mRNA_S-dermatodea_contig10962.633.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10962.633.1 vs. uniprot
Match: D7FSH0_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSH0_ECTSI) HSP 1 Score: 774 bits (1998), Expect = 1.860e-271 Identity = 446/641 (69.58%), Postives = 489/641 (76.29%), Query Frame = 1
Query: 1 QIRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRAVRLRALVLLPSRDLAMQVHSVFERYARGTGLRVGLAIGQTNFLEEQLALVGEVALAGDPVATAKASFLRGQGRHTGPDLTKS-LPLDGRG-EFTSVQAGGASEVDILVATPGRLLDHXXXXXXXXXXXLRYLVIDEADRLLNQSYQGWVGKVIKAAYRREPGTAAPI------SGEAK----VGVVNSENDGRRAKP------------NDGTAA-------GIPRAEERPHAPS-----AVRLDPVTMRGRPLATGDRVRGPTVSTPPLRKLLFSATLTSNPQKLAGLDVVNPLIYTAKETVRTTGRRGRTSGAVDGGGEEHESRRPSQETRRSNLDEIGGDGKGKGQYSTPATLEETYTVCDSQAKPLVLLSLLRETLGRRKGLSVVFTSSVDSTHRLFRLLQLFGGFE---GSDAAGGENGNXXXXXXXXXXS--------GVAEFSSSLGQRQRSHIIRRARAGDVRVIVCSDGMARGMDLEGVGLVVNYDVPSQAKTYVHRVGRTARAGLRGVAVTIAKKGQVKQFLQMRAGVDRKRVRLDASPADQSRILLLAGRYQRCLKDLKEVLEAERAGDLDPTASVTAVDA 1782
Q+RVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRR VRLRALVLLPSRDLAMQVHSVF++YARGTGLRVGLAIGQTNFLEEQLALVG VALAG+P ATA+ASFLR QGR P+ T LD G T AGG+SEVDI+VATPGRLLDH LRYL+IDEADRLLNQSYQGWVGKVIKAAYR+EPGTAAP+ +G K G +E+D R + N+G+ + G+ +RP PS A LDPVT+RGRPLATG+R+RG TVSTPPLRKLLFSATLT+NPQKLAGLDVVNPLIYTA E G + R + DG RPSQETRRSNLD IG +G G++STPATLEETYTVCDSQAKPLVLLSLLRE +GR+ LSVVFTSSVDSTHRLFRLLQLFGGFE G+DA GG GVAEFSSSLGQRQRS IIRRARAG VRVIVCSDGMARGMDL+GVGLVVNYDVPSQAKTYVHRVGRTARAG RG AVTI KKGQVKQFL MR+G+D+KRVRLD+SPADQSR+L LAGRYQ CLKDLKEV+EAER G+LDP+A VTA ++
Sbjct: 203 QVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRVVRLRALVLLPSRDLAMQVHSVFKKYARGTGLRVGLAIGQTNFLEEQLALVGPVALAGNPTATARASFLRAQGRAIRPNPTMGGSNLDSGGWSGTGAPAGGSSEVDIVVATPGRLLDHLTQTPGFTLQHLRYLIIDEADRLLNQSYQGWVGKVIKAAYRKEPGTAAPVYERFTFNGGGKRNDVSGGAGAEDDDSRGQQQPQDVEKAQECDNNGSNSVSSQQQLGVTGVGKRPRPPSRRPPSAFSLDPVTVRGRPLATGERIRGATVSTPPLRKLLFSATLTNNPQKLAGLDVVNPLIYTATEFSTAAGGQRRETSGADG------DPRPSQETRRSNLDGIGTAVEGGGRFSTPATLEETYTVCDSQAKPLVLLSLLREMVGRQADLSVVFTSSVDSTHRLFRLLQLFGGFERTAGTDAEGGGGDGDTHLPDDAIHGDGNDDGDGGVAEFSSSLGQRQRSSIIRRARAGAVRVIVCSDGMARGMDLDGVGLVVNYDVPSQAKTYVHRVGRTARAGSRGTAVTITKKGQVKQFLNMRSGIDKKRVRLDSSPADQSRLLPLAGRYQLCLKDLKEVMEAERTGELDPSAPVTATES 837
BLAST of mRNA_S-dermatodea_contig10962.633.1 vs. uniprot
Match: A0A835YS10_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS10_9STRA) HSP 1 Score: 444 bits (1142), Expect = 7.060e-144 Identity = 299/649 (46.07%), Postives = 356/649 (54.85%), Query Frame = 1
Query: 4 IRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRAVRLRALVLLPSRDLAMQVHSVFERYARGTGLRVGLAIGQTNFLEEQLALVGEVALAGDPVATAKASFLRGQGRHTGPDLTKSLPLDGRGEFTSVQAGGASEVDILVATPGRLLDHXXXXXXXXXXXLRYLVIDEADRLLNQSYQGWVGKVIKAAYRREPGT------AAPISGEAKVGVVNSENDGRRAKPNDGTAAGIPRAEERPHAPSAVR----------LDPVTMRGRPLATGDRVRGPTVSTPPLRKLLFSATLTSNPQKLAGLDVVNPLIYTAKETVRTTGRRGRTSGAVDGGGEEHESRRPSQETRRSNLD-EIGGDGKGKGQYSTPATLEETYTVCDSQAKPLVLLSLLRETLGRRKG-LSVVFTSSVDSTHRLFRLLQLFGGFEGSDAAGGENGNXXXXXXXXXXSGVAEFSSSLGQRQRSHIIRRARAGD------------------------------------VRVIVCSDGMARGMDLEGVGLVVNYDVPSQAKTYVHRVGRTARAGLRGVAVTIAKKGQVKQFLQMRAGVDRKRV--RLDASPADQSRILLLAGRYQRCLKDLKEVLEAERAGDLDPTASVTAVDA 1782
+ VVPDI+AT RHSHVQ+RD+CV APTGSGKTLV+VLGV+QAL+ RR RLRAL LLPSRDLA QVH VF Y GTGLRVGLAIGQ+N L+EQL+LVG AL+ PVA A+A G +G RG +V GG SEVDILVATPGRLLDH L YLV+DEADRLLNQSYQ WVG+V++AAYR G+ ++PIS + + P T+RGRP A RV GP +T PLRKLLFSATLT+NPQKLA L + NP+ YTA+E GR P Q T R L+ GGDG+ YSTPA+L E +C + KPL+LL+LL G G L+VVF SSVDSTHRL RLLQLFG AEFSS+L Q+QR+ + V+VCSDGMARGMD+ GVG VVNYD P+ A+TYVHRVGRTARAG G+AVT+ K+GQV QF MRA V+ V +A P D LA RY+RCL++L VLEAE+ G+L A V A+D+
Sbjct: 74 VSVVPDIMATARHSHVQARDVCVGAPTGSGKTLVYVLGVVQALLPRRVRRLRALALLPSRDLATQVHGVFTTYCTGTGLRVGLAIGQSNLLDEQLSLVGTTALSNSPVAAARAWV----GGKSGGLRAPPAGAFARGMSAAVPLGGVSEVDILVATPGRLLDHLEQTPGFTLQHLMYLVVDEADRLLNQSYQDWVGRVLEAAYRAREGSVTCGSSSSPISNPSVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQPTTVRGRPGAAEGRVTGPIAATLPLRKLLFSATLTNNPQKLASLGLANPVFYTARE-----GRGXXXXXXXXXXXXXGSVAAPEQRTDRFTLEARDGGDGEAADAYSTPASLTERTLLCAAAEKPLLLLALLLR--GPVHGVLTVVFASSVDSTHRLARLLQLFG------------------------VAAAEFSSALSQKQRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSVVVCSDGMARGMDIAGVGCVVNYDAPTHARTYVHRVGRTARAGRAGLAVTLLKRGQVGQFAAMRAKVNAVEVPGMAEAPPTDG-----LAARYRRCLRELAAVLEAEKRGELGAAAPVGALDS 682
BLAST of mRNA_S-dermatodea_contig10962.633.1 vs. uniprot
Match: A0A7S3V688_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V688_9STRA) HSP 1 Score: 350 bits (898), Expect = 1.710e-107 Identity = 246/626 (39.30%), Postives = 333/626 (53.19%), Query Frame = 1
Query: 1 QIRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRAVRLRALVLLPSRDLAMQVHSVFERYARGTGLRVGLAIGQTNFLEEQLALVGEVALAG-DPVATAKASFLRGQGRHTGPDLTKSLPLDGRGEFTSVQAGGA--------------------SEVDILVATPGRLLDHXXXXXXXXXXXLRYLVIDEADRLLNQSYQGWVGKVIKAAYRREPGTAAPISGEAKVGVVNSENDGRRAKPNDGTAAGIPRAEERPHAPSAVRLDPVTMRGRPLATGDRVRGPTVSTP-----PLRKLLFSATLTSNPQKLAGLDVVNPLIYTAKETVRTTGRRGRTSGAVDGGGEEHESRRPSQETRRSNLDEIGGDGKGKGQYSTPATLEETYTVCDSQAKPLVLLSLLRET------LGRRKGLSVVFTSSVDSTHRLFRLLQLFGGFEGSDAAGGENGNXXXXXXXXXXSGVAEFSSSLGQRQRSHIIRRAR-----AGDVRVIVCSDGMARGMDLEGVGLVVNYDVPSQAKTYVHRVGRTARAGLRGVAVTIAKKGQVKQFLQMRAGVDRKRVRLDASPADQSRILLLAGRYQRCLKDLKEVLEAERAGDLDPTASV 1767
Q V+PD++A+ERH+H+++RDICV+APTGSGKTL FVL VL +L RR RLRALV+LPSRDLA QV VF+RY++G+ L +GLAIGQT+F EQ +L+ E + G P + + + + TK+ D G+ + V GG S VD+LV TPGRL+DH LR+L+ DEADRL+NQ YQ W+ +V++AA +A P +N ++ G + +LDPVT R R + D T T LRKLLFSATLT +P+KLA L +VNP + A + S + D H + YS P L E C+++ KPLVL++ L E G+ G+ VVFTSSVDSTHRL RLLQLF A G+ G S V EFSS+L Q+QRS +++R VRV+VCSDGM+RGMD+ + V+NYDVPS AKTYVHR GRTARAG G A+TI K GQV +FL+MR +D+ + ++ + + + + Y+ C+K LK V++AE +L P A++
Sbjct: 203 QALVIPDVIASERHAHIRNRDICVAAPTGSGKTLSFVLPVLNSLANRRIKRLRALVVLPSRDLAAQVFKVFQRYSKGSDLSIGLAIGQTDFEAEQSSLIFEKKMIGFQPREEYRCQYALKP--FSVKNATKAYSFDAPGDKSDVSLGGCWAHGDLKDFPDLCDTPIGGKSAVDVLVCTPGRLIDHLDKTPGFTLQHLRFLIADEADRLVNQGYQDWIRRVVEAA------SAGPDRS------LNMDSCGLQ------------------------KLDPVTWR-RGIDANDSNHANTQDTNVCRSVQLRKLLFSATLTKDPRKLASLGLVNPKYFDAHSL------NNKVSASQDANTPNHST------------------------YSLPGGLSEFMVECNAEQKPLVLMAFLLEQGLLDKGEGQTNGIVVVFTSSVDSTHRLARLLQLFW-------ASGKYG---------PTSCVGEFSSALPQKQRSQLMKRCNNTTDDPSRVRVVVCSDGMSRGMDISSITAVINYDVPSFAKTYVHRCGRTARAGRSGRAITIMKSGQVARFLKMRQLIDKPQ-NVEKAGIKKELVNSIVPIYKICVKALKRVMDAEEDNELSPVATL 742
BLAST of mRNA_S-dermatodea_contig10962.633.1 vs. uniprot
Match: M4B1B7_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B1B7_HYAAE) HSP 1 Score: 313 bits (803), Expect = 1.810e-95 Identity = 216/587 (36.80%), Postives = 297/587 (50.60%), Query Frame = 1
Query: 1 QIRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRAVRLRALVLLPSRDLAMQVHSVFERYARGTGLRVGLAIGQTNFLEEQLALVGEVALAGDPVATAKASFLRGQGRHTGPDLTKSLPLDGRGEFTSVQAGGASEVDILVATPGRLLDHXXXXXXXXXXXLRYLVIDEADRLLNQSYQGWVGKVIKAAYRREPGTAAPISGEAKVGVVNSENDGRRAKPNDGTAAGIPRAEERPHAPSAVRLDPVTMRGRPLATGDRVRGPTVSTPPLRKLLFSATLTSNPQKLAGLDVVNPLIYTAKETVRTTGRRGRTSGAVDGGGEEHESRRPSQETRRSNLDEIGGDGKGKGQYSTPATLEETYTVCDSQAKPLVLLSLLRETLGRRKGLSVVFTSSVDSTHRLFRLLQLFGGFEGSDAAGGENGNXXXXXXXXXXSGVAEFSSSLGQRQRSHIIRRARAGDVRVIVCSDGMARGMDLEGVGLVVNYDVPSQAKTYVHRVGRTARAGLRGVAVTIAKKGQVKQFLQMRAGVDRKRVRLDASPADQSRILLLAGRYQRCLKDLKEVLEAERAGDLDPTA 1761
Q +P I+A+ ++ + DIC+SAPTGSGKTL +V+ ++Q L+ R R+RAL+++PSRDLA+QVH++ + + + T L GLA+GQ+NF+ EQ ALVG+ ++G V A GG S VDI+VATPGRL+DH L+ V+DEADRLL+QSYQ W+ KV + + + ++GEA GV R D + R R+R P L ++L SATLT NP+KLA + + N + T + S D E + E+ K +YSTP L+E + CD+ +KPL+LL LL E G LS++FT+SV STHRL RLLQL+ + EFSSSL Q+QRS ++ +AG V +VCSD MARGMD+E + V+NYDVPS KTY+HRVGRTARAG G VT+ K GQ+K ++M D + L P Q + L RY L+ LKE L+AE+AG+L T+
Sbjct: 46 QAVAIPKILAS---TNDRVTDICISAPTGSGKTLTYVVPIVQRLLSRVVCRVRALIVVPSRDLAVQVHAIVQAFCQNTPLTCGLAVGQSNFVVEQRALVGDCHVSGQDVKDA-------------------------------MHGGQSAVDIVVATPGRLVDHLEQTRGFTLQHLQLFVVDEADRLLSQSYQDWIAKVYSSVFAGQEVDDDVLAGEA-CGVTWR------------------------------RQDSIDRR--------RIRTP------LTRVLLSATLTRNPRKLAAIGMSNAELTTIGRIDDPLADNAKQSTVGDS----------DNEDEKEGSKEVASSAK---RYSTPKNLDEYWIECDTGSKPLILLELLSEFAG---SLSIIFTASVSSTHRLARLLQLYS---------------------THPERIREFSSSLSQKQRSTLVADCKAGRVDTVVCSDAMARGMDIEDIANVINYDVPSFVKTYIHRVGRTARAGRHGRCVTLVKMGQMKGMMRMLKKADTNK--LKPYPLQQDHVKSLVPRYTEALQRLKETLDAEKAGELQVTS 514
BLAST of mRNA_S-dermatodea_contig10962.633.1 vs. uniprot
Match: D0MZI2_PHYIT (DEAD/DEAH box RNA helicase, putative n=13 Tax=Phytophthora TaxID=4783 RepID=D0MZI2_PHYIT) HSP 1 Score: 310 bits (794), Expect = 3.190e-94 Identity = 234/588 (39.80%), Postives = 308/588 (52.38%), Query Frame = 1
Query: 1 QIRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRAVRLRALVLLPSRDLAMQVHSVFERYARGTGLRVGLAIGQTNFLEEQLALVGEVALAGDPVATAKASFLRGQGRHTGPDLTKSLPLDGRGEFTSVQAGGASEVDILVATPGRLLDHXXXXXXXXXXXLRYLVIDEADRLLNQSYQGWVGKVIKAAYRREPGTAAPISGEAKVGVVNSENDGRRAKPNDGTAAGIPRAEERPHAPSAVRLDPVTMRGRPLATGDRVRGPTVSTPPLRKLLFSATLTSNPQKLAGLDVVNPLIYTAKETVRTTGRRGRTSGAVDGGGEEHESRRPSQETRRSNLDEIGGDGKG-KGQYSTPATLEETYTVCDSQAKPLVLLSLLRETLGRRKGLSVVFTSSVDSTHRLFRLLQLFGGFEGSDAAGGENGNXXXXXXXXXXSGVAEFSSSLGQRQRSHIIRRARAGDVRVIVCSDGMARGMDLEGVGLVVNYDVPSQAKTYVHRVGRTARAGLRGVAVTIAKKGQVKQFLQMRAGVDRKRVRLDASPADQSRILLLAGRYQRCLKDLKEVLEAERAGDLDPTA 1761
Q +P I+A++ + DIC+SAPTGSGKTL +V+ ++Q L+ R R+RAL++LPSRDLA+QVH + +++ +GT L+ GLAIGQ+NF EQ ALVG A +G+ V + GG S VDILVATPGRL+ XXXXXXXXXXXL+ +++DEADRLLNQSYQ W+ KV + + + E D DG G+ + R D + R R+R P L ++L SATLT NP+KLA + + N + + A D E DE G + G K YSTP L+E + CD+ +KPLVLL LL E G LS+VFT+SV+STHRL RLLQL+ + EFSSSL Q+QRS ++ +AG V +VCSD MARGMD+E V VVNYDVPS KTY+HRVGRTARAG G VT+ K GQ+K ++M D +++ A Q + L RY L+ LK+ LEAE+AG L T+
Sbjct: 49 QAVAIPKILASDSD---RVTDICISAPTGSGKTLTYVVPIVQRLLPRVVCRVRALIVLPSRDLAVQVHQIVQQFVQGTPLKCGLAIGQSNFAAEQNALVG--ATSGNKVI-------------------------------ATTDGGRSLVDILVATPGRLVXXXXXXXXXXXXXLQIMIVDEADRLLNQSYQDWISKVYASVFNGQ------------------EVD------EDGLTLGV--------GVTCRRQDSINRR--------RIRTP------LTRVLLSATLTRNPRKLAAIGMSNAELTKIGRIDDPLADNAKLGNAGDSDDE----------------DEDGDEATGSKKMYSTPTNLDEYWIECDTGSKPLVLLELLSEFAG---SLSIVFTASVNSTHRLARLLQLYS---------------------THPERIREFSSSLSQKQRSSLVADCKAGRVETVVCSDAMARGMDIEDVANVVNYDVPSFIKTYIHRVGRTARAGRHGRCVTLVKLGQMKSMMRMLKKADNNKLKPYA--LQQEHMKTLVPRYTEALQQLKDTLEAEKAGKLQATS 512
BLAST of mRNA_S-dermatodea_contig10962.633.1 vs. uniprot
Match: K0SZ73_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SZ73_THAOC) HSP 1 Score: 314 bits (805), Expect = 1.880e-93 Identity = 245/652 (37.58%), Postives = 330/652 (50.61%), Query Frame = 1
Query: 1 QIRVVPDIVATERHSHVQ-SRDICVSAPTGSGKTLVFVLGVLQALI-------RRRAVRLRALVLLPSRDLAMQVHSVFERYARGTGLRVGLAIG----QTNFLEEQLALVGEVA-----------------LAGDPVATAKASFLRGQGRHTGPDLTKSLPL---DGRGEFTSV-----QAGGASEVDILVATPGRLLDHXXXXXXXXXXXLRYLVIDEADRLLNQSYQGWVGKVIKAAYRREPGTAAPISGEAKVGVVNSENDGRRAKPNDGTAAGIPRAEERPHAPSAVRLDPVTMR-----------GRPLATGDRVRGPTVSTP-PLRKLLFSATLTSNPQKLAGLDVVNPLIYTAKETVRTTGRRGRTSGAVDGGGEEHESRRPSQETRRSNLDEIGGDGKGKGQYSTPATLEETYTVCDSQAKPLVLLSLLRETLGRRK---------GLSVVFTSSVDSTHRLFRLLQLFGGFEGSDAAGGENGNXXXXXXXXXXSGVAEFSSSLGQRQRSHIIRRARAG-----DVRVIVCSDGMARGMDLEGVGLVVNYDVPSQAKTYVHRVGRTARAGLRGVAVTIAKKGQVKQFLQMRAGVDRKRVRLDASPADQSRILLLAGRYQRCLKDLKEVLEAERAGDLDPTASV 1767
Q V+PD++ +ER+SH++ +RD+C +PTGSGKTL FVL +L AL R RLRALV+LPSRDLA QVH VF RY++G+ +++GLA+G +T+ E+ +LV E +G P+ A A RH+ + S L DGRG S + G S VDILV TPGRL+DH LR++VIDEADRL+NQ YQ W+ +V++A+ NSEN + I + +DPVT R G T + G T+ P PLRKLLFSATLT +PQKLA L + NP Y A + H+S ++E + G+Y P L E+ C ++ KPLVLL+LL + + K L++VFTSSVDSTHRL RLLQL AAGG S VAE+SSS+ +QR+ I+RR R+ V V+VCSDGMARGMDL VG+V+NYDVPS AKTY+HR GRTAR G A+ + K GQV +F +MR+ +D + + + Y+ C+K L++V+ AE D+ P++SV
Sbjct: 201 QCMVIPDVIESERNSHLRGARDVCCHSPTGSGKTLAFVLPILTALHDGTSCGGARGLRRLRALVVLPSRDLARQVHGVFMRYSKGSRIKIGLAVGGGRKRTDLTNERRSLVVESQHESTGHYKEDDGTVIRRRSGGPLEEANARV-----RHSFDPTSISEALSAFDGRGSKDSCFEATPKICGISAVDILVCTPGRLVDHLDSTPGFTLQHLRFIVIDEADRLVNQPYQNWIRRVLQAS--------------------NSENCFEPLNLDMSFREYIRQPLRTAPDGQTFNIDPVTHRIAGSGAAHSLLGDSNTTESGLIGGTIGRPVPLRKLLFSATLTQDPQKLARLGLDNPKHYDANYLKK------------------HQSGSATEEAKA-------------GKYFLPVGLRESMVECTAEQKPLVLLALLLDERRQHKMVESSEQAADLTIVFTSSVDSTHRLARLLQLLW------AAGGYG----------LPSHVAEYSSSIDTKQRAAILRRCRSSLGENEKVSVLVCSDGMARGMDLPSVGVVINYDVPSFAKTYIHRCGRTARCXXTGRAINVLKGGQVNKFRKMRSLIDGGADAVHEGSVKKDLVKGALPLYKACVKALQKVITAENDEDMGPSSSV 780
BLAST of mRNA_S-dermatodea_contig10962.633.1 vs. uniprot
Match: A0A6A3MZZ4_9STRA (ATP-dependent RNA helicase n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MZZ4_9STRA) HSP 1 Score: 306 bits (783), Expect = 1.300e-92 Identity = 233/590 (39.49%), Postives = 309/590 (52.37%), Query Frame = 1
Query: 1 QIRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRAVRLRALVLLPSRDLAMQVHSVFERYARGTGLRVGLAIGQTNFLEEQLALVGEVALAGDPVATAKASFLRGQGRHTGPDLTKSLPLDGRGEFTSVQAGGASEVDILVATPGRLLDHXXXXXXXXXXXLRYLVIDEADRLLNQSYQGWVGKVIKAAYRREPGTAAPISGEAKVGVVNSENDGRRAKPNDGTAAGIPRAEERPHAPSAVRLDPVTMRGRPLATGDRVRGPTVSTPPLRKLLFSATLTSNPQKLAGLDVVNP---LIYTAKETVRTTGRRGRTSGAVDGGGEEHESRRPSQETRRSNLDEIGGDGKGKGQYSTPATLEETYTVCDSQAKPLVLLSLLRETLGRRKGLSVVFTSSVDSTHRLFRLLQLFGGFEGSDAAGGENGNXXXXXXXXXXSGVAEFSSSLGQRQRSHIIRRARAGDVRVIVCSDGMARGMDLEGVGLVVNYDVPSQAKTYVHRVGRTARAGLRGVAVTIAKKGQVKQFLQMRAGVDRKRVRLDASPADQSRILLLAGRYQRCLKDLKEVLEAERAGDLDPTA 1761
Q +P I+A++ + DIC+SAPTGSGKTL +V+ ++Q L+ R R+RAL++LPSRDLA+QVH + + + + T L+ GLAIGQ+NF EQ ALVG+++ G+ A+A GG S VDILVATPGRL+ XXXXXXXXXXXL+ +++DEADRLLNQSYQ W+ KV + + + V+ E G A G+ + R D + R R+R P L ++L SATLT NP+KLA + + N I + + ++G DG +E G K YSTP LEE + CD+ +KPLVLL LL E G LS+VFT+SV+STHRL RLLQL + EFSSSL Q+QRS ++ +AG V +VCSD MARGMD++ V VVNYDVPS KTY+HRVGRTARAG G +VT+ K GQ+K ++M D + L P Q + L RY L+ LK+ LEAE+AG L T+
Sbjct: 51 QAVAIPKILASDSD---RVTDICISAPTGSGKTLTYVVPIVQRLLPRVVCRVRALIVLPSRDLAVQVHQIVQHFVKDTPLKCGLAIGQSNFAVEQSALVGDIS--GEKGASATD-------------------------------GGRSLVDILVATPGRLVXXXXXXXXXXXXXLQIMIVDEADRLLNQSYQDWISKVYASVFNGQE--------------VDEE----------GLALGV--------GVTCRRQDSINRR--------RIRTP------LTRVLLSATLTRNPRKLAVIGMSNAELTKIGRIDDPLADNAKQGTDDDEEDG-------------------EEASGSAK---MYSTPTNLEEYWIECDTGSKPLVLLELLSEFAG---ALSIVFTASVNSTHRLARLLQLHS---------------------THPERIREFSSSLSQKQRSGLVADCKAGRVETVVCSDAMARGMDIDDVANVVNYDVPSFIKTYIHRVGRTARAGGHGRSVTLVKMGQMKGMMRMLKKADNNK--LKPYPLQQEHMKTLVPRYTEALQRLKDTLEAEKAGKLQATS 510
BLAST of mRNA_S-dermatodea_contig10962.633.1 vs. uniprot
Match: H3GNQ4_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GNQ4_PHYRM) HSP 1 Score: 306 bits (783), Expect = 1.340e-92 Identity = 231/588 (39.29%), Postives = 307/588 (52.21%), Query Frame = 1
Query: 1 QIRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRAVRLRALVLLPSRDLAMQVHSVFERYARGTGLRVGLAIGQTNFLEEQLALVGEVALAGDPVATAKASFLRGQGRHTGPDLTKSLPLDGRGEFTSVQAGGASEVDILVATPGRLLDHXXXXXXXXXXXLRYLVIDEADRLLNQSYQGWVGKVIKAAYRREPGTAAPISGEAKVGVVNSENDGRRAKPNDGTAAGIPRAEERPHAPSAVRLDPVTMRGRPLATGDRVRGPTVSTPPLRKLLFSATLTSNPQKLAGLDVVNPLIYTAKETVRTTGRRGRTSGAVDGGGEEHESRRPSQETRRSNLDEIGGDGKGKGQ-YSTPATLEETYTVCDSQAKPLVLLSLLRETLGRRKGLSVVFTSSVDSTHRLFRLLQLFGGFEGSDAAGGENGNXXXXXXXXXXSGVAEFSSSLGQRQRSHIIRRARAGDVRVIVCSDGMARGMDLEGVGLVVNYDVPSQAKTYVHRVGRTARAGLRGVAVTIAKKGQVKQFLQMRAGVDRKRVRLDASPADQSRILLLAGRYQRCLKDLKEVLEAERAGDLDPTA 1761
Q +P ++A++ + DIC+SAPTGSGKTL +V+ ++Q L+ R R+RAL++LPSRDLA+QVH + +++ R T L+ GLAIGQ+NF EQ ALVG+++ GD V+ S GG S VDILVATPGRL+ XXXXXXXXXXXL+ +++DEADRLLNQSYQ W+ KV + + + V+ E G A G+ + R D + R R+R P L ++L SATLT NP+KLA + + N + + A D E DE G D + YSTP L+E + CD+ +KPLVLL LL E G LS+VFT+SV+STHRL RLLQL+ + EFSS L Q+QRS ++ +AG V +VCSD MARGMD++ V VVNYDVPS KTY+HRVGRTARAG G +VT+ K GQ K ++M D + L P Q + L RY L+ LK+ LEAE+AG + T+
Sbjct: 45 QAVAIPKLLASDSD---RVTDICISAPTGSGKTLTYVVPIVQRLLPRVVCRVRALIVLPSRDLAVQVHQIVQQFCRHTPLKCGLAIGQSNFAVEQAALVGDIS--GDKVS-------------------------------STTDGGRSLVDILVATPGRLVXXXXXXXXXXXXXLQIMIVDEADRLLNQSYQDWIAKVYASVFNGQE--------------VDEE----------GLALGV--------GVTCRRQDSINRR--------RIRTP------LTRVLLSATLTRNPRKLAAIGMSNAELTKIGRIDDPLADNAKLGTAGDSDEE----------------DEEGEDASASNKMYSTPTNLDEFWIECDTGSKPLVLLELLSEFGG---ALSIVFTASVNSTHRLARLLQLYSSHP---------------------ERIREFSSGLSQKQRSALVADCKAGRVETVVCSDAMARGMDIDDVANVVNYDVPSFIKTYIHRVGRTARAGRHGRSVTLVKMGQTKGMMRMLKKADSNK--LKPYPLQQEHMKTLIPRYTAALQQLKDTLEAEKAGRIQATS 508
BLAST of mRNA_S-dermatodea_contig10962.633.1 vs. uniprot
Match: A0A5D6XXH1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXH1_9STRA) HSP 1 Score: 306 bits (785), Expect = 2.400e-92 Identity = 232/572 (40.56%), Postives = 299/572 (52.27%), Query Frame = 1
Query: 61 DICVSAPTGSGKTLVFVLGVLQALIRRRAVRLRALVLLPSRDLAMQVHSVFERYARGTGLRVGLAIGQTNFLEEQLALVGEVALAGDPVATAKASFLRGQGRHTGPDLTKSLPLDGRGEFTSVQAGGASEVDILVATPGRLLDHXXXXXXXXXXXLRYLVIDEADRLLNQSYQGWVGKVIKAAYRREPGTAAPISGEAKVGVVNSENDGRRAKPNDGTAAGIPRAEERPHAPSAVRLDPVTMRGRPLATGDRVRGPTVSTPPLRKLLFSATLTSNPQKLAGLDVVNP---LIYTAKETVRTTGRRGRTSGAVDGGGEEHESRRPSQETRRSNLDEIGGDGKGKGQYSTPATLEETYTVCDSQAKPLVLLSLLRETLGRRKGLSVVFTSSVDSTHRLFRLLQLFGGFEGSDAAGGENGNXXXXXXXXXXSGVAEFSSSLGQRQRSHIIRRARAGDVRVIVCSDGMARGMDLEGVGLVVNYDVPSQAKTYVHRVGRTARAGLRGVAVTIAKKGQVKQFLQMRAGVDRKRVRLDASPADQSRILLLAGRYQRCLKDLKEVLEAERAGDLDPTASV 1767
D+CV+APTGSGKTL +V+ ++Q L+ R R+RALV+LPSRDL +QVH+V + GT LRVG+AIGQ+NF EQ ALVG PV A A F G + GG S VDILVATPGRL+ XXXXXXXXXXXL+ LV+DEADRLLNQSYQ W+ K+ + +R + G P G G A L P T R + R+R P L ++L SATLT NP+KLA + + N I A + + R +GGG+ S G Y+TP+ LEE CD+ +KPLVLL +L G L++VFT+SV++THRL RLLQL + V E+SSSL Q+QRS ++ RA V V+VCSD MARGMD++ V VVNYDVP+ KTY+HRVGRTARAG G +VT+ K GQ+K +M + R L P + + L RY R L+ LK L+AE+AG L T+++
Sbjct: 86 DVCVNAPTGSGKTLAYVVPIVQRLLPRVVCRVRALVVLPSRDLVLQVHAVLSTFCAGTPLRVGIAIGQSNFAAEQAALVG-------PVDHAHALF---------------------GNSAGERDGGRSLVDILVATPGRLVXXXXXXXXXXXXXLQILVVDEADRLLNQSYQDWIPKIYASIFRGQDGP-----------------------PLQGAGGG------------AFPLAPTTSRRQDAINRRRIRTP------LTRVLLSATLTRNPRKLASIGMSNAELTKIGRADDVLADNAR--------EGGGDXXXXXXXXXXXXXS----------GAALYATPSNLEEFVVECDAGSKPLVLLEVLSAYAG---ALTIVFTASVNATHRLARLLQL---------------------CADDPARVREYSSSLTQKQRSALVAECRANRVEVVVCSDAMARGMDIDNVANVVNYDVPTFIKTYIHRVGRTARAGRAGRSVTLVKTGQMKALTRMLKKAENNR--LAPFPLRKEHMKTLVPRYTRALEQLKRTLDAEKAGKLSATSTL 544
BLAST of mRNA_S-dermatodea_contig10962.633.1 vs. uniprot
Match: A0A7S4QRG8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QRG8_9STRA) HSP 1 Score: 305 bits (781), Expect = 6.000e-92 Identity = 229/619 (37.00%), Postives = 305/619 (49.27%), Query Frame = 1
Query: 94 KTLVFVLGVLQALIRRRAVRLRALVLLPSRDLAMQVHSVFERYARGTGLRVGLAIGQTNFLEEQLALV-----------------GEVALAGDPVATAKASFLRGQGRHTGPDLTKSLPLDGRGEFTSVQAGGASEVDILVATPGRLLDHXXXXXXXXXXXLRYLVIDEADRLLNQSYQGWVGKVIKAAYRREPGTAAPISGEAKVGVVNSENDGRRAKPNDGTAAGIPRAEERPHAPSAVRLDPVTMRGRPLA----------TGDRVRGPTVSTPPLRKLLFSATLTSNPQKLAGLDVVNPLIYTAKET-VRTTGRRGRTSGAVDGGGEEHESRRPSQETRRSNLDEIGGDGKGKGQYSTPATLEETYTVCDSQAKPLVLLSLLRETLGRR------KGLSVVFTSSVDSTHRLFRLLQLFGGFEGSDAAGGENGNXXXXXXXXXXSGVAEFSSSLGQRQRSHIIRRARAG--------------------------DVRVIVCSDGMARGMDLEGVGLVVNYDVPSQAKTYVHRVGRTARAGLRGVAVTIAKKGQVKQFLQMRAGVDRKRVRLDASPADQSRILLLAGRYQRCLKDLKEVLEAERAGDLDPTASVT 1770
KTL FVL VL +L R RLRALV+LPSRDLA QV++VF+RY +G+ L VGLAIGQ +F EQ +LV ++ A DP+ T A + ++ + S+ G S VD+LVATPGRL+DH LR+LVIDEADRL+NQSYQ W+G+V++AA A+ GV ++ DG A + R E S + LDP+T R + T V T PLRKLLFSATLT +PQKLA L +VNP + A VRT ++ + + + +YS P L E C +Q KPLVLL+LL E G+ VVFT+S+DSTHRL RLLQ+ G +A S VAEFSS+L Q+QR ++RR + V+VCSDGM+RGMD+ V V+NYDVP AKTYVHR GRTARAG +G A+++ K GQV +F +MR +DR R++ + + + YQ C++ L+ V++AE G+LD A +T
Sbjct: 1 KTLGFVLPVLNSLSTRVVKRLRALVVLPSRDLASQVYNVFDRYTQGSDLCVGLAIGQKDFATEQKSLVLGDDNAGLCSSSYDHDTAQIQYALDPINTHSALEI----------FDYDADINVTSKKCSLPRAGRSAVDVLVATPGRLMDHIEKTPGFTLQHLRFLVIDEADRLVNQSYQNWIGRVMRAA-----SAASAFDSCGDSGVNDNNKDGHSA---------VTRLETASDRTSLI-LDPITWRKGGMDGTSFDTNATNTASFVPAAVCQTVPLRKLLFSATLTKDPQKLASLGLVNPKHFDAHRLKVRTN-------------------------------NDSNDNMESQQRYSVPEHLSEFMVECTAQQKPLVLLALLLEQYQTNIRTHQPNGIIVVFTASLDSTHRLTRLLQILWESGGYGSA----------------SSVAEFSSALTQKQRGRLLRRCTGSVEDVTASKNRNNKKKKIQQEDHDQQHPISVVVCSDGMSRGMDIPSVSAVINYDVPGFAKTYVHRCGRTARAGRKGKAISVLKDGQVTKFFKMRELIDRPD-RVNKMGVRKDLVQNIVPIYQSCMRSLRRVMQAENDGELDTIAPLT 546 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10962.633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10962.633.1 >prot_S-dermatodea_contig10962.633.1 ID=prot_S-dermatodea_contig10962.633.1|Name=mRNA_S-dermatodea_contig10962.633.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=532bp MQVHSVFERYARGTGLRVGLAIGQTNFLEEQLALVGEVALAGDPVATAKAback to top mRNA from alignment at S-dermatodea_contig10962:797..5627+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10962.633.1 ID=mRNA_S-dermatodea_contig10962.633.1|Name=mRNA_S-dermatodea_contig10962.633.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4831bp|location=Sequence derived from alignment at S-dermatodea_contig10962:797..5627+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10962:797..5627+ >mRNA_S-dermatodea_contig10962.633.1 ID=mRNA_S-dermatodea_contig10962.633.1|Name=mRNA_S-dermatodea_contig10962.633.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3192bp|location=Sequence derived from alignment at S-dermatodea_contig10962:797..5627+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |