mRNA_S-dermatodea_contig10935.621.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10935.621.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 218 bits (554), Expect = 1.060e-65 Identity = 105/232 (45.26%), Postives = 150/232 (64.66%), Query Frame = 3
Query: 3 CRKMVEDLHHVHVRLLEEDDLKEVMEQYRRKGFPGAMGSVDVSHVYWDRAPASEHCDHSGKEGKPTLAYQAIVDFTRRVLANSDGFAGAENDKTISRHDEALEVIRGQKPYTTQGFELYDASGTKQQRHGCYIICDGGYLKWPMIQCPMKTPSTVEAAAFSKQQESFRKDVECLFVILKGRSRFRKSSVLYQDKDFIDDVFSACCVLHNILHAWDGLAGLEPDTD*AGADGV 698
C+ +L+ +V L +DL++VMEQY R GFPGA+GS DV+H+YW P ++ ++GKEGKPT+A+Q VD + RVLA + GF GA NDKTI R+D+A+ IR YT Q ++LY G + + GCY++ D GY KW + P K P FSK+ ES RKDVEC F ILKGR R K ++ + +++ID+VF CC+LHN+LH++D + + + AG+ G+
Sbjct: 119 CKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGL 350
BLAST of mRNA_S-dermatodea_contig10935.621.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 218 bits (554), Expect = 1.000e-64 Identity = 105/232 (45.26%), Postives = 150/232 (64.66%), Query Frame = 3
Query: 3 CRKMVEDLHHVHVRLLEEDDLKEVMEQYRRKGFPGAMGSVDVSHVYWDRAPASEHCDHSGKEGKPTLAYQAIVDFTRRVLANSDGFAGAENDKTISRHDEALEVIRGQKPYTTQGFELYDASGTKQQRHGCYIICDGGYLKWPMIQCPMKTPSTVEAAAFSKQQESFRKDVECLFVILKGRSRFRKSSVLYQDKDFIDDVFSACCVLHNILHAWDGLAGLEPDTD*AGADGV 698
C+ +L+ +V L +DL++VMEQY R GFPGA+GS DV+H+YW P ++ ++GKEGKPT+A+Q VD + RVLA + GF GA NDKTI R+D+A+ IR YT Q ++LY G + + GCY++ D GY KW + P K P FSK+ ES RKDVEC F ILKGR R K ++ + +++ID+VF CC+LHN+LH++D + + + AG+ G+
Sbjct: 210 CKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGL 441
BLAST of mRNA_S-dermatodea_contig10935.621.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 212 bits (539), Expect = 6.340e-63 Identity = 105/231 (45.45%), Postives = 143/231 (61.90%), Query Frame = 3
Query: 3 CRKMVEDLHHVHVRLLEED--DLKEVMEQYRRKGFPGAMGSVDVSHVYWDRAPASEHCDHSGKEGKPTLAYQAIVDFTRRVLANSDGFAGAENDKTISRHDEALEVIRGQKPYTTQGFELYDASGTKQQRHGCYIICDGGYLKWPMIQCPMKTPSTVEAAAFSKQQESFRKDVECLFVILKGRSRFRKSSVLYQDKDFIDDVFSACCVLHNILHAWDGLAGLEPDTD*AGA 689
C +++ H+ L E+ +L VM QY + GFPGAMGS DV+H+ W R P ++ ++GKEGKPT+ YQ V+ RVLA ++GF G+ NDKTI DEA++ IR K Y + F ++ GT + GCY+I D GY KW M+ P K P + FSK+ ES RKDVEC F ILK R R K ++ YQ ++ +D VF CC+LHN+LH DG+ GLE D + G+
Sbjct: 163 CEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGS 393
BLAST of mRNA_S-dermatodea_contig10935.621.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 207 bits (526), Expect = 6.810e-63 Identity = 100/223 (44.84%), Postives = 139/223 (62.33%), Query Frame = 3
Query: 30 HVHVRLLEEDDLKEVMEQYRRKGFPGAMGSVDVSHVYWDRAPASEHCDHSGKEGKPTLAYQAIVDFTRRVLANSDGFAGAENDKTISRHDEALEVIRGQKPYTTQGFELYDASGTKQQRHGCYIICDGGYLKWPMIQCPMKTPSTVEAAAFSKQQESFRKDVECLFVILKGRSRFRKSSVLYQDKDFIDDVFSACCVLHNILHAWDGLAGLEPDTD*AGADGV 698
H+H+ E L V+EQY R GF GAMGS+DV+H+ W R P ++ ++GKEG PT+ YQ VD R +A ++GF G+ NDKT D A+E IR K YT + F++Y+ GT GCY++ D GY KW ++ P K P + FSK+ ES RKDVEC F ILKGR R ++ +Q ++ ID+VF CC+LHN+LH +DG+ L +T+ + GV
Sbjct: 5 HIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGV 227
BLAST of mRNA_S-dermatodea_contig10935.621.1 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE) HSP 1 Score: 205 bits (521), Expect = 3.640e-62 Identity = 97/231 (41.99%), Postives = 144/231 (62.34%), Query Frame = 3
Query: 3 CRKMVEDLHHVHVRLLEEDDLKEVMEQYRRKGFPGAMGSVDVSHVYWDRAPASEHCDHSGKEGKPTLAYQAIVDFTRRVLANSDGFAGAENDKTISRHDEALEVIRGQKPYTTQGFELYDASGTKQQRHGCYIICDGGYLKWPMIQCPMKTPSTVEAAAFSKQQESFRKDVECLFVILKGRSRFRKSSVLYQDKDFIDDVFSACCVLHNILHAWDGLAGLEPDTD*AGADG 695
C L +RL E +DL+ V YR G+PGA+GS+D +HV W+R SE H GKEG T+ ++AI D R+LA++ G+ GAENDKT+ + D ++ + G++P+ + +E+YD +G + G ++I +GGY + P++ CP K + V +SK+ ES RKD+ECLF LKGR R K+ +L+ D+ IDD + C++HN+L A+DGL LE D D G DG
Sbjct: 14 CHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIAEGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDG 244
BLAST of mRNA_S-dermatodea_contig10935.621.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE) HSP 1 Score: 204 bits (518), Expect = 5.020e-59 Identity = 97/231 (41.99%), Postives = 143/231 (61.90%), Query Frame = 3
Query: 3 CRKMVEDLHHVHVRLLEEDDLKEVMEQYRRKGFPGAMGSVDVSHVYWDRAPASEHCDHSGKEGKPTLAYQAIVDFTRRVLANSDGFAGAENDKTISRHDEALEVIRGQKPYTTQGFELYDASGTKQQRHGCYIICDGGYLKWPMIQCPMKTPSTVEAAAFSKQQESFRKDVECLFVILKGRSRFRKSSVLYQDKDFIDDVFSACCVLHNILHAWDGLAGLEPDTD*AGADG 695
C L +RL E + L+ V YR G+PGA+GS+D +HV W+R SE H GKEG T+ ++AI D R+LA++ G+ GAENDKT+ + D ++ + G++P+ + +E+YD +G + G ++I DGGY + P++ CP K + V +SK+ ES RKD+ECLF LKGR R K+ +L+ D+ IDD + C++HN+L A+DGL LE D D G DG
Sbjct: 246 CHCFAAGLWRTWIRLPEGEGLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDG 476
BLAST of mRNA_S-dermatodea_contig10935.621.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 196 bits (497), Expect = 2.340e-57 Identity = 94/226 (41.59%), Postives = 137/226 (60.62%), Query Frame = 3
Query: 3 CRKMVEDLHHVHVRLLEED--DLKEVMEQYRRKGFPGAMGSVDVSHVYWDRAPASEHCDHSGKEGKPTLAYQAIVDFTRRVLANSDGFAGAENDKTISRHDEALEVIRGQKPYTTQGFELYDASGTKQQRHGCYIICDGGYLKWPMIQCPMKTPSTVEAAAFSKQQESFRKDVECLFVILKGRSRFRKSSVLYQDKDFIDDVFSACCVLHNILHAWDGLAGLEPDT 674
C+ +++ H+ L E +L VM+QY R GF GAMGS+DV+H+ W + P + ++GKEG PT+ YQ V+ R +A ++GF + NDKT D +E IR YT + F++Y+ GT GCY++ D GY KW ++ P K P + FSK+ ES RKDVEC F ILKG R +K ++ Y +++ ID+VF CC+LHN+LH +DG+ L +T
Sbjct: 134 CKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENT 359
BLAST of mRNA_S-dermatodea_contig10935.621.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 194 bits (492), Expect = 3.060e-56 Identity = 97/231 (41.99%), Postives = 140/231 (60.61%), Query Frame = 3
Query: 3 CRKMVEDLHHVHVRLLEEDDLKEVMEQYRRKGFPGAMGSVDVSHVYWDRAPASEHCDHSGKEGKPTLAYQAIVDFTRRVLANSDGFAGAENDKTISRHDEALEVIRGQKPYTTQGFELYDASGTKQQRHGCYIICDGGYLKWPMIQCPMKTPSTVEAAAFSKQQESFRKDVECLFVILKGRSRFRKSSVLYQDKDFIDDVFSACCVLHNILHAWDGLAGLEPDTD*AGADG 695
C L H V L E + LK+V +Y G PGA+ SVD +H+ W P SE H GKEG TL Y+A D + R+L+++ GF GAENDKT+ + D ++ +R ++P+ + F L+D G + G ++I DGGY + P + CP K ++ +SK+ ES RKD+ECLF LKGR R K+ +L+ ++ ID+ + C++HN+LH +DGLA LE D D AG DG
Sbjct: 148 CDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNMLHQFDGLANLEKDVDWAGKDG 378
BLAST of mRNA_S-dermatodea_contig10935.621.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 184 bits (467), Expect = 4.040e-53 Identity = 96/231 (41.56%), Postives = 134/231 (58.01%), Query Frame = 3
Query: 3 CRKMVEDLHHVHVRLLEEDDLKEVMEQYRRKGFPGAMGSVDVSHVYWDRAPASEHCDHSGKEGKPTLAYQAIVDFTRRVLANSDGFAGAENDKTISRHDEALEVIRGQKPYTTQGFELYDASGTKQQRHGCYIICDGGYLKWPMIQCPMKTPSTVEAAAFSKQQESFRKDVECLFVILKGRSRFRKSSVLYQDKDFIDDVFSACCVLHNILHAWDGLAGLEPDTD*AGADG 695
CR ++ H+ L L EVM + + G+ GA GS DV+H+ W+ P + +GKEG PT+AY VD R LA ++GF GA NDKTI R+D + IR YT + ++L A+GTK+ R GC++I D GY +W + P K P E AFS+ ES RKDV C F ILK R + K ++++D++F CC+LHN+LH +DGL E +TD G+ G
Sbjct: 72 CRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGC-FRILKLRMPYHK-------REYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAG 294
BLAST of mRNA_S-dermatodea_contig10935.621.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 174 bits (440), Expect = 1.570e-49 Identity = 93/234 (39.74%), Postives = 132/234 (56.41%), Query Frame = 3
Query: 3 CRKMVEDLH--HVHVRLLEEDDLKEVMEQYRRKGFPGAMGSVDVSHVYWDRAPASEHCDHSGKEGKPTLAYQAIVDFTRRVLANSDGFAGAENDKTISRHDEALEVIRGQKPYTTQGFELYDASGTKQQRHGCYIICDGGYLKWPMIQCPMKTPSTVEAAAFSKQQESFRKDVECLFVILKGRSRFRKSSVLYQDKDFIDDVFSACCVLHNILHAWDGLAGLEPDTD*AGADGV 698
CR +++ H+H+ E L VM+QY R G P ++ ++GK+ PT+AYQ VD R +A ++GF G+ NDKTI D A++ IR K YT + F+LY+ GT GCY + D GY KW ++ P K P + + FSK+ ES RKDVEC F ILKGR R K ++ YQ ++ ID+VF CC+LHN+LH +DG+ L +T+ + GV
Sbjct: 56 CRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGV 272 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10935.621.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10935.621.1 >prot_S-dermatodea_contig10935.621.1 ID=prot_S-dermatodea_contig10935.621.1|Name=mRNA_S-dermatodea_contig10935.621.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=223bp MVEDLHHVHVRLLEEDDLKEVMEQYRRKGFPGAMGSVDVSHVYWDRAPASback to top mRNA from alignment at S-dermatodea_contig10935:5214..6736- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10935.621.1 ID=mRNA_S-dermatodea_contig10935.621.1|Name=mRNA_S-dermatodea_contig10935.621.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1523bp|location=Sequence derived from alignment at S-dermatodea_contig10935:5214..6736- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10935:5214..6736- >mRNA_S-dermatodea_contig10935.621.1 ID=mRNA_S-dermatodea_contig10935.621.1|Name=mRNA_S-dermatodea_contig10935.621.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1338bp|location=Sequence derived from alignment at S-dermatodea_contig10935:5214..6736- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |