ++G+G H + PTP L LG K G+V++G+S D+ E D ++M E+
Sbjct: 48 AEAAPLIQALGLVQDTPRVIPEPAPCVSFSGSHAGAHVHVVVNGKCGKHGVDNVGTVPAALTAYLALQAFDPDLVISTGTAGGFGAQGAAIGDVFLSTATVNHDRRIPIPGFDQYGLGLHAALPTPQLQAALGLKAGLVSSGNSLDYVERDMEIMREH 205
BLAST of mRNA_S-dermatodea_contig11000.665.1 vs. uniprot
Match: C1EA72_MICCC (PNP_UDP_1 domain-containing protein n=2 Tax=Micromonas TaxID=38832 RepID=C1EA72_MICCC) HSP 1 Score: 161 bits (407), Expect = 1.120e-46 Identity = 82/158 (51.90%), Postives = 110/158 (69.62%), Query Frame = 1
Query: 16 AEAAPLIERLGLVE-EPGKFPAAAPSKCFSGSYKDATISVVTNGKCDRFGVDQIGTVAAGLSTWLSVETLKPDLVINAGTAGGFVKHDTSIGDVFVSSRVRNHDRRIPIPGFKEFGVGDHESHPTPALLKELGFKHGVVTTGSSFDHTEMDDKMMEEN 486
AEAAPL+E LGL + EP FP P++ FSG+ DAT+ V NG+ FGVD +GTV A L+ + E LKPDL+INAGTAGGF +IGDV++++ +NHDRRIPIPGF +GVG ++ P PAL GFK GVV+TG+S D ++D + +++N
Sbjct: 15 AEAAPLVEHLGLKKAEPSPFPGPIPAEVFSGAVGDATVHVCCNGEAKGFGVDSVGTVPAALTAYQICEHLKPDLLINAGTAGGFKAMGGAIGDVYLATAFKNHDRRIPIPGFDAYGVGHADAAPCPALRLATGFKPGVVSTGNSLDAPDVDVESLKKN 172
BLAST of mRNA_S-dermatodea_contig11000.665.1 vs. uniprot
Match: A0A7S0S4A1_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S4A1_9CHLO) HSP 1 Score: 161 bits (408), Expect = 1.240e-46 Identity = 83/158 (52.53%), Postives = 109/158 (68.99%), Query Frame = 1
Query: 16 AEAAPLIERLGLV-EEPGKFPAAAPSKCFSGSYKDATISVVTNGKCDRFGVDQIGTVAAGLSTWLSVETLKPDLVINAGTAGGFVKHDTSIGDVFVSSRVRNHDRRIPIPGFKEFGVGDHESHPTPALLKELGFKHGVVTTGSSFDHTEMDDKMMEEN 486
AEA PLI RLGLV ++P K AP +SGS + VV NG+C GVD +GTV A LST+L+V+ KPDLVI+AGTAGGF SIGD+FVS+ V NHDRRIP+P F ++G+G + PTP ++ LG K GVVT+G+S D+T+ +M+E+
Sbjct: 31 AEAQPLITRLGLVKDDPPKVLQPAPCVTYSGSLGSLAVHVVWNGRCGTHGVDNVGTVPAALSTYLAVQAFKPDLVISAGTAGGFKSQGASIGDIFVSTHVVNHDRRIPLPSFDQYGLGKASTLPTPNMVTSLGLKTGVVTSGNSLDYTDKCMDIMKEH 188 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11000.665.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11000.665.1 >prot_S-dermatodea_contig11000.665.1 ID=prot_S-dermatodea_contig11000.665.1|Name=mRNA_S-dermatodea_contig11000.665.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=162bp MCLDAAEAAPLIERLGLVEEPGKFPAAAPSKCFSGSYKDATISVVTNGKCback to top mRNA from alignment at S-dermatodea_contig11000:4161..6089+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11000.665.1 ID=mRNA_S-dermatodea_contig11000.665.1|Name=mRNA_S-dermatodea_contig11000.665.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1929bp|location=Sequence derived from alignment at S-dermatodea_contig11000:4161..6089+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11000:4161..6089+ >mRNA_S-dermatodea_contig11000.665.1 ID=mRNA_S-dermatodea_contig11000.665.1|Name=mRNA_S-dermatodea_contig11000.665.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=972bp|location=Sequence derived from alignment at S-dermatodea_contig11000:4161..6089+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |