mRNA_S-dermatodea_contig10935.621.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig10935.621.1
Unique NamemRNA_S-dermatodea_contig10935.621.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig10935.621.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 1.060e-65
Identity = 105/232 (45.26%), Postives = 150/232 (64.66%), Query Frame = 3
Query:    3 CRKMVEDLHHVHVRLLEEDDLKEVMEQYRRKGFPGAMGSVDVSHVYWDRAPASEHCDHSGKEGKPTLAYQAIVDFTRRVLANSDGFAGAENDKTISRHDEALEVIRGQKPYTTQGFELYDASGTKQQRHGCYIICDGGYLKWPMIQCPMKTPSTVEAAAFSKQQESFRKDVECLFVILKGRSRFRKSSVLYQDKDFIDDVFSACCVLHNILHAWDGLAGLEPDTD*AGADGV 698
            C+    +L+  +V L   +DL++VMEQY R GFPGA+GS DV+H+YW   P ++   ++GKEGKPT+A+Q  VD + RVLA + GF GA NDKTI R+D+A+  IR    YT Q ++LY   G + +  GCY++ D GY KW  +  P K P       FSK+ ES RKDVEC F ILKGR R  K ++ +  +++ID+VF  CC+LHN+LH++D    +  + + AG+ G+
Sbjct:  119 CKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGL 350          
BLAST of mRNA_S-dermatodea_contig10935.621.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 1.000e-64
Identity = 105/232 (45.26%), Postives = 150/232 (64.66%), Query Frame = 3
Query:    3 CRKMVEDLHHVHVRLLEEDDLKEVMEQYRRKGFPGAMGSVDVSHVYWDRAPASEHCDHSGKEGKPTLAYQAIVDFTRRVLANSDGFAGAENDKTISRHDEALEVIRGQKPYTTQGFELYDASGTKQQRHGCYIICDGGYLKWPMIQCPMKTPSTVEAAAFSKQQESFRKDVECLFVILKGRSRFRKSSVLYQDKDFIDDVFSACCVLHNILHAWDGLAGLEPDTD*AGADGV 698
            C+    +L+  +V L   +DL++VMEQY R GFPGA+GS DV+H+YW   P ++   ++GKEGKPT+A+Q  VD + RVLA + GF GA NDKTI R+D+A+  IR    YT Q ++LY   G + +  GCY++ D GY KW  +  P K P       FSK+ ES RKDVEC F ILKGR R  K ++ +  +++ID+VF  CC+LHN+LH++D    +  + + AG+ G+
Sbjct:  210 CKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGL 441          
BLAST of mRNA_S-dermatodea_contig10935.621.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 6.340e-63
Identity = 105/231 (45.45%), Postives = 143/231 (61.90%), Query Frame = 3
Query:    3 CRKMVEDLHHVHVRLLEED--DLKEVMEQYRRKGFPGAMGSVDVSHVYWDRAPASEHCDHSGKEGKPTLAYQAIVDFTRRVLANSDGFAGAENDKTISRHDEALEVIRGQKPYTTQGFELYDASGTKQQRHGCYIICDGGYLKWPMIQCPMKTPSTVEAAAFSKQQESFRKDVECLFVILKGRSRFRKSSVLYQDKDFIDDVFSACCVLHNILHAWDGLAGLEPDTD*AGA 689
            C     +++  H+ L  E+  +L  VM QY + GFPGAMGS DV+H+ W R P ++   ++GKEGKPT+ YQ  V+   RVLA ++GF G+ NDKTI   DEA++ IR  K Y  + F ++   GT +   GCY+I D GY KW M+  P K P +     FSK+ ES RKDVEC F ILK R R  K ++ YQ ++ +D VF  CC+LHN+LH  DG+ GLE D +  G+
Sbjct:  163 CEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGS 393          
BLAST of mRNA_S-dermatodea_contig10935.621.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 6.810e-63
Identity = 100/223 (44.84%), Postives = 139/223 (62.33%), Query Frame = 3
Query:   30 HVHVRLLEEDDLKEVMEQYRRKGFPGAMGSVDVSHVYWDRAPASEHCDHSGKEGKPTLAYQAIVDFTRRVLANSDGFAGAENDKTISRHDEALEVIRGQKPYTTQGFELYDASGTKQQRHGCYIICDGGYLKWPMIQCPMKTPSTVEAAAFSKQQESFRKDVECLFVILKGRSRFRKSSVLYQDKDFIDDVFSACCVLHNILHAWDGLAGLEPDTD*AGADGV 698
            H+H+   E   L  V+EQY R GF GAMGS+DV+H+ W R P ++   ++GKEG PT+ YQ  VD   R +A ++GF G+ NDKT    D A+E IR  K YT + F++Y+  GT     GCY++ D GY KW ++  P K P +     FSK+ ES RKDVEC F ILKGR R    ++ +Q ++ ID+VF  CC+LHN+LH +DG+  L  +T+   + GV
Sbjct:    5 HIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGV 227          
BLAST of mRNA_S-dermatodea_contig10935.621.1 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 3.640e-62
Identity = 97/231 (41.99%), Postives = 144/231 (62.34%), Query Frame = 3
Query:    3 CRKMVEDLHHVHVRLLEEDDLKEVMEQYRRKGFPGAMGSVDVSHVYWDRAPASEHCDHSGKEGKPTLAYQAIVDFTRRVLANSDGFAGAENDKTISRHDEALEVIRGQKPYTTQGFELYDASGTKQQRHGCYIICDGGYLKWPMIQCPMKTPSTVEAAAFSKQQESFRKDVECLFVILKGRSRFRKSSVLYQDKDFIDDVFSACCVLHNILHAWDGLAGLEPDTD*AGADG 695
            C      L    +RL E +DL+ V   YR  G+PGA+GS+D +HV W+R   SE   H GKEG  T+ ++AI D   R+LA++ G+ GAENDKT+ + D ++  + G++P+ +  +E+YD +G   +  G ++I +GGY + P++ CP K  + V    +SK+ ES RKD+ECLF  LKGR R  K+ +L+ D+  IDD +   C++HN+L A+DGL  LE D D  G DG
Sbjct:   14 CHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIAEGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDG 244          
BLAST of mRNA_S-dermatodea_contig10935.621.1 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 5.020e-59
Identity = 97/231 (41.99%), Postives = 143/231 (61.90%), Query Frame = 3
Query:    3 CRKMVEDLHHVHVRLLEEDDLKEVMEQYRRKGFPGAMGSVDVSHVYWDRAPASEHCDHSGKEGKPTLAYQAIVDFTRRVLANSDGFAGAENDKTISRHDEALEVIRGQKPYTTQGFELYDASGTKQQRHGCYIICDGGYLKWPMIQCPMKTPSTVEAAAFSKQQESFRKDVECLFVILKGRSRFRKSSVLYQDKDFIDDVFSACCVLHNILHAWDGLAGLEPDTD*AGADG 695
            C      L    +RL E + L+ V   YR  G+PGA+GS+D +HV W+R   SE   H GKEG  T+ ++AI D   R+LA++ G+ GAENDKT+ + D ++  + G++P+ +  +E+YD +G   +  G ++I DGGY + P++ CP K  + V    +SK+ ES RKD+ECLF  LKGR R  K+ +L+ D+  IDD +   C++HN+L A+DGL  LE D D  G DG
Sbjct:  246 CHCFAAGLWRTWIRLPEGEGLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDG 476          
BLAST of mRNA_S-dermatodea_contig10935.621.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 2.340e-57
Identity = 94/226 (41.59%), Postives = 137/226 (60.62%), Query Frame = 3
Query:    3 CRKMVEDLHHVHVRLLEED--DLKEVMEQYRRKGFPGAMGSVDVSHVYWDRAPASEHCDHSGKEGKPTLAYQAIVDFTRRVLANSDGFAGAENDKTISRHDEALEVIRGQKPYTTQGFELYDASGTKQQRHGCYIICDGGYLKWPMIQCPMKTPSTVEAAAFSKQQESFRKDVECLFVILKGRSRFRKSSVLYQDKDFIDDVFSACCVLHNILHAWDGLAGLEPDT 674
            C+    +++  H+ L  E   +L  VM+QY R GF GAMGS+DV+H+ W + P +    ++GKEG PT+ YQ  V+   R +A ++GF  + NDKT    D  +E IR    YT + F++Y+  GT     GCY++ D GY KW ++  P K P +     FSK+ ES RKDVEC F ILKG  R +K ++ Y +++ ID+VF  CC+LHN+LH +DG+  L  +T
Sbjct:  134 CKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENT 359          
BLAST of mRNA_S-dermatodea_contig10935.621.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 3.060e-56
Identity = 97/231 (41.99%), Postives = 140/231 (60.61%), Query Frame = 3
Query:    3 CRKMVEDLHHVHVRLLEEDDLKEVMEQYRRKGFPGAMGSVDVSHVYWDRAPASEHCDHSGKEGKPTLAYQAIVDFTRRVLANSDGFAGAENDKTISRHDEALEVIRGQKPYTTQGFELYDASGTKQQRHGCYIICDGGYLKWPMIQCPMKTPSTVEAAAFSKQQESFRKDVECLFVILKGRSRFRKSSVLYQDKDFIDDVFSACCVLHNILHAWDGLAGLEPDTD*AGADG 695
            C      L H  V L E + LK+V  +Y   G PGA+ SVD +H+ W   P SE   H GKEG  TL Y+A  D + R+L+++ GF GAENDKT+ + D ++  +R ++P+ +  F L+D  G   +  G ++I DGGY + P + CP K  ++     +SK+ ES RKD+ECLF  LKGR R  K+ +L+  ++ ID+ +   C++HN+LH +DGLA LE D D AG DG
Sbjct:  148 CDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNMLHQFDGLANLEKDVDWAGKDG 378          
BLAST of mRNA_S-dermatodea_contig10935.621.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 4.040e-53
Identity = 96/231 (41.56%), Postives = 134/231 (58.01%), Query Frame = 3
Query:    3 CRKMVEDLHHVHVRLLEEDDLKEVMEQYRRKGFPGAMGSVDVSHVYWDRAPASEHCDHSGKEGKPTLAYQAIVDFTRRVLANSDGFAGAENDKTISRHDEALEVIRGQKPYTTQGFELYDASGTKQQRHGCYIICDGGYLKWPMIQCPMKTPSTVEAAAFSKQQESFRKDVECLFVILKGRSRFRKSSVLYQDKDFIDDVFSACCVLHNILHAWDGLAGLEPDTD*AGADG 695
            CR    ++   H+ L     L EVM  + + G+ GA GS DV+H+ W+  P +     +GKEG PT+AY   VD   R LA ++GF GA NDKTI R+D  +  IR    YT + ++L  A+GTK+ R GC++I D GY +W  +  P K P   E  AFS+  ES RKDV C F ILK R  + K       ++++D++F  CC+LHN+LH +DGL   E +TD  G+ G
Sbjct:   72 CRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGC-FRILKLRMPYHK-------REYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAG 294          
BLAST of mRNA_S-dermatodea_contig10935.621.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 1.570e-49
Identity = 93/234 (39.74%), Postives = 132/234 (56.41%), Query Frame = 3
Query:    3 CRKMVEDLH--HVHVRLLEEDDLKEVMEQYRRKGFPGAMGSVDVSHVYWDRAPASEHCDHSGKEGKPTLAYQAIVDFTRRVLANSDGFAGAENDKTISRHDEALEVIRGQKPYTTQGFELYDASGTKQQRHGCYIICDGGYLKWPMIQCPMKTPSTVEAAAFSKQQESFRKDVECLFVILKGRSRFRKSSVLYQDKDFIDDVFSACCVLHNILHAWDGLAGLEPDTD*AGADGV 698
            CR    +++  H+H+   E   L  VM+QY R G                  P ++   ++GK+  PT+AYQ  VD   R +A ++GF G+ NDKTI   D A++ IR  K YT + F+LY+  GT     GCY + D GY KW ++  P K P + +   FSK+ ES RKDVEC F ILKGR R  K ++ YQ ++ ID+VF  CC+LHN+LH +DG+  L  +T+   + GV
Sbjct:   56 CRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGV 272          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10935.621.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KY50_9PHAE1.060e-6545.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE1.000e-6445.26Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE6.340e-6345.45Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7FSK2_ECTSI6.810e-6344.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRU1_9PHAE3.640e-6241.99Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L0H2_9PHAE5.020e-5941.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHI0_9PHAE2.340e-5741.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV45_9PHAE3.060e-5641.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K796_9PHAE4.040e-5341.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUX7_9PHAE1.570e-4939.74DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10935contigS-dermatodea_contig10935:5214..6736 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score208.0
Seed ortholog evalue4.6e-51
Seed eggNOG ortholog2880.D7FSK2
EggNOG free text desc.Plant transposon protein
EggNOG OGs2E2RF@1,2S9YA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size708
Cds size669
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10935.621.1prot_S-dermatodea_contig10935.621.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig10935 5242..6725 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924180.8174067-UTR-S-dermatodea_contig10935:5213..52411622924180.8174067-UTR-S-dermatodea_contig10935:5213..5241Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10935 5214..5241 -
1694079073.6000416-UTR-S-dermatodea_contig10935:5213..52411694079073.6000416-UTR-S-dermatodea_contig10935:5213..5241Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10935 5214..5241 -
1622924180.8453326-UTR-S-dermatodea_contig10935:6725..67361622924180.8453326-UTR-S-dermatodea_contig10935:6725..6736Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10935 6726..6736 -
1694079073.6350887-UTR-S-dermatodea_contig10935:6725..67361694079073.6350887-UTR-S-dermatodea_contig10935:6725..6736Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig10935 6726..6736 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924180.8257377-CDS-S-dermatodea_contig10935:5241..54961622924180.8257377-CDS-S-dermatodea_contig10935:5241..5496Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10935 5242..5496 -
1694079073.6149719-CDS-S-dermatodea_contig10935:5241..54961694079073.6149719-CDS-S-dermatodea_contig10935:5241..5496Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10935 5242..5496 -
1622924180.8355994-CDS-S-dermatodea_contig10935:6311..67251622924180.8355994-CDS-S-dermatodea_contig10935:6311..6725Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10935 6312..6725 -
1694079073.6255891-CDS-S-dermatodea_contig10935:6311..67251694079073.6255891-CDS-S-dermatodea_contig10935:6311..6725Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig10935 6312..6725 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig10935.621.1

>prot_S-dermatodea_contig10935.621.1 ID=prot_S-dermatodea_contig10935.621.1|Name=mRNA_S-dermatodea_contig10935.621.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=223bp
MVEDLHHVHVRLLEEDDLKEVMEQYRRKGFPGAMGSVDVSHVYWDRAPAS
EHCDHSGKEGKPTLAYQAIVDFTRRVLANSDGFAGAENDKTISRHDEALE
VIRGQKPYTTQGFELYDASGTKQQRHGCYIICDGGYLKWPMIQCPMKTPS
TVEAAAFSKQQESFRKDVECLFVILKGRSRFRKSSVLYQDKDFIDDVFSA
CCVLHNILHAWDGLAGLEPDTD*
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mRNA from alignment at S-dermatodea_contig10935:5214..6736-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig10935.621.1 ID=mRNA_S-dermatodea_contig10935.621.1|Name=mRNA_S-dermatodea_contig10935.621.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1523bp|location=Sequence derived from alignment at S-dermatodea_contig10935:5214..6736- (Saccorhiza dermatodea SderLu1190fm monoicous)
TCTGCAGGAAGATGGTGGAGGACTTACATCACGTACACGTCCGACTCCTC GAGGAGGACGATCTCAAGGAGGTCATGGAGCAGTACCGCAGGAAGGGGTT TCCGGGCGCCATGGGGTCGGTTGATGTGTCCCATGTCTATTGGGACAGAG CGCCGGCAAGTGAGCACTGCGATCACTCGGGGAAGGAGGGGAAGCCGACG TTGGCTTATCAGGCCATCGTCGATTTCACGCGGCGTGTCCTGGCGAACTC CGATGGCTTTGCTGGCGCGGAAAACGACAAGACCATTTCGCGGCATGATG AGGCGCTGGAGGTTATTCGCGGCCAGAAGCCGTACACAACACAAGGGTTC GAGCTTTACGACGCGAGTGGAACGAAGCAGCAACGCCACGGGTGTTATAT CATTTGCGATGGAGGGTACCTCAAGGTAGGTTGGCGTCTATGGTGCACAC GGAAACAATTCACGAGGCGCATCTCTGGTCTGGTAGCTACGGCAGTTTGA TACCGTCTGCGTAAACTGTGCATGCGTCCGCAGCGATTCCGACTGTTGTG TTTATTTCGCCTCCCTTGCGATATGTCTAATCCAGGTTACTTTTAGTTCG CTCTCTTTCTTATCAACTGGTATTGAAGTCGCCGGGTTCTGGCAGGGCCT CCAAGAACGGTTCACACGTTGTACTGCTTGGCGCAACTCGCACTTTTTTG TAGCAAGGTAGGAGAACCGATTGACTATCGGCGATCGATCTTGTGGGAAC AGTGCTCCATCCTCCCGAAGACACGTGGTCCACGACCAATAAAAAGGCAT GCAAAACTTGAGCACCGCCCCCCCCTCCCCCCCTCCCGTCTACAATACTA CAAAAACGCCGCAGAGTAAATACCTGAGGGTGTCTTCTTCCTCCCGGAAA AAAGACGACGCGCAAAAACGATCAATTTTCGTCCCATTTTGGTCTTCTGC GAGAGTGCTGTAGTCAAAAGTTTGGAGTGAGTCGCAGCCTTCCGTCAGAT ACGGGGTGCGACATTTAATCAACCCGATATGAACGTTTCTGGTACTATTT GCACTTGTAGTTTTTCAGGAAATACCTCCTTCGCCTCGAAGTTATTCGAT AGATGCAACGGCGATACTGTTCGAGTCTGAACATCACCTCCCGCCCCCTG AAACGAAATCACTGTACTGGGGTGATAAACGTGTGTGCAACCCCCCCCCC CTGACCCCCCCCCCCCCCTATCATCGCTTGTATTGTCCAGTGGCCCATGA TACAGTGTCCCATGAAGACGCCAAGTACTGTCGAGGCAGCCGCATTTAGC AAGCAGCAGGAGAGCTTCCGGAAGGATGTGGAGTGTCTCTTTGTCATCTT GAAGGGCCGCTCCAGGTTCCGGAAGTCTTCAGTCCTCTACCAGGACAAAG ACTTCATCGACGATGTTTTCTCCGCGTGCTGCGTCCTGCACAACATTCTA CACGCATGGGATGGACTGGCGGGGCTGGAGCCTGACACGGACTGAGCTGG CGCGGACGGCGTGCCCGAGGGCG
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Coding sequence (CDS) from alignment at S-dermatodea_contig10935:5214..6736-

>mRNA_S-dermatodea_contig10935.621.1 ID=mRNA_S-dermatodea_contig10935.621.1|Name=mRNA_S-dermatodea_contig10935.621.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1338bp|location=Sequence derived from alignment at S-dermatodea_contig10935:5214..6736- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGTGGAGGACTTACATCACGTACACGTCCGACTCCTCGAGGAGGACGA
TCTCAAGGAGGTCATGGAGCAGTACCGCAGGAAGGGGTTTCCGGGCGCCA
TGGGGTCGGTTGATGTGTCCCATGTCTATTGGGACAGAGCGCCGGCAAGT
GAGCACTGCGATCACTCGGGGAAGGAGGGGAAGCCGACGTTGGCTTATCA
GGCCATCGTCGATTTCACGCGGCGTGTCCTGGCGAACTCCGATGGCTTTG
CTGGCGCGGAAAACGACAAGACCATTTCGCGGCATGATGAGGCGCTGGAG
GTTATTCGCGGCCAGAAGCCGTACACAACACAAGGGTTCGAGCTTTACGA
CGCGAGTGGAACGAAGCAGCAACGCCACGGGTGTTATATCATTTGCGATG
GAGGGTACCTCAAGATGGTGGAGGACTTACATCACGTACACGTCCGACTC
CTCGAGGAGGACGATCTCAAGGAGGTCATGGAGCAGTACCGCAGGAAGGG
GTTTCCGGGCGCCATGGGGTCGGTTGATGTGTCCCATGTCTATTGGGACA
GAGCGCCGGCAAGTGAGCACTGCGATCACTCGGGGAAGGAGGGGAAGCCG
ACGTTGGCTTATCAGGCCATCGTCGATTTCACGCGGCGTGTCCTGGCGAA
CTCCGATGGCTTTGCTGGCGCGGAAAACGACAAGACCATTTCGCGGCATG
ATGAGGCGCTGGAGGTTATTCGCGGCCAGAAGCCGTACACAACACAAGGG
TTCGAGCTTTACGACGCGAGTGGAACGAAGCAGCAACGCCACGGGTGTTA
TATCATTTGCGATGGAGGGTACCTCAAGTGGCCCATGATACAGTGTCCCA
TGAAGACGCCAAGTACTGTCGAGGCAGCCGCATTTAGCAAGCAGCAGGAG
AGCTTCCGGAAGGATGTGGAGTGTCTCTTTGTCATCTTGAAGGGCCGCTC
CAGGTTCCGGAAGTCTTCAGTCCTCTACCAGGACAAAGACTTCATCGACG
ATGTTTTCTCCGCGTGCTGCGTCCTGCACAACATTCTACACGCATGGGAT
GGACTGGCGGGGCTGGAGCCTGACACGGACTGATGGCCCATGATACAGTG
TCCCATGAAGACGCCAAGTACTGTCGAGGCAGCCGCATTTAGCAAGCAGC
AGGAGAGCTTCCGGAAGGATGTGGAGTGTCTCTTTGTCATCTTGAAGGGC
CGCTCCAGGTTCCGGAAGTCTTCAGTCCTCTACCAGGACAAAGACTTCAT
CGACGATGTTTTCTCCGCGTGCTGCGTCCTGCACAACATTCTACACGCAT
GGGATGGACTGGCGGGGCTGGAGCCTGACACGGACTGA
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