mRNA_S-dermatodea_contig10962.633.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig10962.633.1
Unique NamemRNA_S-dermatodea_contig10962.633.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig10962.633.1 vs. uniprot
Match: D7FSH0_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSH0_ECTSI)

HSP 1 Score: 774 bits (1998), Expect = 1.860e-271
Identity = 446/641 (69.58%), Postives = 489/641 (76.29%), Query Frame = 1
Query:    1 QIRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRAVRLRALVLLPSRDLAMQVHSVFERYARGTGLRVGLAIGQTNFLEEQLALVGEVALAGDPVATAKASFLRGQGRHTGPDLTKS-LPLDGRG-EFTSVQAGGASEVDILVATPGRLLDHXXXXXXXXXXXLRYLVIDEADRLLNQSYQGWVGKVIKAAYRREPGTAAPI------SGEAK----VGVVNSENDGRRAKP------------NDGTAA-------GIPRAEERPHAPS-----AVRLDPVTMRGRPLATGDRVRGPTVSTPPLRKLLFSATLTSNPQKLAGLDVVNPLIYTAKETVRTTGRRGRTSGAVDGGGEEHESRRPSQETRRSNLDEIGGDGKGKGQYSTPATLEETYTVCDSQAKPLVLLSLLRETLGRRKGLSVVFTSSVDSTHRLFRLLQLFGGFE---GSDAAGGENGNXXXXXXXXXXS--------GVAEFSSSLGQRQRSHIIRRARAGDVRVIVCSDGMARGMDLEGVGLVVNYDVPSQAKTYVHRVGRTARAGLRGVAVTIAKKGQVKQFLQMRAGVDRKRVRLDASPADQSRILLLAGRYQRCLKDLKEVLEAERAGDLDPTASVTAVDA 1782
            Q+RVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRR VRLRALVLLPSRDLAMQVHSVF++YARGTGLRVGLAIGQTNFLEEQLALVG VALAG+P ATA+ASFLR QGR   P+ T     LD  G   T   AGG+SEVDI+VATPGRLLDH           LRYL+IDEADRLLNQSYQGWVGKVIKAAYR+EPGTAAP+      +G  K     G   +E+D  R +             N+G+ +       G+    +RP  PS     A  LDPVT+RGRPLATG+R+RG TVSTPPLRKLLFSATLT+NPQKLAGLDVVNPLIYTA E     G + R +   DG        RPSQETRRSNLD IG   +G G++STPATLEETYTVCDSQAKPLVLLSLLRE +GR+  LSVVFTSSVDSTHRLFRLLQLFGGFE   G+DA GG                       GVAEFSSSLGQRQRS IIRRARAG VRVIVCSDGMARGMDL+GVGLVVNYDVPSQAKTYVHRVGRTARAG RG AVTI KKGQVKQFL MR+G+D+KRVRLD+SPADQSR+L LAGRYQ CLKDLKEV+EAER G+LDP+A VTA ++
Sbjct:  203 QVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRVVRLRALVLLPSRDLAMQVHSVFKKYARGTGLRVGLAIGQTNFLEEQLALVGPVALAGNPTATARASFLRAQGRAIRPNPTMGGSNLDSGGWSGTGAPAGGSSEVDIVVATPGRLLDHLTQTPGFTLQHLRYLIIDEADRLLNQSYQGWVGKVIKAAYRKEPGTAAPVYERFTFNGGGKRNDVSGGAGAEDDDSRGQQQPQDVEKAQECDNNGSNSVSSQQQLGVTGVGKRPRPPSRRPPSAFSLDPVTVRGRPLATGERIRGATVSTPPLRKLLFSATLTNNPQKLAGLDVVNPLIYTATEFSTAAGGQRRETSGADG------DPRPSQETRRSNLDGIGTAVEGGGRFSTPATLEETYTVCDSQAKPLVLLSLLREMVGRQADLSVVFTSSVDSTHRLFRLLQLFGGFERTAGTDAEGGGGDGDTHLPDDAIHGDGNDDGDGGVAEFSSSLGQRQRSSIIRRARAGAVRVIVCSDGMARGMDLDGVGLVVNYDVPSQAKTYVHRVGRTARAGSRGTAVTITKKGQVKQFLNMRSGIDKKRVRLDSSPADQSRLLPLAGRYQLCLKDLKEVMEAERTGELDPSAPVTATES 837          
BLAST of mRNA_S-dermatodea_contig10962.633.1 vs. uniprot
Match: A0A835YS10_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS10_9STRA)

HSP 1 Score: 444 bits (1142), Expect = 7.060e-144
Identity = 299/649 (46.07%), Postives = 356/649 (54.85%), Query Frame = 1
Query:    4 IRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRAVRLRALVLLPSRDLAMQVHSVFERYARGTGLRVGLAIGQTNFLEEQLALVGEVALAGDPVATAKASFLRGQGRHTGPDLTKSLPLDGRGEFTSVQAGGASEVDILVATPGRLLDHXXXXXXXXXXXLRYLVIDEADRLLNQSYQGWVGKVIKAAYRREPGT------AAPISGEAKVGVVNSENDGRRAKPNDGTAAGIPRAEERPHAPSAVR----------LDPVTMRGRPLATGDRVRGPTVSTPPLRKLLFSATLTSNPQKLAGLDVVNPLIYTAKETVRTTGRRGRTSGAVDGGGEEHESRRPSQETRRSNLD-EIGGDGKGKGQYSTPATLEETYTVCDSQAKPLVLLSLLRETLGRRKG-LSVVFTSSVDSTHRLFRLLQLFGGFEGSDAAGGENGNXXXXXXXXXXSGVAEFSSSLGQRQRSHIIRRARAGD------------------------------------VRVIVCSDGMARGMDLEGVGLVVNYDVPSQAKTYVHRVGRTARAGLRGVAVTIAKKGQVKQFLQMRAGVDRKRV--RLDASPADQSRILLLAGRYQRCLKDLKEVLEAERAGDLDPTASVTAVDA 1782
            + VVPDI+AT RHSHVQ+RD+CV APTGSGKTLV+VLGV+QAL+ RR  RLRAL LLPSRDLA QVH VF  Y  GTGLRVGLAIGQ+N L+EQL+LVG  AL+  PVA A+A      G  +G           RG   +V  GG SEVDILVATPGRLLDH           L YLV+DEADRLLNQSYQ WVG+V++AAYR   G+      ++PIS  +                                                + P T+RGRP A   RV GP  +T PLRKLLFSATLT+NPQKLA L + NP+ YTA+E     GR                   P Q T R  L+   GGDG+    YSTPA+L E   +C +  KPL+LL+LL    G   G L+VVF SSVDSTHRL RLLQLFG                           AEFSS+L Q+QR+                                              + V+VCSDGMARGMD+ GVG VVNYD P+ A+TYVHRVGRTARAG  G+AVT+ K+GQV QF  MRA V+   V    +A P D      LA RY+RCL++L  VLEAE+ G+L   A V A+D+
Sbjct:   74 VSVVPDIMATARHSHVQARDVCVGAPTGSGKTLVYVLGVVQALLPRRVRRLRALALLPSRDLATQVHGVFTTYCTGTGLRVGLAIGQSNLLDEQLSLVGTTALSNSPVAAARAWV----GGKSGGLRAPPAGAFARGMSAAVPLGGVSEVDILVATPGRLLDHLEQTPGFTLQHLMYLVVDEADRLLNQSYQDWVGRVLEAAYRAREGSVTCGSSSSPISNPSVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQPTTVRGRPGAAEGRVTGPIAATLPLRKLLFSATLTNNPQKLASLGLANPVFYTARE-----GRGXXXXXXXXXXXXXGSVAAPEQRTDRFTLEARDGGDGEAADAYSTPASLTERTLLCAAAEKPLLLLALLLR--GPVHGVLTVVFASSVDSTHRLARLLQLFG------------------------VAAAEFSSALSQKQRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSVVVCSDGMARGMDIAGVGCVVNYDAPTHARTYVHRVGRTARAGRAGLAVTLLKRGQVGQFAAMRAKVNAVEVPGMAEAPPTDG-----LAARYRRCLRELAAVLEAEKRGELGAAAPVGALDS 682          
BLAST of mRNA_S-dermatodea_contig10962.633.1 vs. uniprot
Match: A0A7S3V688_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V688_9STRA)

HSP 1 Score: 350 bits (898), Expect = 1.710e-107
Identity = 246/626 (39.30%), Postives = 333/626 (53.19%), Query Frame = 1
Query:    1 QIRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRAVRLRALVLLPSRDLAMQVHSVFERYARGTGLRVGLAIGQTNFLEEQLALVGEVALAG-DPVATAKASFLRGQGRHTGPDLTKSLPLDGRGEFTSVQAGGA--------------------SEVDILVATPGRLLDHXXXXXXXXXXXLRYLVIDEADRLLNQSYQGWVGKVIKAAYRREPGTAAPISGEAKVGVVNSENDGRRAKPNDGTAAGIPRAEERPHAPSAVRLDPVTMRGRPLATGDRVRGPTVSTP-----PLRKLLFSATLTSNPQKLAGLDVVNPLIYTAKETVRTTGRRGRTSGAVDGGGEEHESRRPSQETRRSNLDEIGGDGKGKGQYSTPATLEETYTVCDSQAKPLVLLSLLRET------LGRRKGLSVVFTSSVDSTHRLFRLLQLFGGFEGSDAAGGENGNXXXXXXXXXXSGVAEFSSSLGQRQRSHIIRRAR-----AGDVRVIVCSDGMARGMDLEGVGLVVNYDVPSQAKTYVHRVGRTARAGLRGVAVTIAKKGQVKQFLQMRAGVDRKRVRLDASPADQSRILLLAGRYQRCLKDLKEVLEAERAGDLDPTASV 1767
            Q  V+PD++A+ERH+H+++RDICV+APTGSGKTL FVL VL +L  RR  RLRALV+LPSRDLA QV  VF+RY++G+ L +GLAIGQT+F  EQ +L+ E  + G  P    +  +       +  + TK+   D  G+ + V  GG                     S VD+LV TPGRL+DH           LR+L+ DEADRL+NQ YQ W+ +V++AA      +A P         +N ++ G +                        +LDPVT R R +   D     T  T       LRKLLFSATLT +P+KLA L +VNP  + A           + S + D     H +                        YS P  L E    C+++ KPLVL++ L E        G+  G+ VVFTSSVDSTHRL RLLQLF        A G+ G           S V EFSS+L Q+QRS +++R          VRV+VCSDGM+RGMD+  +  V+NYDVPS AKTYVHR GRTARAG  G A+TI K GQV +FL+MR  +D+ +  ++ +   +  +  +   Y+ C+K LK V++AE   +L P A++
Sbjct:  203 QALVIPDVIASERHAHIRNRDICVAAPTGSGKTLSFVLPVLNSLANRRIKRLRALVVLPSRDLAAQVFKVFQRYSKGSDLSIGLAIGQTDFEAEQSSLIFEKKMIGFQPREEYRCQYALKP--FSVKNATKAYSFDAPGDKSDVSLGGCWAHGDLKDFPDLCDTPIGGKSAVDVLVCTPGRLIDHLDKTPGFTLQHLRFLIADEADRLVNQGYQDWIRRVVEAA------SAGPDRS------LNMDSCGLQ------------------------KLDPVTWR-RGIDANDSNHANTQDTNVCRSVQLRKLLFSATLTKDPRKLASLGLVNPKYFDAHSL------NNKVSASQDANTPNHST------------------------YSLPGGLSEFMVECNAEQKPLVLMAFLLEQGLLDKGEGQTNGIVVVFTSSVDSTHRLARLLQLFW-------ASGKYG---------PTSCVGEFSSALPQKQRSQLMKRCNNTTDDPSRVRVVVCSDGMSRGMDISSITAVINYDVPSFAKTYVHRCGRTARAGRSGRAITIMKSGQVARFLKMRQLIDKPQ-NVEKAGIKKELVNSIVPIYKICVKALKRVMDAEEDNELSPVATL 742          
BLAST of mRNA_S-dermatodea_contig10962.633.1 vs. uniprot
Match: M4B1B7_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B1B7_HYAAE)

HSP 1 Score: 313 bits (803), Expect = 1.810e-95
Identity = 216/587 (36.80%), Postives = 297/587 (50.60%), Query Frame = 1
Query:    1 QIRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRAVRLRALVLLPSRDLAMQVHSVFERYARGTGLRVGLAIGQTNFLEEQLALVGEVALAGDPVATAKASFLRGQGRHTGPDLTKSLPLDGRGEFTSVQAGGASEVDILVATPGRLLDHXXXXXXXXXXXLRYLVIDEADRLLNQSYQGWVGKVIKAAYRREPGTAAPISGEAKVGVVNSENDGRRAKPNDGTAAGIPRAEERPHAPSAVRLDPVTMRGRPLATGDRVRGPTVSTPPLRKLLFSATLTSNPQKLAGLDVVNPLIYTAKETVRTTGRRGRTSGAVDGGGEEHESRRPSQETRRSNLDEIGGDGKGKGQYSTPATLEETYTVCDSQAKPLVLLSLLRETLGRRKGLSVVFTSSVDSTHRLFRLLQLFGGFEGSDAAGGENGNXXXXXXXXXXSGVAEFSSSLGQRQRSHIIRRARAGDVRVIVCSDGMARGMDLEGVGLVVNYDVPSQAKTYVHRVGRTARAGLRGVAVTIAKKGQVKQFLQMRAGVDRKRVRLDASPADQSRILLLAGRYQRCLKDLKEVLEAERAGDLDPTA 1761
            Q   +P I+A+   ++ +  DIC+SAPTGSGKTL +V+ ++Q L+ R   R+RAL+++PSRDLA+QVH++ + + + T L  GLA+GQ+NF+ EQ ALVG+  ++G  V  A                                 GG S VDI+VATPGRL+DH           L+  V+DEADRLL+QSYQ W+ KV  + +  +      ++GEA  GV                                 R D +  R        R+R P      L ++L SATLT NP+KLA + + N  + T            + S   D             E  +    E+    K   +YSTP  L+E +  CD+ +KPL+LL LL E  G    LS++FT+SV STHRL RLLQL+                           + EFSSSL Q+QRS ++   +AG V  +VCSD MARGMD+E +  V+NYDVPS  KTY+HRVGRTARAG  G  VT+ K GQ+K  ++M    D  +  L   P  Q  +  L  RY   L+ LKE L+AE+AG+L  T+
Sbjct:   46 QAVAIPKILAS---TNDRVTDICISAPTGSGKTLTYVVPIVQRLLSRVVCRVRALIVVPSRDLAVQVHAIVQAFCQNTPLTCGLAVGQSNFVVEQRALVGDCHVSGQDVKDA-------------------------------MHGGQSAVDIVVATPGRLVDHLEQTRGFTLQHLQLFVVDEADRLLSQSYQDWIAKVYSSVFAGQEVDDDVLAGEA-CGVTWR------------------------------RQDSIDRR--------RIRTP------LTRVLLSATLTRNPRKLAAIGMSNAELTTIGRIDDPLADNAKQSTVGDS----------DNEDEKEGSKEVASSAK---RYSTPKNLDEYWIECDTGSKPLILLELLSEFAG---SLSIIFTASVSSTHRLARLLQLYS---------------------THPERIREFSSSLSQKQRSTLVADCKAGRVDTVVCSDAMARGMDIEDIANVINYDVPSFVKTYIHRVGRTARAGRHGRCVTLVKMGQMKGMMRMLKKADTNK--LKPYPLQQDHVKSLVPRYTEALQRLKETLDAEKAGELQVTS 514          
BLAST of mRNA_S-dermatodea_contig10962.633.1 vs. uniprot
Match: D0MZI2_PHYIT (DEAD/DEAH box RNA helicase, putative n=13 Tax=Phytophthora TaxID=4783 RepID=D0MZI2_PHYIT)

HSP 1 Score: 310 bits (794), Expect = 3.190e-94
Identity = 234/588 (39.80%), Postives = 308/588 (52.38%), Query Frame = 1
Query:    1 QIRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRAVRLRALVLLPSRDLAMQVHSVFERYARGTGLRVGLAIGQTNFLEEQLALVGEVALAGDPVATAKASFLRGQGRHTGPDLTKSLPLDGRGEFTSVQAGGASEVDILVATPGRLLDHXXXXXXXXXXXLRYLVIDEADRLLNQSYQGWVGKVIKAAYRREPGTAAPISGEAKVGVVNSENDGRRAKPNDGTAAGIPRAEERPHAPSAVRLDPVTMRGRPLATGDRVRGPTVSTPPLRKLLFSATLTSNPQKLAGLDVVNPLIYTAKETVRTTGRRGRTSGAVDGGGEEHESRRPSQETRRSNLDEIGGDGKG-KGQYSTPATLEETYTVCDSQAKPLVLLSLLRETLGRRKGLSVVFTSSVDSTHRLFRLLQLFGGFEGSDAAGGENGNXXXXXXXXXXSGVAEFSSSLGQRQRSHIIRRARAGDVRVIVCSDGMARGMDLEGVGLVVNYDVPSQAKTYVHRVGRTARAGLRGVAVTIAKKGQVKQFLQMRAGVDRKRVRLDASPADQSRILLLAGRYQRCLKDLKEVLEAERAGDLDPTA 1761
            Q   +P I+A++     +  DIC+SAPTGSGKTL +V+ ++Q L+ R   R+RAL++LPSRDLA+QVH + +++ +GT L+ GLAIGQ+NF  EQ ALVG  A +G+ V                                +   GG S VDILVATPGRL+  XXXXXXXXXXXL+ +++DEADRLLNQSYQ W+ KV  + +  +                  E D       DG   G+          +  R D +  R        R+R P      L ++L SATLT NP+KLA + + N  +              +   A D   E                DE G +  G K  YSTP  L+E +  CD+ +KPLVLL LL E  G    LS+VFT+SV+STHRL RLLQL+                           + EFSSSL Q+QRS ++   +AG V  +VCSD MARGMD+E V  VVNYDVPS  KTY+HRVGRTARAG  G  VT+ K GQ+K  ++M    D  +++  A    Q  +  L  RY   L+ LK+ LEAE+AG L  T+
Sbjct:   49 QAVAIPKILASDSD---RVTDICISAPTGSGKTLTYVVPIVQRLLPRVVCRVRALIVLPSRDLAVQVHQIVQQFVQGTPLKCGLAIGQSNFAAEQNALVG--ATSGNKVI-------------------------------ATTDGGRSLVDILVATPGRLVXXXXXXXXXXXXXLQIMIVDEADRLLNQSYQDWISKVYASVFNGQ------------------EVD------EDGLTLGV--------GVTCRRQDSINRR--------RIRTP------LTRVLLSATLTRNPRKLAAIGMSNAELTKIGRIDDPLADNAKLGNAGDSDDE----------------DEDGDEATGSKKMYSTPTNLDEYWIECDTGSKPLVLLELLSEFAG---SLSIVFTASVNSTHRLARLLQLYS---------------------THPERIREFSSSLSQKQRSSLVADCKAGRVETVVCSDAMARGMDIEDVANVVNYDVPSFIKTYIHRVGRTARAGRHGRCVTLVKLGQMKSMMRMLKKADNNKLKPYA--LQQEHMKTLVPRYTEALQQLKDTLEAEKAGKLQATS 512          
BLAST of mRNA_S-dermatodea_contig10962.633.1 vs. uniprot
Match: K0SZ73_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SZ73_THAOC)

HSP 1 Score: 314 bits (805), Expect = 1.880e-93
Identity = 245/652 (37.58%), Postives = 330/652 (50.61%), Query Frame = 1
Query:    1 QIRVVPDIVATERHSHVQ-SRDICVSAPTGSGKTLVFVLGVLQALI-------RRRAVRLRALVLLPSRDLAMQVHSVFERYARGTGLRVGLAIG----QTNFLEEQLALVGEVA-----------------LAGDPVATAKASFLRGQGRHTGPDLTKSLPL---DGRGEFTSV-----QAGGASEVDILVATPGRLLDHXXXXXXXXXXXLRYLVIDEADRLLNQSYQGWVGKVIKAAYRREPGTAAPISGEAKVGVVNSENDGRRAKPNDGTAAGIPRAEERPHAPSAVRLDPVTMR-----------GRPLATGDRVRGPTVSTP-PLRKLLFSATLTSNPQKLAGLDVVNPLIYTAKETVRTTGRRGRTSGAVDGGGEEHESRRPSQETRRSNLDEIGGDGKGKGQYSTPATLEETYTVCDSQAKPLVLLSLLRETLGRRK---------GLSVVFTSSVDSTHRLFRLLQLFGGFEGSDAAGGENGNXXXXXXXXXXSGVAEFSSSLGQRQRSHIIRRARAG-----DVRVIVCSDGMARGMDLEGVGLVVNYDVPSQAKTYVHRVGRTARAGLRGVAVTIAKKGQVKQFLQMRAGVDRKRVRLDASPADQSRILLLAGRYQRCLKDLKEVLEAERAGDLDPTASV 1767
            Q  V+PD++ +ER+SH++ +RD+C  +PTGSGKTL FVL +L AL         R   RLRALV+LPSRDLA QVH VF RY++G+ +++GLA+G    +T+   E+ +LV E                    +G P+  A A       RH+    + S  L   DGRG   S      +  G S VDILV TPGRL+DH           LR++VIDEADRL+NQ YQ W+ +V++A+                    NSEN       +      I +            +DPVT R           G    T   + G T+  P PLRKLLFSATLT +PQKLA L + NP  Y A    +                  H+S   ++E +              G+Y  P  L E+   C ++ KPLVLL+LL +   + K          L++VFTSSVDSTHRL RLLQL        AAGG              S VAE+SSS+  +QR+ I+RR R+       V V+VCSDGMARGMDL  VG+V+NYDVPS AKTY+HR GRTAR    G A+ + K GQV +F +MR+ +D     +      +  +      Y+ C+K L++V+ AE   D+ P++SV
Sbjct:  201 QCMVIPDVIESERNSHLRGARDVCCHSPTGSGKTLAFVLPILTALHDGTSCGGARGLRRLRALVVLPSRDLARQVHGVFMRYSKGSRIKIGLAVGGGRKRTDLTNERRSLVVESQHESTGHYKEDDGTVIRRRSGGPLEEANARV-----RHSFDPTSISEALSAFDGRGSKDSCFEATPKICGISAVDILVCTPGRLVDHLDSTPGFTLQHLRFIVIDEADRLVNQPYQNWIRRVLQAS--------------------NSENCFEPLNLDMSFREYIRQPLRTAPDGQTFNIDPVTHRIAGSGAAHSLLGDSNTTESGLIGGTIGRPVPLRKLLFSATLTQDPQKLARLGLDNPKHYDANYLKK------------------HQSGSATEEAKA-------------GKYFLPVGLRESMVECTAEQKPLVLLALLLDERRQHKMVESSEQAADLTIVFTSSVDSTHRLARLLQLLW------AAGGYG----------LPSHVAEYSSSIDTKQRAAILRRCRSSLGENEKVSVLVCSDGMARGMDLPSVGVVINYDVPSFAKTYIHRCGRTARCXXTGRAINVLKGGQVNKFRKMRSLIDGGADAVHEGSVKKDLVKGALPLYKACVKALQKVITAENDEDMGPSSSV 780          
BLAST of mRNA_S-dermatodea_contig10962.633.1 vs. uniprot
Match: A0A6A3MZZ4_9STRA (ATP-dependent RNA helicase n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MZZ4_9STRA)

HSP 1 Score: 306 bits (783), Expect = 1.300e-92
Identity = 233/590 (39.49%), Postives = 309/590 (52.37%), Query Frame = 1
Query:    1 QIRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRAVRLRALVLLPSRDLAMQVHSVFERYARGTGLRVGLAIGQTNFLEEQLALVGEVALAGDPVATAKASFLRGQGRHTGPDLTKSLPLDGRGEFTSVQAGGASEVDILVATPGRLLDHXXXXXXXXXXXLRYLVIDEADRLLNQSYQGWVGKVIKAAYRREPGTAAPISGEAKVGVVNSENDGRRAKPNDGTAAGIPRAEERPHAPSAVRLDPVTMRGRPLATGDRVRGPTVSTPPLRKLLFSATLTSNPQKLAGLDVVNP---LIYTAKETVRTTGRRGRTSGAVDGGGEEHESRRPSQETRRSNLDEIGGDGKGKGQYSTPATLEETYTVCDSQAKPLVLLSLLRETLGRRKGLSVVFTSSVDSTHRLFRLLQLFGGFEGSDAAGGENGNXXXXXXXXXXSGVAEFSSSLGQRQRSHIIRRARAGDVRVIVCSDGMARGMDLEGVGLVVNYDVPSQAKTYVHRVGRTARAGLRGVAVTIAKKGQVKQFLQMRAGVDRKRVRLDASPADQSRILLLAGRYQRCLKDLKEVLEAERAGDLDPTA 1761
            Q   +P I+A++     +  DIC+SAPTGSGKTL +V+ ++Q L+ R   R+RAL++LPSRDLA+QVH + + + + T L+ GLAIGQ+NF  EQ ALVG+++  G+  A+A                                 GG S VDILVATPGRL+  XXXXXXXXXXXL+ +++DEADRLLNQSYQ W+ KV  + +  +               V+ E          G A G+          +  R D +  R        R+R P      L ++L SATLT NP+KLA + + N     I    + +    ++G      DG                   +E  G  K    YSTP  LEE +  CD+ +KPLVLL LL E  G    LS+VFT+SV+STHRL RLLQL                            + EFSSSL Q+QRS ++   +AG V  +VCSD MARGMD++ V  VVNYDVPS  KTY+HRVGRTARAG  G +VT+ K GQ+K  ++M    D  +  L   P  Q  +  L  RY   L+ LK+ LEAE+AG L  T+
Sbjct:   51 QAVAIPKILASDSD---RVTDICISAPTGSGKTLTYVVPIVQRLLPRVVCRVRALIVLPSRDLAVQVHQIVQHFVKDTPLKCGLAIGQSNFAVEQSALVGDIS--GEKGASATD-------------------------------GGRSLVDILVATPGRLVXXXXXXXXXXXXXLQIMIVDEADRLLNQSYQDWISKVYASVFNGQE--------------VDEE----------GLALGV--------GVTCRRQDSINRR--------RIRTP------LTRVLLSATLTRNPRKLAVIGMSNAELTKIGRIDDPLADNAKQGTDDDEEDG-------------------EEASGSAK---MYSTPTNLEEYWIECDTGSKPLVLLELLSEFAG---ALSIVFTASVNSTHRLARLLQLHS---------------------THPERIREFSSSLSQKQRSGLVADCKAGRVETVVCSDAMARGMDIDDVANVVNYDVPSFIKTYIHRVGRTARAGGHGRSVTLVKMGQMKGMMRMLKKADNNK--LKPYPLQQEHMKTLVPRYTEALQRLKDTLEAEKAGKLQATS 510          
BLAST of mRNA_S-dermatodea_contig10962.633.1 vs. uniprot
Match: H3GNQ4_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GNQ4_PHYRM)

HSP 1 Score: 306 bits (783), Expect = 1.340e-92
Identity = 231/588 (39.29%), Postives = 307/588 (52.21%), Query Frame = 1
Query:    1 QIRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRAVRLRALVLLPSRDLAMQVHSVFERYARGTGLRVGLAIGQTNFLEEQLALVGEVALAGDPVATAKASFLRGQGRHTGPDLTKSLPLDGRGEFTSVQAGGASEVDILVATPGRLLDHXXXXXXXXXXXLRYLVIDEADRLLNQSYQGWVGKVIKAAYRREPGTAAPISGEAKVGVVNSENDGRRAKPNDGTAAGIPRAEERPHAPSAVRLDPVTMRGRPLATGDRVRGPTVSTPPLRKLLFSATLTSNPQKLAGLDVVNPLIYTAKETVRTTGRRGRTSGAVDGGGEEHESRRPSQETRRSNLDEIGGDGKGKGQ-YSTPATLEETYTVCDSQAKPLVLLSLLRETLGRRKGLSVVFTSSVDSTHRLFRLLQLFGGFEGSDAAGGENGNXXXXXXXXXXSGVAEFSSSLGQRQRSHIIRRARAGDVRVIVCSDGMARGMDLEGVGLVVNYDVPSQAKTYVHRVGRTARAGLRGVAVTIAKKGQVKQFLQMRAGVDRKRVRLDASPADQSRILLLAGRYQRCLKDLKEVLEAERAGDLDPTA 1761
            Q   +P ++A++     +  DIC+SAPTGSGKTL +V+ ++Q L+ R   R+RAL++LPSRDLA+QVH + +++ R T L+ GLAIGQ+NF  EQ ALVG+++  GD V+                               S   GG S VDILVATPGRL+  XXXXXXXXXXXL+ +++DEADRLLNQSYQ W+ KV  + +  +               V+ E          G A G+          +  R D +  R        R+R P      L ++L SATLT NP+KLA + + N  +              +   A D   E                DE G D     + YSTP  L+E +  CD+ +KPLVLL LL E  G    LS+VFT+SV+STHRL RLLQL+                           + EFSS L Q+QRS ++   +AG V  +VCSD MARGMD++ V  VVNYDVPS  KTY+HRVGRTARAG  G +VT+ K GQ K  ++M    D  +  L   P  Q  +  L  RY   L+ LK+ LEAE+AG +  T+
Sbjct:   45 QAVAIPKLLASDSD---RVTDICISAPTGSGKTLTYVVPIVQRLLPRVVCRVRALIVLPSRDLAVQVHQIVQQFCRHTPLKCGLAIGQSNFAVEQAALVGDIS--GDKVS-------------------------------STTDGGRSLVDILVATPGRLVXXXXXXXXXXXXXLQIMIVDEADRLLNQSYQDWIAKVYASVFNGQE--------------VDEE----------GLALGV--------GVTCRRQDSINRR--------RIRTP------LTRVLLSATLTRNPRKLAAIGMSNAELTKIGRIDDPLADNAKLGTAGDSDEE----------------DEEGEDASASNKMYSTPTNLDEFWIECDTGSKPLVLLELLSEFGG---ALSIVFTASVNSTHRLARLLQLYSSHP---------------------ERIREFSSGLSQKQRSALVADCKAGRVETVVCSDAMARGMDIDDVANVVNYDVPSFIKTYIHRVGRTARAGRHGRSVTLVKMGQTKGMMRMLKKADSNK--LKPYPLQQEHMKTLIPRYTAALQQLKDTLEAEKAGRIQATS 508          
BLAST of mRNA_S-dermatodea_contig10962.633.1 vs. uniprot
Match: A0A5D6XXH1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXH1_9STRA)

HSP 1 Score: 306 bits (785), Expect = 2.400e-92
Identity = 232/572 (40.56%), Postives = 299/572 (52.27%), Query Frame = 1
Query:   61 DICVSAPTGSGKTLVFVLGVLQALIRRRAVRLRALVLLPSRDLAMQVHSVFERYARGTGLRVGLAIGQTNFLEEQLALVGEVALAGDPVATAKASFLRGQGRHTGPDLTKSLPLDGRGEFTSVQAGGASEVDILVATPGRLLDHXXXXXXXXXXXLRYLVIDEADRLLNQSYQGWVGKVIKAAYRREPGTAAPISGEAKVGVVNSENDGRRAKPNDGTAAGIPRAEERPHAPSAVRLDPVTMRGRPLATGDRVRGPTVSTPPLRKLLFSATLTSNPQKLAGLDVVNP---LIYTAKETVRTTGRRGRTSGAVDGGGEEHESRRPSQETRRSNLDEIGGDGKGKGQYSTPATLEETYTVCDSQAKPLVLLSLLRETLGRRKGLSVVFTSSVDSTHRLFRLLQLFGGFEGSDAAGGENGNXXXXXXXXXXSGVAEFSSSLGQRQRSHIIRRARAGDVRVIVCSDGMARGMDLEGVGLVVNYDVPSQAKTYVHRVGRTARAGLRGVAVTIAKKGQVKQFLQMRAGVDRKRVRLDASPADQSRILLLAGRYQRCLKDLKEVLEAERAGDLDPTASV 1767
            D+CV+APTGSGKTL +V+ ++Q L+ R   R+RALV+LPSRDL +QVH+V   +  GT LRVG+AIGQ+NF  EQ ALVG       PV  A A F                     G     + GG S VDILVATPGRL+  XXXXXXXXXXXL+ LV+DEADRLLNQSYQ W+ K+  + +R + G                        P  G   G            A  L P T R +      R+R P      L ++L SATLT NP+KLA + + N     I  A + +    R        +GGG+             S          G   Y+TP+ LEE    CD+ +KPLVLL +L    G    L++VFT+SV++THRL RLLQL                          + V E+SSSL Q+QRS ++   RA  V V+VCSD MARGMD++ V  VVNYDVP+  KTY+HRVGRTARAG  G +VT+ K GQ+K   +M    +  R  L   P  +  +  L  RY R L+ LK  L+AE+AG L  T+++
Sbjct:   86 DVCVNAPTGSGKTLAYVVPIVQRLLPRVVCRVRALVVLPSRDLVLQVHAVLSTFCAGTPLRVGIAIGQSNFAAEQAALVG-------PVDHAHALF---------------------GNSAGERDGGRSLVDILVATPGRLVXXXXXXXXXXXXXLQILVVDEADRLLNQSYQDWIPKIYASIFRGQDGP-----------------------PLQGAGGG------------AFPLAPTTSRRQDAINRRRIRTP------LTRVLLSATLTRNPRKLASIGMSNAELTKIGRADDVLADNAR--------EGGGDXXXXXXXXXXXXXS----------GAALYATPSNLEEFVVECDAGSKPLVLLEVLSAYAG---ALTIVFTASVNATHRLARLLQL---------------------CADDPARVREYSSSLTQKQRSALVAECRANRVEVVVCSDAMARGMDIDNVANVVNYDVPTFIKTYIHRVGRTARAGRAGRSVTLVKTGQMKALTRMLKKAENNR--LAPFPLRKEHMKTLVPRYTRALEQLKRTLDAEKAGKLSATSTL 544          
BLAST of mRNA_S-dermatodea_contig10962.633.1 vs. uniprot
Match: A0A7S4QRG8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QRG8_9STRA)

HSP 1 Score: 305 bits (781), Expect = 6.000e-92
Identity = 229/619 (37.00%), Postives = 305/619 (49.27%), Query Frame = 1
Query:   94 KTLVFVLGVLQALIRRRAVRLRALVLLPSRDLAMQVHSVFERYARGTGLRVGLAIGQTNFLEEQLALV-----------------GEVALAGDPVATAKASFLRGQGRHTGPDLTKSLPLDGRGEFTSVQAGGASEVDILVATPGRLLDHXXXXXXXXXXXLRYLVIDEADRLLNQSYQGWVGKVIKAAYRREPGTAAPISGEAKVGVVNSENDGRRAKPNDGTAAGIPRAEERPHAPSAVRLDPVTMRGRPLA----------TGDRVRGPTVSTPPLRKLLFSATLTSNPQKLAGLDVVNPLIYTAKET-VRTTGRRGRTSGAVDGGGEEHESRRPSQETRRSNLDEIGGDGKGKGQYSTPATLEETYTVCDSQAKPLVLLSLLRETLGRR------KGLSVVFTSSVDSTHRLFRLLQLFGGFEGSDAAGGENGNXXXXXXXXXXSGVAEFSSSLGQRQRSHIIRRARAG--------------------------DVRVIVCSDGMARGMDLEGVGLVVNYDVPSQAKTYVHRVGRTARAGLRGVAVTIAKKGQVKQFLQMRAGVDRKRVRLDASPADQSRILLLAGRYQRCLKDLKEVLEAERAGDLDPTASVT 1770
            KTL FVL VL +L  R   RLRALV+LPSRDLA QV++VF+RY +G+ L VGLAIGQ +F  EQ +LV                  ++  A DP+ T  A  +                ++   +  S+   G S VD+LVATPGRL+DH           LR+LVIDEADRL+NQSYQ W+G+V++AA       A+        GV ++  DG  A         + R E      S + LDP+T R   +           T   V      T PLRKLLFSATLT +PQKLA L +VNP  + A    VRT                                ++   + + + +YS P  L E    C +Q KPLVLL+LL E            G+ VVFT+S+DSTHRL RLLQ+     G  +A                S VAEFSS+L Q+QR  ++RR                               + V+VCSDGM+RGMD+  V  V+NYDVP  AKTYVHR GRTARAG +G A+++ K GQV +F +MR  +DR   R++     +  +  +   YQ C++ L+ V++AE  G+LD  A +T
Sbjct:    1 KTLGFVLPVLNSLSTRVVKRLRALVVLPSRDLASQVYNVFDRYTQGSDLCVGLAIGQKDFATEQKSLVLGDDNAGLCSSSYDHDTAQIQYALDPINTHSALEI----------FDYDADINVTSKKCSLPRAGRSAVDVLVATPGRLMDHIEKTPGFTLQHLRFLVIDEADRLVNQSYQNWIGRVMRAA-----SAASAFDSCGDSGVNDNNKDGHSA---------VTRLETASDRTSLI-LDPITWRKGGMDGTSFDTNATNTASFVPAAVCQTVPLRKLLFSATLTKDPQKLASLGLVNPKHFDAHRLKVRTN-------------------------------NDSNDNMESQQRYSVPEHLSEFMVECTAQQKPLVLLALLLEQYQTNIRTHQPNGIIVVFTASLDSTHRLTRLLQILWESGGYGSA----------------SSVAEFSSALTQKQRGRLLRRCTGSVEDVTASKNRNNKKKKIQQEDHDQQHPISVVVCSDGMSRGMDIPSVSAVINYDVPGFAKTYVHRCGRTARAGRKGKAISVLKDGQVTKFFKMRELIDRPD-RVNKMGVRKDLVQNIVPIYQSCMRSLRRVMQAENDGELDTIAPLT 546          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10962.633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSH0_ECTSI1.860e-27169.58DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835YS10_9STRA7.060e-14446.07DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S3V688_9STRA1.710e-10739.30Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
M4B1B7_HYAAE1.810e-9536.80Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
D0MZI2_PHYIT3.190e-9439.80DEAD/DEAH box RNA helicase, putative n=13 Tax=Phyt... [more]
K0SZ73_THAOC1.880e-9337.58Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A6A3MZZ4_9STRA1.300e-9239.49ATP-dependent RNA helicase n=9 Tax=Phytophthora Ta... [more]
H3GNQ4_PHYRM1.340e-9239.29Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A5D6XXH1_9STRA2.400e-9240.56Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7S4QRG8_9STRA6.000e-9237.00Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10962contigS-dermatodea_contig10962:797..5627 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score666.0
Seed ortholog evalue1.5e-188
Seed eggNOG ortholog2880.D7FSH0
Preferred nameDBP6
KEGG koko:K14807
GOsGO:0000460,GO:0000463,GO:0000466,GO:0000470,GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010467,GO:0010501,GO:0016070,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017151,GO:0019899,GO:0022613,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042273,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070035,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360,GO:1990904
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0350@2759
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-04_000860.1
Exons8
Model size1894
Cds size1596
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10962.633.1prot_S-dermatodea_contig10962.633.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig10962 1422..5521 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924181.5389314-UTR-S-dermatodea_contig10962:796..9221622924181.5389314-UTR-S-dermatodea_contig10962:796..922Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10962 797..922 +
1694079074.0373757-UTR-S-dermatodea_contig10962:796..9221694079074.0373757-UTR-S-dermatodea_contig10962:796..922Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10962 797..922 +
1622924181.552219-UTR-S-dermatodea_contig10962:1355..14211622924181.552219-UTR-S-dermatodea_contig10962:1355..1421Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10962 1356..1421 +
1694079074.0486813-UTR-S-dermatodea_contig10962:1355..14211694079074.0486813-UTR-S-dermatodea_contig10962:1355..1421Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10962 1356..1421 +
1622924181.6342947-UTR-S-dermatodea_contig10962:5521..56271622924181.6342947-UTR-S-dermatodea_contig10962:5521..5627Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10962 5522..5627 +
1694079074.1446521-UTR-S-dermatodea_contig10962:5521..56271694079074.1446521-UTR-S-dermatodea_contig10962:5521..5627Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10962 5522..5627 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924181.563178-CDS-S-dermatodea_contig10962:1421..15451622924181.563178-CDS-S-dermatodea_contig10962:1421..1545Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10962 1422..1545 +
1694079074.063016-CDS-S-dermatodea_contig10962:1421..15451694079074.063016-CDS-S-dermatodea_contig10962:1421..1545Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10962 1422..1545 +
1622924181.572117-CDS-S-dermatodea_contig10962:2206..23401622924181.572117-CDS-S-dermatodea_contig10962:2206..2340Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10962 2207..2340 +
1694079074.0719755-CDS-S-dermatodea_contig10962:2206..23401694079074.0719755-CDS-S-dermatodea_contig10962:2206..2340Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10962 2207..2340 +
1622924181.5810258-CDS-S-dermatodea_contig10962:2741..29051622924181.5810258-CDS-S-dermatodea_contig10962:2741..2905Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10962 2742..2905 +
1694079074.0802412-CDS-S-dermatodea_contig10962:2741..29051694079074.0802412-CDS-S-dermatodea_contig10962:2741..2905Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10962 2742..2905 +
1622924181.5901666-CDS-S-dermatodea_contig10962:3218..37411622924181.5901666-CDS-S-dermatodea_contig10962:3218..3741Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10962 3219..3741 +
1694079074.096761-CDS-S-dermatodea_contig10962:3218..37411694079074.096761-CDS-S-dermatodea_contig10962:3218..3741Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10962 3219..3741 +
1622924181.5998836-CDS-S-dermatodea_contig10962:4176..43031622924181.5998836-CDS-S-dermatodea_contig10962:4176..4303Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10962 4177..4303 +
1694079074.1100872-CDS-S-dermatodea_contig10962:4176..43031694079074.1100872-CDS-S-dermatodea_contig10962:4176..4303Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10962 4177..4303 +
1622924181.6109858-CDS-S-dermatodea_contig10962:4631..48901622924181.6109858-CDS-S-dermatodea_contig10962:4631..4890Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10962 4632..4890 +
1694079074.1264763-CDS-S-dermatodea_contig10962:4631..48901694079074.1264763-CDS-S-dermatodea_contig10962:4631..4890Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10962 4632..4890 +
1622924181.6210108-CDS-S-dermatodea_contig10962:5256..55211622924181.6210108-CDS-S-dermatodea_contig10962:5256..5521Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10962 5257..5521 +
1694079074.134305-CDS-S-dermatodea_contig10962:5256..55211694079074.134305-CDS-S-dermatodea_contig10962:5256..5521Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10962 5257..5521 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig10962.633.1

>prot_S-dermatodea_contig10962.633.1 ID=prot_S-dermatodea_contig10962.633.1|Name=mRNA_S-dermatodea_contig10962.633.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=532bp
MQVHSVFERYARGTGLRVGLAIGQTNFLEEQLALVGEVALAGDPVATAKA
SFLRGQGRHTGPDLTKSLPLDGRGEFTSVQAGGASEVDILVATPGRLLDH
LAQTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVIKAAYRREPGTAAPI
SGEAKVGVVNSENDGRRAKPNDGTAAGIPRAEERPHAPSAVRLDPVTMRG
RPLATGDRVRGPTVSTPPLRKLLFSATLTSNPQKLAGLDVVNPLIYTAKE
TVRTTGRRGRTSGAVDGGGEEHESRRPSQETRRSNLDEIGGDGKGKGQYS
TPATLEETYTVCDSQAKPLVLLSLLRETLGRRKGLSVVFTSSVDSTHRLF
RLLQLFGGFEGSDAAGGENGNADGGPGPDADSGVAEFSSSLGQRQRSHII
RRARAGDVRVIVCSDGMARGMDLEGVGLVVNYDVPSQAKTYVHRVGRTAR
AGLRGVAVTIAKKGQVKQFLQMRAGVDRKRVRLDASPADQSRILLLAGRY
QRCLKDLKEVLEAERAGDLDPTASVTAVDAA*
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mRNA from alignment at S-dermatodea_contig10962:797..5627+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig10962.633.1 ID=mRNA_S-dermatodea_contig10962.633.1|Name=mRNA_S-dermatodea_contig10962.633.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4831bp|location=Sequence derived from alignment at S-dermatodea_contig10962:797..5627+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGATAAGGGTGGTTCCAGACATCGTAGCCACGGAGCGGCACTCGCACGT GCAAAGCCGGGATATCTGCGTGTCGGCTCCCACTGGTAGCGGCAAGACCT TGGTCTTTGTCCTGGGAGTCTTGCAGGTAAAGGCGAATCACGATACCTTA TACTTGTACAAGTATTCTCTAGGAGACGTGACAGCAGTTGCATGTTGAGT TGCTGCTCGTGTGCCACGGCATCGAGGAAGCAATGCACAGCATGTGCTGT GACCGTCCGGAGGCTGCTCACGAAGCGCATGCCCTCGAGGTTTGATGTGT GCGCCATGCCTCTGTGCTGGTACCTGGATCAGACGAGGCGACTACGACTG GGTAGGGTACATATGTGCGTCATCCCCAAGCAGAAAAAATTCCCGCTCTT CGATGATTGTTGCGCCTGCGTGTGCAAGTGCTGCCTCAAGCGATGGCGTT GTGTCCATTTGCTCGCGGCGGATATACAAATGAGGTCGCTGCCCCCAAGC GCTCCCCAACCCTCGGCGGTGCTTTTCACACTGGTATTTTTCGCACCCTG TGCTGGCAGGCGTTGATACGAAGGCGCGCGGTGAGGTTGCGGGCATTAGT CCTGTTGCCGTCGAGGGACTTGGCGATGCAAGTCCACTCGGTCTTCGAGA GATACGCGCGAGGCACCGGCCTGCGCGTGGGGCTGGCCATTGGCCAGACG AACTTCCTCGAGGAGCAGCTGGCGCTTGTTGGGGAGGTGGCCTTGGCAGG TGAGACTCTTTCAATTTCCGGTGTCCGATAATGTCATTGGAGGAGCGGTG TGGTTTAGACATATTGACCGATACAGCCATTCTTGTACATCTGTGTTAGC ACATCGTGTTTTGGGGAGCAGACAGTGATTGGGCTGACATGTGTCAAATC GCGGCATTTGAACAAGAGGAGATAAGGTTTCAGACACGGAGGCAGCGGTA GACGCACGGAGGGTAAGCCCCACGGCACGGTCGTAGTGTGCGTCGTTTTT CGAAGCTGCGAAGATGTCAAGAAAGGCCGGACCGAGTTAATGGCAACCAA CGGCAAAACGTTAGACCGCACTTAAGTCACCTGGCTTTCGAGACTAGAAG CCGACCTGCATTTTTGCTTGATTTGTTCGGAGGCATGCTCCCGGTTCATG CGTTTCGACATATTTGTACCGTTGCTCCTCCAAACATGACGCGCGTGTGG CAGTAGAGTAATGTCCGACCTGCTGTTGCGTCCATCAGCTTTCGAGTCTT AGTGCATTAGCGCCGATCGAACTAGGACGGAGCAGCCACACAGGCAAGTC GTTGGCGCGGGCGGATATGTCACGTGTTCGTCTCGCTGTCGGCCTTTTGT TTTTAACGTGAACGCGTGTTGGCCTCGCCCTTTTCTTCCCTCCCAATAAT GATGAGGCAGGAGATCCGGTAGCGACGGCCAAAGCGAGTTTTTTGCGGGG GCAAGGCCGCCACACGGGGCCAGACCTGACGAAGTCGCTGCCTCTAGACG GGAGGGGTGAATTCACGAGCGTGCAGGCTGGGGGGGCGTCGGAGGTATGA CTCGTGCGCTGGACCTGGTGTGTGGCCTGAGCTGAGGCTTGTCTATACGC AAAACCCCATTTGTGCGGCGGCTCTATTAGGGCCCAAAGTGGAACAGCAC GCTTTCCGCGAGTTGCGTTAGTGCTCGATTCCTGGTGGGTGATGCATGCG TATATTACCATGCCTGGTAGGCGGAAATGGCCCACAGTGTCCTGCCGGGG TGGGGTACCGTACTATTAATAGGGGGGCCTGCGCACAGTGGATGGCGCAG ACCCGACATGGCACCGGCGTCTTCCATCTGATGACGCGAACGATGGTTTG GCGACCCGTATATGCGGCGTTCAATCGTTGTATTCTCCGTTGTGTTGCCT CGATTGACGACCGACCCGACCTACGCCCGAACTGCGTACCATCAGGTGGA CATCTTGGTGGCAACCCCTGGCAGATTATTGGATCACCTCGCGCAAACCC CCGGCTTCACACTGCAACACTTGCGGTACCTTGTGATCGACGAGGCGGAT CGGTTGCTCAACCAGAGCTATCAGGGCTGGGTGGGCAAAGTCATCAAGGC GGCATACAGGTGCGAAAGCGCTGCGTCTGTTGTAAGGGCGCGAGCAGTGT CTGGAAATACACACATACATTTTTTAGACCGACGGCCGCTCCCGCGGTAG CATAGGGAGGGTGCAATACTGGCTGCAACTAGTACTACTGTGCCTCCTGC AACGTGCGATGGCGTACGACCCAGTGTAGATGGCAAATGATTGGAGGATA ACCTCACCCACCGCAGCATTTATGCGCGAGATGGCGACCCTGACGAGAAC ATGTGATGTCGACCGCTTTTTGTCACACTTTTTTCGCACTTTTTTCGGGT GCGCGACGTGCTCCGTTGACAGGAGAGAACCGGGAACTGCCGCGCCAATC TCCGGAGAAGCTAAAGTTGGTGTCGTGAACAGCGAAAACGACGGGAGGCG AGCGAAACCGAACGATGGAACGGCTGCCGGCATCCCGAGAGCCGAAGAGC GACCCCACGCTCCTTCGGCGGTGCGGTTAGATCCGGTAACGATGCGAGGG AGGCCCCTGGCGACGGGCGATCGCGTCCGCGGACCGACCGTCTCCACGCC GCCGTTGCGAAAACTTTTGTTCTCAGCCACTCTCACGAGCAACCCGCAGA AGTTGGCCGGGCTGGACGTTGTAAATCCCCTCATTTATACCGCGAAGGAA ACGGTGCGGACGACGGGGCGGCGTGGGCGTACGTCCGGGGCTGTCGACGG CGGTGGTGAGGAGCACGAATCGAGGCGGCCTTCTCAGGAGACACGGCGGT CGAACTTGGACGAGATCGGCGGGGATGGTAAGGGTAAGGGGCAGTATAGC ACCCCGGCCACGCTGGAGGAGACATACACCGTTTGTGATTCTCAGGTGAG AGGCGGACGAGATTAAACAATAGCGTCGGAATGTCCGGCCCTAGACGTGC TTCTTTCTGCCCGGAACGCCCGCAGTGGGGCGAAGCAGGCGCTGCCGTGG ATGAGGCCACCGTGCTTAGCGCTCCGGGACGACCCGGGAGATTTTTTCCC CGTTTCCTCGTGTGGTTTGCCTGTAGCGCCGTGACCTTGCTGTTTCGGAT GTCAATCCTTGGCGACTATCGAATGCAGGCTTTTTGGCGTCATTGGATGC ACTTGGTCCCCCCGTGCGAGGATCCCCGCTCACCTGCTTGGCCGTGCTGC CTGTAGTCGTAGCCTTCCGTTGTGACCTATAATAGCTGTCACCCGTCGAC CCCAATTTACGCCACGCCCTTGTTTCTGGACCGTCCTCGACTTTACCGTC TCCATCCGACTGCACTTGTTTTTGACGCAGGCGAAGCCTCTGGTGCTGCT ATCCCTGCTGCGGGAGACGCTGGGGCGCCGGAAGGGGCTGTCGGTAGTGT TCACGTCGTCGGTCGATTCGACTCACCGACTCTTCCGCCTGCTACAGCTC TTCGGAGGTGTGCTACGATAGCGTGTTGTCTGGCTGTGCTATTATAGAAA GCCACGGCGTATTTCGATCGCCCGGCGTGCGGTTTATACAATCTCACGTC CCCTGTGTTGCGTAACGACGAGGAAAATCCTGTGGGGAAGAAAACGCCTA TCGTGACTTTTCCAACCTTGCGAACCGATCGCTTTTCTCAGATCCACTGC GCAGCAGCCAAACGTGCGCGGTTCGAACGCTACACAGGCAAGGCCGATAT TGTGCGCTGTTGCTGCAGCTGTTGGCCTTAGTATGATTGCATTTTCCTCG GCCTGACGCATCCATCTCCTTGTTGCTTTTTACAGGTTTTGAGGGAAGCG ACGCTGCCGGAGGGGAGAACGGAAATGCCGACGGCGGCCCTGGTCCCGAC GCGGACAGCGGGGTTGCGGAGTTTTCAAGCAGCCTTGGGCAGCGGCAACG CTCCCACATCATCCGACGGGCCAGAGCGGGAGACGTCCGCGTGATCGTTT GTTCCGATGGAATGGCGCGCGGGATGGACCTCGAGGGTGTGGGATTGGTG GTGAACTACGATGTGCCCTCTCAAGCCAAGACTTACGTGCACAGGTGCGG CTGACGCGGTAGAAAAGTTGCTTCTCGTCTTTTGTCTCGCGTGGAGTTTT CGTTGCTTGGTTGGAGCACGAGACAGCGAGGCACCGTTGGGTGAATATTT TGGGAGCTCTCGCGCTTCCCGAAGGCAGCGTCGTTGGAACCATTCGATCT CGGGGCATTTCTCCGTTGATCTGCTGCTTCCTGGTGGAATGCATCAGGGT ACTACTAGCTGTAGATCGGCGCCAGCTGACGCCTCCTCTCTCCACCTGGA GCTTGAGCGCCTTTAGGGGTGACTTGCGCCTTTAGGACGTACACAGCCGT CCCACAATGCCCCCGTCCCACAACGCCTCCGTCCCGTGAAACCCGTCATT GCATCCACAGGGTGGGCCGAACGGCACGTGCCGGGTTGAGAGGCGTCGCC GTGACGATCGCCAAGAAGGGGCAGGTGAAGCAGTTCCTCCAGATGCGCGC AGGCGTGGACAGGAAGCGGGTGCGATTGGACGCATCCCCGGCCGACCAAT CGCGTATCTTGCTCCTCGCCGGTCGGTACCAGCGGTGCCTCAAGGACCTC AAGGAGGTCTTGGAGGCCGAGAGGGCGGGCGATTTGGATCCGACCGCTTC TGTGACGGCGGTAGACGCCGCGTAGCGCTGGAAGGGCTAGATGGTGCGGA TTTCCGCGCGTTGAAAGTCCCACGCGCTGCTTGACGGTATTTTTGTGCGC GGCGTTTTCAAGTTTTTTTTTTCTCTCGCAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig10962:797..5627+

>mRNA_S-dermatodea_contig10962.633.1 ID=mRNA_S-dermatodea_contig10962.633.1|Name=mRNA_S-dermatodea_contig10962.633.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3192bp|location=Sequence derived from alignment at S-dermatodea_contig10962:797..5627+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCAAGTCCACTCGGTCTTCGAGAGATACGCGCGAGGCACCGGCCTGCG
CGTGGGGCTGGCCATTGGCCAGACGAACTTCCTCGAGGAGCAGCTGGCGC
TTGTTGGGGAGGTGGCCTTGGCAGATGCAAGTCCACTCGGTCTTCGAGAG
ATACGCGCGAGGCACCGGCCTGCGCGTGGGGCTGGCCATTGGCCAGACGA
ACTTCCTCGAGGAGCAGCTGGCGCTTGTTGGGGAGGTGGCCTTGGCAGGA
GATCCGGTAGCGACGGCCAAAGCGAGTTTTTTGCGGGGGCAAGGCCGCCA
CACGGGGCCAGACCTGACGAAGTCGCTGCCTCTAGACGGGAGGGGTGAAT
TCACGAGCGTGCAGGCTGGGGGGGCGTCGGAGGAGATCCGGTAGCGACGG
CCAAAGCGAGTTTTTTGCGGGGGCAAGGCCGCCACACGGGGCCAGACCTG
ACGAAGTCGCTGCCTCTAGACGGGAGGGGTGAATTCACGAGCGTGCAGGC
TGGGGGGGCGTCGGAGGTGGACATCTTGGTGGCAACCCCTGGCAGATTAT
TGGATCACCTCGCGCAAACCCCCGGCTTCACACTGCAACACTTGCGGTAC
CTTGTGATCGACGAGGCGGATCGGTTGCTCAACCAGAGCTATCAGGGCTG
GGTGGGCAAAGTCATCAAGGCGGCATACAGGTGGACATCTTGGTGGCAAC
CCCTGGCAGATTATTGGATCACCTCGCGCAAACCCCCGGCTTCACACTGC
AACACTTGCGGTACCTTGTGATCGACGAGGCGGATCGGTTGCTCAACCAG
AGCTATCAGGGCTGGGTGGGCAAAGTCATCAAGGCGGCATACAGGAGAGA
ACCGGGAACTGCCGCGCCAATCTCCGGAGAAGCTAAAGTTGGTGTCGTGA
ACAGCGAAAACGACGGGAGGCGAGCGAAACCGAACGATGGAACGGCTGCC
GGCATCCCGAGAGCCGAAGAGCGACCCCACGCTCCTTCGGCGGTGCGGTT
AGATCCGGTAACGATGCGAGGGAGGCCCCTGGCGACGGGCGATCGCGTCC
GCGGACCGACCGTCTCCACGCCGCCGTTGCGAAAACTTTTGTTCTCAGCC
ACTCTCACGAGCAACCCGCAGAAGTTGGCCGGGCTGGACGTTGTAAATCC
CCTCATTTATACCGCGAAGGAAACGGTGCGGACGACGGGGCGGCGTGGGC
GTACGTCCGGGGCTGTCGACGGCGGTGGTGAGGAGCACGAATCGAGGCGG
CCTTCTCAGGAGACACGGCGGTCGAACTTGGACGAGATCGGCGGGGATGG
TAAGGGTAAGGGGCAGTATAGCACCCCGGCCACGCTGGAGGAGACATACA
CCGTTTGTGATTCTCAGGAGAGAACCGGGAACTGCCGCGCCAATCTCCGG
AGAAGCTAAAGTTGGTGTCGTGAACAGCGAAAACGACGGGAGGCGAGCGA
AACCGAACGATGGAACGGCTGCCGGCATCCCGAGAGCCGAAGAGCGACCC
CACGCTCCTTCGGCGGTGCGGTTAGATCCGGTAACGATGCGAGGGAGGCC
CCTGGCGACGGGCGATCGCGTCCGCGGACCGACCGTCTCCACGCCGCCGT
TGCGAAAACTTTTGTTCTCAGCCACTCTCACGAGCAACCCGCAGAAGTTG
GCCGGGCTGGACGTTGTAAATCCCCTCATTTATACCGCGAAGGAAACGGT
GCGGACGACGGGGCGGCGTGGGCGTACGTCCGGGGCTGTCGACGGCGGTG
GTGAGGAGCACGAATCGAGGCGGCCTTCTCAGGAGACACGGCGGTCGAAC
TTGGACGAGATCGGCGGGGATGGTAAGGGTAAGGGGCAGTATAGCACCCC
GGCCACGCTGGAGGAGACATACACCGTTTGTGATTCTCAGGCGAAGCCTC
TGGTGCTGCTATCCCTGCTGCGGGAGACGCTGGGGCGCCGGAAGGGGCTG
TCGGTAGTGTTCACGTCGTCGGTCGATTCGACTCACCGACTCTTCCGCCT
GCTACAGCTCTTCGGAGGCGAAGCCTCTGGTGCTGCTATCCCTGCTGCGG
GAGACGCTGGGGCGCCGGAAGGGGCTGTCGGTAGTGTTCACGTCGTCGGT
CGATTCGACTCACCGACTCTTCCGCCTGCTACAGCTCTTCGGAGGTTTTG
AGGGAAGCGACGCTGCCGGAGGGGAGAACGGAAATGCCGACGGCGGCCCT
GGTCCCGACGCGGACAGCGGGGTTGCGGAGTTTTCAAGCAGCCTTGGGCA
GCGGCAACGCTCCCACATCATCCGACGGGCCAGAGCGGGAGACGTCCGCG
TGATCGTTTGTTCCGATGGAATGGCGCGCGGGATGGACCTCGAGGGTGTG
GGATTGGTGGTGAACTACGATGTGCCCTCTCAAGCCAAGACTTACGTGCA
CAGGTTTTGAGGGAAGCGACGCTGCCGGAGGGGAGAACGGAAATGCCGAC
GGCGGCCCTGGTCCCGACGCGGACAGCGGGGTTGCGGAGTTTTCAAGCAG
CCTTGGGCAGCGGCAACGCTCCCACATCATCCGACGGGCCAGAGCGGGAG
ACGTCCGCGTGATCGTTTGTTCCGATGGAATGGCGCGCGGGATGGACCTC
GAGGGTGTGGGATTGGTGGTGAACTACGATGTGCCCTCTCAAGCCAAGAC
TTACGTGCACAGGGTGGGCCGAACGGCACGTGCCGGGTTGAGAGGCGTCG
CCGTGACGATCGCCAAGAAGGGGCAGGTGAAGCAGTTCCTCCAGATGCGC
GCAGGCGTGGACAGGAAGCGGGTGCGATTGGACGCATCCCCGGCCGACCA
ATCGCGTATCTTGCTCCTCGCCGGTCGGTACCAGCGGTGCCTCAAGGACC
TCAAGGAGGTCTTGGAGGCCGAGAGGGCGGGCGATTTGGATCCGACCGCT
TCTGTGACGGCGGTAGACGCCGCGTAGGGTGGGCCGAACGGCACGTGCCG
GGTTGAGAGGCGTCGCCGTGACGATCGCCAAGAAGGGGCAGGTGAAGCAG
TTCCTCCAGATGCGCGCAGGCGTGGACAGGAAGCGGGTGCGATTGGACGC
ATCCCCGGCCGACCAATCGCGTATCTTGCTCCTCGCCGGTCGGTACCAGC
GGTGCCTCAAGGACCTCAAGGAGGTCTTGGAGGCCGAGAGGGCGGGCGAT
TTGGATCCGACCGCTTCTGTGACGGCGGTAGACGCCGCGTAG
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