mRNA_S-dermatodea_contig10962.634.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10962.634.1 vs. uniprot
Match: D7FSG8_ECTSI (SF-assemblin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSG8_ECTSI) HSP 1 Score: 141 bits (355), Expect = 6.500e-40 Identity = 74/81 (91.36%), Postives = 80/81 (98.77%), Query Frame = 1
Query: 1 KTSRENTYAELRRVLDENVRSRMKGDEKFQSFVREELAALKNAVSVERQTRERDDGEIVDALNRYTSKLQSSLKIINSTEI 243
+TSRENTYA+LRR+LDENVRSRMKGDEKFQSFVREELA LK+AVS+ERQTRERDDGEIVDALNRYTSKLQSSLKIINS+EI
Sbjct: 190 RTSRENTYADLRRILDENVRSRMKGDEKFQSFVREELADLKSAVSLERQTRERDDGEIVDALNRYTSKLQSSLKIINSSEI 270
BLAST of mRNA_S-dermatodea_contig10962.634.1 vs. uniprot
Match: A0A7R9UAS1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAS1_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 4.860e-22 Identity = 53/81 (65.43%), Postives = 59/81 (72.84%), Query Frame = 1
Query: 1 KTSRENTYAELRRVLDENVRSRMKGDEKFQSFVREELAALKNAVSVERQTRERDDGEIVDALNRYTSKLQSSLKIINSTEI 243
+TSREN LR +ENVR R K DE FV+EELAALKNAVS E RER+D EIVDALNRYT KLQ SL+IINS +I
Sbjct: 227 RTSRENAVTALRTAFEENVRVRAKADEDLHRFVQEELAALKNAVSAEAVVREREDDEIVDALNRYTRKLQDSLQIINSPDI 307
BLAST of mRNA_S-dermatodea_contig10962.634.1 vs. uniprot
Match: A0A7S1CKK5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CKK5_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 5.110e-20 Identity = 45/77 (58.44%), Postives = 60/77 (77.92%), Query Frame = 1
Query: 10 RENTYAELRRVLDENVRSRMKGDEKFQSFVREELAALKNAVSVERQTRERDDGEIVDALNRYTSKLQSSLKIINSTE 240
RE Y EL+ LD+ VR+R K DEKFQ FV EE+AA++NA+ E + RE++D EIV+ LNRYT KLQ+SL+IINS++
Sbjct: 204 REKVYLELKTKLDDAVRTRTKADEKFQGFVSEEIAAIRNAIRKEEELREQEDDEIVETLNRYTQKLQASLQIINSSD 280
BLAST of mRNA_S-dermatodea_contig10962.634.1 vs. uniprot
Match: A0A024U8I8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U8I8_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 2.160e-17 Identity = 43/77 (55.84%), Postives = 57/77 (74.03%), Query Frame = 1
Query: 10 RENTYAELRRVLDENVRSRMKGDEKFQSFVREELAALKNAVSVERQTRERDDGEIVDALNRYTSKLQSSLKIINSTE 240
RE EL+ LD ++R++GD KFQ +EE+A ++N + E QTRER+D EI+DALNRYT+KLQ SLK+INSTE
Sbjct: 204 REVKATELKESLDMYTKTRLRGDGKFQHLAQEEIAKIQNLLVQESQTREREDDEIIDALNRYTAKLQDSLKLINSTE 280
BLAST of mRNA_S-dermatodea_contig10962.634.1 vs. uniprot
Match: A0A2P4YHF8_9STRA (SF-assemblin n=4 Tax=Phytophthora TaxID=4783 RepID=A0A2P4YHF8_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 2.730e-17 Identity = 40/77 (51.95%), Postives = 58/77 (75.32%), Query Frame = 1
Query: 10 RENTYAELRRVLDENVRSRMKGDEKFQSFVREELAALKNAVSVERQTRERDDGEIVDALNRYTSKLQSSLKIINSTE 240
RE Y+EL+ LD +R++GDE+F +F ++E+A ++NA+ E Q RER+D EIV+ALNRYT+KLQ SLK+I S +
Sbjct: 174 RELKYSELKNALDTYTATRIRGDERFHAFAQQEIAKIQNALVAEAQAREREDDEIVEALNRYTAKLQDSLKVITSPD 250
BLAST of mRNA_S-dermatodea_contig10962.634.1 vs. uniprot
Match: A0A482SDJ0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDJ0_9ARCH) HSP 1 Score: 77.8 bits (190), Expect = 3.020e-17 Identity = 36/71 (50.70%), Postives = 55/71 (77.46%), Query Frame = 1
Query: 31 LRRVLDENVRSRMKGDEKFQSFVREELAALKNAVSVERQTRERDDGEIVDALNRYTSKLQSSLKIINSTEI 243
++ +L+EN++ R K + KF +F E+ LKN VE++TRER+D EI++ALNRYT KLQ+SLK++NST++
Sbjct: 1 MKNILEENIKIRDKTESKFAAFFEREVNILKNDYRVEKETREREDDEIIEALNRYTIKLQNSLKVVNSTDM 71
BLAST of mRNA_S-dermatodea_contig10962.634.1 vs. uniprot
Match: W4GU67_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GU67_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 4.110e-17 Identity = 43/77 (55.84%), Postives = 57/77 (74.03%), Query Frame = 1
Query: 10 RENTYAELRRVLDENVRSRMKGDEKFQSFVREELAALKNAVSVERQTRERDDGEIVDALNRYTSKLQSSLKIINSTE 240
RE EL+ LD ++R++GD KFQ +EE+A ++N + E QTRER+D EI+DALNRYT+KLQ SLK+INSTE
Sbjct: 202 REVKATELKESLDMYTKTRLRGDGKFQLVAQEEIAKIQNLLVQESQTREREDDEIIDALNRYTAKLQDSLKLINSTE 278
BLAST of mRNA_S-dermatodea_contig10962.634.1 vs. uniprot
Match: A0A225V5R6_9STRA (SF-assemblin n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V5R6_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 2.050e-16 Identity = 40/73 (54.79%), Postives = 55/73 (75.34%), Query Frame = 1
Query: 10 RENTYAELRRVLDENVRSRMKGDEKFQSFVREELAALKNAVSVERQTRERDDGEIVDALNRYTSKLQSSLKII 228
RE Y+EL+ LD +R++GDEKF +F +EE+A ++NA+ E Q RER+D EIV+ALNRYT+KLQ SLK +
Sbjct: 199 RELKYSELKNALDTYTTTRIRGDEKFHAFAQEEIAKIQNALVAEAQAREREDDEIVEALNRYTAKLQDSLKTL 271
BLAST of mRNA_S-dermatodea_contig10962.634.1 vs. uniprot
Match: A0A2D4CBH6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBH6_PYTIN) HSP 1 Score: 82.0 bits (201), Expect = 2.190e-16 Identity = 39/76 (51.32%), Postives = 58/76 (76.32%), Query Frame = 1
Query: 10 RENTYAELRRVLDENVRSRMKGDEKFQSFVREELAALKNAVSVERQTRERDDGEIVDALNRYTSKLQSSLKIINST 237
RE Y++L+ LD +R++GDEKFQ+F +E++A+++NA+ E Q RER+D EI++ALNRYT+KLQ SLK+ T
Sbjct: 361 RELKYSDLKNALDTYTSTRIRGDEKFQAFAQEQIASIQNALVAEAQAREREDDEIIEALNRYTAKLQDSLKMATET 436
BLAST of mRNA_S-dermatodea_contig10962.634.1 vs. uniprot
Match: W7U5R8_9STRA (Sf n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5R8_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 2.710e-16 Identity = 43/81 (53.09%), Postives = 59/81 (72.84%), Query Frame = 1
Query: 1 KTSRENTYAELRRVLDENVRSRMKGDEKFQSFVREELAALKNAVSVERQTRERDDGEIVDALNRYTSKLQSSLKIINSTEI 243
+TSRE E+R+ LDE VR+R K D++FQ+FV EEL ALK ++ E R R+D EI++AL RYT+KLQ SLKI+N+ +
Sbjct: 223 RTSREAKIVEVRQSLDEFVRARKKVDDRFQAFVTEELGALKGELAREAAARAREDDEIIEALGRYTNKLQHSLKIVNAAAL 303 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10962.634.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10962.634.1 >prot_S-dermatodea_contig10962.634.1 ID=prot_S-dermatodea_contig10962.634.1|Name=mRNA_S-dermatodea_contig10962.634.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=82bp KTSRENTYAELRRVLDENVRSRMKGDEKFQSFVREELAALKNAVSVERQTback to top mRNA from alignment at S-dermatodea_contig10962:6676..7406- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10962.634.1 ID=mRNA_S-dermatodea_contig10962.634.1|Name=mRNA_S-dermatodea_contig10962.634.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=731bp|location=Sequence derived from alignment at S-dermatodea_contig10962:6676..7406- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10962:6676..7406- >mRNA_S-dermatodea_contig10962.634.1 ID=mRNA_S-dermatodea_contig10962.634.1|Name=mRNA_S-dermatodea_contig10962.634.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=492bp|location=Sequence derived from alignment at S-dermatodea_contig10962:6676..7406- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |